Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26517.t1 | XP_003607993.2 | 95.5 | 202 | 4 | 1 | 1 | 202 | 1 | 197 | 2.90E-112 | 414.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26517.t1 | B6TZ45 | 64.4 | 135 | 42 | 1 | 69 | 197 | 51 | 185 | 5.6e-48 | 192.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26517.t1 | G7JLA3 | 95.5 | 202 | 4 | 1 | 1 | 202 | 1 | 197 | 2.1e-112 | 414.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene26517 | -0.821706 | 3.50E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene26517 | -0.831608 | 1.52E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene26517 | -0.815655 | 8.27E-52 | -1.69E-46 |
| MS.gene049259 | MS.gene26517 | 0.830568 | 2.73E-55 | -1.69E-46 |
| MS.gene049265 | MS.gene26517 | 0.81082 | 9.53E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene26517 | 0.823813 | 1.13E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene26517 | -0.815999 | 6.93E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene26517 | -0.831152 | 1.96E-55 | -1.69E-46 |
| MS.gene049549 | MS.gene26517 | 0.809862 | 1.53E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene26517 | 0.866835 | 2.13E-65 | -1.69E-46 |
| MS.gene049633 | MS.gene26517 | -0.815987 | 6.98E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene26517 | 0.844894 | 5.70E-59 | -1.69E-46 |
| MS.gene049710 | MS.gene26517 | 0.800963 | 1.13E-48 | -1.69E-46 |
| MS.gene050095 | MS.gene26517 | 0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene050096 | MS.gene26517 | 0.80968 | 1.68E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene26517 | -0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene26517 | -0.811779 | 5.90E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene26517 | -0.80754 | 4.81E-50 | -1.69E-46 |
| MS.gene050173 | MS.gene26517 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene26517 | -0.82826 | 9.92E-55 | -1.69E-46 |
| MS.gene050323 | MS.gene26517 | -0.807702 | 4.44E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene26517 | -0.803446 | 3.47E-49 | -1.69E-46 |
| MS.gene050380 | MS.gene26517 | 0.84711 | 1.42E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene26517 | 0.894565 | 2.19E-75 | -1.69E-46 |
| MS.gene050496 | MS.gene26517 | -0.815198 | 1.05E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene26517 | -0.846424 | 2.19E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene26517 | -0.846032 | 2.80E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene26517 | -0.826619 | 2.46E-54 | -1.69E-46 |
| MS.gene05079 | MS.gene26517 | 0.810115 | 1.35E-50 | -1.69E-46 |
| MS.gene050809 | MS.gene26517 | 0.852623 | 4.09E-61 | -1.69E-46 |
| MS.gene05080 | MS.gene26517 | -0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene050833 | MS.gene26517 | 0.81881 | 1.61E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene26517 | -0.855579 | 5.74E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene26517 | -0.856636 | 2.81E-62 | -1.69E-46 |
| MS.gene050883 | MS.gene26517 | 0.830464 | 2.89E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene26517 | -0.811808 | 5.82E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene26517 | 0.8521 | 5.76E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene26517 | 0.867891 | 9.80E-66 | -1.69E-46 |
| MS.gene051127 | MS.gene26517 | 0.861797 | 7.97E-64 | -1.69E-46 |
| MS.gene051138 | MS.gene26517 | 0.886305 | 3.84E-72 | -1.69E-46 |
| MS.gene051268 | MS.gene26517 | -0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene26517 | 0.811506 | 6.77E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene26517 | 0.802605 | 5.18E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene26517 | 0.827446 | 1.56E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene26517 | -0.809127 | 2.21E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene26517 | -0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene26517 | 0.822684 | 2.08E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene26517 | -0.81059 | 1.07E-50 | -1.69E-46 |
| MS.gene051946 | MS.gene26517 | 0.846007 | 2.85E-59 | -1.69E-46 |
| MS.gene051996 | MS.gene26517 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene26517 | -0.832371 | 9.82E-56 | -1.69E-46 |
| MS.gene052211 | MS.gene26517 | 0.80715 | 5.82E-50 | -1.69E-46 |
| MS.gene05234 | MS.gene26517 | 0.816294 | 5.96E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene26517 | 0.840934 | 6.45E-58 | -1.69E-46 |
| MS.gene05244 | MS.gene26517 | 0.806745 | 7.08E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene26517 | -0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene26517 | -0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene052802 | MS.gene26517 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene052805 | MS.gene26517 | 0.8436 | 1.27E-58 | -1.69E-46 |
| MS.gene053031 | MS.gene26517 | 0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene053069 | MS.gene26517 | 0.817262 | 3.61E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene26517 | -0.823984 | 1.03E-53 | -1.69E-46 |
| MS.gene053403 | MS.gene26517 | 0.80033 | 1.52E-48 | -1.69E-46 |
| MS.gene053406 | MS.gene26517 | 0.801887 | 7.28E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene26517 | 0.899883 | 1.27E-77 | -1.69E-46 |
| MS.gene053479 | MS.gene26517 | -0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene053488 | MS.gene26517 | 0.887963 | 8.98E-73 | -1.69E-46 |
| MS.gene053561 | MS.gene26517 | 0.874923 | 4.62E-68 | -1.69E-46 |
| MS.gene053574 | MS.gene26517 | -0.801718 | 7.89E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene26517 | -0.804548 | 2.05E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene26517 | 0.83409 | 3.66E-56 | -1.69E-46 |
| MS.gene054054 | MS.gene26517 | 0.820587 | 6.34E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene26517 | 0.838297 | 3.13E-57 | -1.69E-46 |
| MS.gene054290 | MS.gene26517 | 0.820227 | 7.67E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene26517 | -0.815894 | 7.31E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene26517 | -0.82391 | 1.07E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene26517 | 0.832693 | 8.17E-56 | -1.69E-46 |
| MS.gene054707 | MS.gene26517 | 0.829543 | 4.85E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene26517 | 0.866584 | 2.56E-65 | -1.69E-46 |
| MS.gene05470 | MS.gene26517 | -0.812324 | 4.49E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene26517 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene26517 | -0.813966 | 1.96E-51 | -1.69E-46 |
| MS.gene054959 | MS.gene26517 | 0.833172 | 6.21E-56 | -1.69E-46 |
| MS.gene055111 | MS.gene26517 | 0.811516 | 6.73E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene26517 | 0.862886 | 3.69E-64 | -1.69E-46 |
| MS.gene055154 | MS.gene26517 | 0.864356 | 1.29E-64 | -1.69E-46 |
| MS.gene055202 | MS.gene26517 | 0.842108 | 3.16E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene26517 | -0.822436 | 2.37E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene26517 | -0.843218 | 1.60E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene26517 | -0.842473 | 2.53E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene26517 | -0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene26517 | -0.807307 | 5.39E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene26517 | -0.809196 | 2.13E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene26517 | -0.825088 | 5.67E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene26517 | 0.839753 | 1.31E-57 | -1.69E-46 |
| MS.gene055959 | MS.gene26517 | 0.829477 | 5.04E-55 | -1.69E-46 |
| MS.gene056218 | MS.gene26517 | 0.800946 | 1.14E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene26517 | 0.850842 | 1.31E-60 | -1.69E-46 |
| MS.gene056310 | MS.gene26517 | 0.811036 | 8.56E-51 | -1.69E-46 |
| MS.gene056311 | MS.gene26517 | 0.825117 | 5.58E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene26517 | 0.841532 | 4.49E-58 | -1.69E-46 |
| MS.gene056359 | MS.gene26517 | 0.828784 | 7.42E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene26517 | -0.838617 | 2.59E-57 | -1.69E-46 |
| MS.gene056510 | MS.gene26517 | -0.801795 | 7.61E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene26517 | 0.813233 | 2.84E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene26517 | 0.813117 | 3.01E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene26517 | -0.823913 | 1.07E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene26517 | 0.882138 | 1.34E-70 | -1.69E-46 |
| MS.gene056857 | MS.gene26517 | 0.816434 | 5.54E-52 | -1.69E-46 |
| MS.gene056920 | MS.gene26517 | 0.809603 | 1.74E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene26517 | 0.840205 | 1.00E-57 | -1.69E-46 |
| MS.gene057261 | MS.gene26517 | 0.807693 | 4.46E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene26517 | 0.821786 | 3.35E-53 | -1.69E-46 |
| MS.gene057548 | MS.gene26517 | 0.81255 | 4.01E-51 | -1.69E-46 |
| MS.gene057549 | MS.gene26517 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene058067 | MS.gene26517 | 0.822804 | 1.95E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene26517 | 0.859697 | 3.46E-63 | -1.69E-46 |
| MS.gene058093 | MS.gene26517 | 0.869871 | 2.24E-66 | -1.69E-46 |
| MS.gene058099 | MS.gene26517 | 0.896593 | 3.18E-76 | -1.69E-46 |
| MS.gene058108 | MS.gene26517 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene26517 | 0.84057 | 8.03E-58 | -1.69E-46 |
| MS.gene058117 | MS.gene26517 | 0.845208 | 4.69E-59 | -1.69E-46 |
| MS.gene058157 | MS.gene26517 | -0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene26517 | 0.862837 | 3.82E-64 | -1.69E-46 |
| MS.gene058173 | MS.gene26517 | 0.851709 | 7.44E-61 | -1.69E-46 |
| MS.gene058175 | MS.gene26517 | 0.86272 | 4.15E-64 | -1.69E-46 |
| MS.gene058177 | MS.gene26517 | 0.803473 | 3.43E-49 | -1.69E-46 |
| MS.gene058179 | MS.gene26517 | 0.815616 | 8.44E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene26517 | 0.847427 | 1.16E-59 | -1.69E-46 |
| MS.gene058269 | MS.gene26517 | 0.85443 | 1.24E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene26517 | -0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene26517 | -0.825723 | 4.01E-54 | -1.69E-46 |
| MS.gene058493 | MS.gene26517 | 0.824799 | 6.64E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene26517 | -0.817437 | 3.30E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene26517 | 0.844009 | 9.86E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene26517 | -0.802916 | 4.47E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene26517 | 0.856163 | 3.87E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene26517 | -0.842858 | 2.00E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene26517 | -0.812205 | 4.77E-51 | -1.69E-46 |
| MS.gene059037 | MS.gene26517 | 0.855537 | 5.90E-62 | -1.69E-46 |
| MS.gene059038 | MS.gene26517 | 0.824972 | 6.04E-54 | -1.69E-46 |
| MS.gene059045 | MS.gene26517 | 0.828324 | 9.58E-55 | -1.69E-46 |
| MS.gene059223 | MS.gene26517 | 0.847714 | 9.71E-60 | -1.69E-46 |
| MS.gene059367 | MS.gene26517 | -0.806635 | 7.48E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene26517 | -0.820151 | 7.98E-53 | -1.69E-46 |
| MS.gene059682 | MS.gene26517 | 0.811718 | 6.09E-51 | -1.69E-46 |
| MS.gene059690 | MS.gene26517 | 0.85002 | 2.22E-60 | -1.69E-46 |
| MS.gene059691 | MS.gene26517 | 0.842359 | 2.71E-58 | -1.69E-46 |
| MS.gene059694 | MS.gene26517 | 0.853791 | 1.89E-61 | -1.69E-46 |
| MS.gene059697 | MS.gene26517 | 0.861731 | 8.35E-64 | -1.69E-46 |
| MS.gene059699 | MS.gene26517 | 0.828285 | 9.79E-55 | -1.69E-46 |
| MS.gene059701 | MS.gene26517 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene26517 | 0.840659 | 7.61E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene26517 | -0.82422 | 9.08E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene26517 | -0.845847 | 3.15E-59 | -1.69E-46 |
| MS.gene059902 | MS.gene26517 | -0.817991 | 2.47E-52 | -1.69E-46 |
| MS.gene059916 | MS.gene26517 | 0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene059944 | MS.gene26517 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene26517 | 0.81214 | 4.92E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene26517 | 0.818406 | 1.99E-52 | -1.69E-46 |
| MS.gene060205 | MS.gene26517 | 0.82596 | 3.52E-54 | -1.69E-46 |
| MS.gene060405 | MS.gene26517 | 0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene26517 | -0.802637 | 5.10E-49 | -1.69E-46 |
| MS.gene060578 | MS.gene26517 | 0.815762 | 7.83E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene26517 | 0.801086 | 1.06E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene26517 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene06074 | MS.gene26517 | 0.849298 | 3.54E-60 | -1.69E-46 |
| MS.gene060762 | MS.gene26517 | -0.825544 | 4.42E-54 | -1.69E-46 |
| MS.gene060778 | MS.gene26517 | -0.814552 | 1.45E-51 | -1.69E-46 |
| MS.gene06077 | MS.gene26517 | -0.837177 | 6.06E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene26517 | -0.816972 | 4.20E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26517.t1 | MTR_4g086330 | 95.545 | 202 | 4 | 1 | 1 | 202 | 1 | 197 | 7.66e-143 | 396 |
| MS.gene26517.t1 | MTR_4g086320 | 96.522 | 115 | 4 | 0 | 64 | 178 | 46 | 160 | 2.42e-80 | 236 |
| MS.gene26517.t1 | MTR_8g104870 | 48.428 | 159 | 75 | 1 | 39 | 190 | 15 | 173 | 2.34e-48 | 156 |
| MS.gene26517.t1 | MTR_5g017650 | 53.968 | 126 | 55 | 1 | 68 | 190 | 51 | 176 | 4.46e-45 | 148 |
| MS.gene26517.t1 | MTR_8g104890 | 49.398 | 166 | 82 | 1 | 39 | 202 | 4 | 169 | 7.95e-45 | 147 |
| MS.gene26517.t1 | MTR_6g084940 | 48.201 | 139 | 70 | 2 | 64 | 202 | 13 | 149 | 4.03e-36 | 124 |
| MS.gene26517.t1 | MTR_1g075550 | 57.143 | 112 | 47 | 1 | 68 | 179 | 11 | 121 | 7.96e-32 | 112 |
| MS.gene26517.t1 | MTR_8g104830 | 42.143 | 140 | 77 | 3 | 67 | 202 | 7 | 146 | 7.35e-30 | 108 |
| MS.gene26517.t1 | MTR_2g101660 | 40.458 | 131 | 78 | 0 | 69 | 199 | 33 | 163 | 3.85e-29 | 107 |
| MS.gene26517.t1 | MTR_5g008240 | 38.356 | 146 | 69 | 5 | 66 | 196 | 104 | 243 | 8.45e-26 | 100 |
| MS.gene26517.t1 | MTR_5g008240 | 38.356 | 146 | 69 | 5 | 66 | 196 | 80 | 219 | 1.10e-25 | 99.4 |
| MS.gene26517.t1 | MTR_5g008240 | 38.356 | 146 | 69 | 5 | 66 | 196 | 38 | 177 | 1.29e-25 | 98.2 |
| MS.gene26517.t1 | MTR_2g101660 | 40.870 | 115 | 68 | 0 | 85 | 199 | 1 | 115 | 8.33e-25 | 94.4 |
| MS.gene26517.t1 | MTR_5g008240 | 37.795 | 127 | 58 | 5 | 85 | 196 | 39 | 159 | 7.21e-18 | 77.4 |
| MS.gene26517.t1 | MTR_7g044840 | 30.370 | 135 | 66 | 3 | 64 | 170 | 55 | 189 | 1.95e-14 | 69.7 |
| MS.gene26517.t1 | MTR_8g075150 | 30.952 | 168 | 103 | 5 | 9 | 172 | 246 | 404 | 1.22e-12 | 66.2 |
| MS.gene26517.t1 | MTR_0172s0050 | 31.056 | 161 | 69 | 5 | 46 | 174 | 50 | 200 | 1.39e-12 | 64.7 |
| MS.gene26517.t1 | MTR_3g408350 | 28.662 | 157 | 73 | 3 | 44 | 171 | 44 | 190 | 3.12e-12 | 63.5 |
| MS.gene26517.t1 | MTR_5g022670 | 35.043 | 117 | 69 | 3 | 59 | 172 | 285 | 397 | 5.76e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26517.t1 | AT1G14870 | 53.623 | 138 | 61 | 2 | 68 | 202 | 15 | 152 | 4.03e-51 | 162 |
| MS.gene26517.t1 | AT5G35525 | 54.348 | 138 | 60 | 2 | 68 | 202 | 15 | 152 | 7.32e-50 | 159 |
| MS.gene26517.t1 | AT3G18470 | 51.493 | 134 | 60 | 1 | 67 | 200 | 3 | 131 | 2.01e-44 | 144 |
| MS.gene26517.t1 | AT1G14870 | 55.455 | 110 | 49 | 0 | 69 | 178 | 16 | 125 | 6.93e-43 | 141 |
| MS.gene26517.t1 | AT1G14880 | 47.826 | 138 | 69 | 2 | 68 | 202 | 14 | 151 | 1.07e-42 | 140 |
| MS.gene26517.t1 | AT1G49030 | 41.414 | 198 | 90 | 5 | 25 | 196 | 21 | 218 | 2.09e-42 | 142 |
| MS.gene26517.t1 | AT3G18460 | 48.819 | 127 | 62 | 2 | 69 | 195 | 54 | 177 | 1.65e-40 | 136 |
| MS.gene26517.t1 | AT1G68610 | 52.349 | 149 | 65 | 3 | 60 | 202 | 10 | 158 | 9.47e-40 | 134 |
| MS.gene26517.t1 | AT3G18450 | 42.636 | 129 | 73 | 1 | 67 | 195 | 50 | 177 | 1.12e-35 | 124 |
| MS.gene26517.t1 | AT1G68630 | 45.890 | 146 | 72 | 3 | 54 | 199 | 19 | 157 | 4.06e-34 | 119 |
| MS.gene26517.t1 | AT1G52200 | 38.961 | 154 | 86 | 2 | 45 | 191 | 30 | 182 | 1.00e-29 | 108 |
| MS.gene26517.t1 | AT1G58320 | 47.445 | 137 | 66 | 5 | 68 | 202 | 16 | 148 | 1.87e-29 | 107 |
| MS.gene26517.t1 | AT1G52200 | 40.845 | 142 | 81 | 2 | 45 | 186 | 30 | 168 | 6.89e-28 | 104 |
| MS.gene26517.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 1.58e-24 | 95.5 |
| MS.gene26517.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 1.58e-24 | 95.5 |
| MS.gene26517.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 1.58e-24 | 95.5 |
| MS.gene26517.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 1.58e-24 | 95.5 |
| MS.gene26517.t1 | AT2G40935 | 36.905 | 168 | 83 | 5 | 22 | 171 | 2 | 164 | 1.58e-24 | 95.5 |
| MS.gene26517.t1 | AT2G40935 | 33.929 | 168 | 77 | 6 | 22 | 171 | 2 | 153 | 2.51e-17 | 76.3 |
| MS.gene26517.t1 | AT2G45010 | 32.143 | 140 | 66 | 2 | 64 | 174 | 11 | 150 | 8.64e-17 | 75.5 |
| MS.gene26517.t1 | AT2G45010 | 32.143 | 140 | 66 | 2 | 64 | 174 | 57 | 196 | 1.02e-16 | 76.3 |
| MS.gene26517.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 7.79e-16 | 72.0 |
| MS.gene26517.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 7.79e-16 | 72.0 |
| MS.gene26517.t1 | AT2G40935 | 36.000 | 150 | 68 | 6 | 40 | 171 | 1 | 140 | 7.79e-16 | 72.0 |
| MS.gene26517.t1 | AT5G51400 | 29.341 | 167 | 80 | 4 | 64 | 201 | 57 | 214 | 9.47e-15 | 70.9 |
Find 58 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGATGGAACCATTTA+TGG | 0.167415 | 4.1:+23463828 | MS.gene26517:CDS |
| TTCTGCCCATGTGTTACTTT+TGG | 0.260194 | 4.1:+23463387 | MS.gene26517:CDS |
| GTTTATATTCATGTTATTAT+CGG | 0.293227 | 4.1:+23463880 | MS.gene26517:CDS |
| CTTGAACTGGTGCTGATATA+TGG | 0.295600 | 4.1:-23463195 | None:intergenic |
| AGCCAGTAGCGCCCCATAAA+TGG | 0.315061 | 4.1:-23463841 | None:intergenic |
| TCTTGGGATGCCCCTTGAAC+TGG | 0.352985 | 4.1:-23463208 | None:intergenic |
| CTTGCCAGAGGCACCTTGTA+TGG | 0.360121 | 4.1:+23463926 | MS.gene26517:CDS |
| ACATGATCTGTTTCACTTAC+GGG | 0.365548 | 4.1:-23463066 | None:intergenic |
| GTCATATTGTGCCCTCAGTT+TGG | 0.371342 | 4.1:-23463904 | None:intergenic |
| GGAGCATAAGGTTGTGAAAC+TGG | 0.373604 | 4.1:-23463171 | None:intergenic |
| GTTGACCAGTGATGTGTTCT+TGG | 0.377366 | 4.1:-23463225 | None:intergenic |
| GGTGGTGCCACTGCAACTCC+TGG | 0.418448 | 4.1:-23464941 | None:intergenic |
| ACACGATCCTTACAGATTCC+AGG | 0.423026 | 4.1:-23463273 | None:intergenic |
| AGAACACATCACTGGTCAAC+TGG | 0.424557 | 4.1:+23463228 | MS.gene26517:CDS |
| TGCCGTTGTCTTGATGATCC+TGG | 0.428665 | 4.1:+23463255 | MS.gene26517:CDS |
| TACATGATCTGTTTCACTTA+CGG | 0.430083 | 4.1:-23463067 | None:intergenic |
| CTGATATATGGAGGAGCATA+AGG | 0.431906 | 4.1:-23463183 | None:intergenic |
| AACCATTTATGGGGCGCTAC+TGG | 0.441904 | 4.1:+23463839 | MS.gene26517:CDS |
| CAATCCATACAAGGTGCCTC+TGG | 0.468885 | 4.1:-23463930 | None:intergenic |
| TTGACCAGTGATGTGTTCTT+GGG | 0.472581 | 4.1:-23463224 | None:intergenic |
| GGGGCGCTACTGGCTGTGTC+GGG | 0.479808 | 4.1:+23463849 | MS.gene26517:CDS |
| TGGGGCGCTACTGGCTGTGT+CGG | 0.483383 | 4.1:+23463848 | MS.gene26517:CDS |
| CTTGTCATAGGTGAAATCAT+TGG | 0.483757 | 4.1:-23464962 | None:intergenic |
| CTTGTGATGGAACCATTTAT+GGG | 0.487235 | 4.1:+23463829 | MS.gene26517:CDS |
| GTCCTACAAATGCCAAGTTA+TGG | 0.492297 | 4.1:+23463144 | MS.gene26517:CDS |
| TGCCATAACTTGGCATTTGT+AGG | 0.492803 | 4.1:-23463146 | None:intergenic |
| CATATATCAGCACCAGTTCA+AGG | 0.493929 | 4.1:+23463196 | MS.gene26517:CDS |
| GGGAGGATACATAATGTTGT+TGG | 0.511787 | 4.1:-23463046 | None:intergenic |
| GGACATAGCCTTGACCTTGA+GGG | 0.520075 | 4.1:-23463125 | None:intergenic |
| GAAACTGGCATGCCATAACT+TGG | 0.522579 | 4.1:-23463156 | None:intergenic |
| TGGCCTCTGTCTTTCCACGT+TGG | 0.547801 | 4.1:-23464921 | None:intergenic |
| TATGCAGATCATAGTAGTCA+TGG | 0.562595 | 4.1:+23463090 | MS.gene26517:CDS |
| AGGATACATAATGTTGTTGG+TGG | 0.565615 | 4.1:-23463043 | None:intergenic |
| ATATATCAGCACCAGTTCAA+GGG | 0.567137 | 4.1:+23463197 | MS.gene26517:CDS |
| ACAGAGGCCAGGAGTTGCAG+TGG | 0.578607 | 4.1:+23464934 | MS.gene26517:CDS |
| AACGTGGAAAGACAGAGGCC+AGG | 0.580413 | 4.1:+23464923 | MS.gene26517:CDS |
| AGGACATAGCCTTGACCTTG+AGG | 0.581870 | 4.1:-23463126 | None:intergenic |
| GACATAGCCTTGACCTTGAG+GGG | 0.583468 | 4.1:-23463124 | None:intergenic |
| GTTATTATCGGTCCAAACTG+AGG | 0.587553 | 4.1:+23463892 | MS.gene26517:CDS |
| TATGCAGCTTGCACTTGTGA+TGG | 0.588927 | 4.1:+23463816 | MS.gene26517:intron |
| CGTGGATATGACTTGAGCAT+AGG | 0.597514 | 4.1:+23464014 | MS.gene26517:CDS |
| TTATTATCGGTCCAAACTGA+GGG | 0.608761 | 4.1:+23463893 | MS.gene26517:CDS |
| ATCAATCCAAAAGTAACACA+TGG | 0.609342 | 4.1:-23463393 | None:intergenic |
| GTCATAGGTGAAATCATTGG+TGG | 0.613790 | 4.1:-23464959 | None:intergenic |
| GCATCCCAAGAACACATCAC+TGG | 0.621240 | 4.1:+23463220 | MS.gene26517:CDS |
| TATATCAGCACCAGTTCAAG+GGG | 0.623123 | 4.1:+23463198 | MS.gene26517:CDS |
| TTGTGATGGAACCATTTATG+GGG | 0.625239 | 4.1:+23463830 | MS.gene26517:CDS |
| TGAACTAAACAATCCATACA+AGG | 0.640319 | 4.1:-23463939 | None:intergenic |
| CTATGCTCAAGTCATATCCA+CGG | 0.662249 | 4.1:-23464013 | None:intergenic |
| TTCCAGGATCATCAAGACAA+CGG | 0.663060 | 4.1:-23463257 | None:intergenic |
| TGATCTGTTTCACTTACGGG+AGG | 0.664833 | 4.1:-23463063 | None:intergenic |
| ATAGCAGAGATAGTAGACAA+AGG | 0.671471 | 4.1:+23463414 | MS.gene26517:CDS |
| TATAGGTTGGGATGCCAACG+TGG | 0.683467 | 4.1:+23464907 | MS.gene26517:intron |
| ACATAGCCTTGACCTTGAGG+GGG | 0.690202 | 4.1:-23463123 | None:intergenic |
| TCAATCCAAAAGTAACACAT+GGG | 0.696087 | 4.1:-23463392 | None:intergenic |
| ATGCCAACGTGGAAAGACAG+AGG | 0.696902 | 4.1:+23464918 | MS.gene26517:CDS |
| GAACTGGTGCTGATATATGG+AGG | 0.713639 | 4.1:-23463192 | None:intergenic |
| GGCACAATATGACTTGCCAG+AGG | 0.740534 | 4.1:+23463914 | MS.gene26517:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATGAAATTAAGTTAA+GGG | + | chr4.1:23463737-23463756 | MS.gene26517:intron | 10.0% |
| !! | AAATGTTGGATATATAAAAT+AGG | + | chr4.1:23464199-23464218 | MS.gene26517:intron | 15.0% |
| !! | CATTAAATGAAATTAAGTTA+AGG | + | chr4.1:23463736-23463755 | MS.gene26517:intron | 15.0% |
| !! | GTTTATATTCATGTTATTAT+CGG | + | chr4.1:23463880-23463899 | MS.gene26517:CDS | 15.0% |
| !!! | AATATATGTGTTTTAAAGAA+AGG | - | chr4.1:23463316-23463335 | None:intergenic | 15.0% |
| !!! | CAAATTATTTATCATGTTTT+TGG | + | chr4.1:23463791-23463810 | MS.gene26517:intron | 15.0% |
| !!! | CATTTTATTTTTCTATTTGT+TGG | - | chr4.1:23464519-23464538 | None:intergenic | 15.0% |
| !!! | CTAATATTTTTATCTTAGTA+AGG | - | chr4.1:23464604-23464623 | None:intergenic | 15.0% |
| !!! | CTTAATTTCATTTAATGTTT+TGG | - | chr4.1:23463733-23463752 | None:intergenic | 15.0% |
| !!! | TAAGCTTTTACATAAAATAT+AGG | + | chr4.1:23463450-23463469 | MS.gene26517:intron | 15.0% |
| !!! | TCTTTAAAACACATATATTA+TGG | + | chr4.1:23463317-23463336 | MS.gene26517:intron | 15.0% |
| !!! | TTTTTCTTTTCTAATTGATA+AGG | + | chr4.1:23463351-23463370 | MS.gene26517:intron | 15.0% |
| !! | AAGTATTTGAAGAAAGAATT+AGG | - | chr4.1:23464042-23464061 | None:intergenic | 20.0% |
| !! | ACATGAAAAAAAGATACAAA+AGG | - | chr4.1:23463524-23463543 | None:intergenic | 20.0% |
| !!! | ATCTTTTTTTCATGTCATTT+TGG | + | chr4.1:23463529-23463548 | MS.gene26517:intron | 20.0% |
| ! | CTTGAAAATTCATATGCAAA+CGG | + | chr4.1:23463668-23463687 | MS.gene26517:intron | 25.0% |
| ! | TCTATGTTAGATCCTATTAT+AGG | + | chr4.1:23464386-23464405 | MS.gene26517:intron | 25.0% |
| ! | TTTATGCAAAATTAAACCAG+TGG | - | chr4.1:23463764-23463783 | None:intergenic | 25.0% |
| !! | CTTTTCTAATTGATAAGGTT+TGG | + | chr4.1:23463356-23463375 | MS.gene26517:intron | 25.0% |
| !! | TTTAATTTCAAGTGACGTTT+AGG | + | chr4.1:23463498-23463517 | MS.gene26517:intron | 25.0% |
| !! | TTTATTTACCTATGACTTGT+CGG | + | chr4.1:23463591-23463610 | MS.gene26517:intron | 25.0% |
| !!! | ATTTTCAAGCTTCAAATCTA+TGG | + | chr4.1:23463567-23463586 | MS.gene26517:intron | 25.0% |
| !!! | TTACATTTTTGAGGTATTGA+AGG | + | chr4.1:23464792-23464811 | MS.gene26517:intron | 25.0% |
| AGTTGTCAAAAACAAGTCAA+GGG | - | chr4.1:23464873-23464892 | None:intergenic | 30.0% | |
| ATCAATCCAAAAGTAACACA+TGG | - | chr4.1:23463396-23463415 | None:intergenic | 30.0% | |
| TACATGATCTGTTTCACTTA+CGG | - | chr4.1:23463070-23463089 | None:intergenic | 30.0% | |
| TAGTTGTCAAAAACAAGTCA+AGG | - | chr4.1:23464874-23464893 | None:intergenic | 30.0% | |
| TCAATCCAAAAGTAACACAT+GGG | - | chr4.1:23463395-23463414 | None:intergenic | 30.0% | |
| TCATGTTCATATGCAAACAT+GGG | - | chr4.1:23463639-23463658 | None:intergenic | 30.0% | |
| TCTCATATCATTTATCAACG+AGG | + | chr4.1:23464462-23464481 | MS.gene26517:intron | 30.0% | |
| TCTGTGATTGGATAAAATGT+TGG | + | chr4.1:23464185-23464204 | MS.gene26517:intron | 30.0% | |
| TGAACTAAACAATCCATACA+AGG | - | chr4.1:23463942-23463961 | None:intergenic | 30.0% | |
| TTGAGATGAGGAAACATTAT+TGG | + | chr4.1:23464108-23464127 | MS.gene26517:intron | 30.0% | |
| ! | ACCTAAAACCTTAAGGTATT+GGG | - | chr4.1:23464237-23464256 | None:intergenic | 30.0% |
| ! | ACTAACTGAGTCTGAAATAT+AGG | + | chr4.1:23464890-23464909 | MS.gene26517:intron | 30.0% |
| ! | ATCTAGTTGAAGTTTGTTCA+AGG | - | chr4.1:23464661-23464680 | None:intergenic | 30.0% |
| !! | AGCTTTTTCTCACGTAATTT+TGG | - | chr4.1:23463704-23463723 | None:intergenic | 30.0% |
| !! | GCTTTTTCTCACGTAATTTT+GGG | - | chr4.1:23463703-23463722 | None:intergenic | 30.0% |
| !! | GGTTCTAACTTACATTTTTG+AGG | + | chr4.1:23464783-23464802 | MS.gene26517:intron | 30.0% |
| AAATTAAGTTAAGGGACCAC+TGG | + | chr4.1:23463745-23463764 | MS.gene26517:intron | 35.0% | |
| AATGTTTCCTCATCTCAAAC+CGG | - | chr4.1:23464106-23464125 | None:intergenic | 35.0% | |
| AATTAAGAAAGCAGAGATCC+TGG | - | chr4.1:23464743-23464762 | None:intergenic | 35.0% | |
| ACATGATCTGTTTCACTTAC+GGG | - | chr4.1:23463069-23463088 | None:intergenic | 35.0% | |
| AGCTTGCACTTAATACTAAC+CGG | + | chr4.1:23464625-23464644 | MS.gene26517:intron | 35.0% | |
| AGGATACATAATGTTGTTGG+TGG | - | chr4.1:23463046-23463065 | None:intergenic | 35.0% | |
| ATAGCAGAGATAGTAGACAA+AGG | + | chr4.1:23463414-23463433 | MS.gene26517:CDS | 35.0% | |
| ATATATCAGCACCAGTTCAA+GGG | + | chr4.1:23463197-23463216 | MS.gene26517:CDS | 35.0% | |
| ATGTTGAGTTCAGATGTAAG+TGG | + | chr4.1:23464147-23464166 | MS.gene26517:intron | 35.0% | |
| ATTAAGAAAGCAGAGATCCT+GGG | - | chr4.1:23464742-23464761 | None:intergenic | 35.0% | |
| CACCTAAAACCTTAAGGTAT+TGG | - | chr4.1:23464238-23464257 | None:intergenic | 35.0% | |
| CCATATAACCCAATACCTTA+AGG | + | chr4.1:23464226-23464245 | MS.gene26517:intron | 35.0% | |
| CTCATGTTCATATGCAAACA+TGG | - | chr4.1:23463640-23463659 | None:intergenic | 35.0% | |
| CTTGTCATAGGTGAAATCAT+TGG | - | chr4.1:23464965-23464984 | None:intergenic | 35.0% | |
| TAGATCCTATTATAGGACGT+GGG | + | chr4.1:23464393-23464412 | MS.gene26517:intron | 35.0% | |
| TATGCAGATCATAGTAGTCA+TGG | + | chr4.1:23463090-23463109 | MS.gene26517:CDS | 35.0% | |
| TTAGATCCTATTATAGGACG+TGG | + | chr4.1:23464392-23464411 | MS.gene26517:intron | 35.0% | |
| TTATTATCGGTCCAAACTGA+GGG | + | chr4.1:23463893-23463912 | MS.gene26517:CDS | 35.0% | |
| TTGTTGGATTAAAGTGTGAG+TGG | + | chr4.1:23464434-23464453 | MS.gene26517:intron | 35.0% | |
| ! | ACCCAATACCTTAAGGTTTT+AGG | + | chr4.1:23464233-23464252 | MS.gene26517:intron | 35.0% |
| ! | ACTGAGTCTGAAATATAGGT+TGG | + | chr4.1:23464894-23464913 | MS.gene26517:intron | 35.0% |
| ! | ACTTGTGATGGAACCATTTA+TGG | + | chr4.1:23463828-23463847 | MS.gene26517:CDS | 35.0% |
| ! | ATTTTTGCCAGTTTCCAAGT+TGG | + | chr4.1:23464760-23464779 | MS.gene26517:intron | 35.0% |
| ! | CTGAGTCTGAAATATAGGTT+GGG | + | chr4.1:23464895-23464914 | MS.gene26517:intron | 35.0% |
| ! | CTTGTGATGGAACCATTTAT+GGG | + | chr4.1:23463829-23463848 | MS.gene26517:CDS | 35.0% |
| ! | TTGTGATGGAACCATTTATG+GGG | + | chr4.1:23463830-23463849 | MS.gene26517:CDS | 35.0% |
| ! | TTTTTGCCAGTTTCCAAGTT+GGG | + | chr4.1:23464761-23464780 | MS.gene26517:intron | 35.0% |
| !! | CCTTAAGGTATTGGGTTATA+TGG | - | chr4.1:23464229-23464248 | None:intergenic | 35.0% |
| !!! | CAATACCTTAAGGTTTTAGG+TGG | + | chr4.1:23464236-23464255 | MS.gene26517:intron | 35.0% |
| AAGGATCTGATACCACTTGT+CGG | - | chr4.1:23464334-23464353 | None:intergenic | 40.0% | |
| AGATCTCTTAAGCAATGTCC+CGG | + | chr4.1:23464084-23464103 | MS.gene26517:intron | 40.0% | |
| ATGTTTCCTCATCTCAAACC+GGG | - | chr4.1:23464105-23464124 | None:intergenic | 40.0% | |
| CATATATCAGCACCAGTTCA+AGG | + | chr4.1:23463196-23463215 | MS.gene26517:CDS | 40.0% | |
| CATCTCCACCTAAAACCTTA+AGG | - | chr4.1:23464244-23464263 | None:intergenic | 40.0% | |
| CCAACTAAAAGTGATCAGTG+AGG | + | chr4.1:23464713-23464732 | MS.gene26517:intron | 40.0% | |
| CTATGCTCAAGTCATATCCA+CGG | - | chr4.1:23464016-23464035 | None:intergenic | 40.0% | |
| CTTGTCGGTCTTCAAATCTA+TGG | + | chr4.1:23463606-23463625 | MS.gene26517:intron | 40.0% | |
| GGGAGGATACATAATGTTGT+TGG | - | chr4.1:23463049-23463068 | None:intergenic | 40.0% | |
| GTCATAGGTGAAATCATTGG+TGG | - | chr4.1:23464962-23464981 | None:intergenic | 40.0% | |
| GTCCTACAAATGCCAAGTTA+TGG | + | chr4.1:23463144-23463163 | MS.gene26517:CDS | 40.0% | |
| GTTATTATCGGTCCAAACTG+AGG | + | chr4.1:23463892-23463911 | MS.gene26517:CDS | 40.0% | |
| TATAGAGAGCTCAAAAACCG+TGG | + | chr4.1:23463996-23464015 | MS.gene26517:CDS | 40.0% | |
| TATATCAGCACCAGTTCAAG+GGG | + | chr4.1:23463198-23463217 | MS.gene26517:CDS | 40.0% | |
| TGATGATCCTGGAATCTGTA+AGG | + | chr4.1:23463266-23463285 | MS.gene26517:intron | 40.0% | |
| TGCCATAACTTGGCATTTGT+AGG | - | chr4.1:23463149-23463168 | None:intergenic | 40.0% | |
| TGTAAGTTAGAACCCCAACT+TGG | - | chr4.1:23464777-23464796 | None:intergenic | 40.0% | |
| TGTTTCCCACGTCCTATAAT+AGG | - | chr4.1:23464401-23464420 | None:intergenic | 40.0% | |
| TTCCAGGATCATCAAGACAA+CGG | - | chr4.1:23463260-23463279 | None:intergenic | 40.0% | |
| TTGACCAGTGATGTGTTCTT+GGG | - | chr4.1:23463227-23463246 | None:intergenic | 40.0% | |
| TTTGAAGACCGACAAGTCAT+AGG | - | chr4.1:23463602-23463621 | None:intergenic | 40.0% | |
| ! | CTGATATATGGAGGAGCATA+AGG | - | chr4.1:23463186-23463205 | None:intergenic | 40.0% |
| ! | TCACGTAATTTTGGGCCTTT+CGG | - | chr4.1:23463695-23463714 | None:intergenic | 40.0% |
| ! | TTTTGCCAGTTTCCAAGTTG+GGG | + | chr4.1:23464762-23464781 | MS.gene26517:intron | 40.0% |
| !! | CCTCACTGATCACTTTTAGT+TGG | - | chr4.1:23464716-23464735 | None:intergenic | 40.0% |
| !! | CTTGAACTGGTGCTGATATA+TGG | - | chr4.1:23463198-23463217 | None:intergenic | 40.0% |
| !!! | TAAGGTTTTAGGTGGAGATG+TGG | + | chr4.1:23464244-23464263 | MS.gene26517:intron | 40.0% |
| !!! | TTCTGCCCATGTGTTACTTT+TGG | + | chr4.1:23463387-23463406 | MS.gene26517:CDS | 40.0% |
| ACAACGGACAAAATGCTCCA+AGG | - | chr4.1:23464288-23464307 | None:intergenic | 45.0% | |
| ACACGATCCTTACAGATTCC+AGG | - | chr4.1:23463276-23463295 | None:intergenic | 45.0% | |
| ACACTTGAGGGAGAGATTGT+TGG | + | chr4.1:23464418-23464437 | MS.gene26517:intron | 45.0% | |
| ACCACTTGTCGGAAAATCCA+AGG | - | chr4.1:23464323-23464342 | None:intergenic | 45.0% | |
| AGAACACATCACTGGTCAAC+TGG | + | chr4.1:23463228-23463247 | MS.gene26517:CDS | 45.0% | |
| AGTCTCACATCGTCTGTGAT+TGG | + | chr4.1:23464173-23464192 | MS.gene26517:intron | 45.0% | |
| CGTGGATATGACTTGAGCAT+AGG | + | chr4.1:23464014-23464033 | MS.gene26517:CDS | 45.0% | |
| GAAACTGGCATGCCATAACT+TGG | - | chr4.1:23463159-23463178 | None:intergenic | 45.0% | |
| GACAAGTGGTATCAGATCCT+TGG | + | chr4.1:23464333-23464352 | MS.gene26517:intron | 45.0% | |
| GGAGCATAAGGTTGTGAAAC+TGG | - | chr4.1:23463174-23463193 | None:intergenic | 45.0% | |
| GTCATATTGTGCCCTCAGTT+TGG | - | chr4.1:23463907-23463926 | None:intergenic | 45.0% | |
| GTCGGAAAATCCAAGGAAGT+CGG | - | chr4.1:23464316-23464335 | None:intergenic | 45.0% | |
| GTTGACCAGTGATGTGTTCT+TGG | - | chr4.1:23463228-23463247 | None:intergenic | 45.0% | |
| TAGAACCCCAACTTGGAAAC+TGG | - | chr4.1:23464770-23464789 | None:intergenic | 45.0% | |
| TATGCAGCTTGCACTTGTGA+TGG | + | chr4.1:23463816-23463835 | MS.gene26517:intron | 45.0% | |
| TCATATGCAAACGGACCGAA+AGG | + | chr4.1:23463677-23463696 | MS.gene26517:intron | 45.0% | |
| TCGGAAAATCCAAGGAAGTC+GGG | - | chr4.1:23464315-23464334 | None:intergenic | 45.0% | |
| TGATCTGTTTCACTTACGGG+AGG | - | chr4.1:23463066-23463085 | None:intergenic | 45.0% | |
| TGTGGTATCTCCCTTTCTTG+TGG | + | chr4.1:23464262-23464281 | MS.gene26517:intron | 45.0% | |
| TGTTCAAGGTAGTCACAAGC+CGG | - | chr4.1:23464647-23464666 | None:intergenic | 45.0% | |
| ! | TCCTTGGATTTTCCGACAAG+TGG | + | chr4.1:23464319-23464338 | MS.gene26517:intron | 45.0% |
| !! | GAACTGGTGCTGATATATGG+AGG | - | chr4.1:23463195-23463214 | None:intergenic | 45.0% |
| AAGGAAGTCGGGAGCAACAA+CGG | - | chr4.1:23464304-23464323 | None:intergenic | 50.0% | |
| AGGACGTGGGAAACACTTGA+GGG | + | chr4.1:23464406-23464425 | MS.gene26517:intron | 50.0% | |
| AGTGATCAGTGAGGTTACCC+AGG | + | chr4.1:23464722-23464741 | MS.gene26517:intron | 50.0% | |
| ATCTCCCTTTCTTGTGGCCT+TGG | + | chr4.1:23464268-23464287 | MS.gene26517:intron | 50.0% | |
| ATGCCAACGTGGAAAGACAG+AGG | + | chr4.1:23464918-23464937 | MS.gene26517:CDS | 50.0% | |
| ATGCTCCAAGGCCACAAGAA+AGG | - | chr4.1:23464276-23464295 | None:intergenic | 50.0% | |
| GCATCCCAAGAACACATCAC+TGG | + | chr4.1:23463220-23463239 | MS.gene26517:CDS | 50.0% | |
| TAGGACGTGGGAAACACTTG+AGG | + | chr4.1:23464405-23464424 | MS.gene26517:intron | 50.0% | |
| TGCTCCAAGGCCACAAGAAA+GGG | - | chr4.1:23464275-23464294 | None:intergenic | 50.0% | |
| ! | AACCATTTATGGGGCGCTAC+TGG | + | chr4.1:23463839-23463858 | MS.gene26517:CDS | 50.0% |
| ! | ACATAGCCTTGACCTTGAGG+GGG | - | chr4.1:23463126-23463145 | None:intergenic | 50.0% |
| ! | AGGACATAGCCTTGACCTTG+AGG | - | chr4.1:23463129-23463148 | None:intergenic | 50.0% |
| ! | ATCAGATCCTTGGTTCGCCT+TGG | + | chr4.1:23464343-23464362 | MS.gene26517:intron | 50.0% |
| ! | ATCCTTGGTTCGCCTTGGTA+GGG | + | chr4.1:23464348-23464367 | MS.gene26517:intron | 50.0% |
| ! | CAATCCATACAAGGTGCCTC+TGG | - | chr4.1:23463933-23463952 | None:intergenic | 50.0% |
| ! | CAATGTCCCGGTTTGAGATG+AGG | + | chr4.1:23464096-23464115 | MS.gene26517:intron | 50.0% |
| ! | GACATAGCCTTGACCTTGAG+GGG | - | chr4.1:23463127-23463146 | None:intergenic | 50.0% |
| ! | GGACATAGCCTTGACCTTGA+GGG | - | chr4.1:23463128-23463147 | None:intergenic | 50.0% |
| ! | GGCACAATATGACTTGCCAG+AGG | + | chr4.1:23463914-23463933 | MS.gene26517:CDS | 50.0% |
| ! | TATAGGTTGGGATGCCAACG+TGG | + | chr4.1:23464907-23464926 | MS.gene26517:intron | 50.0% |
| ! | TGCCGTTGTCTTGATGATCC+TGG | + | chr4.1:23463255-23463274 | MS.gene26517:CDS | 50.0% |
| !! | GGACTCTGAAGCACAAGAGA+GGG | - | chr4.1:23464498-23464517 | None:intergenic | 50.0% |
| !! | TGGACTCTGAAGCACAAGAG+AGG | - | chr4.1:23464499-23464518 | None:intergenic | 50.0% |
| AACGTGGAAAGACAGAGGCC+AGG | + | chr4.1:23464923-23464942 | MS.gene26517:CDS | 55.0% | |
| AGCCAGTAGCGCCCCATAAA+TGG | - | chr4.1:23463844-23463863 | None:intergenic | 55.0% | |
| CAACTCTCACTCCCCTACCA+AGG | - | chr4.1:23464363-23464382 | None:intergenic | 55.0% | |
| CTTGGTAGGGGAGTGAGAGT+TGG | + | chr4.1:23464361-23464380 | MS.gene26517:intron | 55.0% | |
| GTTGTTGCTCCCGACTTCCT+TGG | + | chr4.1:23464303-23464322 | MS.gene26517:intron | 55.0% | |
| TCTTGGGATGCCCCTTGAAC+TGG | - | chr4.1:23463211-23463230 | None:intergenic | 55.0% | |
| TGGCCTCTGTCTTTCCACGT+TGG | - | chr4.1:23464924-23464943 | None:intergenic | 55.0% | |
| ! | GATCCTTGGTTCGCCTTGGT+AGG | + | chr4.1:23464347-23464366 | MS.gene26517:intron | 55.0% |
| ! | TCCTTGGTTCGCCTTGGTAG+GGG | + | chr4.1:23464349-23464368 | MS.gene26517:intron | 55.0% |
| !! | CTTGCCAGAGGCACCTTGTA+TGG | + | chr4.1:23463926-23463945 | MS.gene26517:CDS | 55.0% |
| ACAGAGGCCAGGAGTTGCAG+TGG | + | chr4.1:23464934-23464953 | MS.gene26517:CDS | 60.0% | |
| AGCCATCCCCCTCAAGGTCA+AGG | + | chr4.1:23463117-23463136 | MS.gene26517:CDS | 60.0% | |
| AGCCTTGACCTTGAGGGGGA+TGG | - | chr4.1:23463122-23463141 | None:intergenic | 60.0% | |
| GACCTTGAGGGGGATGGCTA+TGG | - | chr4.1:23463116-23463135 | None:intergenic | 60.0% | |
| TCCCCTACCAAGGCGAACCA+AGG | - | chr4.1:23464353-23464372 | None:intergenic | 60.0% | |
| GGCCATAGCCATCCCCCTCA+AGG | + | chr4.1:23463111-23463130 | MS.gene26517:CDS | 65.0% | |
| ! | TGGGGCGCTACTGGCTGTGT+CGG | + | chr4.1:23463848-23463867 | MS.gene26517:CDS | 65.0% |
| !! | GGTGGTGCCACTGCAACTCC+TGG | - | chr4.1:23464944-23464963 | None:intergenic | 65.0% |
| ! | GGGGCGCTACTGGCTGTGTC+GGG | + | chr4.1:23463849-23463868 | MS.gene26517:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 23463036 | 23464988 | 23463036 | ID=MS.gene26517 |
| chr4.1 | mRNA | 23463036 | 23464988 | 23463036 | ID=MS.gene26517.t1;Parent=MS.gene26517 |
| chr4.1 | exon | 23463036 | 23463282 | 23463036 | ID=MS.gene26517.t1.exon1;Parent=MS.gene26517.t1 |
| chr4.1 | CDS | 23463036 | 23463282 | 23463036 | ID=cds.MS.gene26517.t1;Parent=MS.gene26517.t1 |
| chr4.1 | exon | 23463373 | 23463444 | 23463373 | ID=MS.gene26517.t1.exon2;Parent=MS.gene26517.t1 |
| chr4.1 | CDS | 23463373 | 23463444 | 23463373 | ID=cds.MS.gene26517.t1;Parent=MS.gene26517.t1 |
| chr4.1 | exon | 23463823 | 23464035 | 23463823 | ID=MS.gene26517.t1.exon3;Parent=MS.gene26517.t1 |
| chr4.1 | CDS | 23463823 | 23464035 | 23463823 | ID=cds.MS.gene26517.t1;Parent=MS.gene26517.t1 |
| chr4.1 | exon | 23464912 | 23464988 | 23464912 | ID=MS.gene26517.t1.exon4;Parent=MS.gene26517.t1 |
| chr4.1 | CDS | 23464912 | 23464988 | 23464912 | ID=cds.MS.gene26517.t1;Parent=MS.gene26517.t1 |
| Gene Sequence |
| Protein sequence |
