AlfalfaGEDB | MS.gene29146

M. sativa cultivar XinJiangDaYe / MS.gene29146

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0097159 GO:1901363
PFAM: PF04770.15

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29146.t1	XP_003613092.2	96.9	256	3	2	1	251	17	272	2.40E-92	348.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29146.t1	A2Z259	47.2	229	93	3	50	250	49	277	2.7e-47	190.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29146.t1	G7JXR5	96.9	256	3	2	1	251	17	272	1.8e-92	348.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene29146.t1	TF	zf-HD

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene29146	0.82138	4.16E-53	-1.69E-46
MS.gene049151	MS.gene29146	0.827128	1.86E-54	-1.69E-46
MS.gene049153	MS.gene29146	0.80235	5.85E-49	-1.69E-46
MS.gene049260	MS.gene29146	0.884476	1.86E-71	-1.69E-46
MS.gene049758	MS.gene29146	0.874767	5.22E-68	-1.69E-46
MS.gene050020	MS.gene29146	0.83386	4.18E-56	-1.69E-46
MS.gene050099	MS.gene29146	0.802286	6.03E-49	-1.69E-46
MS.gene050128	MS.gene29146	0.874538	6.24E-68	-1.69E-46
MS.gene050301	MS.gene29146	0.845288	4.46E-59	-1.69E-46
MS.gene050516	MS.gene29146	0.823547	1.31E-53	-1.69E-46
MS.gene050558	MS.gene29146	0.809984	1.44E-50	-1.69E-46
MS.gene050584	MS.gene29146	0.816938	4.27E-52	-1.69E-46
MS.gene050586	MS.gene29146	0.816	6.93E-52	-1.69E-46
MS.gene050762	MS.gene29146	0.802994	4.31E-49	-1.69E-46
MS.gene050763	MS.gene29146	0.804324	2.28E-49	-1.69E-46
MS.gene050815	MS.gene29146	0.805157	1.53E-49	-1.69E-46
MS.gene051487	MS.gene29146	0.829292	5.59E-55	-1.69E-46
MS.gene051626	MS.gene29146	0.814251	1.69E-51	-1.69E-46
MS.gene051662	MS.gene29146	0.822784	1.97E-53	-1.69E-46
MS.gene051663	MS.gene29146	0.840957	6.36E-58	-1.69E-46
MS.gene051789	MS.gene29146	0.875448	3.06E-68	-1.69E-46
MS.gene051860	MS.gene29146	0.832155	1.11E-55	-1.69E-46
MS.gene052078	MS.gene29146	0.812242	4.68E-51	-1.69E-46
MS.gene052178	MS.gene29146	0.879189	1.53E-69	-1.69E-46
MS.gene052207	MS.gene29146	0.82508	5.70E-54	-1.69E-46
MS.gene052287	MS.gene29146	0.812919	3.33E-51	-1.69E-46
MS.gene052917	MS.gene29146	-0.812252	4.66E-51	-1.69E-46
MS.gene052967	MS.gene29146	0.835781	1.37E-56	-1.69E-46
MS.gene053074	MS.gene29146	0.859486	4.00E-63	-1.69E-46
MS.gene053204	MS.gene29146	0.831813	1.35E-55	-1.69E-46
MS.gene053557	MS.gene29146	0.806085	9.76E-50	-1.69E-46
MS.gene053630	MS.gene29146	0.820988	5.13E-53	-1.69E-46
MS.gene053836	MS.gene29146	0.846328	2.33E-59	-1.69E-46
MS.gene054010	MS.gene29146	0.832216	1.07E-55	-1.69E-46
MS.gene054011	MS.gene29146	0.839713	1.34E-57	-1.69E-46
MS.gene054012	MS.gene29146	0.832935	7.12E-56	-1.69E-46
MS.gene054013	MS.gene29146	0.826664	2.40E-54	-1.69E-46
MS.gene054184	MS.gene29146	0.853457	2.36E-61	-1.69E-46
MS.gene054185	MS.gene29146	0.850974	1.20E-60	-1.69E-46
MS.gene054214	MS.gene29146	0.861298	1.13E-63	-1.69E-46
MS.gene054473	MS.gene29146	0.820857	5.49E-53	-1.69E-46
MS.gene05456	MS.gene29146	0.815215	1.04E-51	-1.69E-46
MS.gene054596	MS.gene29146	0.848022	7.99E-60	-1.69E-46
MS.gene054618	MS.gene29146	0.829366	5.36E-55	-1.69E-46
MS.gene054942	MS.gene29146	0.802475	5.51E-49	-1.69E-46
MS.gene055133	MS.gene29146	0.844051	9.61E-59	-1.69E-46
MS.gene055207	MS.gene29146	0.83971	1.35E-57	-1.69E-46
MS.gene055277	MS.gene29146	0.822998	1.75E-53	-1.69E-46
MS.gene055303	MS.gene29146	0.809312	2.01E-50	-1.69E-46
MS.gene055390	MS.gene29146	0.829942	3.88E-55	-1.69E-46
MS.gene055422	MS.gene29146	0.84447	7.41E-59	-1.69E-46
MS.gene055428	MS.gene29146	0.822556	2.22E-53	-1.69E-46
MS.gene055604	MS.gene29146	0.865929	4.13E-65	-1.69E-46
MS.gene055712	MS.gene29146	0.807739	4.36E-50	-1.69E-46
MS.gene056069	MS.gene29146	-0.844597	6.85E-59	-1.69E-46
MS.gene056612	MS.gene29146	0.800219	1.60E-48	-1.69E-46
MS.gene056629	MS.gene29146	0.807103	5.95E-50	-1.69E-46
MS.gene056772	MS.gene29146	0.818185	2.24E-52	-1.69E-46
MS.gene056875	MS.gene29146	0.813149	2.96E-51	-1.69E-46
MS.gene056902	MS.gene29146	0.817017	4.10E-52	-1.69E-46
MS.gene056931	MS.gene29146	0.807696	4.46E-50	-1.69E-46
MS.gene056933	MS.gene29146	0.807124	5.89E-50	-1.69E-46
MS.gene057121	MS.gene29146	0.816499	5.36E-52	-1.69E-46
MS.gene057260	MS.gene29146	0.826286	2.95E-54	-1.69E-46
MS.gene057439	MS.gene29146	0.840005	1.13E-57	-1.69E-46
MS.gene057450	MS.gene29146	0.802307	5.97E-49	-1.69E-46
MS.gene057469	MS.gene29146	0.831865	1.31E-55	-1.69E-46
MS.gene057752	MS.gene29146	0.816402	5.63E-52	-1.69E-46
MS.gene057754	MS.gene29146	0.822612	2.16E-53	-1.69E-46
MS.gene057779	MS.gene29146	0.802101	6.58E-49	-1.69E-46
MS.gene057794	MS.gene29146	0.805916	1.06E-49	-1.69E-46
MS.gene058002	MS.gene29146	0.838253	3.21E-57	-1.69E-46
MS.gene05811	MS.gene29146	0.847237	1.31E-59	-1.69E-46
MS.gene058168	MS.gene29146	0.819066	1.41E-52	-1.69E-46
MS.gene058484	MS.gene29146	0.825858	3.73E-54	-1.69E-46
MS.gene058845	MS.gene29146	0.802495	5.46E-49	-1.69E-46
MS.gene059006	MS.gene29146	0.844837	5.90E-59	-1.69E-46
MS.gene05907	MS.gene29146	0.810428	1.16E-50	-1.69E-46
MS.gene059124	MS.gene29146	0.814608	1.41E-51	-1.69E-46
MS.gene059228	MS.gene29146	0.84358	1.28E-58	-1.69E-46
MS.gene059294	MS.gene29146	0.827611	1.42E-54	-1.69E-46
MS.gene059421	MS.gene29146	0.804725	1.88E-49	-1.69E-46
MS.gene059518	MS.gene29146	0.845325	4.36E-59	-1.69E-46
MS.gene05984	MS.gene29146	0.827197	1.79E-54	-1.69E-46
MS.gene059894	MS.gene29146	0.803318	3.69E-49	-1.69E-46
MS.gene059974	MS.gene29146	0.806129	9.56E-50	-1.69E-46
MS.gene060005	MS.gene29146	0.804075	2.57E-49	-1.69E-46
MS.gene06037	MS.gene29146	0.845291	4.45E-59	-1.69E-46
MS.gene060476	MS.gene29146	0.864067	1.59E-64	-1.69E-46
MS.gene060495	MS.gene29146	0.806453	8.17E-50	-1.69E-46
MS.gene060559	MS.gene29146	0.812783	3.56E-51	-1.69E-46
MS.gene061049	MS.gene29146	0.837486	5.05E-57	-1.69E-46
MS.gene061112	MS.gene29146	0.806371	8.50E-50	-1.69E-46
MS.gene061265	MS.gene29146	0.807618	4.63E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29146.t1	MTR_5g032600	96.875	256	3	2	1	251	17	272	0.0	503
MS.gene29146.t1	MTR_3g100650	55.714	210	70	6	54	251	76	274	1.57e-66	207
MS.gene29146.t1	MTR_5g065440	47.232	271	92	9	5	251	25	268	1.41e-64	202
MS.gene29146.t1	MTR_2g076780	44.017	234	120	4	27	250	4	236	8.42e-58	184
MS.gene29146.t1	MTR_8g069080	42.917	240	125	3	18	250	33	267	3.02e-56	181
MS.gene29146.t1	MTR_1g077020	45.274	201	83	5	56	250	7	186	8.20e-55	175
MS.gene29146.t1	MTR_7g010300	45.833	216	73	6	58	250	88	282	4.05e-52	172
MS.gene29146.t1	MTR_5g020510	42.254	213	93	4	55	250	96	295	1.68e-51	170
MS.gene29146.t1	MTR_4g134580	42.917	240	86	6	57	250	112	346	2.34e-51	171
MS.gene29146.t1	MTR_6g012280	49.246	199	90	4	58	250	91	284	8.22e-48	161
MS.gene29146.t1	MTR_6g073013	37.173	191	69	4	58	246	19	160	5.98e-33	118
MS.gene29146.t1	MTR_8g069380	58.427	89	30	3	170	251	27	115	7.37e-25	95.5
MS.gene29146.t1	MTR_8g051480	61.333	75	26	2	178	250	55	128	9.18e-23	90.5
MS.gene29146.t1	MTR_8g442330	33.121	157	72	3	69	225	16	139	2.99e-22	89.4
MS.gene29146.t1	MTR_8g467340	67.188	64	20	1	188	250	271	334	1.72e-21	92.4
MS.gene29146.t1	MTR_8g467340	71.154	52	13	1	58	107	64	115	5.20e-18	82.8
MS.gene29146.t1	MTR_3g039810	60.345	58	23	0	57	114	19	76	5.44e-19	79.3
MS.gene29146.t1	MTR_6g012220	58.824	51	17	1	56	106	19	65	5.00e-14	65.9
MS.gene29146.t1	MTR_7g070643	58.182	55	18	1	42	96	71	120	8.73e-12	62.4
MS.gene29146.t1	MTR_6g080300	45.312	64	30	1	33	96	34	92	6.62e-11	57.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene29146.t1	AT4G24660	54.040	198	69	4	54	251	45	220	2.39e-67	207
MS.gene29146.t1	AT4G24660	53.093	194	69	4	54	247	45	216	2.39e-64	201
MS.gene29146.t1	AT5G65410	50.732	205	87	3	47	251	64	254	7.44e-62	196
MS.gene29146.t1	AT2G02540	45.024	211	87	5	57	250	86	284	9.99e-59	189
MS.gene29146.t1	AT2G02540	45.024	211	87	5	57	250	86	284	9.99e-59	189
MS.gene29146.t1	AT1G14440	44.878	205	89	5	57	250	89	280	1.04e-52	173
MS.gene29146.t1	AT1G14440	44.878	205	89	5	57	250	89	280	1.04e-52	173
MS.gene29146.t1	AT2G18350	46.078	204	82	5	54	250	78	260	1.94e-50	166
MS.gene29146.t1	AT1G69600	45.312	192	96	3	58	247	31	215	2.13e-46	155
MS.gene29146.t1	AT5G15210	47.959	196	81	3	56	244	54	235	2.68e-45	153
MS.gene29146.t1	AT5G60480	39.462	223	109	5	27	245	4	204	9.84e-44	147
MS.gene29146.t1	AT3G50890	42.857	203	89	5	56	249	58	242	2.04e-41	142
MS.gene29146.t1	AT5G39760	41.204	216	95	5	58	250	56	262	1.22e-40	142
MS.gene29146.t1	AT3G28920	40.670	209	102	4	55	247	49	251	1.79e-40	142
MS.gene29146.t1	AT5G42780	36.500	200	98	5	55	247	61	238	6.95e-28	107
MS.gene29146.t1	AT1G75240	75.000	52	13	0	56	107	74	125	9.79e-24	97.4
MS.gene29146.t1	AT1G74660	65.000	60	21	0	56	115	37	96	1.12e-23	92.0
MS.gene29146.t1	AT1G74660	64.407	59	21	0	56	114	37	95	1.09e-22	89.7
MS.gene29146.t1	AT3G28917	56.667	60	25	1	56	114	31	90	5.46e-18	77.0
MS.gene29146.t1	AT1G18835	55.932	59	23	1	56	114	24	79	5.11e-17	74.3

Find 73 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCGGGGTATTTGCATGTTTC+TGG	0.138100	5.3:-21736641	MS.gene29146:CDS
GTTGGAGTTAGCTGAGAAAT+TGG	0.240875	5.3:-21736450	MS.gene29146:CDS
TTAACAACTCTTGATGAGTT+TGG	0.309890	5.3:+21737031	None:intergenic
CTTGCTTTACCGTCAACTTC+TGG	0.335479	5.3:-21736599	MS.gene29146:CDS
AGCGTCATGTTCTTAAGGTT+TGG	0.351100	5.3:-21736364	MS.gene29146:CDS
TCAGAAACATGATGAAGGTT+TGG	0.379981	5.3:-21736417	MS.gene29146:CDS
ATTGGTGGTCATGCTCTTGA+TGG	0.382322	5.3:-21736854	MS.gene29146:CDS
TCAACTTCTGGTGGCGGTGG+AGG	0.395039	5.3:-21736587	MS.gene29146:CDS
TGTTAAGCGTCATGTTCTTA+AGG	0.403141	5.3:-21736369	MS.gene29146:CDS
TTGGAGTTAGCTGAGAAATT+GGG	0.451712	5.3:-21736449	MS.gene29146:CDS
GTTTCTGGACAGCAGAGGAC+TGG	0.452007	5.3:-21736626	MS.gene29146:CDS
AGCAACATGGTTGGTGGTGT+TGG	0.458102	5.3:-21736926	MS.gene29146:CDS
ATGGTTGGTGGTGTTGGAAA+TGG	0.467173	5.3:-21736920	MS.gene29146:CDS
TGCGGTGAGTTTATGCCGGC+AGG	0.468779	5.3:-21736830	MS.gene29146:CDS
CCGTCAACTTCTGGTGGCGG+TGG	0.471225	5.3:-21736590	MS.gene29146:CDS
GGCAGGAAGTGAAGGAACTT+TGG	0.482158	5.3:-21736813	MS.gene29146:CDS
CAACTTCTGGTGGCGGTGGA+GGG	0.486754	5.3:-21736586	MS.gene29146:CDS
CATAACAACAAACACACTCT+TGG	0.491859	5.3:-21736338	MS.gene29146:CDS
AATCCAAGTGGTGGTGGAAG+TGG	0.494106	5.3:-21736527	MS.gene29146:CDS
ACCACCTCCTCCACAGTTCG+CGG	0.495788	5.3:-21736681	MS.gene29146:CDS
GAACCACTTCCACCACCACT+TGG	0.498974	5.3:+21736524	None:intergenic
GCCGCGAACTGTGGAGGAGG+TGG	0.503461	5.3:+21736680	None:intergenic
AGTGGATGAGTGACCATGAT+AGG	0.506193	5.3:+21736989	None:intergenic
GCGAACTGTGGAGGAGGTGG+TGG	0.508708	5.3:+21736683	None:intergenic
AGAATTCAGAAACATGATGA+AGG	0.509328	5.3:-21736422	MS.gene29146:CDS
GCTTATTATCGAACTCCAGC+GGG	0.510651	5.3:-21736659	MS.gene29146:CDS
TCAAGAGTTGTTAAGATGCC+TGG	0.513910	5.3:-21737022	MS.gene29146:CDS
TGATGATGTGTCAACAGAAA+AGG	0.515803	5.3:+21736710	None:intergenic
GTTTCGAATCCAAGTGGTGG+TGG	0.518013	5.3:-21736533	MS.gene29146:CDS
AAGAATCATGCTGTAGGTAT+TGG	0.519190	5.3:-21736872	MS.gene29146:CDS
CCACCGCCACCAGAAGTTGA+CGG	0.524349	5.3:+21736590	None:intergenic
GTTCAAGCAAGAAGAGGCAT+AGG	0.530566	5.3:-21736505	MS.gene29146:CDS
AATCATGCTGTAGGTATTGG+TGG	0.532401	5.3:-21736869	MS.gene29146:CDS
TGGTGGAACTGAACCTATCA+TGG	0.550765	5.3:-21737002	MS.gene29146:CDS
GTGGAGGGACGCAGAGTACG+AGG	0.551910	5.3:-21736571	MS.gene29146:CDS
AAAGTTCCTTCACTTCCTGC+CGG	0.552211	5.3:+21736815	None:intergenic
CGATAATAAGCCGCGAACTG+TGG	0.552754	5.3:+21736671	None:intergenic
TAATAAGCCGCGAACTGTGG+AGG	0.552837	5.3:+21736674	None:intergenic
TTACCGTCAACTTCTGGTGG+CGG	0.554834	5.3:-21736593	MS.gene29146:CDS
AAAATTCACGCAGGAACAGA+AGG	0.559129	5.3:-21736480	MS.gene29146:CDS
TAAGCCGCGAACTGTGGAGG+AGG	0.562343	5.3:+21736677	None:intergenic
GATGATGTGTCAACAGAAAA+GGG	0.562574	5.3:+21736711	None:intergenic
TTTCTGGACAGCAGAGGACT+GGG	0.567641	5.3:-21736625	MS.gene29146:CDS
GGAACAGAAGGATAAGATGT+TGG	0.570619	5.3:-21736468	MS.gene29146:CDS
GAGGAAGAATTATGTATGGG+TGG	0.575821	5.3:-21737073	None:intergenic
GGTCATGCTCTTGATGGTTG+CGG	0.581532	5.3:-21736848	MS.gene29146:CDS
GCTTTACCGTCAACTTCTGG+TGG	0.583371	5.3:-21736596	MS.gene29146:CDS
GAAGAATTATGTATGGGTGG+AGG	0.586004	5.3:-21737070	None:intergenic
AGTTAGCTGAGAAATTGGGT+TGG	0.589225	5.3:-21736445	MS.gene29146:CDS
TTTATGCCGGCAGGAAGTGA+AGG	0.589438	5.3:-21736821	MS.gene29146:CDS
ACTGTGGAGGAGGTGGTGGA+TGG	0.597538	5.3:+21736687	None:intergenic
TCATCGGCAGATGTTACTGC+CGG	0.600307	5.3:-21736737	MS.gene29146:CDS
TGTCAACAGAAAAGGGTCAC+CGG	0.601235	5.3:+21736718	None:intergenic
CTTCCACCGAAAAGAGTCAT+CGG	0.604115	5.3:-21736753	MS.gene29146:CDS
TGGTTGCGGTGAGTTTATGC+CGG	0.613273	5.3:-21736834	MS.gene29146:CDS
AATGGAAACAGCAACATGGT+TGG	0.615914	5.3:-21736935	MS.gene29146:CDS
CAAGAATTCTGTAATGAAAG+CGG	0.619098	5.3:-21736392	MS.gene29146:CDS
GGCTTATTATCGAACTCCAG+CGG	0.620210	5.3:-21736660	MS.gene29146:CDS
TTGTTAAGGATGTTTCTGAG+TGG	0.621550	5.3:+21736971	None:intergenic
GAAACATGCAAATACCCCGC+TGG	0.623881	5.3:+21736644	None:intergenic
TGTCTGAAGAATCATGCTGT+AGG	0.629570	5.3:-21736878	MS.gene29146:CDS
CAACAATGGAAACAGCAACA+TGG	0.631699	5.3:-21736939	MS.gene29146:CDS
TGCATGTTTCTGGACAGCAG+AGG	0.639645	5.3:-21736631	MS.gene29146:CDS
GGAAACAGCAACATGGTTGG+TGG	0.639744	5.3:-21736932	MS.gene29146:CDS
ATGATAGGTTCAGTTCCACC+AGG	0.642551	5.3:+21737004	None:intergenic
GAAGTGGTTCAAGCAAGAAG+AGG	0.644871	5.3:-21736511	MS.gene29146:CDS
TGGAGGGACGCAGAGTACGA+GGG	0.669430	5.3:-21736570	MS.gene29146:CDS
AGAGTTGTTAAGATGCCTGG+TGG	0.674556	5.3:-21737019	MS.gene29146:CDS
GAAGATGTTTCGAATCCAAG+TGG	0.685294	5.3:-21736539	MS.gene29146:CDS
GTGTTGGAAATGGAAAAGCA+AGG	0.695951	5.3:-21736910	MS.gene29146:CDS
GCATAGGACAAAATTCACGC+AGG	0.713722	5.3:-21736489	MS.gene29146:CDS
CTTATTATCGAACTCCAGCG+GGG	0.719650	5.3:-21736658	MS.gene29146:CDS
GATGTTTCGAATCCAAGTGG+TGG	0.738004	5.3:-21736536	MS.gene29146:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AACAACAACAACAACAACAA+TGG	-	chr5.3:21736430-21736449	MS.gene29146:CDS	30.0%
	AGAATTCAGAAACATGATGA+AGG	-	chr5.3:21736961-21736980	MS.gene29146:CDS	30.0%
	CAAGAATTCTGTAATGAAAG+CGG	-	chr5.3:21736991-21737010	MS.gene29146:CDS	30.0%
	TTAACAACTCTTGATGAGTT+TGG	+	chr5.3:21736355-21736374	None:intergenic	30.0%
!	TGTTGTTGTTGTTGTTGTTA+AGG	+	chr5.3:21736429-21736448	None:intergenic	30.0%
	AAGAATCATGCTGTAGGTAT+TGG	-	chr5.3:21736511-21736530	MS.gene29146:CDS	35.0%
	CATAACAACAAACACACTCT+TGG	-	chr5.3:21737045-21737064	MS.gene29146:CDS	35.0%
	GATGATGTGTCAACAGAAAA+GGG	+	chr5.3:21736675-21736694	None:intergenic	35.0%
	TCAGAAACATGATGAAGGTT+TGG	-	chr5.3:21736966-21736985	MS.gene29146:CDS	35.0%
	TGTTAAGCGTCATGTTCTTA+AGG	-	chr5.3:21737014-21737033	MS.gene29146:CDS	35.0%
	TTGGAGTTAGCTGAGAAATT+GGG	-	chr5.3:21736934-21736953	MS.gene29146:CDS	35.0%
!	TGATGATGTGTCAACAGAAA+AGG	+	chr5.3:21736676-21736695	None:intergenic	35.0%
!	TTGTTAAGGATGTTTCTGAG+TGG	+	chr5.3:21736415-21736434	None:intergenic	35.0%
	AAAATTCACGCAGGAACAGA+AGG	-	chr5.3:21736903-21736922	MS.gene29146:CDS	40.0%
	AATGGAAACAGCAACATGGT+TGG	-	chr5.3:21736448-21736467	MS.gene29146:CDS	40.0%
	AGCGTCATGTTCTTAAGGTT+TGG	-	chr5.3:21737019-21737038	MS.gene29146:CDS	40.0%
	AGTTAGCTGAGAAATTGGGT+TGG	-	chr5.3:21736938-21736957	MS.gene29146:CDS	40.0%
	CAACAATGGAAACAGCAACA+TGG	-	chr5.3:21736444-21736463	MS.gene29146:CDS	40.0%
	GAAGATGTTTCGAATCCAAG+TGG	-	chr5.3:21736844-21736863	MS.gene29146:CDS	40.0%
	GGAACAGAAGGATAAGATGT+TGG	-	chr5.3:21736915-21736934	MS.gene29146:CDS	40.0%
	GTGTTGGAAATGGAAAAGCA+AGG	-	chr5.3:21736473-21736492	MS.gene29146:CDS	40.0%
	GTTGGAGTTAGCTGAGAAAT+TGG	-	chr5.3:21736933-21736952	MS.gene29146:CDS	40.0%
	TCAAGAGTTGTTAAGATGCC+TGG	-	chr5.3:21736361-21736380	MS.gene29146:CDS	40.0%
	TGTCTGAAGAATCATGCTGT+AGG	-	chr5.3:21736505-21736524	MS.gene29146:CDS	40.0%
!	ACTCTTTTCGGTGGAAGTTA+CGG	+	chr5.3:21736627-21736646	None:intergenic	40.0%
!!	AATCATGCTGTAGGTATTGG+TGG	-	chr5.3:21736514-21736533	MS.gene29146:CDS	40.0%
	AAAGTTCCTTCACTTCCTGC+CGG	+	chr5.3:21736571-21736590	None:intergenic	45.0%
	AGAGTTGTTAAGATGCCTGG+TGG	-	chr5.3:21736364-21736383	MS.gene29146:CDS	45.0%
	AGTGGATGAGTGACCATGAT+AGG	+	chr5.3:21736397-21736416	None:intergenic	45.0%
	ATGATAGGTTCAGTTCCACC+AGG	+	chr5.3:21736382-21736401	None:intergenic	45.0%
	CTTATTATCGAACTCCAGCG+GGG	-	chr5.3:21736725-21736744	MS.gene29146:CDS	45.0%
	CTTCCACCGAAAAGAGTCAT+CGG	-	chr5.3:21736630-21736649	MS.gene29146:CDS	45.0%
	CTTGCTTTACCGTCAACTTC+TGG	-	chr5.3:21736784-21736803	MS.gene29146:CDS	45.0%
	GAAGTGGTTCAAGCAAGAAG+AGG	-	chr5.3:21736872-21736891	MS.gene29146:CDS	45.0%
	GATGTTTCGAATCCAAGTGG+TGG	-	chr5.3:21736847-21736866	MS.gene29146:CDS	45.0%
	GCATAGGACAAAATTCACGC+AGG	-	chr5.3:21736894-21736913	MS.gene29146:CDS	45.0%
	GCTTATTATCGAACTCCAGC+GGG	-	chr5.3:21736724-21736743	MS.gene29146:CDS	45.0%
	GGCTTATTATCGAACTCCAG+CGG	-	chr5.3:21736723-21736742	MS.gene29146:CDS	45.0%
	TGGTGGAACTGAACCTATCA+TGG	-	chr5.3:21736381-21736400	MS.gene29146:CDS	45.0%
	TGTCAACAGAAAAGGGTCAC+CGG	+	chr5.3:21736668-21736687	None:intergenic	45.0%
!	ATTGGTGGTCATGCTCTTGA+TGG	-	chr5.3:21736529-21736548	MS.gene29146:CDS	45.0%
!	CATCTGCCGATGACTCTTTT+CGG	+	chr5.3:21736639-21736658	None:intergenic	45.0%
!	GTTCAAGCAAGAAGAGGCAT+AGG	-	chr5.3:21736878-21736897	MS.gene29146:CDS	45.0%
!!	ATGGTTGGTGGTGTTGGAAA+TGG	-	chr5.3:21736463-21736482	MS.gene29146:CDS	45.0%
	CGATAATAAGCCGCGAACTG+TGG	+	chr5.3:21736715-21736734	None:intergenic	50.0%
	GAAACATGCAAATACCCCGC+TGG	+	chr5.3:21736742-21736761	None:intergenic	50.0%
	GCTTTACCGTCAACTTCTGG+TGG	-	chr5.3:21736787-21736806	MS.gene29146:CDS	50.0%
	GGAAACAGCAACATGGTTGG+TGG	-	chr5.3:21736451-21736470	MS.gene29146:CDS	50.0%
	GGCAGGAAGTGAAGGAACTT+TGG	-	chr5.3:21736570-21736589	MS.gene29146:CDS	50.0%
	GTTTCGAATCCAAGTGGTGG+TGG	-	chr5.3:21736850-21736869	MS.gene29146:CDS	50.0%
	TAATAAGCCGCGAACTGTGG+AGG	+	chr5.3:21736712-21736731	None:intergenic	50.0%
	TCATCGGCAGATGTTACTGC+CGG	-	chr5.3:21736646-21736665	MS.gene29146:CDS	50.0%
	TGGTTGCGGTGAGTTTATGC+CGG	-	chr5.3:21736549-21736568	MS.gene29146:CDS	50.0%
	TTACCGTCAACTTCTGGTGG+CGG	-	chr5.3:21736790-21736809	MS.gene29146:CDS	50.0%
	TTTATGCCGGCAGGAAGTGA+AGG	-	chr5.3:21736562-21736581	MS.gene29146:CDS	50.0%
	TTTCTGGACAGCAGAGGACT+GGG	-	chr5.3:21736758-21736777	MS.gene29146:CDS	50.0%
!	CTTTTCGGTGGAAGTTACGG+TGG	+	chr5.3:21736624-21736643	None:intergenic	50.0%
!	GCGGGGTATTTGCATGTTTC+TGG	-	chr5.3:21736742-21736761	MS.gene29146:CDS	50.0%
!	GGTCATGCTCTTGATGGTTG+CGG	-	chr5.3:21736535-21736554	MS.gene29146:CDS	50.0%
!!	AATCCAAGTGGTGGTGGAAG+TGG	-	chr5.3:21736856-21736875	MS.gene29146:CDS	50.0%
!!	AGCAACATGGTTGGTGGTGT+TGG	-	chr5.3:21736457-21736476	MS.gene29146:CDS	50.0%
!!	TGCATGTTTCTGGACAGCAG+AGG	-	chr5.3:21736752-21736771	MS.gene29146:CDS	50.0%
	GAACCACTTCCACCACCACT+TGG	+	chr5.3:21736862-21736881	None:intergenic	55.0%
!	CTGCCGATGACTCTTTTCGG+TGG	+	chr5.3:21736636-21736655	None:intergenic	55.0%
!	GTTTCTGGACAGCAGAGGAC+TGG	-	chr5.3:21736757-21736776	MS.gene29146:CDS	55.0%
	ACCACCTCCTCCACAGTTCG+CGG	-	chr5.3:21736702-21736721	MS.gene29146:CDS	60.0%
	CCACCGCCACCAGAAGTTGA+CGG	+	chr5.3:21736796-21736815	None:intergenic	60.0%
	TAAGCCGCGAACTGTGGAGG+AGG	+	chr5.3:21736709-21736728	None:intergenic	60.0%
	TGCGGTGAGTTTATGCCGGC+AGG	-	chr5.3:21736553-21736572	MS.gene29146:CDS	60.0%
	TGGAGGGACGCAGAGTACGA+GGG	-	chr5.3:21736813-21736832	MS.gene29146:CDS	60.0%
!!	ACTGTGGAGGAGGTGGTGGA+TGG	+	chr5.3:21736699-21736718	None:intergenic	60.0%
!!	CAACTTCTGGTGGCGGTGGA+GGG	-	chr5.3:21736797-21736816	MS.gene29146:CDS	60.0%
!!	TCAACTTCTGGTGGCGGTGG+AGG	-	chr5.3:21736796-21736815	MS.gene29146:CDS	60.0%
	GCGAACTGTGGAGGAGGTGG+TGG	+	chr5.3:21736703-21736722	None:intergenic	65.0%
	GTGGAGGGACGCAGAGTACG+AGG	-	chr5.3:21736812-21736831	MS.gene29146:CDS	65.0%
!!	CCGTCAACTTCTGGTGGCGG+TGG	-	chr5.3:21736793-21736812	MS.gene29146:CDS	65.0%
	GCCGCGAACTGTGGAGGAGG+TGG	+	chr5.3:21736706-21736725	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.3	gene	21736325	21737080	21736325	ID=MS.gene29146
chr5.3	mRNA	21736325	21737080	21736325	ID=MS.gene29146.t1;Parent=MS.gene29146
chr5.3	exon	21736325	21737080	21736325	ID=MS.gene29146.t1.exon1;Parent=MS.gene29146.t1
chr5.3	CDS	21736325	21737080	21736325	ID=cds.MS.gene29146.t1;Parent=MS.gene29146.t1

Gene Sequence

>MS.gene29146

ATGGGTGGAGGAAATTACGACTCTTTACCAAACTCATCAAGAGTTGTTAAGATGCCTGGTGGAACTGAACCTATCATGGTCACTCATCCACTCAGAAACATCCTTAACAACAACAACAACAACAATGGAAACAGCAACATGGTTGGTGGTGTTGGAAATGGAAAAGCAAGGTATAGAGAGTGTCTGAAGAATCATGCTGTAGGTATTGGTGGTCATGCTCTTGATGGTTGCGGTGAGTTTATGCCGGCAGGAAGTGAAGGAACTTTGGAGTCACTAAAATGTGCTGCTTGTAACTGCCACCGTAACTTCCACCGAAAAGAGTCATCGGCAGATGTTACTGCCGGTGACCCTTTTCTGTTGACACATCATCACCATCCACCACCTCCTCCACAGTTCGCGGCTTATTATCGAACTCCAGCGGGGTATTTGCATGTTTCTGGACAGCAGAGGACTGGGACACTTGCTTTACCGTCAACTTCTGGTGGCGGTGGAGGGACGCAGAGTACGAGGGAAGAGCTTGAAGATGTTTCGAATCCAAGTGGTGGTGGAAGTGGTTCAAGCAAGAAGAGGCATAGGACAAAATTCACGCAGGAACAGAAGGATAAGATGTTGGAGTTAGCTGAGAAATTGGGTTGGAGAATTCAGAAACATGATGAAGGTTTGGTTCAAGAATTCTGTAATGAAAGCGGTGTTAAGCGTCATGTTCTTAAGGTTTGGATGCATAACAACAAACACACTCTTGGTAAGAAGCCCTAG

Protein sequence

>MS.gene29146.t1

MGGGNYDSLPNSSRVVKMPGGTEPIMVTHPLRNILNNNNNNNGNSNMVGGVGNGKARYRECLKNHAVGIGGHALDGCGEFMPAGSEGTLESLKCAACNCHRNFHRKESSADVTAGDPFLLTHHHHPPPPPQFAAYYRTPAGYLHVSGQQRTGTLALPSTSGGGGGTQSTREELEDVSNPSGGGSGSSKKRHRTKFTQEQKDKMLELAEKLGWRIQKHDEGLVQEFCNESGVKRHVLKVWMHNNKHTLGKKP