Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057235.t1 | XP_024635815.1 | 99.5 | 196 | 1 | 0 | 1 | 196 | 1 | 196 | 4.00E-93 | 351.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057235.t1 | A2RVS6 | 89.3 | 196 | 20 | 1 | 1 | 196 | 1 | 195 | 2.7e-85 | 316.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057235.t1 | G7J8Y2 | 99.5 | 196 | 1 | 0 | 1 | 196 | 108 | 303 | 2.9e-93 | 351.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057092 | MS.gene057235 | 0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene057235 | MS.gene058245 | 0.809215 | 2.11E-50 | -1.69E-46 |
| MS.gene057235 | MS.gene060856 | 0.803991 | 2.68E-49 | -1.69E-46 |
| MS.gene057235 | MS.gene06835 | 0.902788 | 6.78E-79 | -1.69E-46 |
| MS.gene057235 | MS.gene073358 | 0.846842 | 1.68E-59 | -1.69E-46 |
| MS.gene057235 | MS.gene21636 | 0.829733 | 4.36E-55 | -1.69E-46 |
| MS.gene057235 | MS.gene23437 | 0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene057235 | MS.gene28120 | 0.804283 | 2.33E-49 | -1.69E-46 |
| MS.gene057235 | MS.gene33829 | 0.81244 | 4.23E-51 | -1.69E-46 |
| MS.gene057235 | MS.gene34283 | 0.810432 | 1.16E-50 | -1.69E-46 |
| MS.gene057235 | MS.gene34284 | 0.826148 | 3.18E-54 | -1.69E-46 |
| MS.gene057235 | MS.gene34285 | 0.832525 | 9.00E-56 | -1.69E-46 |
| MS.gene057235 | MS.gene36490 | 0.891332 | 4.38E-74 | -1.69E-46 |
| MS.gene057235 | MS.gene38222 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene057235 | MS.gene40831 | 0.825141 | 5.51E-54 | -1.69E-46 |
| MS.gene057235 | MS.gene40834 | 0.802293 | 6.01E-49 | -1.69E-46 |
| MS.gene057235 | MS.gene46387 | 0.826709 | 2.34E-54 | -1.69E-46 |
| MS.gene057235 | MS.gene48048 | 0.889226 | 2.93E-73 | -1.69E-46 |
| MS.gene057235 | MS.gene50640 | 0.806647 | 7.43E-50 | -1.69E-46 |
| MS.gene057235 | MS.gene55980 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene057235 | MS.gene57391 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene057235 | MS.gene57424 | 0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene057235 | MS.gene58148 | 0.826303 | 2.92E-54 | -1.69E-46 |
| MS.gene057235 | MS.gene61251 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene057235 | MS.gene62652 | 0.817638 | 2.97E-52 | -1.69E-46 |
| MS.gene057235 | MS.gene70215 | 0.824367 | 8.39E-54 | -1.69E-46 |
| MS.gene057235 | MS.gene70292 | 0.837584 | 4.77E-57 | -1.69E-46 |
| MS.gene057235 | MS.gene72382 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene057235 | MS.gene87309 | 0.814464 | 1.52E-51 | -1.69E-46 |
| MS.gene057235 | MS.gene88892 | 0.813396 | 2.61E-51 | -1.69E-46 |
| MS.gene057235 | MS.gene89977 | 0.813427 | 2.57E-51 | -1.69E-46 |
| MS.gene057235 | MS.gene90754 | 0.823414 | 1.40E-53 | -1.69E-46 |
| MS.gene057235 | MS.gene98113 | 0.822352 | 2.48E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057235.t1 | MTR_3g092580 | 97.455 | 275 | 1 | 2 | 1 | 271 | 108 | 380 | 0.0 | 518 |
| MS.gene057235.t1 | MTR_1g083400 | 59.410 | 271 | 97 | 2 | 1 | 270 | 32 | 290 | 8.91e-88 | 263 |
| MS.gene057235.t1 | MTR_8g058530 | 67.136 | 213 | 55 | 3 | 1 | 213 | 1 | 198 | 2.09e-87 | 262 |
| MS.gene057235.t1 | MTR_7g112760 | 61.538 | 234 | 73 | 2 | 1 | 234 | 1 | 217 | 1.52e-86 | 258 |
| MS.gene057235.t1 | MTR_7g112760 | 61.538 | 234 | 73 | 2 | 1 | 234 | 1 | 217 | 3.73e-86 | 259 |
| MS.gene057235.t1 | MTR_7g108810 | 67.136 | 213 | 55 | 3 | 1 | 213 | 102 | 299 | 1.52e-85 | 261 |
| MS.gene057235.t1 | MTR_1g088180 | 60.648 | 216 | 72 | 2 | 1 | 215 | 1 | 204 | 3.50e-80 | 249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 1.75e-114 | 331 |
| MS.gene057235.t1 | AT3G49430 | 86.000 | 200 | 27 | 1 | 1 | 200 | 1 | 199 | 2.01e-114 | 331 |
| MS.gene057235.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 9.20e-87 | 261 |
| MS.gene057235.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene057235.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene057235.t1 | AT1G02840 | 69.668 | 211 | 57 | 3 | 1 | 211 | 1 | 204 | 2.78e-86 | 258 |
| MS.gene057235.t1 | AT1G02840 | 69.194 | 211 | 58 | 2 | 1 | 211 | 1 | 204 | 4.93e-86 | 258 |
| MS.gene057235.t1 | AT1G09140 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 5.05e-85 | 255 |
| MS.gene057235.t1 | AT1G09140 | 63.507 | 211 | 60 | 2 | 1 | 211 | 1 | 194 | 5.46e-85 | 254 |
| MS.gene057235.t1 | AT1G09140 | 57.143 | 245 | 82 | 2 | 1 | 245 | 1 | 222 | 4.29e-81 | 244 |
| MS.gene057235.t1 | AT4G02430 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 7.58e-78 | 237 |
| MS.gene057235.t1 | AT4G02430 | 65.500 | 200 | 63 | 2 | 1 | 200 | 1 | 194 | 1.57e-77 | 237 |
| MS.gene057235.t1 | AT4G02430 | 67.039 | 179 | 56 | 1 | 1 | 179 | 1 | 176 | 6.85e-71 | 216 |
| MS.gene057235.t1 | AT4G02430 | 62.286 | 175 | 60 | 2 | 26 | 200 | 24 | 192 | 5.71e-61 | 194 |
| MS.gene057235.t1 | AT3G61860 | 26.291 | 213 | 125 | 5 | 7 | 217 | 2 | 184 | 1.71e-12 | 66.2 |
| MS.gene057235.t1 | AT2G46610 | 29.444 | 180 | 94 | 6 | 7 | 184 | 2 | 150 | 1.53e-11 | 63.2 |
| MS.gene057235.t1 | AT2G37340 | 41.304 | 92 | 48 | 2 | 9 | 99 | 13 | 99 | 5.61e-11 | 62.0 |
Find 90 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGATGGTTGTCGATTA+AGG | 0.211961 | 3.2:-77896357 | MS.gene057235:CDS |
| TTCATTCTGCAGTAGATCTT+TGG | 0.248661 | 3.2:-77894310 | MS.gene057235:intron |
| TTTCGGACTTCTGCTCCTGC+TGG | 0.293656 | 3.2:+77894427 | None:intergenic |
| CGGCGGTGACGGTGCTGGTG+GGG | 0.314004 | 3.2:-77896174 | MS.gene057235:CDS |
| GGTGGTGGTGGCGGCGGTGG+TGG | 0.314944 | 3.2:-77896206 | MS.gene057235:CDS |
| CTTGATTGGTGATGCTGATC+TGG | 0.325826 | 3.2:+77894245 | None:intergenic |
| TATGGTGGTGGTGGCGGCGG+TGG | 0.349227 | 3.2:-77896209 | MS.gene057235:CDS |
| GGCGGTGGTGGCAGAGGCGG+CGG | 0.350418 | 3.2:-77896194 | MS.gene057235:CDS |
| CTTTGATGGTTGTCGATTAA+GGG | 0.353926 | 3.2:-77896356 | MS.gene057235:intron |
| CTTGGGCGAGATCATATATT+CGG | 0.363557 | 3.2:-77894803 | MS.gene057235:CDS |
| GGTGGCGGCGGTGGTGGCAG+AGG | 0.366433 | 3.2:-77896200 | MS.gene057235:CDS |
| GCCGCAGCAGAAGCCCCAGC+AGG | 0.370082 | 3.2:-77894442 | MS.gene057235:CDS |
| GGCGGTGACGGTGCTGGTGG+GGG | 0.372949 | 3.2:-77896173 | MS.gene057235:CDS |
| AGATGCTGAAGATGCAATTC+GGG | 0.378655 | 3.2:-77896395 | MS.gene057235:CDS |
| TTCGGACTTCTGCTCCTGCT+GGG | 0.379407 | 3.2:+77894428 | None:intergenic |
| GAGATGCTGAAGATGCAATT+CGG | 0.381400 | 3.2:-77896396 | MS.gene057235:CDS |
| TCAAGTGACAGACGTGGATA+TGG | 0.384098 | 3.2:-77896227 | MS.gene057235:CDS |
| ATATACCTGGCAGGCTTGAT+TGG | 0.384601 | 3.2:+77894231 | None:intergenic |
| GGCGGCGGTGACGGTGCTGG+TGG | 0.397097 | 3.2:-77896176 | MS.gene057235:CDS |
| GGCAGAGGCGGCGGCGGTGA+CGG | 0.399302 | 3.2:-77896185 | MS.gene057235:CDS |
| TGCATCCTGGCAGGATTTGA+AGG | 0.403388 | 3.2:-77895655 | MS.gene057235:intron |
| GGCGGCGGTGGTGGCAGAGG+CGG | 0.408001 | 3.2:-77896197 | MS.gene057235:CDS |
| GCGGCGGTGACGGTGCTGGT+GGG | 0.412764 | 3.2:-77896175 | MS.gene057235:CDS |
| TGGTGATGCTGATCTGGATC+TGG | 0.412986 | 3.2:+77894251 | None:intergenic |
| ATGATGGCCCTCTGCCTCCA+TGG | 0.413987 | 3.2:+77896249 | None:intergenic |
| TTAACAGTATGGCCGCATAA+TGG | 0.418415 | 3.2:-77896573 | MS.gene057235:intron |
| TTTACTACAGTTATTGTTCG+TGG | 0.425107 | 3.2:-77895690 | MS.gene057235:intron |
| GAGCTTGCCCATGGAGGCAG+AGG | 0.428432 | 3.2:-77896257 | MS.gene057235:CDS |
| GCTGAACGTGATGGTGATCT+TGG | 0.439286 | 3.2:+77894126 | None:intergenic |
| CATAATGGAAATTGAATTGA+AGG | 0.441407 | 3.2:-77896558 | MS.gene057235:CDS |
| GGCGGCGGCGGTGACGGTGC+TGG | 0.443757 | 3.2:-77896179 | MS.gene057235:CDS |
| CGTGATGGTTACAACTTTGA+TGG | 0.445163 | 3.2:-77896370 | MS.gene057235:CDS |
| CCCATCTTCTGCATCCTGGC+AGG | 0.446763 | 3.2:-77895664 | MS.gene057235:CDS |
| TGCTGATCTGGATCTGGATC+TGG | 0.447648 | 3.2:+77894257 | None:intergenic |
| GCAGGAGCAGAAGTCCGAAA+AGG | 0.447779 | 3.2:-77894424 | MS.gene057235:CDS |
| CGTGGATATGGTGGTGGTGG+CGG | 0.452692 | 3.2:-77896215 | MS.gene057235:CDS |
| GGTGGTGGCAGAGGCGGCGG+CGG | 0.454844 | 3.2:-77896191 | MS.gene057235:CDS |
| TCCTGCCAGGATGCAGAAGA+TGG | 0.465406 | 3.2:+77895663 | None:intergenic |
| CACCGAGTTTAGAAATCCTT+GGG | 0.466660 | 3.2:-77894820 | MS.gene057235:CDS |
| CAGGAGCAGAAGTCCGAAAA+GGG | 0.468055 | 3.2:-77894423 | MS.gene057235:CDS |
| GGATATGGTGGTGGTGGCGG+CGG | 0.469005 | 3.2:-77896212 | MS.gene057235:CDS |
| TCTCGCCATTCTGAATTTCG+AGG | 0.470913 | 3.2:-77896137 | MS.gene057235:intron |
| GACTCCCATCTTCTGCATCC+TGG | 0.479983 | 3.2:-77895668 | MS.gene057235:CDS |
| ACACCGAGTTTAGAAATCCT+TGG | 0.480051 | 3.2:-77894821 | MS.gene057235:CDS |
| TGATGGCCCTCTGCCTCCAT+GGG | 0.481565 | 3.2:+77896250 | None:intergenic |
| CATCACCAATCAAGCCTGCC+AGG | 0.494990 | 3.2:-77894236 | MS.gene057235:intron |
| TGATACCTTCAAATCCTGCC+AGG | 0.500259 | 3.2:+77895650 | None:intergenic |
| AGTATGAGAGCAGTCGTTCA+AGG | 0.508477 | 3.2:-77894466 | MS.gene057235:CDS |
| TCCTGCTGGGGCTTCTGCTG+CGG | 0.520416 | 3.2:+77894441 | None:intergenic |
| AATTGAAGATCTGTTCTACA+AGG | 0.526628 | 3.2:-77897158 | MS.gene057235:intron |
| TTGCAGGTTCTGTCTGGTAG+CGG | 0.530230 | 3.2:-77893696 | MS.gene057235:intron |
| CAGGATCATATGCGAAAAGC+TGG | 0.535111 | 3.2:-77895548 | MS.gene057235:CDS |
| CTTTGGAGCGATCTGTGTCT+AGG | 0.537173 | 3.2:-77894293 | MS.gene057235:CDS |
| CCACGTCTGTCACTTGATGA+TGG | 0.538561 | 3.2:+77896233 | None:intergenic |
| TCTGATTCTCTTATATCAGC+GGG | 0.538836 | 3.2:+77897181 | None:intergenic |
| TCGGACTTCTGCTCCTGCTG+GGG | 0.539897 | 3.2:+77894429 | None:intergenic |
| TTGTAGGTGGAGCTTGCCCA+TGG | 0.543564 | 3.2:-77896266 | MS.gene057235:intron |
| CGCCCAAGGATTTCTAAACT+CGG | 0.544119 | 3.2:+77894818 | None:intergenic |
| ATGTGTACCTTCACTGTCAC+GGG | 0.544426 | 3.2:+77895502 | None:intergenic |
| AATAACTTTATATACCTGGC+AGG | 0.549603 | 3.2:+77894222 | None:intergenic |
| TCAATTCAATTTCCATTATG+CGG | 0.550277 | 3.2:+77896561 | None:intergenic |
| AGACGTGGATATGGTGGTGG+TGG | 0.550293 | 3.2:-77896218 | MS.gene057235:CDS |
| TTGGGCGAGATCATATATTC+GGG | 0.556218 | 3.2:-77894802 | MS.gene057235:intron |
| TTCTGATTCTCTTATATCAG+CGG | 0.559626 | 3.2:+77897180 | None:intergenic |
| CCTGCCAGGATGCAGAAGAT+GGG | 0.560764 | 3.2:+77895664 | None:intergenic |
| GATGCAATTCGGGGTCGTGA+TGG | 0.566481 | 3.2:-77896385 | MS.gene057235:CDS |
| GTCTCCACGATCACCACGCC+AGG | 0.568223 | 3.2:-77894103 | MS.gene057235:intron |
| ATTCTCTTATATCAGCGGGC+AGG | 0.571374 | 3.2:+77897185 | None:intergenic |
| GAAGTCCGAAAAGGGCCAGA+AGG | 0.575911 | 3.2:-77894415 | MS.gene057235:intron |
| AAACAATAACATGGAGGGCG+AGG | 0.577762 | 3.2:+77896530 | None:intergenic |
| AATACCTGGCGTGGTGATCG+TGG | 0.578656 | 3.2:+77894099 | None:intergenic |
| AATGTGTACCTTCACTGTCA+CGG | 0.584101 | 3.2:+77895501 | None:intergenic |
| AGCGATCTGTGTCTAGGTCA+CGG | 0.589459 | 3.2:-77894287 | MS.gene057235:CDS |
| CATAATTAGTGTAATCAACA+AGG | 0.593738 | 3.2:+77894973 | None:intergenic |
| CGAATATATGATCTCGCCCA+AGG | 0.595825 | 3.2:+77894804 | None:intergenic |
| ACCTCAACAAAACAATAACA+TGG | 0.614465 | 3.2:+77896521 | None:intergenic |
| GAAGTTTCCCGTGACAGTGA+AGG | 0.619160 | 3.2:-77895509 | MS.gene057235:intron |
| TCAGCTTTAAATACCTGGCG+TGG | 0.620343 | 3.2:+77894090 | None:intergenic |
| CAACAAAACAATAACATGGA+GGG | 0.622678 | 3.2:+77896525 | None:intergenic |
| AATGGCGAGAGACACCAAAA+CGG | 0.624683 | 3.2:+77896150 | None:intergenic |
| CAATAACATGGAGGGCGAGG+AGG | 0.631600 | 3.2:+77896533 | None:intergenic |
| GACAGACGTGGATATGGTGG+TGG | 0.636926 | 3.2:-77896221 | MS.gene057235:CDS |
| AGCTTGCCCATGGAGGCAGA+GGG | 0.639574 | 3.2:-77896256 | MS.gene057235:CDS |
| ACACACCTCGAAATTCAGAA+TGG | 0.647364 | 3.2:+77896132 | None:intergenic |
| TAGGTGGAGCTTGCCCATGG+AGG | 0.659359 | 3.2:-77896263 | MS.gene057235:CDS |
| CCATCATCAAGTGACAGACG+TGG | 0.667075 | 3.2:-77896233 | MS.gene057235:CDS |
| CGTGGAGACGCTGAACGTGA+TGG | 0.668695 | 3.2:+77894117 | None:intergenic |
| TCAACAAAACAATAACATGG+AGG | 0.687199 | 3.2:+77896524 | None:intergenic |
| AGTGACAGACGTGGATATGG+TGG | 0.702073 | 3.2:-77896224 | MS.gene057235:CDS |
| GATGCTGAAGATGCAATTCG+GGG | 0.704956 | 3.2:-77896394 | MS.gene057235:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTAATATTTTTA+TGG | - | chr3.2:77895583-77895602 | MS.gene057235:intron | 0.0% |
| !! | GTTAAATCAATATATATTAA+AGG | - | chr3.2:77896927-77896946 | MS.gene057235:intron | 10.0% |
| !!! | GTGATAATATTTTTTTTTAA+TGG | - | chr3.2:77896216-77896235 | MS.gene057235:CDS | 10.0% |
| !!! | TTTAATTTTTGTTTAATTAC+TGG | - | chr3.2:77893960-77893979 | MS.gene057235:intron | 10.0% |
| !!! | TTTTTCATAATAATAAAGAA+TGG | - | chr3.2:77896876-77896895 | MS.gene057235:intron | 10.0% |
| !! | AAAATATGTTAGAAAACATA+TGG | + | chr3.2:77896047-77896066 | None:intergenic | 15.0% |
| !! | ATTAATTTAATACAAAACAG+AGG | + | chr3.2:77895568-77895587 | None:intergenic | 15.0% |
| !!! | ATTAAAATTTTCTGTCAAAA+AGG | - | chr3.2:77894953-77894972 | MS.gene057235:intron | 15.0% |
| !!! | ATTTCCTTATTTTTTTTTAC+CGG | - | chr3.2:77897090-77897109 | MS.gene057235:intron | 15.0% |
| !!! | TGCATTTTTATTTTTCATTT+AGG | - | chr3.2:77894876-77894895 | MS.gene057235:intron | 15.0% |
| !! | AAAAAAAGACTAAGATACTA+TGG | + | chr3.2:77895202-77895221 | None:intergenic | 20.0% |
| !! | AAACCAAATATTAAAACTGT+AGG | + | chr3.2:77895347-77895366 | None:intergenic | 20.0% |
| !! | AAACGAATATCGTATAAATT+TGG | + | chr3.2:77896013-77896032 | None:intergenic | 20.0% |
| !! | AACAAATATGCAAAAGAAAT+AGG | + | chr3.2:77897155-77897174 | None:intergenic | 20.0% |
| !! | AACGAATATCGTATAAATTT+GGG | + | chr3.2:77896012-77896031 | None:intergenic | 20.0% |
| !! | ATAAGTATGTCTAAACTAAA+AGG | + | chr3.2:77896567-77896586 | None:intergenic | 20.0% |
| !! | ATGATAAACATGATATTAGT+CGG | + | chr3.2:77894920-77894939 | None:intergenic | 20.0% |
| !! | CAACAACATAAATATAGAAA+AGG | + | chr3.2:77895481-77895500 | None:intergenic | 20.0% |
| !! | GTATATAAAGTTATTAGACA+TGG | - | chr3.2:77896701-77896720 | MS.gene057235:intron | 20.0% |
| !! | TATAAATGTTATTACAGATC+TGG | + | chr3.2:77896142-77896161 | None:intergenic | 20.0% |
| !! | TCTATATTTATGTTGTTGTA+TGG | - | chr3.2:77895483-77895502 | MS.gene057235:intron | 20.0% |
| !! | TTGTAACCAAATAAAAAACA+TGG | - | chr3.2:77894850-77894869 | MS.gene057235:intron | 20.0% |
| !!! | AATTAAAAGTATTATCTTGC+AGG | - | chr3.2:77896420-77896439 | MS.gene057235:intron | 20.0% |
| !!! | ATTAATATTTTTATGGCTTG+AGG | - | chr3.2:77895590-77895609 | MS.gene057235:intron | 20.0% |
| !!! | TAGTAATTTACACAAGTTTT+AGG | - | chr3.2:77897120-77897139 | MS.gene057235:intron | 20.0% |
| !!! | TATTTTCTTTTTCACAGATT+CGG | - | chr3.2:77896061-77896080 | MS.gene057235:intron | 20.0% |
| ! | ACAATTCAAGTGCATAAAAA+TGG | + | chr3.2:77896754-77896773 | None:intergenic | 25.0% |
| ! | CATAATTAGTGTAATCAACA+AGG | + | chr3.2:77895945-77895964 | None:intergenic | 25.0% |
| ! | CTTCAATAATTATTGCTGAT+TGG | + | chr3.2:77895141-77895160 | None:intergenic | 25.0% |
| ! | GCACAAAAATATAATGCAAA+AGG | + | chr3.2:77895862-77895881 | None:intergenic | 25.0% |
| ! | GTCTAATAACTTTATATACC+TGG | + | chr3.2:77896700-77896719 | None:intergenic | 25.0% |
| ! | TAATCTAGTAGTGAGAAAAA+GGG | + | chr3.2:77894466-77894485 | None:intergenic | 25.0% |
| ! | TATCTTATATGTAGCTTCAA+GGG | - | chr3.2:77894254-77894273 | MS.gene057235:CDS | 25.0% |
| ! | TATTCATTTATTGTCTGAGA+GGG | - | chr3.2:77896167-77896186 | MS.gene057235:CDS | 25.0% |
| ! | TCAATTCAATTTCCATTATG+CGG | + | chr3.2:77894357-77894376 | None:intergenic | 25.0% |
| ! | TGAATTGTTTATCCAATTAC+AGG | - | chr3.2:77896766-77896785 | MS.gene057235:intron | 25.0% |
| ! | TGATAACAGTTAATGAGAAA+AGG | - | chr3.2:77894043-77894062 | MS.gene057235:intron | 25.0% |
| ! | TGTTCCGGTAAAAAAAAATA+AGG | + | chr3.2:77897097-77897116 | None:intergenic | 25.0% |
| ! | TTATCTTATATGTAGCTTCA+AGG | - | chr3.2:77894253-77894272 | MS.gene057235:CDS | 25.0% |
| ! | TTATTCATTTATTGTCTGAG+AGG | - | chr3.2:77896166-77896185 | MS.gene057235:CDS | 25.0% |
| !! | CATAATGGAAATTGAATTGA+AGG | - | chr3.2:77894357-77894376 | MS.gene057235:intron | 25.0% |
| !! | CTACTAGATTACTTGTATTT+TGG | - | chr3.2:77894475-77894494 | MS.gene057235:CDS | 25.0% |
| !! | GGTATTTAAAGCTGATTATA+TGG | - | chr3.2:77896833-77896852 | MS.gene057235:intron | 25.0% |
| !!! | AAAGCTCTCATTTTAGTTTA+GGG | - | chr3.2:77895765-77895784 | MS.gene057235:intron | 25.0% |
| !!! | CAGTTTTAATATTTGGTTTC+AGG | - | chr3.2:77895348-77895367 | MS.gene057235:intron | 25.0% |
| !!! | GCAATTCCATGTTTTTTATT+TGG | + | chr3.2:77894859-77894878 | None:intergenic | 25.0% |
| !!! | TATAATCAGCTTTAAATACC+TGG | + | chr3.2:77896833-77896852 | None:intergenic | 25.0% |
| !!! | TATGGTTCAGAATTTTAATG+AGG | - | chr3.2:77896851-77896870 | MS.gene057235:intron | 25.0% |
| !!! | TCACCTACAGTTTTAATATT+TGG | - | chr3.2:77895341-77895360 | MS.gene057235:intron | 25.0% |
| !!! | TGTGTTTTGTTCAATTTGTT+TGG | - | chr3.2:77893838-77893857 | MS.gene057235:intron | 25.0% |
| !!! | TTTTCTTGTTTTCCATGTTA+TGG | - | chr3.2:77893794-77893813 | MS.gene057235:intron | 25.0% |
| AAAAGAATCCATGCTTCATT+AGG | + | chr3.2:77897199-77897218 | None:intergenic | 30.0% | |
| AAACAAAGACACGACAAATA+AGG | + | chr3.2:77896303-77896322 | None:intergenic | 30.0% | |
| AAACATGAAGATAAGAGTCA+TGG | + | chr3.2:77895012-77895031 | None:intergenic | 30.0% | |
| AAATAGAGAAGTAGAAATGC+AGG | + | chr3.2:77893943-77893962 | None:intergenic | 30.0% | |
| AACAAAGACACGACAAATAA+GGG | + | chr3.2:77896302-77896321 | None:intergenic | 30.0% | |
| AATAACTTTATATACCTGGC+AGG | + | chr3.2:77896696-77896715 | None:intergenic | 30.0% | |
| AATTGAAGATCTGTTCTACA+AGG | - | chr3.2:77893757-77893776 | MS.gene057235:intron | 30.0% | |
| AATTGTGATTTCCATTTGAG+GGG | + | chr3.2:77895618-77895637 | None:intergenic | 30.0% | |
| ACCTCAACAAAACAATAACA+TGG | + | chr3.2:77894397-77894416 | None:intergenic | 30.0% | |
| AGGTCAACAGAAAAAATACA+TGG | + | chr3.2:77894147-77894166 | None:intergenic | 30.0% | |
| ATTCAAGTGCATAAAAATGG+TGG | + | chr3.2:77896751-77896770 | None:intergenic | 30.0% | |
| ATTTCACTGTTTGTATGAGA+AGG | - | chr3.2:77896376-77896395 | MS.gene057235:CDS | 30.0% | |
| CAACAAAACAATAACATGGA+GGG | + | chr3.2:77894393-77894412 | None:intergenic | 30.0% | |
| CAATTGTGATTTCCATTTGA+GGG | + | chr3.2:77895619-77895638 | None:intergenic | 30.0% | |
| CATGGAAAACAAGAAAAGTA+CGG | + | chr3.2:77893791-77893810 | None:intergenic | 30.0% | |
| CTGAAACAATTGAGAAGAAA+AGG | + | chr3.2:77895742-77895761 | None:intergenic | 30.0% | |
| GTAATCTAGTAGTGAGAAAA+AGG | + | chr3.2:77894467-77894486 | None:intergenic | 30.0% | |
| GTTCCTACTTTCTGTAATAT+TGG | + | chr3.2:77897004-77897023 | None:intergenic | 30.0% | |
| TACAAAGCAGTTATTAAGTG+AGG | - | chr3.2:77897044-77897063 | MS.gene057235:intron | 30.0% | |
| TACTATATCTTCCTATTGTC+TGG | - | chr3.2:77893862-77893881 | MS.gene057235:intron | 30.0% | |
| TCAACAAAACAATAACATGG+AGG | + | chr3.2:77894394-77894413 | None:intergenic | 30.0% | |
| TCAATTGTGATTTCCATTTG+AGG | + | chr3.2:77895620-77895639 | None:intergenic | 30.0% | |
| TCACCTCAGAAAATAAAAGT+TGG | + | chr3.2:77894597-77894616 | None:intergenic | 30.0% | |
| TGTAAATTACTACTCTGTTC+CGG | + | chr3.2:77897112-77897131 | None:intergenic | 30.0% | |
| TTCTGATTCTCTTATATCAG+CGG | + | chr3.2:77893738-77893757 | None:intergenic | 30.0% | |
| TTTACTACAGTTATTGTTCG+TGG | - | chr3.2:77895225-77895244 | MS.gene057235:intron | 30.0% | |
| TTTGTATGAGAAGGATTATC+TGG | - | chr3.2:77896385-77896404 | MS.gene057235:CDS | 30.0% | |
| ! | ATGGCTAACTTTCTATTTTC+TGG | - | chr3.2:77895828-77895847 | MS.gene057235:intron | 30.0% |
| ! | CAGTTAATGAGAAAAGGTTT+TGG | - | chr3.2:77894049-77894068 | MS.gene057235:intron | 30.0% |
| ! | GTATTGTGACTTTCTGATTT+TGG | - | chr3.2:77896522-77896541 | MS.gene057235:intron | 30.0% |
| ! | TTATACGATATTCGTTTTGC+TGG | - | chr3.2:77896016-77896035 | MS.gene057235:intron | 30.0% |
| !! | TAGCTTTGTTATCTTGGATT+TGG | - | chr3.2:77894197-77894216 | MS.gene057235:intron | 30.0% |
| !! | TCCATGTTATTGTTTTGTTG+AGG | - | chr3.2:77894393-77894412 | MS.gene057235:intron | 30.0% |
| !! | TTTGCTTAGCTTTGTTATCT+TGG | - | chr3.2:77894191-77894210 | MS.gene057235:intron | 30.0% |
| !!! | AGATTACTTGTATTTTGGCT+TGG | - | chr3.2:77894480-77894499 | MS.gene057235:intron | 30.0% |
| !!! | CAAAGCTCTCATTTTAGTTT+AGG | - | chr3.2:77895764-77895783 | MS.gene057235:intron | 30.0% |
| !!! | CTTTCTATTTTCTGGAGTAT+TGG | - | chr3.2:77895836-77895855 | MS.gene057235:intron | 30.0% |
| !!! | GTTCCAACTTTTATTTTCTG+AGG | - | chr3.2:77894591-77894610 | MS.gene057235:intron | 30.0% |
| !!! | GTTTACTGGCTTTTACTAAT+CGG | + | chr3.2:77894008-77894027 | None:intergenic | 30.0% |
| AAGATAAGAGTCATGGACAA+TGG | + | chr3.2:77895005-77895024 | None:intergenic | 35.0% | |
| AAGTGAAAACATGATTGCGA+AGG | + | chr3.2:77896976-77896995 | None:intergenic | 35.0% | |
| ACAGAAAAAATACATGGCTG+TGG | + | chr3.2:77894141-77894160 | None:intergenic | 35.0% | |
| AGAAGAAAAGGTCTACATGT+CGG | + | chr3.2:77895730-77895749 | None:intergenic | 35.0% | |
| AGTTATTTACGCCACTCATA+TGG | + | chr3.2:77895531-77895550 | None:intergenic | 35.0% | |
| ATGAGTGGCGTAAATAACTT+GGG | - | chr3.2:77895532-77895551 | MS.gene057235:CDS | 35.0% | |
| ATGTCTACTAACATGGTCAT+TGG | + | chr3.2:77895696-77895715 | None:intergenic | 35.0% | |
| ATGTTTGTCCTAATGAAGCA+TGG | - | chr3.2:77897188-77897207 | MS.gene057235:CDS | 35.0% | |
| ATTAAGTGAGGATGAACATC+TGG | - | chr3.2:77897056-77897075 | MS.gene057235:intron | 35.0% | |
| ATTCAGTTCAAAACTCCCAA+TGG | + | chr3.2:77893902-77893921 | None:intergenic | 35.0% | |
| CAGAAAAAATACATGGCTGT+GGG | + | chr3.2:77894140-77894159 | None:intergenic | 35.0% | |
| CCATACTGTTAAGAGGATAA+TGG | + | chr3.2:77894334-77894353 | None:intergenic | 35.0% | |
| CCATTATCCTCTTAACAGTA+TGG | - | chr3.2:77894331-77894350 | MS.gene057235:intron | 35.0% | |
| CGAAGGTAAATGTCAAATAC+AGG | + | chr3.2:77896959-77896978 | None:intergenic | 35.0% | |
| CTGAACTCAATCATGTTTAC+TGG | + | chr3.2:77894022-77894041 | None:intergenic | 35.0% | |
| GAGCCAATATTACAGAAAGT+AGG | - | chr3.2:77896998-77897017 | MS.gene057235:intron | 35.0% | |
| GATATTAGTCGGAGCTTAAT+GGG | + | chr3.2:77894909-77894928 | None:intergenic | 35.0% | |
| GCAAAAGTTTGTAAGATCTG+CGG | + | chr3.2:77896261-77896280 | None:intergenic | 35.0% | |
| TACAGTCCATTCAAAGGAAA+AGG | + | chr3.2:77894170-77894189 | None:intergenic | 35.0% | |
| TATGAGTGGCGTAAATAACT+TGG | - | chr3.2:77895531-77895550 | MS.gene057235:CDS | 35.0% | |
| TCTCTTCTATACTTCTGTCT+TGG | - | chr3.2:77894428-77894447 | MS.gene057235:CDS | 35.0% | |
| TCTGATTCTCTTATATCAGC+GGG | + | chr3.2:77893737-77893756 | None:intergenic | 35.0% | |
| TGATATTAGTCGGAGCTTAA+TGG | + | chr3.2:77894910-77894929 | None:intergenic | 35.0% | |
| TTAAGTGAGGATGAACATCT+GGG | - | chr3.2:77897057-77897076 | MS.gene057235:intron | 35.0% | |
| TTCATTCTGCAGTAGATCTT+TGG | - | chr3.2:77896605-77896624 | MS.gene057235:intron | 35.0% | |
| ! | AAAGTATTATCTTGCAGGTG+AGG | - | chr3.2:77896425-77896444 | MS.gene057235:intron | 35.0% |
| ! | ACTTTGATGGTTGTCGATTA+AGG | - | chr3.2:77894558-77894577 | MS.gene057235:intron | 35.0% |
| ! | CTTTGATGGTTGTCGATTAA+GGG | - | chr3.2:77894559-77894578 | MS.gene057235:intron | 35.0% |
| ! | TATTTTCTGCTCCATATGAG+TGG | - | chr3.2:77895517-77895536 | MS.gene057235:CDS | 35.0% |
| ! | TCTGAGGTGAAAACTTTCTT+CGG | - | chr3.2:77894607-77894626 | MS.gene057235:intron | 35.0% |
| ! | TTTTCTCGCACAATCTATGT+TGG | - | chr3.2:77893704-77893723 | MS.gene057235:intron | 35.0% |
| ! | TTTTTCACAGATTCGGAAAC+TGG | - | chr3.2:77896068-77896087 | MS.gene057235:intron | 35.0% |
| !! | GTGAAGGTACACATTCATTT+TGG | - | chr3.2:77895422-77895441 | MS.gene057235:intron | 35.0% |
| !!! | AAGCATGGATTCTTTTTTGC+AGG | - | chr3.2:77897203-77897222 | MS.gene057235:CDS | 35.0% |
| !!! | ATACTGCTCTTTTTTGCTCA+GGG | - | chr3.2:77895911-77895930 | MS.gene057235:intron | 35.0% |
| AATGTGTACCTTCACTGTCA+CGG | + | chr3.2:77895417-77895436 | None:intergenic | 40.0% | |
| ACAAGCGATGTCTACTAACA+TGG | + | chr3.2:77895703-77895722 | None:intergenic | 40.0% | |
| ACACACCTCGAAATTCAGAA+TGG | + | chr3.2:77894786-77894805 | None:intergenic | 40.0% | |
| ACACCGAGTTTAGAAATCCT+TGG | - | chr3.2:77896094-77896113 | MS.gene057235:intron | 40.0% | |
| ACCTACAACAAGAGCAGATT+AGG | + | chr3.2:77894637-77894656 | None:intergenic | 40.0% | |
| AGATGCTGAAGATGCAATTC+GGG | - | chr3.2:77894520-77894539 | MS.gene057235:intron | 40.0% | |
| AGTCCATTCAAAGGAAAAGG+AGG | + | chr3.2:77894167-77894186 | None:intergenic | 40.0% | |
| AGTTTAGGGACTAAGTCTGT+GGG | - | chr3.2:77895779-77895798 | MS.gene057235:intron | 40.0% | |
| ATTTCGAGGTGTGTCTATTC+AGG | - | chr3.2:77894792-77894811 | MS.gene057235:intron | 40.0% | |
| CAAAACTCCCAATGGTGTAA+AGG | + | chr3.2:77893894-77893913 | None:intergenic | 40.0% | |
| CAAGCGACAGCTATAACTAA+GGG | + | chr3.2:77894229-77894248 | None:intergenic | 40.0% | |
| CACCGAGTTTAGAAATCCTT+GGG | - | chr3.2:77896095-77896114 | MS.gene057235:intron | 40.0% | |
| CAGAAAGTCACAATACCTTC+TGG | + | chr3.2:77896518-77896537 | None:intergenic | 40.0% | |
| CGTGATGGTTACAACTTTGA+TGG | - | chr3.2:77894545-77894564 | MS.gene057235:intron | 40.0% | |
| CTAACGCAGTCATGTTTCAA+TGG | - | chr3.2:77894304-77894323 | MS.gene057235:intron | 40.0% | |
| CTTGGGCGAGATCATATATT+CGG | - | chr3.2:77896112-77896131 | MS.gene057235:intron | 40.0% | |
| GAGATGCTGAAGATGCAATT+CGG | - | chr3.2:77894519-77894538 | MS.gene057235:intron | 40.0% | |
| GCAAAAAAGAGCAGTATGAG+TGG | + | chr3.2:77895908-77895927 | None:intergenic | 40.0% | |
| GCAAACTACAGTCCATTCAA+AGG | + | chr3.2:77894176-77894195 | None:intergenic | 40.0% | |
| TAGTTTAGGGACTAAGTCTG+TGG | - | chr3.2:77895778-77895797 | MS.gene057235:intron | 40.0% | |
| TCAAGCGACAGCTATAACTA+AGG | + | chr3.2:77894230-77894249 | None:intergenic | 40.0% | |
| TTAACAGTATGGCCGCATAA+TGG | - | chr3.2:77894342-77894361 | MS.gene057235:intron | 40.0% | |
| TTGGGCGAGATCATATATTC+GGG | - | chr3.2:77896113-77896132 | MS.gene057235:intron | 40.0% | |
| TTTCGAGGTGTGTCTATTCA+GGG | - | chr3.2:77894793-77894812 | MS.gene057235:intron | 40.0% | |
| ! | ACGATATTCGTTTTGCTGGA+AGG | - | chr3.2:77896020-77896039 | MS.gene057235:intron | 40.0% |
| ! | ATGGTTGTCGATTAAGGGTA+TGG | - | chr3.2:77894564-77894583 | MS.gene057235:intron | 40.0% |
| ! | CGATATTCGTTTTGCTGGAA+GGG | - | chr3.2:77896021-77896040 | MS.gene057235:intron | 40.0% |
| ! | TAATCTGCTCTTGTTGTAGG+TGG | - | chr3.2:77894636-77894655 | MS.gene057235:intron | 40.0% |
| ! | TGACCTCCTTTTCCTTTGAA+TGG | - | chr3.2:77894161-77894180 | MS.gene057235:intron | 40.0% |
| ! | TGGTTGTCGATTAAGGGTAT+GGG | - | chr3.2:77894565-77894584 | MS.gene057235:intron | 40.0% |
| ! | TGTCACTTGATGTTTGAGTG+CGG | - | chr3.2:77896349-77896368 | MS.gene057235:intron | 40.0% |
| !! | GAACTGAAAGCACCATAACA+TGG | + | chr3.2:77893809-77893828 | None:intergenic | 40.0% |
| !!! | CATACTGCTCTTTTTTGCTC+AGG | - | chr3.2:77895910-77895929 | MS.gene057235:intron | 40.0% |
| !!! | CTTTTTTGCTCAGGGACTTT+TGG | - | chr3.2:77895919-77895938 | MS.gene057235:intron | 40.0% |
| !!! | TCTTTTTTGCAGGTTCTGTC+TGG | - | chr3.2:77897213-77897232 | MS.gene057235:CDS | 40.0% |
| AAACAATAACATGGAGGGCG+AGG | + | chr3.2:77894388-77894407 | None:intergenic | 45.0% | |
| AACTCCCAATGGTGTAAAGG+TGG | + | chr3.2:77893891-77893910 | None:intergenic | 45.0% | |
| AATGGCGAGAGACACCAAAA+CGG | + | chr3.2:77894768-77894787 | None:intergenic | 45.0% | |
| ACTCCCAATGGTGTAAAGGT+GGG | + | chr3.2:77893890-77893909 | None:intergenic | 45.0% | |
| AGCTTCAAGGGTCAATGTGT+GGG | - | chr3.2:77894266-77894285 | MS.gene057235:CDS | 45.0% | |
| AGTATGAGAGCAGTCGTTCA+AGG | - | chr3.2:77896449-77896468 | MS.gene057235:intron | 45.0% | |
| ATATACCTGGCAGGCTTGAT+TGG | + | chr3.2:77896687-77896706 | None:intergenic | 45.0% | |
| ATGTGTACCTTCACTGTCAC+GGG | + | chr3.2:77895416-77895435 | None:intergenic | 45.0% | |
| ATTCTCTTATATCAGCGGGC+AGG | + | chr3.2:77893733-77893752 | None:intergenic | 45.0% | |
| CAGGATCATATGCGAAAAGC+TGG | - | chr3.2:77895367-77895386 | MS.gene057235:intron | 45.0% | |
| CGAATATATGATCTCGCCCA+AGG | + | chr3.2:77896114-77896133 | None:intergenic | 45.0% | |
| CGCCCAAGGATTTCTAAACT+CGG | + | chr3.2:77896100-77896119 | None:intergenic | 45.0% | |
| GAACCCACCTTTACACCATT+GGG | - | chr3.2:77893884-77893903 | MS.gene057235:intron | 45.0% | |
| GATGCTGAAGATGCAATTCG+GGG | - | chr3.2:77894521-77894540 | MS.gene057235:intron | 45.0% | |
| GTCACTTGATGTTTGAGTGC+GGG | - | chr3.2:77896350-77896369 | MS.gene057235:intron | 45.0% | |
| GTTTAGGGACTAAGTCTGTG+GGG | - | chr3.2:77895780-77895799 | MS.gene057235:intron | 45.0% | |
| TAGCTTCAAGGGTCAATGTG+TGG | - | chr3.2:77894265-77894284 | MS.gene057235:CDS | 45.0% | |
| TATGCGGCCATACTGTTAAG+AGG | + | chr3.2:77894341-77894360 | None:intergenic | 45.0% | |
| TCAAGTGACAGACGTGGATA+TGG | - | chr3.2:77894688-77894707 | MS.gene057235:intron | 45.0% | |
| TCTCGCCATTCTGAATTTCG+AGG | - | chr3.2:77894778-77894797 | MS.gene057235:intron | 45.0% | |
| TGATACCTTCAAATCCTGCC+AGG | + | chr3.2:77895268-77895287 | None:intergenic | 45.0% | |
| TGGTGATCTTGGCCTGTAAT+TGG | + | chr3.2:77896781-77896800 | None:intergenic | 45.0% | |
| ! | AAAGGTGGGTTCCAGACAAT+AGG | + | chr3.2:77893876-77893895 | None:intergenic | 45.0% |
| ! | AATAACCCTGTGGTGTCAGA+TGG | - | chr3.2:77895809-77895828 | MS.gene057235:intron | 45.0% |
| ! | CAATACCTTCTGGCCCTTTT+CGG | + | chr3.2:77896508-77896527 | None:intergenic | 45.0% |
| ! | GCCTAATCTGCTCTTGTTGT+AGG | - | chr3.2:77894633-77894652 | MS.gene057235:intron | 45.0% |
| !! | CTTGATTGGTGATGCTGATC+TGG | + | chr3.2:77896673-77896692 | None:intergenic | 45.0% |
| !! | TCAGCTTTAAATACCTGGCG+TGG | + | chr3.2:77896828-77896847 | None:intergenic | 45.0% |
| !!! | TTTAATATATATTGATTTAA+CGG | + | chr3.2:77896928-77896947 | None:intergenic | 5.0% |
| AACATGATCAGCCCCACAAC+TGG | - | chr3.2:77895652-77895671 | MS.gene057235:intron | 50.0% | |
| AATGCCAGACTGACCAGTTG+TGG | + | chr3.2:77895668-77895687 | None:intergenic | 50.0% | |
| ACAACTGGTCAGTCTGGCAT+TGG | - | chr3.2:77895667-77895686 | MS.gene057235:CDS | 50.0% | |
| AGCGATCTGTGTCTAGGTCA+CGG | - | chr3.2:77896628-77896647 | MS.gene057235:intron | 50.0% | |
| AGTGACAGACGTGGATATGG+TGG | - | chr3.2:77894691-77894710 | MS.gene057235:intron | 50.0% | |
| AGTTAGCCATCTGACACCAC+AGG | + | chr3.2:77895818-77895837 | None:intergenic | 50.0% | |
| ATGCCAGACTGACCAGTTGT+GGG | + | chr3.2:77895667-77895686 | None:intergenic | 50.0% | |
| CAGGAGCAGAAGTCCGAAAA+GGG | - | chr3.2:77896492-77896511 | MS.gene057235:intron | 50.0% | |
| CCATCATCAAGTGACAGACG+TGG | - | chr3.2:77894682-77894701 | MS.gene057235:intron | 50.0% | |
| CTGACACCACAGGGTTATTC+TGG | + | chr3.2:77895808-77895827 | None:intergenic | 50.0% | |
| GAAGTTTCCCGTGACAGTGA+AGG | - | chr3.2:77895406-77895425 | MS.gene057235:intron | 50.0% | |
| GCTTCAAGGGTCAATGTGTG+GGG | - | chr3.2:77894267-77894286 | MS.gene057235:CDS | 50.0% | |
| GGAACCCACCTTTACACCAT+TGG | - | chr3.2:77893883-77893902 | MS.gene057235:intron | 50.0% | |
| GTTAGCCATCTGACACCACA+GGG | + | chr3.2:77895817-77895836 | None:intergenic | 50.0% | |
| TGCATCCTGGCAGGATTTGA+AGG | - | chr3.2:77895260-77895279 | MS.gene057235:intron | 50.0% | |
| TGCTGATCTGGATCTGGATC+TGG | + | chr3.2:77896661-77896680 | None:intergenic | 50.0% | |
| TTGCAGGTTCTGTCTGGTAG+CGG | - | chr3.2:77897219-77897238 | MS.gene057235:CDS | 50.0% | |
| ! | CCACGTCTGTCACTTGATGA+TGG | + | chr3.2:77894685-77894704 | None:intergenic | 50.0% |
| ! | GCTGAACGTGATGGTGATCT+TGG | + | chr3.2:77896792-77896811 | None:intergenic | 50.0% |
| ! | TGGTGATGCTGATCTGGATC+TGG | + | chr3.2:77896667-77896686 | None:intergenic | 50.0% |
| !! | CTTTGGAGCGATCTGTGTCT+AGG | - | chr3.2:77896622-77896641 | MS.gene057235:intron | 50.0% |
| AATACCTGGCGTGGTGATCG+TGG | + | chr3.2:77896819-77896838 | None:intergenic | 55.0% | |
| CAATAACATGGAGGGCGAGG+AGG | + | chr3.2:77894385-77894404 | None:intergenic | 55.0% | |
| CATCACCAATCAAGCCTGCC+AGG | - | chr3.2:77896679-77896698 | MS.gene057235:intron | 55.0% | |
| CCTGCCAGGATGCAGAAGAT+GGG | + | chr3.2:77895254-77895273 | None:intergenic | 55.0% | |
| GAAGTCCGAAAAGGGCCAGA+AGG | - | chr3.2:77896500-77896519 | MS.gene057235:intron | 55.0% | |
| GACAGACGTGGATATGGTGG+TGG | - | chr3.2:77894694-77894713 | MS.gene057235:intron | 55.0% | |
| GACTCCCATCTTCTGCATCC+TGG | - | chr3.2:77895247-77895266 | MS.gene057235:intron | 55.0% | |
| GATGCAATTCGGGGTCGTGA+TGG | - | chr3.2:77894530-77894549 | MS.gene057235:intron | 55.0% | |
| GCAGGAGCAGAAGTCCGAAA+AGG | - | chr3.2:77896491-77896510 | MS.gene057235:intron | 55.0% | |
| TCCTGCCAGGATGCAGAAGA+TGG | + | chr3.2:77895255-77895274 | None:intergenic | 55.0% | |
| TGCCAGACTGACCAGTTGTG+GGG | + | chr3.2:77895666-77895685 | None:intergenic | 55.0% | |
| TTCGGACTTCTGCTCCTGCT+GGG | + | chr3.2:77896490-77896509 | None:intergenic | 55.0% | |
| TTGTAGGTGGAGCTTGCCCA+TGG | - | chr3.2:77894649-77894668 | MS.gene057235:intron | 55.0% | |
| TTTCGGACTTCTGCTCCTGC+TGG | + | chr3.2:77896491-77896510 | None:intergenic | 55.0% | |
| ! | GGGGTACCAGAATAACCCTG+TGG | - | chr3.2:77895799-77895818 | MS.gene057235:intron | 55.0% |
| !! | AGACGTGGATATGGTGGTGG+TGG | - | chr3.2:77894697-77894716 | MS.gene057235:intron | 55.0% |
| AGCCCCACAACTGGTCAGTC+TGG | - | chr3.2:77895661-77895680 | MS.gene057235:CDS | 60.0% | |
| AGCTTGCCCATGGAGGCAGA+GGG | - | chr3.2:77894659-77894678 | MS.gene057235:intron | 60.0% | |
| ATGATGGCCCTCTGCCTCCA+TGG | + | chr3.2:77894669-77894688 | None:intergenic | 60.0% | |
| CCCATCTTCTGCATCCTGGC+AGG | - | chr3.2:77895251-77895270 | MS.gene057235:intron | 60.0% | |
| CGTGGAGACGCTGAACGTGA+TGG | + | chr3.2:77896801-77896820 | None:intergenic | 60.0% | |
| GGCTTGAGGCTCCCCTCAAA+TGG | - | chr3.2:77895604-77895623 | MS.gene057235:intron | 60.0% | |
| TAGGTGGAGCTTGCCCATGG+AGG | - | chr3.2:77894652-77894671 | MS.gene057235:intron | 60.0% | |
| TCGGACTTCTGCTCCTGCTG+GGG | + | chr3.2:77896489-77896508 | None:intergenic | 60.0% | |
| TGATGGCCCTCTGCCTCCAT+GGG | + | chr3.2:77894668-77894687 | None:intergenic | 60.0% | |
| !! | CGTGGATATGGTGGTGGTGG+CGG | - | chr3.2:77894700-77894719 | MS.gene057235:intron | 60.0% |
| GAGCTTGCCCATGGAGGCAG+AGG | - | chr3.2:77894658-77894677 | MS.gene057235:intron | 65.0% | |
| GTCTCCACGATCACCACGCC+AGG | - | chr3.2:77896812-77896831 | MS.gene057235:intron | 65.0% | |
| TCCTGCTGGGGCTTCTGCTG+CGG | + | chr3.2:77896477-77896496 | None:intergenic | 65.0% | |
| !! | GGATATGGTGGTGGTGGCGG+CGG | - | chr3.2:77894703-77894722 | MS.gene057235:intron | 65.0% |
| !! | TATGGTGGTGGTGGCGGCGG+TGG | - | chr3.2:77894706-77894725 | MS.gene057235:intron | 70.0% |
| !!! | GGTGCTGGTGGGGGCCGTTT+TGG | - | chr3.2:77894751-77894770 | MS.gene057235:intron | 70.0% |
| GCCGCAGCAGAAGCCCCAGC+AGG | - | chr3.2:77896473-77896492 | MS.gene057235:intron | 75.0% | |
| !! | CGGCGGTGACGGTGCTGGTG+GGG | - | chr3.2:77894741-77894760 | MS.gene057235:intron | 75.0% |
| !! | GCGGCGGTGACGGTGCTGGT+GGG | - | chr3.2:77894740-77894759 | MS.gene057235:intron | 75.0% |
| !! | GGCGGTGACGGTGCTGGTGG+GGG | - | chr3.2:77894742-77894761 | MS.gene057235:intron | 75.0% |
| ! | GGCAGAGGCGGCGGCGGTGA+CGG | - | chr3.2:77894730-77894749 | MS.gene057235:intron | 80.0% |
| !! | GGCGGCGGTGACGGTGCTGG+TGG | - | chr3.2:77894739-77894758 | MS.gene057235:intron | 80.0% |
| !! | GGCGGCGGTGGTGGCAGAGG+CGG | - | chr3.2:77894718-77894737 | MS.gene057235:intron | 80.0% |
| !! | GGCGGTGGTGGCAGAGGCGG+CGG | - | chr3.2:77894721-77894740 | MS.gene057235:intron | 80.0% |
| !! | GGTGGCGGCGGTGGTGGCAG+AGG | - | chr3.2:77894715-77894734 | MS.gene057235:intron | 80.0% |
| !! | GGTGGTGGCAGAGGCGGCGG+CGG | - | chr3.2:77894724-77894743 | MS.gene057235:intron | 80.0% |
| !!! | GGTGGTGGTGGCGGCGGTGG+TGG | - | chr3.2:77894709-77894728 | MS.gene057235:intron | 80.0% |
| !! | GGCGGCGGCGGTGACGGTGC+TGG | - | chr3.2:77894736-77894755 | MS.gene057235:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 77893692 | 77897245 | 77893692 | ID=MS.gene057235 |
| chr3.2 | mRNA | 77893692 | 77897245 | 77893692 | ID=MS.gene057235.t1;Parent=MS.gene057235 |
| chr3.2 | exon | 77897159 | 77897245 | 77897159 | ID=MS.gene057235.t1.exon1;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77897159 | 77897245 | 77897159 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77896523 | 77896588 | 77896523 | ID=MS.gene057235.t1.exon2;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77896523 | 77896588 | 77896523 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77896357 | 77896431 | 77896357 | ID=MS.gene057235.t1.exon3;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77896357 | 77896431 | 77896357 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77896138 | 77896282 | 77896138 | ID=MS.gene057235.t1.exon4;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77896138 | 77896282 | 77896138 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77895656 | 77895702 | 77895656 | ID=MS.gene057235.t1.exon5;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77895656 | 77895702 | 77895656 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77895510 | 77895567 | 77895510 | ID=MS.gene057235.t1.exon6;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77895510 | 77895567 | 77895510 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77894956 | 77895005 | 77894956 | ID=MS.gene057235.t1.exon7;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77894956 | 77895005 | 77894956 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77894803 | 77894859 | 77894803 | ID=MS.gene057235.t1.exon8;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77894803 | 77894859 | 77894803 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77894416 | 77894495 | 77894416 | ID=MS.gene057235.t1.exon9;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77894416 | 77894495 | 77894416 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77894237 | 77894320 | 77894237 | ID=MS.gene057235.t1.exon10;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77894237 | 77894320 | 77894237 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77894104 | 77894149 | 77894104 | ID=MS.gene057235.t1.exon11;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77894104 | 77894149 | 77894104 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| chr3.2 | exon | 77893692 | 77893712 | 77893692 | ID=MS.gene057235.t1.exon12;Parent=MS.gene057235.t1 |
| chr3.2 | CDS | 77893692 | 77893712 | 77893692 | ID=cds.MS.gene057235.t1;Parent=MS.gene057235.t1 |
| Gene Sequence |
| Protein sequence |
