Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57391.t1 | XP_003630279.1 | 100 | 143 | 0 | 0 | 1 | 143 | 1 | 143 | 2.50E-73 | 284.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57391.t1 | Q9XHS0 | 72.5 | 142 | 39 | 0 | 1 | 142 | 1 | 142 | 2.4e-53 | 209.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57391.t1 | G7LE33 | 100.0 | 143 | 0 | 0 | 1 | 143 | 1 | 143 | 1.8e-73 | 284.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050252 | MS.gene57391 | 0.847815 | 9.11E-60 | -1.69E-46 |
| MS.gene050290 | MS.gene57391 | 0.905556 | 3.79E-80 | -1.69E-46 |
| MS.gene050916 | MS.gene57391 | 0.810735 | 9.94E-51 | -1.69E-46 |
| MS.gene051746 | MS.gene57391 | 0.817684 | 2.90E-52 | -1.69E-46 |
| MS.gene051748 | MS.gene57391 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene051850 | MS.gene57391 | 0.819894 | 9.14E-53 | -1.69E-46 |
| MS.gene051903 | MS.gene57391 | 0.859818 | 3.18E-63 | -1.69E-46 |
| MS.gene053109 | MS.gene57391 | 0.806697 | 7.25E-50 | -1.69E-46 |
| MS.gene053952 | MS.gene57391 | 0.839752 | 1.31E-57 | -1.69E-46 |
| MS.gene054733 | MS.gene57391 | 0.805182 | 1.51E-49 | -1.69E-46 |
| MS.gene054937 | MS.gene57391 | 0.904226 | 1.53E-79 | -1.69E-46 |
| MS.gene056075 | MS.gene57391 | 0.840827 | 6.88E-58 | -1.69E-46 |
| MS.gene056917 | MS.gene57391 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene057052 | MS.gene57391 | 0.834587 | 2.75E-56 | -1.69E-46 |
| MS.gene057092 | MS.gene57391 | 0.813992 | 1.93E-51 | -1.69E-46 |
| MS.gene057094 | MS.gene57391 | 0.855078 | 8.03E-62 | -1.69E-46 |
| MS.gene057206 | MS.gene57391 | 0.819997 | 8.66E-53 | -1.69E-46 |
| MS.gene057235 | MS.gene57391 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene058245 | MS.gene57391 | 0.801838 | 7.45E-49 | -1.69E-46 |
| MS.gene058354 | MS.gene57391 | 0.805625 | 1.22E-49 | -1.69E-46 |
| MS.gene058364 | MS.gene57391 | 0.815614 | 8.45E-52 | -1.69E-46 |
| MS.gene059726 | MS.gene57391 | 0.812059 | 5.13E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene57391 | 0.83514 | 2.00E-56 | -1.69E-46 |
| MS.gene060574 | MS.gene57391 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene060856 | MS.gene57391 | 0.859471 | 4.04E-63 | -1.69E-46 |
| MS.gene061145 | MS.gene57391 | 0.867441 | 1.37E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57391 | MS.gene053443 | PPI |
| MS.gene57391 | MS.gene034249 | PPI |
| MS.gene57391 | MS.gene09780 | PPI |
| MS.gene57391 | MS.gene015411 | PPI |
| MS.gene57391 | MS.gene073888 | PPI |
| MS.gene57391 | MS.gene03201 | PPI |
| MS.gene57391 | MS.gene02572 | PPI |
| MS.gene57391 | MS.gene09762 | PPI |
| MS.gene57391 | MS.gene053224 | PPI |
| MS.gene53517 | MS.gene57391 | PPI |
| MS.gene57391 | MS.gene70215 | PPI |
| MS.gene57391 | MS.gene000610 | PPI |
| MS.gene57391 | MS.gene46264 | PPI |
| MS.gene57391 | MS.gene28384 | PPI |
| MS.gene57391 | MS.gene030614 | PPI |
| MS.gene02807 | MS.gene57391 | PPI |
| MS.gene57391 | MS.gene025830 | PPI |
| MS.gene013786 | MS.gene57391 | PPI |
| MS.gene030614 | MS.gene57391 | PPI |
| MS.gene57391 | MS.gene09779 | PPI |
| MS.gene57391 | MS.gene65180 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57391.t1 | MTR_8g093770 | 100.000 | 143 | 0 | 0 | 1 | 143 | 1 | 143 | 1.51e-102 | 290 |
| MS.gene57391.t1 | MTR_5g012890 | 96.000 | 125 | 5 | 0 | 19 | 143 | 18 | 142 | 1.01e-86 | 249 |
| MS.gene57391.t1 | MTR_4g006830 | 88.889 | 144 | 15 | 1 | 1 | 143 | 1 | 144 | 2.91e-83 | 241 |
| MS.gene57391.t1 | MTR_5g012890 | 91.111 | 90 | 8 | 0 | 19 | 108 | 18 | 107 | 1.38e-56 | 172 |
| MS.gene57391.t1 | MTR_4g073510 | 66.667 | 54 | 17 | 1 | 1 | 53 | 1 | 54 | 3.27e-15 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57391.t1 | AT2G32060 | 76.000 | 125 | 29 | 1 | 19 | 143 | 21 | 144 | 1.29e-67 | 201 |
| MS.gene57391.t1 | AT2G32060 | 76.000 | 125 | 29 | 1 | 19 | 143 | 21 | 144 | 1.29e-67 | 201 |
| MS.gene57391.t1 | AT2G32060 | 76.000 | 125 | 29 | 1 | 19 | 143 | 21 | 144 | 1.29e-67 | 201 |
| MS.gene57391.t1 | AT1G15930 | 74.400 | 125 | 31 | 1 | 19 | 143 | 21 | 144 | 3.49e-64 | 192 |
| MS.gene57391.t1 | AT1G15930 | 74.400 | 125 | 31 | 1 | 19 | 143 | 21 | 144 | 3.49e-64 | 192 |
Find 33 sgRNAs with CRISPR-Local
Find 100 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCAACTTGACGTAATC+AGG | 0.299059 | 4.2:-9046887 | None:intergenic |
| TCTCCAAGGGTCTTTGCATT+TGG | 0.313809 | 4.2:-9046950 | None:intergenic |
| GTTGCTGCAGCTGGAATTCC+AGG | 0.331115 | 4.2:+9046716 | MS.gene57391:CDS |
| AATCAACTTGCAATTATGTC+TGG | 0.359633 | 4.2:+9046098 | None:intergenic |
| ATTCCAGCTGCAGCAACAAC+TGG | 0.406602 | 4.2:-9046710 | None:intergenic |
| TGCAAAGACCCTTGGAGAAT+GGG | 0.412944 | 4.2:+9046955 | MS.gene57391:CDS |
| ATAATATCCATTGGCTCCCC+TGG | 0.419454 | 4.2:-9046734 | None:intergenic |
| GAGCCAGTTGTTGCTGCAGC+TGG | 0.425162 | 4.2:+9046707 | MS.gene57391:CDS |
| TTGAGAAAGTCACGCGCTTA+TGG | 0.428624 | 4.2:+9046776 | MS.gene57391:CDS |
| GACACTGTGTTCAGCACAAA+GGG | 0.447539 | 4.2:-9046912 | None:intergenic |
| ATGCAAAGACCCTTGGAGAA+TGG | 0.451113 | 4.2:+9046954 | MS.gene57391:CDS |
| GGAAAAGCTAGGAAGGTAAC+TGG | 0.463250 | 4.2:+9047660 | MS.gene57391:CDS |
| TTGCTCCTGTGTGGTTGTCA+AGG | 0.525394 | 4.2:+9047683 | MS.gene57391:CDS |
| GTTCCAAATGCAAAGACCCT+TGG | 0.532260 | 4.2:+9046947 | MS.gene57391:CDS |
| TTGCTGCAGCTGGAATTCCA+GGG | 0.537879 | 4.2:+9046717 | MS.gene57391:CDS |
| ATCAACTTGCAATTATGTCT+GGG | 0.539041 | 4.2:+9046099 | None:intergenic |
| TTGTGCAAAATTGATTCAGA+AGG | 0.565495 | 4.2:+9047639 | MS.gene57391:CDS |
| ACTGCAGTCATAATATCCAT+TGG | 0.568889 | 4.2:-9046743 | None:intergenic |
| TGCTGCAGCTGGAATTCCAG+GGG | 0.575795 | 4.2:+9046718 | MS.gene57391:CDS |
| TTGATTCAGAAGGAAAAGCT+AGG | 0.578774 | 4.2:+9047649 | MS.gene57391:CDS |
| ACAGCTCTGTGTTCTTGCTG+AGG | 0.587565 | 4.2:+9046853 | MS.gene57391:CDS |
| CCAACCTGATTACGTCAAGT+TGG | 0.591510 | 4.2:+9046883 | MS.gene57391:CDS |
| TTACACCAGCCCATTCTCCA+AGG | 0.592149 | 4.2:-9046964 | None:intergenic |
| TTCAGAAGGAAAAGCTAGGA+AGG | 0.596975 | 4.2:+9047653 | MS.gene57391:CDS |
| TGGAATTCCAGGGGAGCCAA+TGG | 0.602144 | 4.2:+9046727 | MS.gene57391:CDS |
| AGAAAGTCACGCGCTTATGG+TGG | 0.613205 | 4.2:+9046779 | MS.gene57391:CDS |
| CCAACTTGACGTAATCAGGT+TGG | 0.614249 | 4.2:-9046883 | None:intergenic |
| AAGACCCTTGGAGAATGGGC+TGG | 0.615483 | 4.2:+9046959 | MS.gene57391:CDS |
| TGACACTGTGTTCAGCACAA+AGG | 0.628583 | 4.2:-9046913 | None:intergenic |
| GCTTATGGTGGTCTTGCACG+TGG | 0.635715 | 4.2:+9046791 | MS.gene57391:CDS |
| GGTAACTGGTTGCTCCTGTG+TGG | 0.641819 | 4.2:+9047674 | MS.gene57391:CDS |
| TACACCAGCCCATTCTCCAA+GGG | 0.643748 | 4.2:-9046963 | None:intergenic |
| ACATACCTTGACAACCACAC+AGG | 0.682837 | 4.2:-9047688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAATTGAGAATTG+TGG | - | chr4.2:9047045-9047064 | None:intergenic | 15.0% |
| !! | CATATAGATTAAAATAAATG+AGG | - | chr4.2:9047511-9047530 | None:intergenic | 15.0% |
| !! | TATAAAATGTTATTGCTTAT+TGG | - | chr4.2:9047188-9047207 | None:intergenic | 15.0% |
| !!! | AATTACTTTAAAATAAGTGT+GGG | + | chr4.2:9047080-9047099 | MS.gene57391:intron | 15.0% |
| !!! | TTAACTATTTTCATTTTTGT+AGG | + | chr4.2:9047767-9047786 | MS.gene57391:intron | 15.0% |
| !!! | TTATAATAACTTTTTGATCT+GGG | - | chr4.2:9046494-9046513 | None:intergenic | 15.0% |
| !!! | TTTATAATAACTTTTTGATC+TGG | - | chr4.2:9046495-9046514 | None:intergenic | 15.0% |
| !! | AATAGTTAAGCATACATAAA+CGG | - | chr4.2:9047756-9047775 | None:intergenic | 20.0% |
| !! | ATTGATTATGAGGATAATTA+TGG | + | chr4.2:9046442-9046461 | MS.gene57391:intron | 20.0% |
| !! | CAAAACCAATATAAAACAAA+AGG | - | chr4.2:9047421-9047440 | None:intergenic | 20.0% |
| !!! | ATTTGCCTTTTGTTTTATAT+TGG | + | chr4.2:9047413-9047432 | MS.gene57391:intron | 20.0% |
| !!! | GAATTACTTTAAAATAAGTG+TGG | + | chr4.2:9047079-9047098 | MS.gene57391:intron | 20.0% |
| !!! | TTTTCATTTTTGTAGGATTT+CGG | + | chr4.2:9047774-9047793 | MS.gene57391:intron | 20.0% |
| ! | AAATTCAGAAGTTATTGTCT+TGG | + | chr4.2:9047547-9047566 | MS.gene57391:intron | 25.0% |
| ! | ACAAAAAGTTTCTCTATAGT+CGG | - | chr4.2:9046577-9046596 | None:intergenic | 25.0% |
| ! | CTATGTTTATAGTAATGCAA+GGG | - | chr4.2:9046993-9047012 | None:intergenic | 25.0% |
| ! | GACAATAACTTCTGAATTTA+AGG | - | chr4.2:9047546-9047565 | None:intergenic | 25.0% |
| ! | TCAAATATGTCATAAGGAAA+TGG | - | chr4.2:9047022-9047041 | None:intergenic | 25.0% |
| ! | TCTATGTTTATAGTAATGCA+AGG | - | chr4.2:9046994-9047013 | None:intergenic | 25.0% |
| !!! | AGTACTGATATTGAAATAGT+TGG | + | chr4.2:9046286-9046305 | MS.gene57391:intron | 25.0% |
| ATTTCTTATAGTTACTACCG+AGG | - | chr4.2:9046328-9046347 | None:intergenic | 30.0% | |
| CGGTTTCATTAATTGCTTAT+TGG | - | chr4.2:9047161-9047180 | None:intergenic | 30.0% | |
| GAATCCAAACATTTCTATTC+CGG | - | chr4.2:9047721-9047740 | None:intergenic | 30.0% | |
| TGTTGTTCAGTTATTGTTTC+TGG | + | chr4.2:9047345-9047364 | MS.gene57391:intron | 30.0% | |
| TTGTGGTCAAATATGTCATA+AGG | - | chr4.2:9047028-9047047 | None:intergenic | 30.0% | |
| TTTCTTATAGTTACTACCGA+GGG | - | chr4.2:9046327-9046346 | None:intergenic | 30.0% | |
| ! | AACTTCTGAATTTAAGGCAA+AGG | - | chr4.2:9047540-9047559 | None:intergenic | 30.0% |
| ! | TGTGAGATTCTACTTGTTAA+TGG | + | chr4.2:9046151-9046170 | MS.gene57391:intron | 30.0% |
| ! | TTGTGCAAAATTGATTCAGA+AGG | + | chr4.2:9047639-9047658 | MS.gene57391:CDS | 30.0% |
| !! | AACTTTTTGATCTGGGATTA+AGG | - | chr4.2:9046487-9046506 | None:intergenic | 30.0% |
| !! | AAGGTTGTACACTATTTCTA+TGG | - | chr4.2:9047281-9047300 | None:intergenic | 30.0% |
| ACAAGTAGAATCTCACAAAC+AGG | - | chr4.2:9046148-9046167 | None:intergenic | 35.0% | |
| ACTGCAGTCATAATATCCAT+TGG | - | chr4.2:9046746-9046765 | None:intergenic | 35.0% | |
| ATGGTCAAATGAAGCTAATG+AGG | + | chr4.2:9046461-9046480 | MS.gene57391:intron | 35.0% | |
| TCATCCGGAATAGAAATGTT+TGG | + | chr4.2:9047714-9047733 | MS.gene57391:intron | 35.0% | |
| TCATTTCATGCATCACAGTT+AGG | - | chr4.2:9047246-9047265 | None:intergenic | 35.0% | |
| TTGATTCAGAAGGAAAAGCT+AGG | + | chr4.2:9047649-9047668 | MS.gene57391:CDS | 35.0% | |
| ! | AATTTTGCACAACTGCATGA+AGG | - | chr4.2:9047631-9047650 | None:intergenic | 35.0% |
| ! | CATTGCGATCATTGATTATG+AGG | + | chr4.2:9046432-9046451 | MS.gene57391:intron | 35.0% |
| ! | GTCAAGGTATGTTTTTCATC+CGG | + | chr4.2:9047699-9047718 | MS.gene57391:intron | 35.0% |
| ! | TGTTATTGCTTATTGGTGCT+CGG | - | chr4.2:9047181-9047200 | None:intergenic | 35.0% |
| !! | ATTGTTTCTGGTGTATTCCT+TGG | + | chr4.2:9047357-9047376 | MS.gene57391:intron | 35.0% |
| !! | TTGTTTCTGGTGTATTCCTT+GGG | + | chr4.2:9047358-9047377 | MS.gene57391:intron | 35.0% |
| AAAAACTCAAGACGCACACA+TGG | - | chr4.2:9046614-9046633 | None:intergenic | 40.0% | |
| ATTGGCACCTCTCATGATTA+GGG | - | chr4.2:9047143-9047162 | None:intergenic | 40.0% | |
| CAACCTTTGAATGTCAAGAG+CGG | + | chr4.2:9047294-9047313 | MS.gene57391:intron | 40.0% | |
| TATTGGCACCTCTCATGATT+AGG | - | chr4.2:9047144-9047163 | None:intergenic | 40.0% | |
| TTCACCAACTTGACGTAATC+AGG | - | chr4.2:9046890-9046909 | None:intergenic | 40.0% | |
| TTCAGAAGGAAAAGCTAGGA+AGG | + | chr4.2:9047653-9047672 | MS.gene57391:CDS | 40.0% | |
| TTTCATGCATCACAGTTAGG+AGG | - | chr4.2:9047243-9047262 | None:intergenic | 40.0% | |
| ! | ATTTTTGTAGGATTTCGGCG+AGG | + | chr4.2:9047779-9047798 | MS.gene57391:intron | 40.0% |
| ACAGAGTTCAGAGAGGATAC+AGG | - | chr4.2:9047486-9047505 | None:intergenic | 45.0% | |
| ACATACCTTGACAACCACAC+AGG | - | chr4.2:9047691-9047710 | None:intergenic | 45.0% | |
| AGAGAGGATACAGGGTAAGA+GGG | - | chr4.2:9047477-9047496 | None:intergenic | 45.0% | |
| ATCCTGACCCTAATCATGAG+AGG | + | chr4.2:9047133-9047152 | MS.gene57391:intron | 45.0% | |
| ATGCAAAGACCCTTGGAGAA+TGG | + | chr4.2:9046954-9046973 | MS.gene57391:CDS | 45.0% | |
| CAGAGTTCAGAGAGGATACA+GGG | - | chr4.2:9047485-9047504 | None:intergenic | 45.0% | |
| CCAACCTGATTACGTCAAGT+TGG | + | chr4.2:9046883-9046902 | MS.gene57391:CDS | 45.0% | |
| CCAACTTGACGTAATCAGGT+TGG | - | chr4.2:9046886-9046905 | None:intergenic | 45.0% | |
| GACACTGTGTTCAGCACAAA+GGG | - | chr4.2:9046915-9046934 | None:intergenic | 45.0% | |
| GATCTGATAGTCATAGCCCT+CGG | + | chr4.2:9046308-9046327 | MS.gene57391:intron | 45.0% | |
| GATTTGCACCACGATGTTGA+GGG | - | chr4.2:9047116-9047135 | None:intergenic | 45.0% | |
| GGAAAAGCTAGGAAGGTAAC+TGG | + | chr4.2:9047660-9047679 | MS.gene57391:CDS | 45.0% | |
| GTTCCAAATGCAAAGACCCT+TGG | + | chr4.2:9046947-9046966 | MS.gene57391:CDS | 45.0% | |
| TCTCCAAGGGTCTTTGCATT+TGG | - | chr4.2:9046953-9046972 | None:intergenic | 45.0% | |
| TGACACTGTGTTCAGCACAA+AGG | - | chr4.2:9046916-9046935 | None:intergenic | 45.0% | |
| TGAGGTTACAGAGTTCAGAG+AGG | - | chr4.2:9047493-9047512 | None:intergenic | 45.0% | |
| TGCAAAGACCCTTGGAGAAT+GGG | + | chr4.2:9046955-9046974 | MS.gene57391:CDS | 45.0% | |
| TTGAGAAAGTCACGCGCTTA+TGG | + | chr4.2:9046776-9046795 | MS.gene57391:CDS | 45.0% | |
| !! | ATAATATCCATTGGCTCCCC+TGG | - | chr4.2:9046737-9046756 | None:intergenic | 45.0% |
| !!! | AAATTAAAAAATTTAATTTG+TGG | + | chr4.2:9046406-9046425 | MS.gene57391:intron | 5.0% |
| ACAGCTCTGTGTTCTTGCTG+AGG | + | chr4.2:9046853-9046872 | MS.gene57391:CDS | 50.0% | |
| AGAAAGTCACGCGCTTATGG+TGG | + | chr4.2:9046779-9046798 | MS.gene57391:CDS | 50.0% | |
| ATTCCAGCTGCAGCAACAAC+TGG | - | chr4.2:9046713-9046732 | None:intergenic | 50.0% | |
| CACCTCTCATGATTAGGGTC+AGG | - | chr4.2:9047138-9047157 | None:intergenic | 50.0% | |
| CAGAGAGGATACAGGGTAAG+AGG | - | chr4.2:9047478-9047497 | None:intergenic | 50.0% | |
| CCACCGCTCTTGACATTCAA+AGG | - | chr4.2:9047300-9047319 | None:intergenic | 50.0% | |
| CCTTTGAATGTCAAGAGCGG+TGG | + | chr4.2:9047297-9047316 | MS.gene57391:intron | 50.0% | |
| CTGGTGTATTCCTTGGGTCT+GGG | + | chr4.2:9047364-9047383 | MS.gene57391:intron | 50.0% | |
| GAGAGGATACAGGGTAAGAG+GGG | - | chr4.2:9047476-9047495 | None:intergenic | 50.0% | |
| GGATTTGCACCACGATGTTG+AGG | - | chr4.2:9047117-9047136 | None:intergenic | 50.0% | |
| TACACCAGCCCATTCTCCAA+GGG | - | chr4.2:9046966-9046985 | None:intergenic | 50.0% | |
| TATAGTCGGCGAGATTCACG+TGG | - | chr4.2:9046563-9046582 | None:intergenic | 50.0% | |
| TCTGGTGTATTCCTTGGGTC+TGG | + | chr4.2:9047363-9047382 | MS.gene57391:intron | 50.0% | |
| TGACATCTCCCTCAACATCG+TGG | + | chr4.2:9047105-9047124 | MS.gene57391:intron | 50.0% | |
| TGGTGTATTCCTTGGGTCTG+GGG | + | chr4.2:9047365-9047384 | MS.gene57391:intron | 50.0% | |
| TTACACCAGCCCATTCTCCA+AGG | - | chr4.2:9046967-9046986 | None:intergenic | 50.0% | |
| TTGCTCCTGTGTGGTTGTCA+AGG | + | chr4.2:9047683-9047702 | MS.gene57391:CDS | 50.0% | |
| TTGCTGCAGCTGGAATTCCA+GGG | + | chr4.2:9046717-9046736 | MS.gene57391:CDS | 50.0% | |
| AAGACCCTTGGAGAATGGGC+TGG | + | chr4.2:9046959-9046978 | MS.gene57391:CDS | 55.0% | |
| GGTAACTGGTTGCTCCTGTG+TGG | + | chr4.2:9047674-9047693 | MS.gene57391:CDS | 55.0% | |
| GTTGCTGCAGCTGGAATTCC+AGG | + | chr4.2:9046716-9046735 | MS.gene57391:CDS | 55.0% | |
| TGCTGCAGCTGGAATTCCAG+GGG | + | chr4.2:9046718-9046737 | MS.gene57391:CDS | 55.0% | |
| TGGAATTCCAGGGGAGCCAA+TGG | + | chr4.2:9046727-9046746 | MS.gene57391:CDS | 55.0% | |
| TGTATTCCTTGGGTCTGGGG+AGG | + | chr4.2:9047368-9047387 | MS.gene57391:intron | 55.0% | |
| ! | GCTTATGGTGGTCTTGCACG+TGG | + | chr4.2:9046791-9046810 | MS.gene57391:CDS | 55.0% |
| GAGCCAGTTGTTGCTGCAGC+TGG | + | chr4.2:9046707-9046726 | MS.gene57391:CDS | 60.0% | |
| AACCAGCCTCCCCAGACCCA+AGG | - | chr4.2:9047377-9047396 | None:intergenic | 65.0% | |
| TTCCTTGGGTCTGGGGAGGC+TGG | + | chr4.2:9047372-9047391 | MS.gene57391:intron | 65.0% | |
| ! | TGGGTCTGGGGAGGCTGGTT+CGG | + | chr4.2:9047377-9047396 | MS.gene57391:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 9046113 | 9047848 | 9046113 | ID=MS.gene57391 |
| chr4.2 | mRNA | 9046113 | 9047848 | 9046113 | ID=MS.gene57391.t1;Parent=MS.gene57391 |
| chr4.2 | exon | 9046113 | 9046120 | 9046113 | ID=MS.gene57391.t1.exon1;Parent=MS.gene57391.t1 |
| chr4.2 | CDS | 9046113 | 9046120 | 9046113 | ID=cds.MS.gene57391.t1;Parent=MS.gene57391.t1 |
| chr4.2 | exon | 9046685 | 9046982 | 9046685 | ID=MS.gene57391.t1.exon2;Parent=MS.gene57391.t1 |
| chr4.2 | CDS | 9046685 | 9046982 | 9046685 | ID=cds.MS.gene57391.t1;Parent=MS.gene57391.t1 |
| chr4.2 | exon | 9047639 | 9047704 | 9047639 | ID=MS.gene57391.t1.exon3;Parent=MS.gene57391.t1 |
| chr4.2 | CDS | 9047639 | 9047704 | 9047639 | ID=cds.MS.gene57391.t1;Parent=MS.gene57391.t1 |
| chr4.2 | exon | 9047789 | 9047848 | 9047789 | ID=MS.gene57391.t1.exon4;Parent=MS.gene57391.t1 |
| chr4.2 | CDS | 9047789 | 9047848 | 9047789 | ID=cds.MS.gene57391.t1;Parent=MS.gene57391.t1 |
| Gene Sequence |
| Protein sequence |
