Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38046.t1 | XP_003617948.1 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 9.00E-154 | 552.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38046.t1 | P27520 | 96.6 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 7.7e-154 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38046.t1 | G7KEN2 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 6.5e-154 | 552.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38046 | 0.846438 | 2.17E-59 | -1.69E-46 |
| MS.gene049173 | MS.gene38046 | 0.825467 | 4.61E-54 | -1.69E-46 |
| MS.gene049181 | MS.gene38046 | -0.822517 | 2.27E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene38046 | 0.822265 | 2.60E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene38046 | 0.838267 | 3.18E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene38046 | 0.887099 | 1.92E-72 | -1.69E-46 |
| MS.gene049285 | MS.gene38046 | 0.896795 | 2.62E-76 | -1.69E-46 |
| MS.gene049313 | MS.gene38046 | -0.820946 | 5.24E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene38046 | 0.917015 | 8.88E-86 | -1.69E-46 |
| MS.gene049600 | MS.gene38046 | 0.851722 | 7.38E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene38046 | 0.822527 | 2.26E-53 | -1.69E-46 |
| MS.gene04986 | MS.gene38046 | -0.823277 | 1.51E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene38046 | 0.905004 | 6.78E-80 | -1.69E-46 |
| MS.gene050163 | MS.gene38046 | 0.869578 | 2.79E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene38046 | 0.884921 | 1.27E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene38046 | 0.831122 | 2.00E-55 | -1.69E-46 |
| MS.gene050173 | MS.gene38046 | -0.816669 | 4.91E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene38046 | 0.858315 | 8.96E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene38046 | 0.865164 | 7.20E-65 | -1.69E-46 |
| MS.gene050333 | MS.gene38046 | 0.865864 | 4.33E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene38046 | 0.884035 | 2.70E-71 | -1.69E-46 |
| MS.gene050504 | MS.gene38046 | 0.90327 | 4.13E-79 | -1.69E-46 |
| MS.gene050518 | MS.gene38046 | 0.894315 | 2.77E-75 | -1.69E-46 |
| MS.gene050577 | MS.gene38046 | 0.830934 | 2.22E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene38046 | 0.918657 | 1.19E-86 | -1.69E-46 |
| MS.gene050662 | MS.gene38046 | 0.815134 | 1.08E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene38046 | 0.87788 | 4.40E-69 | -1.69E-46 |
| MS.gene050699 | MS.gene38046 | 0.876938 | 9.37E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene38046 | 0.8473 | 1.26E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene38046 | 0.810246 | 1.27E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene38046 | 0.856286 | 3.57E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene38046 | 0.855438 | 6.31E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene38046 | 0.877596 | 5.54E-69 | -1.69E-46 |
| MS.gene05087 | MS.gene38046 | 0.807214 | 5.64E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene38046 | 0.820822 | 5.60E-53 | -1.69E-46 |
| MS.gene050986 | MS.gene38046 | 0.923551 | 2.29E-89 | -1.69E-46 |
| MS.gene05100 | MS.gene38046 | 0.820189 | 7.82E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene38046 | -0.809688 | 1.67E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene38046 | 0.837201 | 5.98E-57 | -1.69E-46 |
| MS.gene051317 | MS.gene38046 | 0.827886 | 1.22E-54 | -1.69E-46 |
| MS.gene051366 | MS.gene38046 | -0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene051509 | MS.gene38046 | 0.829796 | 4.21E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene38046 | 0.871665 | 5.75E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene38046 | 0.880015 | 7.77E-70 | -1.69E-46 |
| MS.gene051949 | MS.gene38046 | 0.83484 | 2.38E-56 | -1.69E-46 |
| MS.gene052004 | MS.gene38046 | 0.8189 | 1.54E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene38046 | 0.829061 | 6.35E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene38046 | 0.813785 | 2.15E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene38046 | 0.836228 | 1.06E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene38046 | 0.838511 | 2.75E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene38046 | 0.821294 | 4.36E-53 | -1.69E-46 |
| MS.gene052916 | MS.gene38046 | 0.845565 | 3.75E-59 | -1.69E-46 |
| MS.gene052966 | MS.gene38046 | 0.833262 | 5.90E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene38046 | 0.818082 | 2.36E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene38046 | 0.849615 | 2.89E-60 | -1.69E-46 |
| MS.gene053286 | MS.gene38046 | 0.857016 | 2.17E-62 | -1.69E-46 |
| MS.gene053420 | MS.gene38046 | -0.81027 | 1.25E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene38046 | -0.813063 | 3.09E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene38046 | 0.822296 | 2.56E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene38046 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene38046 | 0.821672 | 3.56E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene38046 | 0.812706 | 3.70E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene38046 | -0.811561 | 6.58E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene38046 | 0.814473 | 1.51E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene38046 | 0.839039 | 2.01E-57 | -1.69E-46 |
| MS.gene054616 | MS.gene38046 | -0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene38046 | 0.879937 | 8.29E-70 | -1.69E-46 |
| MS.gene05470 | MS.gene38046 | 0.827731 | 1.33E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene38046 | 0.928105 | 4.62E-92 | -1.69E-46 |
| MS.gene055154 | MS.gene38046 | -0.802706 | 4.94E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene38046 | 0.908862 | 1.07E-81 | -1.69E-46 |
| MS.gene055502 | MS.gene38046 | 0.855003 | 8.44E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene38046 | 0.835278 | 1.84E-56 | -1.69E-46 |
| MS.gene055634 | MS.gene38046 | 0.866574 | 2.58E-65 | -1.69E-46 |
| MS.gene055638 | MS.gene38046 | 0.822002 | 2.99E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene38046 | 0.833908 | 4.07E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene38046 | 0.837193 | 6.01E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene38046 | 0.847703 | 9.78E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene38046 | 0.863856 | 1.85E-64 | -1.69E-46 |
| MS.gene055776 | MS.gene38046 | 0.957842 | 1.02E-115 | -1.69E-46 |
| MS.gene055849 | MS.gene38046 | 0.874212 | 8.06E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene38046 | 0.85086 | 1.29E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene38046 | -0.843807 | 1.12E-58 | -1.69E-46 |
| MS.gene056046 | MS.gene38046 | 0.844654 | 6.61E-59 | -1.69E-46 |
| MS.gene056185 | MS.gene38046 | -0.814458 | 1.53E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene38046 | 0.834393 | 3.08E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene38046 | 0.9124 | 2.03E-83 | -1.69E-46 |
| MS.gene056510 | MS.gene38046 | 0.902458 | 9.50E-79 | -1.69E-46 |
| MS.gene056657 | MS.gene38046 | 0.906315 | 1.69E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene38046 | 0.800483 | 1.41E-48 | -1.69E-46 |
| MS.gene056761 | MS.gene38046 | -0.827569 | 1.46E-54 | -1.69E-46 |
| MS.gene056878 | MS.gene38046 | 0.813164 | 2.94E-51 | -1.69E-46 |
| MS.gene056910 | MS.gene38046 | 0.816481 | 5.41E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene38046 | -0.814117 | 1.81E-51 | -1.69E-46 |
| MS.gene057148 | MS.gene38046 | 0.815032 | 1.14E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene38046 | 0.82747 | 1.54E-54 | -1.69E-46 |
| MS.gene057765 | MS.gene38046 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene38046 | 0.840247 | 9.75E-58 | -1.69E-46 |
| MS.gene057986 | MS.gene38046 | 0.805017 | 1.64E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene38046 | -0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene38046 | 0.810756 | 9.84E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene38046 | 0.881596 | 2.10E-70 | -1.69E-46 |
| MS.gene058544 | MS.gene38046 | 0.801289 | 9.66E-49 | -1.69E-46 |
| MS.gene058719 | MS.gene38046 | 0.840346 | 9.19E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene38046 | 0.839938 | 1.17E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene38046 | 0.877634 | 5.37E-69 | -1.69E-46 |
| MS.gene058774 | MS.gene38046 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene05884 | MS.gene38046 | -0.810002 | 1.43E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene38046 | 0.928548 | 2.47E-92 | -1.69E-46 |
| MS.gene059023 | MS.gene38046 | 0.812753 | 3.62E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene38046 | 0.80141 | 9.12E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene38046 | 0.844998 | 5.34E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene38046 | 0.813545 | 2.43E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene38046 | 0.897143 | 1.87E-76 | -1.69E-46 |
| MS.gene059701 | MS.gene38046 | -0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene38046 | 0.854651 | 1.07E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene38046 | 0.85771 | 1.36E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene38046 | 0.925284 | 2.26E-90 | -1.69E-46 |
| MS.gene06000 | MS.gene38046 | 0.812866 | 3.42E-51 | -1.69E-46 |
| MS.gene06012 | MS.gene38046 | -0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene38046 | -0.834344 | 3.17E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene38046 | 0.825509 | 4.51E-54 | -1.69E-46 |
| MS.gene060526 | MS.gene38046 | 0.806817 | 6.84E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene38046 | -0.81808 | 2.36E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene38046 | 0.908062 | 2.58E-81 | -1.69E-46 |
| MS.gene060762 | MS.gene38046 | 0.862403 | 5.19E-64 | -1.69E-46 |
| MS.gene060778 | MS.gene38046 | 0.86959 | 2.76E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene38046 | 0.873097 | 1.91E-67 | -1.69E-46 |
| MS.gene060982 | MS.gene38046 | 0.882092 | 1.39E-70 | -1.69E-46 |
| MS.gene061134 | MS.gene38046 | 0.802145 | 6.45E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene38046 | 0.802871 | 4.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023132 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene031016 | PPI |
| MS.gene81230 | MS.gene38046 | PPI |
| MS.gene031028 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene023132 | PPI |
| MS.gene38046 | MS.gene031355 | PPI |
| MS.gene38046 | MS.gene020883 | PPI |
| MS.gene38046 | MS.gene031028 | PPI |
| MS.gene38046 | MS.gene20445 | PPI |
| MS.gene20446 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene20443 | PPI |
| MS.gene20444 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene028321 | PPI |
| MS.gene38046 | MS.gene20444 | PPI |
| MS.gene38046 | MS.gene81230 | PPI |
| MS.gene36470 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene031030 | PPI |
| MS.gene38046 | MS.gene35137 | PPI |
| MS.gene38046 | MS.gene38214 | PPI |
| MS.gene031016 | MS.gene38046 | PPI |
| MS.gene38214 | MS.gene38046 | PPI |
| MS.gene38046 | MS.gene88379 | PPI |
| MS.gene99767 | MS.gene38046 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38046.t1 | MTR_5g097280 | 99.623 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 0.0 | 540 |
| MS.gene38046.t1 | MTR_4g094605 | 82.500 | 240 | 38 | 1 | 30 | 265 | 27 | 266 | 6.49e-149 | 417 |
| MS.gene38046.t1 | MTR_6g012080 | 75.373 | 268 | 60 | 3 | 1 | 265 | 1 | 265 | 1.05e-147 | 414 |
| MS.gene38046.t1 | MTR_6g011870 | 82.500 | 240 | 39 | 2 | 29 | 265 | 26 | 265 | 4.16e-147 | 412 |
| MS.gene38046.t1 | MTR_6g011880 | 82.083 | 240 | 40 | 2 | 29 | 265 | 26 | 265 | 6.82e-147 | 412 |
| MS.gene38046.t1 | MTR_6g011890 | 83.404 | 235 | 36 | 2 | 34 | 265 | 31 | 265 | 1.21e-146 | 411 |
| MS.gene38046.t1 | MTR_6g012110 | 75.281 | 267 | 58 | 3 | 2 | 265 | 4 | 265 | 6.43e-145 | 407 |
| MS.gene38046.t1 | MTR_2g081090 | 70.076 | 264 | 66 | 6 | 5 | 265 | 11 | 264 | 3.23e-124 | 354 |
| MS.gene38046.t1 | MTR_2g081090 | 78.027 | 223 | 45 | 4 | 46 | 265 | 16 | 237 | 1.18e-121 | 347 |
| MS.gene38046.t1 | MTR_6g043600 | 71.489 | 235 | 47 | 1 | 31 | 265 | 15 | 229 | 4.14e-119 | 340 |
| MS.gene38046.t1 | MTR_6g060175 | 54.067 | 209 | 87 | 4 | 49 | 253 | 71 | 274 | 3.56e-62 | 197 |
| MS.gene38046.t1 | MTR_1g026550 | 45.817 | 251 | 118 | 7 | 17 | 253 | 76 | 322 | 6.63e-62 | 198 |
| MS.gene38046.t1 | MTR_6g060175 | 52.153 | 209 | 81 | 5 | 49 | 253 | 71 | 264 | 7.32e-56 | 181 |
| MS.gene38046.t1 | MTR_5g098785 | 42.857 | 217 | 89 | 10 | 62 | 253 | 63 | 269 | 5.17e-37 | 132 |
| MS.gene38046.t1 | MTR_5g098780 | 41.935 | 217 | 91 | 9 | 62 | 253 | 61 | 267 | 2.32e-36 | 130 |
| MS.gene38046.t1 | MTR_3g101670 | 41.146 | 192 | 99 | 4 | 66 | 249 | 68 | 253 | 6.64e-36 | 129 |
| MS.gene38046.t1 | MTR_8g023790 | 37.069 | 232 | 107 | 9 | 34 | 249 | 48 | 256 | 8.50e-36 | 129 |
| MS.gene38046.t1 | MTR_6g033320 | 39.655 | 232 | 102 | 9 | 27 | 253 | 35 | 233 | 2.12e-35 | 127 |
| MS.gene38046.t1 | MTR_2g042720 | 36.444 | 225 | 109 | 9 | 52 | 260 | 60 | 266 | 1.30e-31 | 117 |
| MS.gene38046.t1 | MTR_1g026550 | 39.490 | 157 | 90 | 4 | 16 | 168 | 75 | 230 | 2.34e-29 | 111 |
| MS.gene38046.t1 | MTR_3g435460 | 34.826 | 201 | 97 | 6 | 66 | 252 | 63 | 243 | 1.07e-27 | 107 |
| MS.gene38046.t1 | MTR_4g015570 | 42.593 | 162 | 72 | 7 | 93 | 250 | 134 | 278 | 1.74e-25 | 102 |
| MS.gene38046.t1 | MTR_3g435460 | 33.505 | 194 | 95 | 6 | 73 | 252 | 9 | 182 | 2.42e-24 | 97.1 |
| MS.gene38046.t1 | MTR_3g070340 | 44.371 | 151 | 63 | 8 | 93 | 239 | 137 | 270 | 8.99e-21 | 89.4 |
| MS.gene38046.t1 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 4.10e-20 | 82.8 |
| MS.gene38046.t1 | MTR_2g008610 | 32.850 | 207 | 89 | 7 | 66 | 242 | 73 | 259 | 1.57e-17 | 80.1 |
| MS.gene38046.t1 | MTR_2g436960 | 48.438 | 64 | 29 | 1 | 189 | 252 | 33 | 92 | 2.62e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38046.t1 | AT2G05100 | 86.792 | 265 | 35 | 0 | 1 | 265 | 1 | 265 | 2.73e-176 | 486 |
| MS.gene38046.t1 | AT2G05070 | 86.038 | 265 | 37 | 0 | 1 | 265 | 1 | 265 | 2.32e-175 | 484 |
| MS.gene38046.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 33 | 298 | 1.22e-173 | 481 |
| MS.gene38046.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 1 | 266 | 2.25e-173 | 479 |
| MS.gene38046.t1 | AT2G05100 | 86.920 | 237 | 31 | 0 | 1 | 237 | 1 | 237 | 7.15e-153 | 429 |
| MS.gene38046.t1 | AT2G34420 | 75.746 | 268 | 55 | 3 | 2 | 265 | 4 | 265 | 5.00e-144 | 404 |
| MS.gene38046.t1 | AT1G29920 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene38046.t1 | AT1G29910 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene38046.t1 | AT1G29930 | 75.836 | 269 | 55 | 4 | 2 | 265 | 4 | 267 | 9.71e-144 | 404 |
| MS.gene38046.t1 | AT2G34430 | 76.119 | 268 | 55 | 5 | 2 | 265 | 4 | 266 | 7.27e-143 | 402 |
| MS.gene38046.t1 | AT5G54270 | 67.293 | 266 | 75 | 6 | 2 | 264 | 8 | 264 | 2.94e-121 | 347 |
| MS.gene38046.t1 | AT1G76570 | 44.776 | 268 | 129 | 7 | 2 | 256 | 62 | 323 | 2.68e-62 | 199 |
| MS.gene38046.t1 | AT4G10340 | 52.632 | 209 | 90 | 5 | 49 | 253 | 62 | 265 | 1.76e-57 | 185 |
| MS.gene38046.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene38046.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene38046.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene38046.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene38046.t1 | AT3G54890 | 43.367 | 196 | 91 | 6 | 63 | 253 | 52 | 232 | 9.97e-37 | 130 |
| MS.gene38046.t1 | AT3G61470 | 39.024 | 205 | 109 | 6 | 52 | 249 | 50 | 245 | 3.88e-36 | 129 |
| MS.gene38046.t1 | AT1G61520 | 42.308 | 208 | 85 | 10 | 72 | 254 | 14 | 211 | 1.81e-33 | 121 |
| MS.gene38046.t1 | AT1G19150 | 34.222 | 225 | 114 | 7 | 52 | 260 | 63 | 269 | 1.53e-29 | 112 |
| MS.gene38046.t1 | AT3G47470 | 38.342 | 193 | 101 | 6 | 66 | 252 | 64 | 244 | 2.27e-28 | 108 |
| MS.gene38046.t1 | AT3G08940 | 34.201 | 269 | 107 | 12 | 33 | 250 | 27 | 276 | 3.18e-26 | 104 |
| MS.gene38046.t1 | AT3G54890 | 41.875 | 160 | 74 | 5 | 63 | 218 | 52 | 196 | 3.80e-25 | 99.8 |
| MS.gene38046.t1 | AT5G01530 | 41.212 | 165 | 76 | 7 | 93 | 253 | 135 | 282 | 4.79e-25 | 101 |
| MS.gene38046.t1 | AT2G40100 | 43.137 | 153 | 67 | 7 | 93 | 242 | 136 | 271 | 7.08e-23 | 95.1 |
| MS.gene38046.t1 | AT3G54890 | 35.233 | 193 | 77 | 5 | 63 | 253 | 52 | 198 | 2.01e-22 | 92.4 |
| MS.gene38046.t1 | AT1G15820 | 30.916 | 262 | 123 | 9 | 15 | 242 | 19 | 256 | 5.35e-18 | 81.3 |
| MS.gene38046.t1 | AT5G28450 | 52.941 | 68 | 30 | 2 | 184 | 249 | 94 | 161 | 4.89e-14 | 68.9 |
| MS.gene38046.t1 | AT3G54890 | 43.182 | 88 | 42 | 2 | 63 | 149 | 52 | 132 | 2.18e-11 | 61.2 |
Find 108 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTCCTTGCAAAGGTTTC+AGG | 0.062967 | 5.1:-77638322 | None:intergenic |
| AGAGGGTGGCCTTGACTATT+TGG | 0.205421 | 5.1:+77638477 | MS.gene38046:CDS |
| CGGTGAGGCTGTGTGGTTTA+AGG | 0.263630 | 5.1:+77638435 | MS.gene38046:CDS |
| TTTGTTCAAGCCATTGTTAC+TGG | 0.264682 | 5.1:+77638742 | MS.gene38046:CDS |
| CTCAGAGCATTCTTGCAATC+TGG | 0.295339 | 5.1:+77638521 | MS.gene38046:CDS |
| CTCTGAGCATGGATCAGGTT+TGG | 0.324151 | 5.1:-77638505 | None:intergenic |
| GTCTTGGCGTTCTCATTGTC+CGG | 0.330962 | 5.1:-77638848 | None:intergenic |
| GAGGGTGGCCTTGACTATTT+GGG | 0.336583 | 5.1:+77638478 | MS.gene38046:CDS |
| TTGGCTATGTTCTCCATGTT+TGG | 0.341425 | 5.1:+77638715 | MS.gene38046:CDS |
| TTCAACTCTGCGAATGCATC+AGG | 0.344835 | 5.1:-77638667 | None:intergenic |
| GGCCACCCTCTGAGAAGATC+TGG | 0.347970 | 5.1:-77638465 | None:intergenic |
| CCCTGACCGTCCCAAGTACT+TGG | 0.361481 | 5.1:+77638213 | MS.gene38046:CDS |
| GGTGAGTTTCCTGGTGACTA+TGG | 0.365981 | 5.1:+77638271 | MS.gene38046:CDS |
| TGCCAGTGAATGCTGATTGT+TGG | 0.367235 | 5.1:-77637756 | None:intergenic |
| CCGTTCTTCTCAAGGATCTC+AGG | 0.374661 | 5.1:-77638403 | None:intergenic |
| TACTTGACTGGTGAGTTTCC+TGG | 0.393901 | 5.1:+77638262 | MS.gene38046:CDS |
| GCCCATGCGTTGTTGGCGAC+AGG | 0.394359 | 5.1:-77638805 | None:intergenic |
| GGCTACACAGGTTGTGCTCA+TGG | 0.400913 | 5.1:+77638543 | MS.gene38046:CDS |
| CCCAAGTACTTGGGACGGTC+AGG | 0.404268 | 5.1:-77638214 | None:intergenic |
| TCTGAGCATGGATCAGGTTT+GGG | 0.410646 | 5.1:-77638504 | None:intergenic |
| GAGAAGAACGGTGTTAAATT+CGG | 0.410939 | 5.1:+77638415 | MS.gene38046:CDS |
| TCTTGGCGTTCTCATTGTCC+GGG | 0.416065 | 5.1:-77638847 | None:intergenic |
| TGGTCGTAAAGGTTCTGAAC+AGG | 0.417502 | 5.1:-77638772 | None:intergenic |
| TGGGCTATGCTTGGTGCATT+GGG | 0.418579 | 5.1:+77638370 | MS.gene38046:CDS |
| GGTGGTGCCTTTGACCCTCT+TGG | 0.419230 | 5.1:+77638631 | MS.gene38046:CDS |
| AGCATATGCCCATGCGTTGT+TGG | 0.419884 | 5.1:-77638812 | None:intergenic |
| GTGCTCATGGGATTTGTTGA+AGG | 0.427865 | 5.1:+77638556 | MS.gene38046:CDS |
| ATGGGCTATGCTTGGTGCAT+TGG | 0.428620 | 5.1:+77638369 | MS.gene38046:CDS |
| AACAAGGAAATGAGTTCATC+AGG | 0.436049 | 5.1:+77637791 | MS.gene38046:CDS |
| AGAGTGCTCCTGAGAGCATT+TGG | 0.436155 | 5.1:+77637863 | MS.gene38046:CDS |
| ATCAGGAAAGCTGGTAACTT+TGG | 0.441484 | 5.1:+77637808 | MS.gene38046:CDS |
| TGATGCATTCGCAGAGTTGA+AGG | 0.448661 | 5.1:+77638669 | MS.gene38046:CDS |
| AGAGAATGGACCCAAGTACT+TGG | 0.454278 | 5.1:-77638224 | None:intergenic |
| GAATGCTCTGAGCATGGATC+AGG | 0.464537 | 5.1:-77638510 | None:intergenic |
| TCAGCATTCACTGGCAAGAC+TGG | 0.471182 | 5.1:+77637763 | MS.gene38046:CDS |
| TCAGAGCATTCTTGCAATCT+GGG | 0.473136 | 5.1:+77638522 | MS.gene38046:CDS |
| ACCCTGTCGCCAACAACGCA+TGG | 0.473833 | 5.1:+77638803 | MS.gene38046:CDS |
| TTGAAGTAATTCACAGCAGA+TGG | 0.482906 | 5.1:+77638350 | MS.gene38046:CDS |
| GGTTCCTTGCAAAGGTTTCA+GGG | 0.488153 | 5.1:-77638321 | None:intergenic |
| AAGGCACCACCAGGGTATAG+TGG | 0.492859 | 5.1:-77638619 | None:intergenic |
| GTTGAAGGCTACAGAGTTGG+TGG | 0.494755 | 5.1:+77638571 | MS.gene38046:CDS |
| CACAGCAGATGGGCTATGCT+TGG | 0.495212 | 5.1:+77638361 | MS.gene38046:CDS |
| AACTCACCAGTCAAGTATGA+TGG | 0.498383 | 5.1:-77638256 | None:intergenic |
| AGTTTCCTGGTGACTATGGA+TGG | 0.502040 | 5.1:+77638275 | MS.gene38046:CDS |
| GATGGAATTTGCTCAGAGAA+TGG | 0.503528 | 5.1:-77638238 | None:intergenic |
| CAAGCCATTGTTACTGGCAA+GGG | 0.504441 | 5.1:+77638748 | MS.gene38046:CDS |
| AAGCTCACGGTTCCTTGCAA+AGG | 0.505875 | 5.1:-77638329 | None:intergenic |
| AATGAGTTCATCAGGAAAGC+TGG | 0.507285 | 5.1:+77637799 | MS.gene38046:CDS |
| ATTTAACACCGTTCTTCTCA+AGG | 0.517683 | 5.1:-77638411 | None:intergenic |
| GCTACACAGGTTGTGCTCAT+GGG | 0.523866 | 5.1:+77638544 | MS.gene38046:CDS |
| GACTATGGATGGGACACAGC+TGG | 0.528763 | 5.1:+77638286 | MS.gene38046:CDS |
| GGTCAGCAACATGGTCGTAA+AGG | 0.529520 | 5.1:-77638783 | None:intergenic |
| CCCATGCGTTGTTGGCGACA+GGG | 0.536409 | 5.1:-77638804 | None:intergenic |
| ACTACTTACCAAATGCTCTC+AGG | 0.536679 | 5.1:-77637871 | None:intergenic |
| CCCTGTCGCCAACAACGCAT+GGG | 0.536908 | 5.1:+77638804 | MS.gene38046:CDS |
| AGCAAGACCAAGAGGGTCAA+AGG | 0.536924 | 5.1:-77638638 | None:intergenic |
| TCAAGCCATTGTTACTGGCA+AGG | 0.539300 | 5.1:+77638747 | MS.gene38046:CDS |
| CAAATTCCATCATACTTGAC+TGG | 0.540774 | 5.1:+77638250 | MS.gene38046:CDS |
| CGTTCTTCTCAAGGATCTCA+GGG | 0.541586 | 5.1:-77638402 | None:intergenic |
| AGAGGGTCAAAGGCACCACC+AGG | 0.542069 | 5.1:-77638628 | None:intergenic |
| GCCCAGATCTTCTCAGAGGG+TGG | 0.543898 | 5.1:+77638463 | MS.gene38046:CDS |
| TTTGTTGAAGGCTACAGAGT+TGG | 0.545933 | 5.1:+77638568 | MS.gene38046:CDS |
| TCTTGCAATCTGGGCTACAC+AGG | 0.546344 | 5.1:+77638531 | MS.gene38046:CDS |
| CCTGACCGTCCCAAGTACTT+GGG | 0.552290 | 5.1:+77638214 | MS.gene38046:CDS |
| ATCCAACAATCAGCATTCAC+TGG | 0.556574 | 5.1:+77637754 | MS.gene38046:CDS |
| AGAGTTGGTGGAGGACCACT+TGG | 0.559575 | 5.1:+77638583 | MS.gene38046:CDS |
| GGAACTCAAGAACGGCCGAT+TGG | 0.563130 | 5.1:+77638696 | MS.gene38046:CDS |
| GAGGCTGTGTGGTTTAAGGC+TGG | 0.563162 | 5.1:+77638439 | MS.gene38046:CDS |
| GGTGCCCAGATCTTCTCAGA+GGG | 0.564509 | 5.1:+77638460 | MS.gene38046:CDS |
| TTGCAAGAATGCTCTGAGCA+TGG | 0.570179 | 5.1:-77638516 | None:intergenic |
| GCCACCCTCTGAGAAGATCT+GGG | 0.573456 | 5.1:-77638464 | None:intergenic |
| GGCAAGACTGGTTTGAAACA+AGG | 0.575215 | 5.1:+77637775 | MS.gene38046:CDS |
| ACATGGAGAACATAGCCAAT+CGG | 0.576833 | 5.1:-77638711 | None:intergenic |
| AGGCACCACCAGGGTATAGT+GGG | 0.590141 | 5.1:-77638618 | None:intergenic |
| CCTGAGATCCTTGAGAAGAA+CGG | 0.593147 | 5.1:+77638403 | MS.gene38046:CDS |
| TGATTGTTGGATTGCAGAGG+TGG | 0.593510 | 5.1:-77637743 | None:intergenic |
| TGGCGACAGGGTCAGCAACA+TGG | 0.597357 | 5.1:-77638792 | None:intergenic |
| AGGGCCCTTGCCAGTAACAA+TGG | 0.597695 | 5.1:-77638752 | None:intergenic |
| CCAAGTACTTGGGACGGTCA+GGG | 0.599166 | 5.1:-77638213 | None:intergenic |
| GAGAATGGACCCAAGTACTT+GGG | 0.599574 | 5.1:-77638223 | None:intergenic |
| TTGGGTTGCCCAAATAGTCA+AGG | 0.608462 | 5.1:-77638486 | None:intergenic |
| TGAAGTAATTCACAGCAGAT+GGG | 0.611387 | 5.1:+77638351 | MS.gene38046:CDS |
| GTGTCCCATCCATAGTCACC+AGG | 0.613151 | 5.1:-77638280 | None:intergenic |
| TGGTGCCCAGATCTTCTCAG+AGG | 0.616548 | 5.1:+77638459 | MS.gene38046:CDS |
| TATGCTACTAACTTCGTCCC+CGG | 0.620877 | 5.1:+77638829 | MS.gene38046:CDS |
| CTGACCCTGAAACCTTTGCA+AGG | 0.624240 | 5.1:+77638317 | MS.gene38046:CDS |
| GGTGGAGGACCACTTGGTGA+AGG | 0.624859 | 5.1:+77638589 | MS.gene38046:CDS |
| GGGTCTAGTCCTTCACCAAG+TGG | 0.625944 | 5.1:-77638598 | None:intergenic |
| TCAACTCTGCGAATGCATCA+GGG | 0.627212 | 5.1:-77638666 | None:intergenic |
| GGGTCATCAGCAAGACCAAG+AGG | 0.629020 | 5.1:-77638646 | None:intergenic |
| GGTCGTAAAGGTTCTGAACA+GGG | 0.631913 | 5.1:-77638771 | None:intergenic |
| ACTCTTCACAGTACGACGCA+TGG | 0.636134 | 5.1:-77637845 | None:intergenic |
| CTTCTCAAGGATCTCAGGGA+AGG | 0.637864 | 5.1:-77638398 | None:intergenic |
| TGCTGATTGTTGGATTGCAG+AGG | 0.642666 | 5.1:-77637746 | None:intergenic |
| ATTCGCAGAGTTGAAGGTCA+AGG | 0.644022 | 5.1:+77638675 | MS.gene38046:CDS |
| AAGGTCAAGGAACTCAAGAA+CGG | 0.645041 | 5.1:+77638688 | MS.gene38046:CDS |
| TGTGAATTACTTCAAGCTCA+CGG | 0.646318 | 5.1:-77638342 | None:intergenic |
| GAAGGCTACAGAGTTGGTGG+AGG | 0.651701 | 5.1:+77638574 | MS.gene38046:CDS |
| CTTGGCGTTCTCATTGTCCG+GGG | 0.655135 | 5.1:-77638846 | None:intergenic |
| TTAAATTCGGTGAGGCTGTG+TGG | 0.662485 | 5.1:+77638428 | MS.gene38046:CDS |
| ATGGACCCAAGTACTTGGGA+CGG | 0.662771 | 5.1:-77638219 | None:intergenic |
| GGACTAGACCCACTATACCC+TGG | 0.675418 | 5.1:+77638610 | MS.gene38046:CDS |
| GGTCATCAGCAAGACCAAGA+GGG | 0.676366 | 5.1:-77638645 | None:intergenic |
| GTTTCCTGGTGACTATGGAT+GGG | 0.694385 | 5.1:+77638276 | MS.gene38046:CDS |
| GAACGGTGTTAAATTCGGTG+AGG | 0.717704 | 5.1:+77638420 | MS.gene38046:CDS |
| GAGGGTCAAAGGCACCACCA+GGG | 0.717882 | 5.1:-77638627 | None:intergenic |
| TTGAACAAAGAAACCAAACA+TGG | 0.730913 | 5.1:-77638728 | None:intergenic |
| CTAGACCCACTATACCCTGG+TGG | 0.775578 | 5.1:+77638613 | MS.gene38046:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAATGTTAATAACTAAC+TGG | + | chr5.1:77638047-77638066 | MS.gene38046:intron | 20.0% |
| !!! | TTGTTTTCATATATTTGACT+TGG | + | chr5.1:77638162-77638181 | MS.gene38046:intron | 20.0% |
| !! | ATGTGCTAATATTTGAAGTA+AGG | + | chr5.1:77638129-77638148 | MS.gene38046:intron | 25.0% |
| TTGAACAAAGAAACCAAACA+TGG | - | chr5.1:77638731-77638750 | None:intergenic | 30.0% | |
| !!! | ACCTGCATAATTTTAGCTTT+TGG | - | chr5.1:77638010-77638029 | None:intergenic | 30.0% |
| !!! | CCTGCATAATTTTAGCTTTT+GGG | - | chr5.1:77638009-77638028 | None:intergenic | 30.0% |
| !!! | TATGATCTGTTTTGAAAACC+AGG | + | chr5.1:77638185-77638204 | MS.gene38046:intron | 30.0% |
| AACAAGGAAATGAGTTCATC+AGG | + | chr5.1:77637791-77637810 | MS.gene38046:CDS | 35.0% | |
| ATTTAACACCGTTCTTCTCA+AGG | - | chr5.1:77638414-77638433 | None:intergenic | 35.0% | |
| CAAATTCCATCATACTTGAC+TGG | + | chr5.1:77638250-77638269 | MS.gene38046:CDS | 35.0% | |
| CAAGAGTCATGATGAGATAA+AGG | - | chr5.1:77637950-77637969 | None:intergenic | 35.0% | |
| CCCAAAAGCTAAAATTATGC+AGG | + | chr5.1:77638006-77638025 | MS.gene38046:intron | 35.0% | |
| TGAAGTAATTCACAGCAGAT+GGG | + | chr5.1:77638351-77638370 | MS.gene38046:CDS | 35.0% | |
| TGTGAATTACTTCAAGCTCA+CGG | - | chr5.1:77638345-77638364 | None:intergenic | 35.0% | |
| TTGAAGTAATTCACAGCAGA+TGG | + | chr5.1:77638350-77638369 | MS.gene38046:CDS | 35.0% | |
| TTTGTTCAAGCCATTGTTAC+TGG | + | chr5.1:77638742-77638761 | MS.gene38046:CDS | 35.0% | |
| ! | GAGAAGAACGGTGTTAAATT+CGG | + | chr5.1:77638415-77638434 | MS.gene38046:CDS | 35.0% |
| !!! | TCTGTTTTGAAAACCAGGTA+TGG | + | chr5.1:77638190-77638209 | MS.gene38046:intron | 35.0% |
| AACTCACCAGTCAAGTATGA+TGG | - | chr5.1:77638259-77638278 | None:intergenic | 40.0% | |
| AAGGTCAAGGAACTCAAGAA+CGG | + | chr5.1:77638688-77638707 | MS.gene38046:CDS | 40.0% | |
| AATGAGTTCATCAGGAAAGC+TGG | + | chr5.1:77637799-77637818 | MS.gene38046:CDS | 40.0% | |
| ACATGGAGAACATAGCCAAT+CGG | - | chr5.1:77638714-77638733 | None:intergenic | 40.0% | |
| ACTACTTACCAAATGCTCTC+AGG | - | chr5.1:77637874-77637893 | None:intergenic | 40.0% | |
| ATCAGGAAAGCTGGTAACTT+TGG | + | chr5.1:77637808-77637827 | MS.gene38046:CDS | 40.0% | |
| ATCCAACAATCAGCATTCAC+TGG | + | chr5.1:77637754-77637773 | MS.gene38046:CDS | 40.0% | |
| TTGGCTATGTTCTCCATGTT+TGG | + | chr5.1:77638715-77638734 | MS.gene38046:CDS | 40.0% | |
| TTTGTTGAAGGCTACAGAGT+TGG | + | chr5.1:77638568-77638587 | MS.gene38046:CDS | 40.0% | |
| ! | GATGGAATTTGCTCAGAGAA+TGG | - | chr5.1:77638241-77638260 | None:intergenic | 40.0% |
| ! | TCAGAGCATTCTTGCAATCT+GGG | + | chr5.1:77638522-77638541 | MS.gene38046:CDS | 40.0% |
| AGAGAATGGACCCAAGTACT+TGG | - | chr5.1:77638227-77638246 | None:intergenic | 45.0% | |
| AGTTTCCTGGTGACTATGGA+TGG | + | chr5.1:77638275-77638294 | MS.gene38046:CDS | 45.0% | |
| ATTCGCAGAGTTGAAGGTCA+AGG | + | chr5.1:77638675-77638694 | MS.gene38046:CDS | 45.0% | |
| CAAGCCATTGTTACTGGCAA+GGG | + | chr5.1:77638748-77638767 | MS.gene38046:CDS | 45.0% | |
| CCTGAGATCCTTGAGAAGAA+CGG | + | chr5.1:77638403-77638422 | MS.gene38046:CDS | 45.0% | |
| CGTTCTTCTCAAGGATCTCA+GGG | - | chr5.1:77638405-77638424 | None:intergenic | 45.0% | |
| GAGAATGGACCCAAGTACTT+GGG | - | chr5.1:77638226-77638245 | None:intergenic | 45.0% | |
| GGTTCCTTGCAAAGGTTTCA+GGG | - | chr5.1:77638324-77638343 | None:intergenic | 45.0% | |
| GTTTCCTGGTGACTATGGAT+GGG | + | chr5.1:77638276-77638295 | MS.gene38046:CDS | 45.0% | |
| TACTTGACTGGTGAGTTTCC+TGG | + | chr5.1:77638262-77638281 | MS.gene38046:CDS | 45.0% | |
| TATGCTACTAACTTCGTCCC+CGG | + | chr5.1:77638829-77638848 | MS.gene38046:CDS | 45.0% | |
| TCAACTCTGCGAATGCATCA+GGG | - | chr5.1:77638669-77638688 | None:intergenic | 45.0% | |
| TCAAGCCATTGTTACTGGCA+AGG | + | chr5.1:77638747-77638766 | MS.gene38046:CDS | 45.0% | |
| TCTGAGCATGGATCAGGTTT+GGG | - | chr5.1:77638507-77638526 | None:intergenic | 45.0% | |
| TGATGCATTCGCAGAGTTGA+AGG | + | chr5.1:77638669-77638688 | MS.gene38046:CDS | 45.0% | |
| TGATTGTTGGATTGCAGAGG+TGG | - | chr5.1:77637746-77637765 | None:intergenic | 45.0% | |
| TTCAACTCTGCGAATGCATC+AGG | - | chr5.1:77638670-77638689 | None:intergenic | 45.0% | |
| ! | CTCAGAGCATTCTTGCAATC+TGG | + | chr5.1:77638521-77638540 | MS.gene38046:CDS | 45.0% |
| ! | GAACGGTGTTAAATTCGGTG+AGG | + | chr5.1:77638420-77638439 | MS.gene38046:CDS | 45.0% |
| ! | TGCCAGTGAATGCTGATTGT+TGG | - | chr5.1:77637759-77637778 | None:intergenic | 45.0% |
| ! | TGCTGATTGTTGGATTGCAG+AGG | - | chr5.1:77637749-77637768 | None:intergenic | 45.0% |
| ! | TTAAATTCGGTGAGGCTGTG+TGG | + | chr5.1:77638428-77638447 | MS.gene38046:CDS | 45.0% |
| ! | TTGCAAGAATGCTCTGAGCA+TGG | - | chr5.1:77638519-77638538 | None:intergenic | 45.0% |
| ! | TTGGGTTGCCCAAATAGTCA+AGG | - | chr5.1:77638489-77638508 | None:intergenic | 45.0% |
| !! | GGCAAGACTGGTTTGAAACA+AGG | + | chr5.1:77637775-77637794 | MS.gene38046:CDS | 45.0% |
| !! | GGTCGTAAAGGTTCTGAACA+GGG | - | chr5.1:77638774-77638793 | None:intergenic | 45.0% |
| !! | GTGCTCATGGGATTTGTTGA+AGG | + | chr5.1:77638556-77638575 | MS.gene38046:CDS | 45.0% |
| !! | TGGTCGTAAAGGTTCTGAAC+AGG | - | chr5.1:77638775-77638794 | None:intergenic | 45.0% |
| AAGCTCACGGTTCCTTGCAA+AGG | - | chr5.1:77638332-77638351 | None:intergenic | 50.0% | |
| ACTCTTCACAGTACGACGCA+TGG | - | chr5.1:77637848-77637867 | None:intergenic | 50.0% | |
| AGCAAGACCAAGAGGGTCAA+AGG | - | chr5.1:77638641-77638660 | None:intergenic | 50.0% | |
| AGCATATGCCCATGCGTTGT+TGG | - | chr5.1:77638815-77638834 | None:intergenic | 50.0% | |
| ATGGACCCAAGTACTTGGGA+CGG | - | chr5.1:77638222-77638241 | None:intergenic | 50.0% | |
| CCGTTCTTCTCAAGGATCTC+AGG | - | chr5.1:77638406-77638425 | None:intergenic | 50.0% | |
| CGGTTCCTTGCAAAGGTTTC+AGG | - | chr5.1:77638325-77638344 | None:intergenic | 50.0% | |
| CTCTGAGCATGGATCAGGTT+TGG | - | chr5.1:77638508-77638527 | None:intergenic | 50.0% | |
| CTGACCCTGAAACCTTTGCA+AGG | + | chr5.1:77638317-77638336 | MS.gene38046:CDS | 50.0% | |
| CTTCTCAAGGATCTCAGGGA+AGG | - | chr5.1:77638401-77638420 | None:intergenic | 50.0% | |
| GCTACACAGGTTGTGCTCAT+GGG | + | chr5.1:77638544-77638563 | MS.gene38046:CDS | 50.0% | |
| GGTCAGCAACATGGTCGTAA+AGG | - | chr5.1:77638786-77638805 | None:intergenic | 50.0% | |
| GGTCATCAGCAAGACCAAGA+GGG | - | chr5.1:77638648-77638667 | None:intergenic | 50.0% | |
| GGTGAGTTTCCTGGTGACTA+TGG | + | chr5.1:77638271-77638290 | MS.gene38046:CDS | 50.0% | |
| GTTGAAGGCTACAGAGTTGG+TGG | + | chr5.1:77638571-77638590 | MS.gene38046:CDS | 50.0% | |
| TCAGCATTCACTGGCAAGAC+TGG | + | chr5.1:77637763-77637782 | MS.gene38046:CDS | 50.0% | |
| TCTTGCAATCTGGGCTACAC+AGG | + | chr5.1:77638531-77638550 | MS.gene38046:CDS | 50.0% | |
| ! | AGAGGGTGGCCTTGACTATT+TGG | + | chr5.1:77638477-77638496 | MS.gene38046:CDS | 50.0% |
| ! | GAATGCTCTGAGCATGGATC+AGG | - | chr5.1:77638513-77638532 | None:intergenic | 50.0% |
| ! | GAGGGTGGCCTTGACTATTT+GGG | + | chr5.1:77638478-77638497 | MS.gene38046:CDS | 50.0% |
| !! | AGAGTGCTCCTGAGAGCATT+TGG | + | chr5.1:77637863-77637882 | MS.gene38046:CDS | 50.0% |
| !! | ATGGGCTATGCTTGGTGCAT+TGG | + | chr5.1:77638369-77638388 | MS.gene38046:CDS | 50.0% |
| !! | TGGGCTATGCTTGGTGCATT+GGG | + | chr5.1:77638370-77638389 | MS.gene38046:CDS | 50.0% |
| AGGCACCACCAGGGTATAGT+GGG | - | chr5.1:77638621-77638640 | None:intergenic | 55.0% | |
| AGGGCCCTTGCCAGTAACAA+TGG | - | chr5.1:77638755-77638774 | None:intergenic | 55.0% | |
| CCAAGTACTTGGGACGGTCA+GGG | - | chr5.1:77638216-77638235 | None:intergenic | 55.0% | |
| CCTGACCGTCCCAAGTACTT+GGG | + | chr5.1:77638214-77638233 | MS.gene38046:CDS | 55.0% | |
| CGGTGAGGCTGTGTGGTTTA+AGG | + | chr5.1:77638435-77638454 | MS.gene38046:CDS | 55.0% | |
| CTAGACCCACTATACCCTGG+TGG | + | chr5.1:77638613-77638632 | MS.gene38046:CDS | 55.0% | |
| GACTATGGATGGGACACAGC+TGG | + | chr5.1:77638286-77638305 | MS.gene38046:CDS | 55.0% | |
| GGAACTCAAGAACGGCCGAT+TGG | + | chr5.1:77638696-77638715 | MS.gene38046:CDS | 55.0% | |
| GGACTAGACCCACTATACCC+TGG | + | chr5.1:77638610-77638629 | MS.gene38046:CDS | 55.0% | |
| GGCTACACAGGTTGTGCTCA+TGG | + | chr5.1:77638543-77638562 | MS.gene38046:CDS | 55.0% | |
| GGGTCATCAGCAAGACCAAG+AGG | - | chr5.1:77638649-77638668 | None:intergenic | 55.0% | |
| GGGTCTAGTCCTTCACCAAG+TGG | - | chr5.1:77638601-77638620 | None:intergenic | 55.0% | |
| GGTGCCCAGATCTTCTCAGA+GGG | + | chr5.1:77638460-77638479 | MS.gene38046:CDS | 55.0% | |
| GTGTCCCATCCATAGTCACC+AGG | - | chr5.1:77638283-77638302 | None:intergenic | 55.0% | |
| TGGTGCCCAGATCTTCTCAG+AGG | + | chr5.1:77638459-77638478 | MS.gene38046:CDS | 55.0% | |
| ! | AAGGCACCACCAGGGTATAG+TGG | - | chr5.1:77638622-77638641 | None:intergenic | 55.0% |
| ! | GAGGCTGTGTGGTTTAAGGC+TGG | + | chr5.1:77638439-77638458 | MS.gene38046:CDS | 55.0% |
| ! | GCCACCCTCTGAGAAGATCT+GGG | - | chr5.1:77638467-77638486 | None:intergenic | 55.0% |
| !! | AGAGTTGGTGGAGGACCACT+TGG | + | chr5.1:77638583-77638602 | MS.gene38046:CDS | 55.0% |
| !! | CACAGCAGATGGGCTATGCT+TGG | + | chr5.1:77638361-77638380 | MS.gene38046:CDS | 55.0% |
| !! | GAAGGCTACAGAGTTGGTGG+AGG | + | chr5.1:77638574-77638593 | MS.gene38046:CDS | 55.0% |
| ACCCTGTCGCCAACAACGCA+TGG | + | chr5.1:77638803-77638822 | MS.gene38046:CDS | 60.0% | |
| CCCAAGTACTTGGGACGGTC+AGG | - | chr5.1:77638217-77638236 | None:intergenic | 60.0% | |
| CCCATGCGTTGTTGGCGACA+GGG | - | chr5.1:77638807-77638826 | None:intergenic | 60.0% | |
| CCCTGACCGTCCCAAGTACT+TGG | + | chr5.1:77638213-77638232 | MS.gene38046:CDS | 60.0% | |
| CCCTGTCGCCAACAACGCAT+GGG | + | chr5.1:77638804-77638823 | MS.gene38046:CDS | 60.0% | |
| GCCCAGATCTTCTCAGAGGG+TGG | + | chr5.1:77638463-77638482 | MS.gene38046:CDS | 60.0% | |
| GGTGGTGCCTTTGACCCTCT+TGG | + | chr5.1:77638631-77638650 | MS.gene38046:CDS | 60.0% | |
| TGGCGACAGGGTCAGCAACA+TGG | - | chr5.1:77638795-77638814 | None:intergenic | 60.0% | |
| ! | GGCCACCCTCTGAGAAGATC+TGG | - | chr5.1:77638468-77638487 | None:intergenic | 60.0% |
| ! | GGTGGAGGACCACTTGGTGA+AGG | + | chr5.1:77638589-77638608 | MS.gene38046:CDS | 60.0% |
| !! | AGAGGGTCAAAGGCACCACC+AGG | - | chr5.1:77638631-77638650 | None:intergenic | 60.0% |
| !! | GAGGGTCAAAGGCACCACCA+GGG | - | chr5.1:77638630-77638649 | None:intergenic | 60.0% |
| GCCCATGCGTTGTTGGCGAC+AGG | - | chr5.1:77638808-77638827 | None:intergenic | 65.0% | |
| GGGACGGTCAGGGCCATACC+TGG | - | chr5.1:77638206-77638225 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 77637739 | 77638858 | 77637739 | ID=MS.gene38046 |
| chr5.1 | mRNA | 77637739 | 77638858 | 77637739 | ID=MS.gene38046.t1;Parent=MS.gene38046 |
| chr5.1 | exon | 77637739 | 77637884 | 77637739 | ID=MS.gene38046.t1.exon1;Parent=MS.gene38046.t1 |
| chr5.1 | CDS | 77637739 | 77637884 | 77637739 | ID=cds.MS.gene38046.t1;Parent=MS.gene38046.t1 |
| chr5.1 | exon | 77638207 | 77638858 | 77638207 | ID=MS.gene38046.t1.exon2;Parent=MS.gene38046.t1 |
| chr5.1 | CDS | 77638207 | 77638858 | 77638207 | ID=cds.MS.gene38046.t1;Parent=MS.gene38046.t1 |
| Gene Sequence |
| Protein sequence |
