Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63951.t1 | XP_013443601.1 | 95.6 | 435 | 5 | 3 | 55 | 477 | 1 | 433 | 2.30E-224 | 788.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63951.t1 | Q40863 | 66.8 | 352 | 97 | 6 | 119 | 452 | 69 | 418 | 1.5e-131 | 471.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63951.t1 | A0A072TKA0 | 95.6 | 435 | 5 | 3 | 55 | 477 | 1 | 433 | 1.6e-224 | 788.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene63951 | 0.826495 | 2.63E-54 | -1.69E-46 |
| MS.gene049173 | MS.gene63951 | 0.822413 | 2.40E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene63951 | 0.815728 | 7.97E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene63951 | 0.853618 | 2.12E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene63951 | 0.863651 | 2.14E-64 | -1.69E-46 |
| MS.gene049285 | MS.gene63951 | 0.8692 | 3.70E-66 | -1.69E-46 |
| MS.gene049320 | MS.gene63951 | 0.839442 | 1.58E-57 | -1.69E-46 |
| MS.gene049627 | MS.gene63951 | 0.85166 | 7.68E-61 | -1.69E-46 |
| MS.gene049633 | MS.gene63951 | 0.801678 | 8.04E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene63951 | 0.828016 | 1.14E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene63951 | 0.849197 | 3.77E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene63951 | 0.84878 | 4.93E-60 | -1.69E-46 |
| MS.gene050165 | MS.gene63951 | 0.865173 | 7.16E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene63951 | 0.825337 | 4.95E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene63951 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene63951 | 0.873096 | 1.92E-67 | -1.69E-46 |
| MS.gene050496 | MS.gene63951 | 0.821439 | 4.03E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene63951 | 0.867979 | 9.18E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene63951 | 0.862035 | 6.74E-64 | -1.69E-46 |
| MS.gene050577 | MS.gene63951 | 0.80467 | 1.93E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene63951 | 0.84536 | 4.26E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene63951 | 0.825558 | 4.39E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene63951 | 0.816161 | 6.38E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene63951 | 0.817614 | 3.01E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene63951 | 0.830459 | 2.90E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene63951 | 0.826929 | 2.07E-54 | -1.69E-46 |
| MS.gene050876 | MS.gene63951 | 0.893892 | 4.11E-75 | -1.69E-46 |
| MS.gene05087 | MS.gene63951 | 0.864848 | 9.05E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene63951 | 0.860851 | 1.55E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene63951 | 0.846821 | 1.71E-59 | -1.69E-46 |
| MS.gene051268 | MS.gene63951 | 0.802185 | 6.32E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene63951 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene051367 | MS.gene63951 | -0.801332 | 9.47E-49 | -1.69E-46 |
| MS.gene051564 | MS.gene63951 | 0.818758 | 1.66E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene63951 | 0.808651 | 2.79E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene63951 | 0.820612 | 6.26E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene63951 | 0.841515 | 4.53E-58 | -1.69E-46 |
| MS.gene052486 | MS.gene63951 | 0.853252 | 2.70E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene63951 | 0.84098 | 6.27E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene63951 | 0.817464 | 3.25E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene63951 | 0.821459 | 3.99E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene63951 | 0.80512 | 1.56E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene63951 | 0.828599 | 8.22E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene63951 | 0.813495 | 2.49E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene63951 | 0.832365 | 9.85E-56 | -1.69E-46 |
| MS.gene054616 | MS.gene63951 | -0.823338 | 1.46E-53 | -1.69E-46 |
| MS.gene054638 | MS.gene63951 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene63951 | 0.831694 | 1.44E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene63951 | 0.870665 | 1.23E-66 | -1.69E-46 |
| MS.gene055333 | MS.gene63951 | -0.81277 | 3.59E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene63951 | 0.84806 | 7.79E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene63951 | 0.848373 | 6.39E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene63951 | 0.832877 | 7.36E-56 | -1.69E-46 |
| MS.gene055634 | MS.gene63951 | 0.89544 | 9.57E-76 | -1.69E-46 |
| MS.gene055636 | MS.gene63951 | 0.833186 | 6.16E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene63951 | 0.865916 | 4.17E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene63951 | 0.802065 | 6.69E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene63951 | 0.803915 | 2.78E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene63951 | 0.833334 | 5.66E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene63951 | 0.829585 | 4.74E-55 | -1.69E-46 |
| MS.gene055776 | MS.gene63951 | 0.82244 | 2.37E-53 | -1.69E-46 |
| MS.gene055849 | MS.gene63951 | 0.864354 | 1.29E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene63951 | 0.812034 | 5.19E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene63951 | 0.81526 | 1.01E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene63951 | 0.802424 | 5.65E-49 | -1.69E-46 |
| MS.gene056449 | MS.gene63951 | 0.806998 | 6.26E-50 | -1.69E-46 |
| MS.gene056450 | MS.gene63951 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene63951 | 0.858539 | 7.69E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene63951 | 0.871598 | 6.05E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene63951 | 0.835453 | 1.66E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene63951 | 0.843865 | 1.08E-58 | -1.69E-46 |
| MS.gene056692 | MS.gene63951 | 0.827323 | 1.67E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene63951 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene057684 | MS.gene63951 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene63951 | 0.824895 | 6.30E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene63951 | 0.807775 | 4.29E-50 | -1.69E-46 |
| MS.gene057872 | MS.gene63951 | 0.828863 | 7.10E-55 | -1.69E-46 |
| MS.gene058335 | MS.gene63951 | 0.844046 | 9.63E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene63951 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene63951 | 0.838592 | 2.62E-57 | -1.69E-46 |
| MS.gene05841 | MS.gene63951 | 0.805245 | 1.47E-49 | -1.69E-46 |
| MS.gene058719 | MS.gene63951 | 0.868848 | 4.81E-66 | -1.69E-46 |
| MS.gene058773 | MS.gene63951 | 0.876071 | 1.87E-68 | -1.69E-46 |
| MS.gene058774 | MS.gene63951 | 0.802569 | 5.27E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene63951 | 0.869072 | 4.07E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene63951 | 0.830183 | 3.39E-55 | -1.69E-46 |
| MS.gene059026 | MS.gene63951 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene63951 | 0.849258 | 3.63E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene63951 | 0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene63951 | 0.847996 | 8.12E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene63951 | 0.828687 | 7.83E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene63951 | 0.852696 | 3.90E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene63951 | 0.831092 | 2.03E-55 | -1.69E-46 |
| MS.gene059865 | MS.gene63951 | 0.852093 | 5.79E-61 | -1.69E-46 |
| MS.gene060595 | MS.gene63951 | -0.831157 | 1.96E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene63951 | 0.896417 | 3.76E-76 | -1.69E-46 |
| MS.gene060762 | MS.gene63951 | 0.859355 | 4.38E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene63951 | 0.82292 | 1.83E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene63951 | 0.863907 | 1.78E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene63951 | 0.838034 | 3.65E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene63951 | 0.809749 | 1.62E-50 | -1.69E-46 |
| MS.gene061171 | MS.gene63951 | 0.833656 | 4.71E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63951.t1 | MTR_0004s0330 | 94.737 | 437 | 5 | 4 | 55 | 477 | 1 | 433 | 0.0 | 827 |
| MS.gene63951.t1 | MTR_1g096050 | 35.948 | 306 | 171 | 5 | 150 | 433 | 95 | 397 | 1.36e-56 | 195 |
| MS.gene63951.t1 | MTR_1g096200 | 35.000 | 300 | 176 | 5 | 150 | 433 | 102 | 398 | 1.35e-52 | 186 |
| MS.gene63951.t1 | MTR_1g096200 | 30.769 | 299 | 145 | 4 | 150 | 433 | 102 | 353 | 8.60e-42 | 156 |
| MS.gene63951.t1 | MTR_4g124670 | 33.716 | 261 | 157 | 6 | 164 | 412 | 141 | 397 | 1.09e-37 | 147 |
| MS.gene63951.t1 | MTR_4g124670 | 33.716 | 261 | 157 | 6 | 164 | 412 | 141 | 397 | 1.39e-37 | 147 |
| MS.gene63951.t1 | MTR_4g124670 | 33.716 | 261 | 157 | 6 | 164 | 412 | 141 | 397 | 2.00e-37 | 147 |
| MS.gene63951.t1 | MTR_4g124670 | 33.333 | 240 | 145 | 5 | 164 | 391 | 141 | 377 | 6.77e-34 | 136 |
| MS.gene63951.t1 | MTR_4g101140 | 62.338 | 77 | 23 | 1 | 1 | 77 | 49 | 119 | 7.70e-25 | 99.8 |
| MS.gene63951.t1 | MTR_4g101140 | 63.889 | 72 | 20 | 1 | 1 | 72 | 49 | 114 | 3.93e-24 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63951.t1 | AT3G50790 | 72.365 | 351 | 86 | 2 | 115 | 454 | 40 | 390 | 0.0 | 529 |
| MS.gene63951.t1 | AT3G50790 | 72.365 | 351 | 86 | 2 | 115 | 454 | 40 | 390 | 0.0 | 529 |
| MS.gene63951.t1 | AT5G49950 | 32.727 | 330 | 184 | 6 | 150 | 451 | 90 | 409 | 2.83e-54 | 190 |
| MS.gene63951.t1 | AT1G34340 | 33.993 | 303 | 175 | 4 | 150 | 430 | 96 | 395 | 6.55e-52 | 184 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.06e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.16e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 1.19e-33 | 135 |
| MS.gene63951.t1 | AT2G03140 | 29.969 | 327 | 203 | 6 | 144 | 452 | 140 | 458 | 4.22e-33 | 134 |
| MS.gene63951.t1 | AT2G03140 | 30.994 | 171 | 110 | 3 | 282 | 452 | 11 | 173 | 8.09e-16 | 81.3 |
| MS.gene63951.t1 | AT5G47570 | 76.471 | 34 | 8 | 0 | 1 | 34 | 49 | 82 | 4.88e-12 | 63.5 |
Find 144 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCACTTGGGGTGGGTTGC+TGG | 0.187173 | 4.1:+56253818 | MS.gene63951:CDS |
| CATTGATTTCCTTCAATATC+TGG | 0.213692 | 4.1:+56253883 | MS.gene63951:CDS |
| TCACACAACTGTCCTCTTTC+TGG | 0.217999 | 4.1:+56251372 | MS.gene63951:CDS |
| GTCGCTCTCGACTGGGTTTC+CGG | 0.218298 | 4.1:+56250697 | MS.gene63951:CDS |
| TGAGGCTTTGCAGTTTCTTT+TGG | 0.219847 | 4.1:+56251762 | MS.gene63951:intron |
| ATCATCTTCTTCTTCTTGTA+TGG | 0.233543 | 4.1:-56250370 | None:intergenic |
| GCTTTACTCTTTGAAGATAT+TGG | 0.238384 | 4.1:+56251594 | MS.gene63951:CDS |
| GTCTCACTTGTTGAAAATCT+TGG | 0.270386 | 4.1:-56251496 | None:intergenic |
| GATCGCATTGTTGATATTGT+TGG | 0.286500 | 4.1:+56248999 | MS.gene63951:CDS |
| TATATGCAGCCAGGCTTAAC+TGG | 0.292834 | 4.1:+56251013 | MS.gene63951:intron |
| ATGATCCGATTGCTCCTTCT+AGG | 0.295162 | 4.1:+56252831 | MS.gene63951:CDS |
| AGCCCCTTGGACTGATCCTT+TGG | 0.318720 | 4.1:+56253859 | MS.gene63951:CDS |
| TCGCCAATGCCAAGTCTGTT+AGG | 0.351137 | 4.1:+56251640 | MS.gene63951:CDS |
| TTAATTAGAGCTCGAAATAA+AGG | 0.354988 | 4.1:+56251067 | MS.gene63951:CDS |
| GCGGATCAGTCGCTCTCGAC+TGG | 0.362920 | 4.1:+56250689 | MS.gene63951:CDS |
| GCTGCAAGTTTGTGAAGCTT+TGG | 0.364350 | 4.1:-56253918 | None:intergenic |
| GATGAAGGGGAAAGGGTTGT+AGG | 0.365349 | 4.1:-56250572 | None:intergenic |
| TTCACCTGAGGAGTAGTAAC+AGG | 0.373661 | 4.1:-56251133 | None:intergenic |
| GTCACTACTAACAAGCAGTT+TGG | 0.380575 | 4.1:-56253785 | None:intergenic |
| TTTGTGCAATCCATTTGATT+TGG | 0.385740 | 4.1:+56251404 | MS.gene63951:CDS |
| GTGAGGGGTTGATCGGAAAA+AGG | 0.394531 | 4.1:-56250629 | None:intergenic |
| TCACAAACTTGCAGCAATCC+TGG | 0.394939 | 4.1:+56253926 | MS.gene63951:CDS |
| TACGGCGTTGGTTGGTCACT+CGG | 0.397610 | 4.1:+56251315 | MS.gene63951:CDS |
| ACCCTTTCCCCTTCATCACT+TGG | 0.398845 | 4.1:+56250578 | MS.gene63951:CDS |
| TACCCCGATGCTAATTTATA+CGG | 0.399807 | 4.1:+56251297 | MS.gene63951:CDS |
| GGGAGAGAGGTAAGAAGAAA+TGG | 0.403095 | 4.1:-56250349 | None:intergenic |
| CGAAGGATGGATGAGGTTGT+TGG | 0.408841 | 4.1:-56250492 | None:intergenic |
| ATGCGATCTATACAAGGTTC+AGG | 0.417127 | 4.1:-56248984 | None:intergenic |
| TCATCTTCTTCTTCTTGTAT+GGG | 0.437295 | 4.1:-56250369 | None:intergenic |
| GAAGCATTGGCGTGGCTTTG+TGG | 0.438910 | 4.1:+56249029 | MS.gene63951:CDS |
| TCACGAGGAATTCCCCTAGA+AGG | 0.445703 | 4.1:-56252845 | None:intergenic |
| AAAATGAGGAGTGGAGCGTC+AGG | 0.451758 | 4.1:-56250739 | None:intergenic |
| GACATCTAAAGGTGGTCACT+TGG | 0.451985 | 4.1:+56253805 | MS.gene63951:CDS |
| ATGAAGGGGAAAGGGTTGTA+GGG | 0.470477 | 4.1:-56250571 | None:intergenic |
| AATGTCTCTTTATTAACTCC+AGG | 0.470588 | 4.1:-56253944 | None:intergenic |
| TTCTGAGGCAGTGACGGCGG+AGG | 0.471105 | 4.1:-56250657 | None:intergenic |
| CGCCAATGCCAAGTCTGTTA+GGG | 0.473616 | 4.1:+56251641 | MS.gene63951:CDS |
| TCTGTTAGGGACTTTGATGA+TGG | 0.481892 | 4.1:+56251654 | MS.gene63951:CDS |
| ACGCCGTATAAATTAGCATC+GGG | 0.482282 | 4.1:-56251300 | None:intergenic |
| TCTGACACAACCAAATCAAA+TGG | 0.482525 | 4.1:-56251414 | None:intergenic |
| CTTCTTCTTGTATGGGAGAG+AGG | 0.484170 | 4.1:-56250362 | None:intergenic |
| CTAAAGGTGGTCACTTGGGG+TGG | 0.486145 | 4.1:+56253810 | MS.gene63951:CDS |
| GTGGCGGTTCCAAGTGATGA+AGG | 0.494493 | 4.1:-56250587 | None:intergenic |
| AACACCTTTGCTGTGCATCC+AGG | 0.498593 | 4.1:+56251848 | MS.gene63951:CDS |
| ATGGATGAGGTTGTTGGATG+AGG | 0.499845 | 4.1:-56250486 | None:intergenic |
| TAAAGGTGGTCACTTGGGGT+GGG | 0.500677 | 4.1:+56253811 | MS.gene63951:CDS |
| ACATCTAAAGGTGGTCACTT+GGG | 0.501596 | 4.1:+56253806 | MS.gene63951:CDS |
| CATGTAGGTTCTTCATTCAT+CGG | 0.502667 | 4.1:-56248942 | None:intergenic |
| CGATGAATGAAGAACCTACA+TGG | 0.502752 | 4.1:+56248943 | None:intergenic |
| CCAGGCTTAACTGGAGGTAG+TGG | 0.509867 | 4.1:+56251022 | MS.gene63951:CDS |
| AAAGATACAGCACCAGAAAG+AGG | 0.516125 | 4.1:-56251384 | None:intergenic |
| CTAATTTATACGGCGTTGGT+TGG | 0.518444 | 4.1:+56251307 | MS.gene63951:CDS |
| TGATCCGATTGCTCCTTCTA+GGG | 0.518603 | 4.1:+56252832 | MS.gene63951:CDS |
| ATTGGTTGTGTGGAGCTTGA+CGG | 0.518819 | 4.1:+56249082 | MS.gene63951:CDS |
| TGTCCGTAGACATTGTTACT+TGG | 0.519822 | 4.1:-56250462 | None:intergenic |
| GGGAATGGCAACAGCAAGGG+TGG | 0.520556 | 4.1:+56250318 | MS.gene63951:intron |
| AAGCTCCACTTGGAGCCCCT+TGG | 0.524317 | 4.1:+56253846 | MS.gene63951:CDS |
| TAGCCCTGTTACTACTCCTC+AGG | 0.524505 | 4.1:+56251129 | MS.gene63951:CDS |
| TCCAAGTGATGAAGGGGAAA+GGG | 0.528450 | 4.1:-56250579 | None:intergenic |
| CTTCTGTCTCCAGATATTGA+AGG | 0.530990 | 4.1:-56253892 | None:intergenic |
| GACGGCGGAGGGTGACGTGA+GGG | 0.531778 | 4.1:-56250645 | None:intergenic |
| CGGGGTATCTATCAGAGACA+TGG | 0.532744 | 4.1:-56251281 | None:intergenic |
| GATGCTAATTTATACGGCGT+TGG | 0.533145 | 4.1:+56251303 | MS.gene63951:CDS |
| CGGATCAGTCGCTCTCGACT+GGG | 0.533982 | 4.1:+56250690 | MS.gene63951:CDS |
| CTTGAGTTCTGAGGCAGTGA+CGG | 0.534168 | 4.1:-56250663 | None:intergenic |
| CCACTACCTCCAGTTAAGCC+TGG | 0.534467 | 4.1:-56251022 | None:intergenic |
| GGGTGACGTGAGGGGTTGAT+CGG | 0.535213 | 4.1:-56250636 | None:intergenic |
| TTACTCTTTGAAGATATTGG+TGG | 0.535835 | 4.1:+56251597 | MS.gene63951:CDS |
| CATCCATCCTTCGAAATACT+CGG | 0.537417 | 4.1:+56250502 | MS.gene63951:CDS |
| GCTGGTGACGAAGCTCCACT+TGG | 0.538367 | 4.1:+56253836 | MS.gene63951:CDS |
| CGTGTCACGTGAGTTAGAGA+TGG | 0.538906 | 4.1:-56250547 | None:intergenic |
| GAGTTAGAGATGGGAGGAAA+CGG | 0.544685 | 4.1:-56250537 | None:intergenic |
| CCTCCGAGTATTTCGAAGGA+TGG | 0.549587 | 4.1:-56250505 | None:intergenic |
| TCAGATGCGGACTTCCGAAA+AGG | 0.550315 | 4.1:+56251432 | MS.gene63951:CDS |
| AGGCAAGCGACGGTCATCAC+CGG | 0.550890 | 4.1:-56250716 | None:intergenic |
| TGTTGGAATGTATGAAGCAT+TGG | 0.551260 | 4.1:+56249016 | MS.gene63951:CDS |
| TTCCAAGTGATGAAGGGGAA+AGG | 0.551337 | 4.1:-56250580 | None:intergenic |
| TGACGGCGGAGGGTGACGTG+AGG | 0.552850 | 4.1:-56250646 | None:intergenic |
| AATTCCTCGTGAAGATATCA+AGG | 0.554084 | 4.1:+56252856 | MS.gene63951:CDS |
| TTGTTAGTAGTGACATCTAA+AGG | 0.555470 | 4.1:+56253794 | MS.gene63951:CDS |
| ATTCCCCTAGAAGGAGCAAT+CGG | 0.555800 | 4.1:-56252836 | None:intergenic |
| CGTAGACATTGTTACTTGGA+CGG | 0.557114 | 4.1:-56250458 | None:intergenic |
| TGTCACACTACACTTGAAGA+TGG | 0.560746 | 4.1:-56253970 | None:intergenic |
| CGTCCAAGTAACAATGTCTA+CGG | 0.564274 | 4.1:+56250459 | MS.gene63951:CDS |
| ATCAAAGTCCCTAACAGACT+TGG | 0.566652 | 4.1:-56251649 | None:intergenic |
| CTTTAACAAAATTTACGACA+AGG | 0.567659 | 4.1:+56251455 | MS.gene63951:CDS |
| ACGGCGGAGGGTGACGTGAG+GGG | 0.568008 | 4.1:-56250644 | None:intergenic |
| CACTGCCTCAGAACTCAAGA+TGG | 0.569186 | 4.1:+56250667 | MS.gene63951:CDS |
| CATCTAAAGGTGGTCACTTG+GGG | 0.569461 | 4.1:+56253807 | MS.gene63951:CDS |
| GTCCCTAACAGACTTGGCAT+TGG | 0.571770 | 4.1:-56251643 | None:intergenic |
| TCAACAATGCGATCTATACA+AGG | 0.576574 | 4.1:-56248990 | None:intergenic |
| CACACTACACTTGAAGATGG+TGG | 0.585286 | 4.1:-56253967 | None:intergenic |
| GTGTTCAATAGTCGTGGCTG+TGG | 0.585296 | 4.1:+56251103 | MS.gene63951:CDS |
| GGCGGTTCCAAGTGATGAAG+GGG | 0.589583 | 4.1:-56250585 | None:intergenic |
| GAAGTACCATTGTCCCATGT+AGG | 0.591902 | 4.1:-56248957 | None:intergenic |
| TGTAGGGAATGGCAACAGCA+AGG | 0.593091 | 4.1:+56250314 | MS.gene63951:intron |
| TCTGAGGCAGTGACGGCGGA+GGG | 0.593993 | 4.1:-56250656 | None:intergenic |
| GACTTGGCATTGGCGACCAG+TGG | 0.595642 | 4.1:-56251633 | None:intergenic |
| GTTTGAGATTATTGGTTGTG+TGG | 0.596780 | 4.1:+56249072 | MS.gene63951:CDS |
| GTGTCACGTGAGTTAGAGAT+GGG | 0.598185 | 4.1:-56250546 | None:intergenic |
| TGGCGGTTCCAAGTGATGAA+GGG | 0.599267 | 4.1:-56250586 | None:intergenic |
| ATGACCAAAGGATCAGTCCA+AGG | 0.601776 | 4.1:-56253863 | None:intergenic |
| AACGCCGTATAAATTAGCAT+CGG | 0.610252 | 4.1:-56251301 | None:intergenic |
| AGAGGTAAGAAGAAATGGTG+TGG | 0.611249 | 4.1:-56250344 | None:intergenic |
| GTAGGGAATGGCAACAGCAA+GGG | 0.611463 | 4.1:+56250315 | MS.gene63951:intron |
| AACGACGAACCAGTAAAATG+AGG | 0.612077 | 4.1:-56250753 | None:intergenic |
| AAGATGATGATGATGACAAG+TGG | 0.613086 | 4.1:-56250420 | None:intergenic |
| TCTACCTGGATGCACAGCAA+AGG | 0.613318 | 4.1:-56251852 | None:intergenic |
| AGTATTTCGAAGGATGGATG+AGG | 0.614109 | 4.1:-56250499 | None:intergenic |
| TGACCAAAGGATCAGTCCAA+GGG | 0.614947 | 4.1:-56253862 | None:intergenic |
| GAGCGTCAGGAGGCAAGCGA+CGG | 0.617494 | 4.1:-56250726 | None:intergenic |
| GTTGTTGTGTTCAATAGTCG+TGG | 0.617662 | 4.1:+56251097 | MS.gene63951:CDS |
| ATCCGCCATCTTGAGTTCTG+AGG | 0.619044 | 4.1:-56250672 | None:intergenic |
| GGAATGGCAACAGCAAGGGT+GGG | 0.621032 | 4.1:+56250319 | MS.gene63951:CDS |
| TGATTTGGTTGTGTCAGATG+CGG | 0.623966 | 4.1:+56251419 | MS.gene63951:CDS |
| ATGAGGAGTGGAGCGTCAGG+AGG | 0.624232 | 4.1:-56250736 | None:intergenic |
| GAAAATCTTGGAGAGAGCTG+AGG | 0.625974 | 4.1:-56251484 | None:intergenic |
| TTAGAGCTCGAAATAAAGGA+TGG | 0.627421 | 4.1:+56251071 | MS.gene63951:CDS |
| TGCGCCTCCGAGTATTTCGA+AGG | 0.629018 | 4.1:-56250509 | None:intergenic |
| GATCCGATTGCTCCTTCTAG+GGG | 0.631370 | 4.1:+56252833 | MS.gene63951:CDS |
| TGAAGGAAATCAATGACCAA+AGG | 0.632751 | 4.1:-56253875 | None:intergenic |
| TGGTGAATATAACATTCCAC+TGG | 0.636196 | 4.1:+56251617 | MS.gene63951:CDS |
| GAAGAACCTACATGGGACAA+TGG | 0.636811 | 4.1:+56248951 | MS.gene63951:CDS |
| CGAAGATGGTTTCGACGTGG+CGG | 0.637931 | 4.1:-56250603 | None:intergenic |
| TGAAGGGGAAAGGGTTGTAG+GGG | 0.640156 | 4.1:-56250570 | None:intergenic |
| GCATTGGCGTGGCTTTGTGG+CGG | 0.641107 | 4.1:+56249032 | MS.gene63951:CDS |
| TTCAATAGTCGTGGCTGTGG+AGG | 0.645656 | 4.1:+56251106 | MS.gene63951:CDS |
| TGCCTCAGAACTCAAGATGG+CGG | 0.650311 | 4.1:+56250670 | MS.gene63951:CDS |
| GAGTTCTGAGGCAGTGACGG+CGG | 0.651911 | 4.1:-56250660 | None:intergenic |
| GGGGTATCTATCAGAGACAT+GGG | 0.655174 | 4.1:-56251280 | None:intergenic |
| TCAGTCCAAGGGGCTCCAAG+TGG | 0.656424 | 4.1:-56253851 | None:intergenic |
| GATGAATGAAGAACCTACAT+GGG | 0.657848 | 4.1:+56248944 | None:intergenic |
| CGAACCAGTAAAATGAGGAG+TGG | 0.658465 | 4.1:-56250748 | None:intergenic |
| TTTGATGATGGACTCACCCG+TGG | 0.662842 | 4.1:+56251666 | MS.gene63951:CDS |
| GAATGTATGAAGCATTGGCG+TGG | 0.676927 | 4.1:+56249021 | MS.gene63951:CDS |
| TCACGTGAGTTAGAGATGGG+AGG | 0.683312 | 4.1:-56250543 | None:intergenic |
| GACCAAAGGATCAGTCCAAG+GGG | 0.688758 | 4.1:-56253861 | None:intergenic |
| CATACCTTGATATCTTCACG+AGG | 0.689305 | 4.1:-56252860 | None:intergenic |
| ATGCAGCCAGGCTTAACTGG+AGG | 0.690608 | 4.1:+56251016 | MS.gene63951:intron |
| TTAGTAGTGACATCTAAAGG+TGG | 0.694576 | 4.1:+56253797 | MS.gene63951:CDS |
| CGCCGTATAAATTAGCATCG+GGG | 0.704690 | 4.1:-56251299 | None:intergenic |
| TCACCTGAGGAGTAGTAACA+GGG | 0.708705 | 4.1:-56251132 | None:intergenic |
| CCATCCTTCGAAATACTCGG+AGG | 0.746937 | 4.1:+56250505 | MS.gene63951:CDS |
| AAGCGAAGATGGTTTCGACG+TGG | 0.747045 | 4.1:-56250606 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATTGAATCAATAAA+TGG | - | chr4.1:56252001-56252020 | None:intergenic | 10.0% |
| !! | GAAAAAAGAAAAAAAAAATA+AGG | - | chr4.1:56249490-56249509 | None:intergenic | 10.0% |
| !!! | AATTTTAAATGATTAAATAG+TGG | + | chr4.1:56249381-56249400 | MS.gene63951:intron | 10.0% |
| !!! | GAAATTTTGTTATAAAATTT+TGG | - | chr4.1:56253116-56253135 | None:intergenic | 10.0% |
| !!! | TTTACTTTTTTTTTTTTTTG+TGG | - | chr4.1:56250891-56250910 | None:intergenic | 10.0% |
| !!! | TTTTTTTTAAATTGTATCTA+CGG | + | chr4.1:56251169-56251188 | MS.gene63951:intron | 10.0% |
| !! | AAAAAATGTGAGAATTAAAA+AGG | + | chr4.1:56250064-56250083 | MS.gene63951:intron | 15.0% |
| !! | AAAAATGTGAGAATTAAAAA+GGG | + | chr4.1:56250065-56250084 | MS.gene63951:intron | 15.0% |
| !! | GATTCAATTATAATAAGTAA+GGG | + | chr4.1:56252007-56252026 | MS.gene63951:intron | 15.0% |
| !! | TAAATGATTAAGGTTATTAT+AGG | + | chr4.1:56249675-56249694 | MS.gene63951:intron | 15.0% |
| !! | TAGTTAATATAGATAGATAT+AGG | - | chr4.1:56253625-56253644 | None:intergenic | 15.0% |
| !! | TATAACAAAATTTCCATTTA+TGG | + | chr4.1:56253122-56253141 | MS.gene63951:intron | 15.0% |
| !! | TGATTCAATTATAATAAGTA+AGG | + | chr4.1:56252006-56252025 | MS.gene63951:intron | 15.0% |
| !!! | AACTTTTCTCTTTTATTTTT+GGG | + | chr4.1:56251562-56251581 | MS.gene63951:intron | 15.0% |
| !!! | AATGAAGTATTAAATGATTA+AGG | + | chr4.1:56249665-56249684 | MS.gene63951:intron | 15.0% |
| !!! | ATAAGGTTTTTATATATGTT+CGG | - | chr4.1:56249473-56249492 | None:intergenic | 15.0% |
| !!! | ATATATTGTTTTTTATACGA+TGG | - | chr4.1:56252776-56252795 | None:intergenic | 15.0% |
| !!! | ATTTTGAGAAAAAAAAATCA+AGG | + | chr4.1:56249913-56249932 | MS.gene63951:intron | 15.0% |
| !! | AAACAAAGATTAGCAAATTA+AGG | + | chr4.1:56249408-56249427 | MS.gene63951:intron | 20.0% |
| !! | AAAGTAAAATTCTATTTGCA+AGG | + | chr4.1:56250903-56250922 | MS.gene63951:intron | 20.0% |
| !! | AACAAAGATTAGCAAATTAA+GGG | + | chr4.1:56249409-56249428 | MS.gene63951:intron | 20.0% |
| !! | AAGATGAATACTATTTATGT+TGG | + | chr4.1:56253565-56253584 | MS.gene63951:intron | 20.0% |
| !! | AAGTAAAATTCTATTTGCAA+GGG | + | chr4.1:56250904-56250923 | MS.gene63951:intron | 20.0% |
| !! | AAGTAAAATTCTATTTGTTC+CGG | + | chr4.1:56250799-56250818 | MS.gene63951:intron | 20.0% |
| !! | AATAATAAATGCAATTTGTG+TGG | + | chr4.1:56249863-56249882 | MS.gene63951:intron | 20.0% |
| !! | ATTAAGGAATCATTATTGTA+TGG | - | chr4.1:56249965-56249984 | None:intergenic | 20.0% |
| !! | TAAATATATAGGGGTAATAT+AGG | - | chr4.1:56249625-56249644 | None:intergenic | 20.0% |
| !! | TATGAAGTTAATTTCCAAAT+GGG | + | chr4.1:56252568-56252587 | MS.gene63951:intron | 20.0% |
| !! | TTATGAAGTTAATTTCCAAA+TGG | + | chr4.1:56252567-56252586 | MS.gene63951:intron | 20.0% |
| !!! | AAATAGAATTTTACTTTGGT+TGG | - | chr4.1:56250795-56250814 | None:intergenic | 20.0% |
| !!! | AAATTTTGTTAAAGCCTTTT+CGG | - | chr4.1:56251449-56251468 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTTTTTTGTGG+CGG | - | chr4.1:56250888-56250907 | None:intergenic | 20.0% |
| !!! | CAACTTTTCTCTTTTATTTT+TGG | + | chr4.1:56251561-56251580 | MS.gene63951:intron | 20.0% |
| !!! | CATTTTCCATTTAAAAAGAT+TGG | + | chr4.1:56252447-56252466 | MS.gene63951:intron | 20.0% |
| !!! | GAACAAATAGAATTTTACTT+TGG | - | chr4.1:56250799-56250818 | None:intergenic | 20.0% |
| !!! | GACATTTCATGATTTAAAAT+TGG | + | chr4.1:56249254-56249273 | MS.gene63951:intron | 20.0% |
| !!! | TTCTAAAACATCAAAAGAAA+AGG | - | chr4.1:56249743-56249762 | None:intergenic | 20.0% |
| !!! | TTCTAAAACATCAAAAGTTT+TGG | - | chr4.1:56249779-56249798 | None:intergenic | 20.0% |
| !!! | TTGTTATAAAATTTTGGAGA+AGG | - | chr4.1:56253110-56253129 | None:intergenic | 20.0% |
| !!! | TTGTTGACTAAAAATGTATT+CGG | + | chr4.1:56252919-56252938 | MS.gene63951:intron | 20.0% |
| ! | AAAAAAAAATGATTCACCTG+AGG | - | chr4.1:56251148-56251167 | None:intergenic | 25.0% |
| ! | AAAAAATCAAGGAGTAAGTA+AGG | + | chr4.1:56249924-56249943 | MS.gene63951:intron | 25.0% |
| ! | AAAAATCAAGGAGTAAGTAA+GGG | + | chr4.1:56249925-56249944 | MS.gene63951:intron | 25.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | + | chr4.1:56250002-56250021 | MS.gene63951:intron | 25.0% |
| ! | AAACATCAAAAGAAAAGGAA+TGG | - | chr4.1:56250021-56250002 | None:intergenic | 25.0% |
| ! | AAATATTCTTGTTCGTTACT+TGG | + | chr4.1:56251341-56251360 | MS.gene63951:intron | 25.0% |
| ! | AAATGAGGAAAATGAATTGA+TGG | + | chr4.1:56249287-56249306 | MS.gene63951:intron | 25.0% |
| ! | AAATGTGATGGTTGAAAAAA+CGG | - | chr4.1:56253237-56253256 | None:intergenic | 25.0% |
| ! | AAGAATGAATTGGAATTTCA+AGG | + | chr4.1:56249223-56249242 | MS.gene63951:intron | 25.0% |
| ! | AATAAATGATAAGTCCCATT+TGG | - | chr4.1:56252585-56252604 | None:intergenic | 25.0% |
| ! | AATATTCTTGTTCGTTACTT+GGG | + | chr4.1:56251342-56251361 | MS.gene63951:intron | 25.0% |
| ! | AATCCATGAATTGGAATTTA+AGG | + | chr4.1:56249138-56249157 | MS.gene63951:intron | 25.0% |
| ! | ACCTAAAACATCAAAAGAAA+AGG | + | chr4.1:56249997-56250016 | MS.gene63951:intron | 25.0% |
| ! | AGAATGAATTGGAATTTCAA+GGG | + | chr4.1:56249224-56249243 | MS.gene63951:intron | 25.0% |
| ! | AGCAAAAGTGACAATTATAA+AGG | - | chr4.1:56249538-56249557 | None:intergenic | 25.0% |
| ! | ATCCATGAATTGGAATTTAA+GGG | + | chr4.1:56249139-56249158 | MS.gene63951:intron | 25.0% |
| ! | ATTGGAATTTCACATAAATG+AGG | + | chr4.1:56249272-56249291 | MS.gene63951:intron | 25.0% |
| ! | CAGAAGAGTGAAATTTAAAT+GGG | + | chr4.1:56252517-56252536 | MS.gene63951:intron | 25.0% |
| ! | CTCTCTGCAATAAATATATA+GGG | - | chr4.1:56249635-56249654 | None:intergenic | 25.0% |
| ! | CTTTAACAAAATTTACGACA+AGG | + | chr4.1:56251455-56251474 | MS.gene63951:CDS | 25.0% |
| ! | GACAATGCATAATATATTCA+AGG | + | chr4.1:56250844-56250863 | MS.gene63951:intron | 25.0% |
| ! | GTCTGTGTATTAAATATCAT+TGG | - | chr4.1:56253460-56253479 | None:intergenic | 25.0% |
| ! | TCTCTCTGCAATAAATATAT+AGG | - | chr4.1:56249636-56249655 | None:intergenic | 25.0% |
| ! | TCTCTGCAATAAATATATAG+GGG | - | chr4.1:56249634-56249653 | None:intergenic | 25.0% |
| ! | TTAATTAGAGCTCGAAATAA+AGG | + | chr4.1:56251067-56251086 | MS.gene63951:CDS | 25.0% |
| ! | TTGGTTGTTAAGATATGTTT+GGG | + | chr4.1:56253346-56253365 | MS.gene63951:intron | 25.0% |
| !! | GAAAAACACACTTTGAAAAT+TGG | + | chr4.1:56249833-56249852 | MS.gene63951:intron | 25.0% |
| !! | GTTCAAAGTATCATTAAATG+TGG | + | chr4.1:56249594-56249613 | MS.gene63951:intron | 25.0% |
| !! | TCATACTAACTTGTAAAAGT+TGG | + | chr4.1:56251693-56251712 | MS.gene63951:intron | 25.0% |
| !! | TCATTGCCAATCTTTTTAAA+TGG | - | chr4.1:56252456-56252475 | None:intergenic | 25.0% |
| !! | TCCTTTTCTTTTGATGTTTT+AGG | - | chr4.1:56249758-56249739 | None:intergenic | 25.0% |
| !! | TTTTTAAATTGTATCTACGG+TGG | + | chr4.1:56251172-56251191 | MS.gene63951:intron | 25.0% |
| !!! | GTGAAATTTAAAGCCTTATT+TGG | - | chr4.1:56252249-56252268 | None:intergenic | 25.0% |
| !!! | TGATTCAGTGGATTATTTTA+TGG | + | chr4.1:56253313-56253332 | MS.gene63951:intron | 25.0% |
| !!! | TTTTTCAACAAGGGTAAAAT+TGG | - | chr4.1:56249819-56249838 | None:intergenic | 25.0% |
| AATGGAAGAACAAAGTGTAT+TGG | + | chr4.1:56252542-56252561 | MS.gene63951:intron | 30.0% | |
| AATGTCTCTTTATTAACTCC+AGG | - | chr4.1:56253947-56253966 | None:intergenic | 30.0% | |
| ACAATGTTTAAATGGGATGA+GGG | + | chr4.1:56249354-56249373 | MS.gene63951:intron | 30.0% | |
| ACACGTGACAATGTTTAAAT+GGG | + | chr4.1:56249347-56249366 | MS.gene63951:intron | 30.0% | |
| ACATATCCAAGAGAAACAAA+AGG | - | chr4.1:56251904-56251923 | None:intergenic | 30.0% | |
| AGGTGATTGCACAAATATTA+AGG | - | chr4.1:56249981-56250000 | None:intergenic | 30.0% | |
| AGTGTTTGTTTAGACGAAAT+AGG | + | chr4.1:56252059-56252078 | MS.gene63951:intron | 30.0% | |
| ATCAAAAGAAAAGGAATGGA+GGG | + | chr4.1:56250006-56250025 | MS.gene63951:intron | 30.0% | |
| ATCAAAAGAAAAGGAATGGA+GGG | - | chr4.1:56250025-56250006 | None:intergenic | 30.0% | |
| ATCATCTTCTTCTTCTTGTA+TGG | - | chr4.1:56250373-56250392 | None:intergenic | 30.0% | |
| ATGTTAATAAAGACTAACCC+TGG | - | chr4.1:56253710-56253729 | None:intergenic | 30.0% | |
| CATATCCAAGAGAAACAAAA+GGG | - | chr4.1:56251903-56251922 | None:intergenic | 30.0% | |
| CTTGGTTGTTAAGATATGTT+TGG | + | chr4.1:56253345-56253364 | MS.gene63951:intron | 30.0% | |
| GACAATTATAAAGGAACAGA+GGG | - | chr4.1:56249529-56249548 | None:intergenic | 30.0% | |
| GCAGAAGAGTGAAATTTAAA+TGG | + | chr4.1:56252516-56252535 | MS.gene63951:intron | 30.0% | |
| GTGGTGAGTTTCAATAATTA+AGG | + | chr4.1:56249882-56249901 | MS.gene63951:intron | 30.0% | |
| TAAAGCCTTAGTACCAAATA+AGG | + | chr4.1:56252233-56252252 | MS.gene63951:intron | 30.0% | |
| TCATCTTCTTCTTCTTGTAT+GGG | - | chr4.1:56250372-56250391 | None:intergenic | 30.0% | |
| TCCATGAATTGGAATTTAAG+GGG | + | chr4.1:56249140-56249159 | MS.gene63951:intron | 30.0% | |
| TGACAATTATAAAGGAACAG+AGG | - | chr4.1:56249530-56249549 | None:intergenic | 30.0% | |
| TGCATAATATATTCAAGGTC+CGG | + | chr4.1:56250849-56250868 | MS.gene63951:intron | 30.0% | |
| TGGTACATATGAAAATGTGA+TGG | - | chr4.1:56253249-56253268 | None:intergenic | 30.0% | |
| TGTTAATAAAGACTAACCCT+GGG | - | chr4.1:56253709-56253728 | None:intergenic | 30.0% | |
| TTAAATCTCACAATTAGGAG+TGG | - | chr4.1:56252216-56252235 | None:intergenic | 30.0% | |
| TTAAATTTCACAATCAGGAG+TGG | + | chr4.1:56252258-56252277 | MS.gene63951:intron | 30.0% | |
| TTGTTAGTAGTGACATCTAA+AGG | + | chr4.1:56253794-56253813 | MS.gene63951:CDS | 30.0% | |
| TTTGTGCAATCCATTTGATT+TGG | + | chr4.1:56251404-56251423 | MS.gene63951:CDS | 30.0% | |
| ! | AGTGAGTTTTTCATGATAAC+AGG | - | chr4.1:56252106-56252125 | None:intergenic | 30.0% |
| ! | ATTTTATGGTATACGTCACT+TGG | + | chr4.1:56253327-56253346 | MS.gene63951:intron | 30.0% |
| ! | CGATTTCATTTGTTGATGAA+TGG | + | chr4.1:56253006-56253025 | MS.gene63951:intron | 30.0% |
| ! | GCTTTACTCTTTGAAGATAT+TGG | + | chr4.1:56251594-56251613 | MS.gene63951:CDS | 30.0% |
| ! | GTGAGTTTTTCATGATAACA+GGG | - | chr4.1:56252105-56252124 | None:intergenic | 30.0% |
| ! | TAGAGTCAAAATTTTCTACC+TGG | - | chr4.1:56251869-56251888 | None:intergenic | 30.0% |
| ! | TCATTTGTTGATGAATGGTA+TGG | + | chr4.1:56253011-56253030 | MS.gene63951:intron | 30.0% |
| ! | TGAGTTTTTCATGATAACAG+GGG | - | chr4.1:56252104-56252123 | None:intergenic | 30.0% |
| ! | TTACTCTTTGAAGATATTGG+TGG | + | chr4.1:56251597-56251616 | MS.gene63951:CDS | 30.0% |
| ! | TTCAATATGAAGCACTCAAA+AGG | - | chr4.1:56252166-56252185 | None:intergenic | 30.0% |
| !! | AGGCTTTAAATCTCACAATT+AGG | - | chr4.1:56252221-56252240 | None:intergenic | 30.0% |
| !! | AGGCTTTAAATTTCACAATC+AGG | + | chr4.1:56252253-56252272 | MS.gene63951:intron | 30.0% |
| !! | CAAAGTGTGTTTTTCAACAA+GGG | - | chr4.1:56249828-56249847 | None:intergenic | 30.0% |
| !! | CATTGATTTCCTTCAATATC+TGG | + | chr4.1:56253883-56253902 | MS.gene63951:CDS | 30.0% |
| !! | GAGTTTTATCGAAAATGTGA+TGG | + | chr4.1:56250103-56250122 | MS.gene63951:intron | 30.0% |
| !! | GTGAAATTTAAATGGGCTAA+TGG | + | chr4.1:56252524-56252543 | MS.gene63951:intron | 30.0% |
| !! | GTTTTTAGGAGATATGTATG+AGG | + | chr4.1:56251251-56251270 | MS.gene63951:CDS | 30.0% |
| !! | TAAAGCCTTATTTGGTACTA+AGG | - | chr4.1:56252241-56252260 | None:intergenic | 30.0% |
| !! | TCAAAGTGTGTTTTTCAACA+AGG | - | chr4.1:56249829-56249848 | None:intergenic | 30.0% |
| !! | TTCTATTCAGCATCGTTTTT+AGG | + | chr4.1:56251237-56251256 | MS.gene63951:CDS | 30.0% |
| !!! | TTGGAATTTCAAGGGTATTT+TGG | + | chr4.1:56249232-56249251 | MS.gene63951:intron | 30.0% |
| AACGCCGTATAAATTAGCAT+CGG | - | chr4.1:56251304-56251323 | None:intergenic | 35.0% | |
| AAGTCACTGCAGTTATAATC+TGG | + | chr4.1:56253392-56253411 | MS.gene63951:intron | 35.0% | |
| AAGTGTCAACAAAATCACAG+TGG | - | chr4.1:56251199-56251218 | None:intergenic | 35.0% | |
| AATGATCGTTCTATGTTGTC+AGG | + | chr4.1:56253757-56253776 | MS.gene63951:intron | 35.0% | |
| AATTCCTCGTGAAGATATCA+AGG | + | chr4.1:56252856-56252875 | MS.gene63951:CDS | 35.0% | |
| ACATGCTTGGTATATAACAG+AGG | - | chr4.1:56253208-56253227 | None:intergenic | 35.0% | |
| ACCCCTTAAATTCCAATTCA+TGG | - | chr4.1:56249144-56249163 | None:intergenic | 35.0% | |
| AGTTATAATCTGGTAGCTGT+TGG | + | chr4.1:56253402-56253421 | MS.gene63951:intron | 35.0% | |
| ATACACCAAGTAATAGCATG+TGG | + | chr4.1:56250279-56250298 | MS.gene63951:intron | 35.0% | |
| CACACGTGACAATGTTTAAA+TGG | + | chr4.1:56249346-56249365 | MS.gene63951:intron | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | + | chr4.1:56250005-56250024 | MS.gene63951:intron | 35.0% | |
| CATCAAAAGAAAAGGAATGG+AGG | - | chr4.1:56250024-56250005 | None:intergenic | 35.0% | |
| CGGCATTTGAATTCCATAAA+TGG | - | chr4.1:56253138-56253157 | None:intergenic | 35.0% | |
| GAATGCTGAGATTTATCAAC+TGG | - | chr4.1:56252142-56252161 | None:intergenic | 35.0% | |
| GACAACAAAAAAACACCACA+TGG | - | chr4.1:56249112-56249131 | None:intergenic | 35.0% | |
| GACAATGTTTAAATGGGATG+AGG | + | chr4.1:56249353-56249372 | MS.gene63951:intron | 35.0% | |
| GATCGCATTGTTGATATTGT+TGG | + | chr4.1:56248999-56249018 | MS.gene63951:CDS | 35.0% | |
| GCATAATATATTCAAGGTCC+GGG | + | chr4.1:56250850-56250869 | MS.gene63951:intron | 35.0% | |
| GGTCCCTGTTAATAGAAATA+GGG | - | chr4.1:56249452-56249471 | None:intergenic | 35.0% | |
| GTCACATTGAATCCATGAAT+TGG | + | chr4.1:56249129-56249148 | MS.gene63951:intron | 35.0% | |
| GTCCCTGTTAATAGAAATAG+GGG | - | chr4.1:56249451-56249470 | None:intergenic | 35.0% | |
| GTGCAAATCACATTTGATAG+TGG | - | chr4.1:56251973-56251992 | None:intergenic | 35.0% | |
| GTGTAAAAGAGATCGAGAAT+AGG | + | chr4.1:56252947-56252966 | MS.gene63951:intron | 35.0% | |
| GTTAATAAAGACTAACCCTG+GGG | - | chr4.1:56253708-56253727 | None:intergenic | 35.0% | |
| TAAACTGTGATTCCTTGGTT+TGG | + | chr4.1:56250160-56250179 | MS.gene63951:intron | 35.0% | |
| TACACCAAGTAATAGCATGT+GGG | + | chr4.1:56250280-56250299 | MS.gene63951:intron | 35.0% | |
| TACCCCGATGCTAATTTATA+CGG | + | chr4.1:56251297-56251316 | MS.gene63951:CDS | 35.0% | |
| TCAACAATGCGATCTATACA+AGG | - | chr4.1:56248993-56249012 | None:intergenic | 35.0% | |
| TCTGACACAACCAAATCAAA+TGG | - | chr4.1:56251417-56251436 | None:intergenic | 35.0% | |
| TGAAGGAAATCAATGACCAA+AGG | - | chr4.1:56253878-56253897 | None:intergenic | 35.0% | |
| TGCTGAGATACTCTTATATG+AGG | + | chr4.1:56251744-56251763 | MS.gene63951:intron | 35.0% | |
| TGGTGAATATAACATTCCAC+TGG | + | chr4.1:56251617-56251636 | MS.gene63951:CDS | 35.0% | |
| TGTAGTTAAAATAGCGTCGT+CGG | - | chr4.1:56253158-56253177 | None:intergenic | 35.0% | |
| TGTTGGAATGTATGAAGCAT+TGG | + | chr4.1:56249016-56249035 | MS.gene63951:CDS | 35.0% | |
| TTAGAGCTCGAAATAAAGGA+TGG | + | chr4.1:56251071-56251090 | MS.gene63951:CDS | 35.0% | |
| TTAGTAGTGACATCTAAAGG+TGG | + | chr4.1:56253797-56253816 | MS.gene63951:CDS | 35.0% | |
| TTGTCAAACACACACACTTT+AGG | - | chr4.1:56252330-56252349 | None:intergenic | 35.0% | |
| TTGTTTGATTATATGCAGCC+AGG | + | chr4.1:56251004-56251023 | MS.gene63951:intron | 35.0% | |
| ! | AAGATGATGATGATGACAAG+TGG | - | chr4.1:56250423-56250442 | None:intergenic | 35.0% |
| ! | AATTTAAGGGGTGTGAATTG+TGG | + | chr4.1:56249152-56249171 | MS.gene63951:intron | 35.0% |
| ! | AGGTGTTTGAACGTGTTTTA+TGG | - | chr4.1:56251835-56251854 | None:intergenic | 35.0% |
| ! | ATCATTGACAACTGATTCAG+TGG | + | chr4.1:56253301-56253320 | MS.gene63951:intron | 35.0% |
| ! | CATTGGCTGTTGTTTGATAT+GGG | - | chr4.1:56253443-56253462 | None:intergenic | 35.0% |
| ! | GTCTCACTTGTTGAAAATCT+TGG | - | chr4.1:56251499-56251518 | None:intergenic | 35.0% |
| ! | GTTTGAGATTATTGGTTGTG+TGG | + | chr4.1:56249072-56249091 | MS.gene63951:CDS | 35.0% |
| ! | TCATTGGCTGTTGTTTGATA+TGG | - | chr4.1:56253444-56253463 | None:intergenic | 35.0% |
| ! | TCTGATGACTTTCTTTTTCC+AGG | + | chr4.1:56252802-56252821 | MS.gene63951:intron | 35.0% |
| ! | TTCTTTTGGATTCAAGTCTG+TGG | + | chr4.1:56251776-56251795 | MS.gene63951:CDS | 35.0% |
| ! | TTTTACAGACTTCGAGTCAT+AGG | - | chr4.1:56250133-56250152 | None:intergenic | 35.0% |
| !! | GACCCCTATTTCTATTAACA+GGG | + | chr4.1:56249446-56249465 | MS.gene63951:intron | 35.0% |
| !! | TGACCCCTATTTCTATTAAC+AGG | + | chr4.1:56249445-56249464 | MS.gene63951:intron | 35.0% |
| !! | TGTTACCCTTTTGTTTCTCT+TGG | + | chr4.1:56251895-56251914 | MS.gene63951:intron | 35.0% |
| !! | TTTTGCGGGTTTGAGATTAT+TGG | + | chr4.1:56249064-56249083 | MS.gene63951:CDS | 35.0% |
| AAAACGGATCACAACATGCT+TGG | - | chr4.1:56253221-56253240 | None:intergenic | 40.0% | |
| AAAGATACAGCACCAGAAAG+AGG | - | chr4.1:56251387-56251406 | None:intergenic | 40.0% | |
| AACGACGAACCAGTAAAATG+AGG | - | chr4.1:56250756-56250775 | None:intergenic | 40.0% | |
| AAGATCAGACAGCTCACATT+CGG | - | chr4.1:56253484-56253503 | None:intergenic | 40.0% | |
| AAGTTAGTATGACCTACCAC+GGG | - | chr4.1:56251685-56251704 | None:intergenic | 40.0% | |
| ACATCTAAAGGTGGTCACTT+GGG | + | chr4.1:56253806-56253825 | MS.gene63951:CDS | 40.0% | |
| ACATGCAACAATTCACAGAG+TGG | - | chr4.1:56250223-56250242 | None:intergenic | 40.0% | |
| ACGCCGTATAAATTAGCATC+GGG | - | chr4.1:56251303-56251322 | None:intergenic | 40.0% | |
| AGAGGTAAGAAGAAATGGTG+TGG | - | chr4.1:56250347-56250366 | None:intergenic | 40.0% | |
| AGCAGTAACAACTTACAAGC+TGG | - | chr4.1:56252627-56252646 | None:intergenic | 40.0% | |
| AGTATTTCGAAGGATGGATG+AGG | - | chr4.1:56250502-56250521 | None:intergenic | 40.0% | |
| AGTGGGTCAAATGTTAGACT+TGG | - | chr4.1:56250205-56250224 | None:intergenic | 40.0% | |
| ATAGAACTGCACAAGCACAA+CGG | - | chr4.1:56251223-56251242 | None:intergenic | 40.0% | |
| ATCAAAGTCCCTAACAGACT+TGG | - | chr4.1:56251652-56251671 | None:intergenic | 40.0% | |
| ATGATTGGACCAAGGGTTAA+AGG | - | chr4.1:56253685-56253704 | None:intergenic | 40.0% | |
| ATGCGATCTATACAAGGTTC+AGG | - | chr4.1:56248987-56249006 | None:intergenic | 40.0% | |
| ATGTACCAATGACACTCTTC+AGG | + | chr4.1:56253261-56253280 | MS.gene63951:intron | 40.0% | |
| ATGTCCAACACACACACTTT+AGG | - | chr4.1:56252430-56252449 | None:intergenic | 40.0% | |
| ATTAGCTGACACCACTTAGT+GGG | - | chr4.1:56252715-56252734 | None:intergenic | 40.0% | |
| CAAGTTAGTATGACCTACCA+CGG | - | chr4.1:56251686-56251705 | None:intergenic | 40.0% | |
| CATACCTTGATATCTTCACG+AGG | - | chr4.1:56252863-56252882 | None:intergenic | 40.0% | |
| CATCCATCCTTCGAAATACT+CGG | + | chr4.1:56250502-56250521 | MS.gene63951:CDS | 40.0% | |
| CATGCAACAATTCACAGAGT+GGG | - | chr4.1:56250222-56250241 | None:intergenic | 40.0% | |
| CGGTCCCTGTTAATAGAAAT+AGG | - | chr4.1:56249453-56249472 | None:intergenic | 40.0% | |
| CGTCCAAGTAACAATGTCTA+CGG | + | chr4.1:56250459-56250478 | MS.gene63951:CDS | 40.0% | |
| CTAACCAGTTCCAGAGATTA+AGG | - | chr4.1:56252655-56252674 | None:intergenic | 40.0% | |
| CTCGAAGTCTGTAAAAGTGA+TGG | + | chr4.1:56250137-56250156 | MS.gene63951:intron | 40.0% | |
| CTTCTGTCTCCAGATATTGA+AGG | - | chr4.1:56253895-56253914 | None:intergenic | 40.0% | |
| GATGCTAATTTATACGGCGT+TGG | + | chr4.1:56251303-56251322 | MS.gene63951:CDS | 40.0% | |
| GATGGTAAACTGTGATTCCT+TGG | + | chr4.1:56250155-56250174 | MS.gene63951:intron | 40.0% | |
| GATTCCTAAAGTGTGTGTGT+TGG | + | chr4.1:56252323-56252342 | MS.gene63951:intron | 40.0% | |
| GGAGAGGAAGAAGAATGAAT+TGG | + | chr4.1:56249213-56249232 | MS.gene63951:intron | 40.0% | |
| GTCACTACTAACAAGCAGTT+TGG | - | chr4.1:56253788-56253807 | None:intergenic | 40.0% | |
| GTGGGTCAAATGTTAGACTT+GGG | - | chr4.1:56250204-56250223 | None:intergenic | 40.0% | |
| GTTGTTGTGTTCAATAGTCG+TGG | + | chr4.1:56251097-56251116 | MS.gene63951:CDS | 40.0% | |
| TATTAGCTGACACCACTTAG+TGG | - | chr4.1:56252716-56252735 | None:intergenic | 40.0% | |
| TCTGTTAGGGACTTTGATGA+TGG | + | chr4.1:56251654-56251673 | MS.gene63951:CDS | 40.0% | |
| TGTCCGTAGACATTGTTACT+TGG | - | chr4.1:56250465-56250484 | None:intergenic | 40.0% | |
| ! | CAGCTAATAGCCTTAATCTC+TGG | + | chr4.1:56252727-56252746 | MS.gene63951:intron | 40.0% |
| ! | CGTAGACATTGTTACTTGGA+CGG | - | chr4.1:56250461-56250480 | None:intergenic | 40.0% |
| ! | CTGCTAATAGCCTTAATCTC+TGG | + | chr4.1:56252642-56252661 | MS.gene63951:intron | 40.0% |
| ! | TGAGGCTTTGCAGTTTCTTT+TGG | + | chr4.1:56251762-56251781 | MS.gene63951:intron | 40.0% |
| !! | ATAGCCTTAATCTCTGGAAC+TGG | + | chr4.1:56252648-56252667 | MS.gene63951:intron | 40.0% |
| !! | CTAATTTATACGGCGTTGGT+TGG | + | chr4.1:56251307-56251326 | MS.gene63951:CDS | 40.0% |
| !! | TCCTTGGTTTGGAATGCAAT+CGG | + | chr4.1:56250171-56250190 | MS.gene63951:intron | 40.0% |
| !! | TGATTTGGTTGTGTCAGATG+CGG | + | chr4.1:56251419-56251438 | MS.gene63951:CDS | 40.0% |
| ACCAAGGGTTAAAGGAGTTG+GGG | - | chr4.1:56253677-56253696 | None:intergenic | 45.0% | |
| ACCAAGTAATAGCATGTGGG+TGG | + | chr4.1:56250283-56250302 | MS.gene63951:intron | 45.0% | |
| ACCAATGACACTCTTCAGGT+TGG | + | chr4.1:56253265-56253284 | MS.gene63951:intron | 45.0% | |
| ACCGATTGCATTCCAAACCA+AGG | - | chr4.1:56250175-56250194 | None:intergenic | 45.0% | |
| ATCTCACAATTAGGAGTGGC+AGG | - | chr4.1:56252212-56252231 | None:intergenic | 45.0% | |
| ATGAAGGGGAAAGGGTTGTA+GGG | - | chr4.1:56250574-56250593 | None:intergenic | 45.0% | |
| ATGACCAAAGGATCAGTCCA+AGG | - | chr4.1:56253866-56253885 | None:intergenic | 45.0% | |
| ATGATCCGATTGCTCCTTCT+AGG | + | chr4.1:56252831-56252850 | MS.gene63951:CDS | 45.0% | |
| ATGGATGAGGTTGTTGGATG+AGG | - | chr4.1:56250489-56250508 | None:intergenic | 45.0% | |
| ATTCCCCTAGAAGGAGCAAT+CGG | - | chr4.1:56252839-56252858 | None:intergenic | 45.0% | |
| ATTGGTTGTGTGGAGCTTGA+CGG | + | chr4.1:56249082-56249101 | MS.gene63951:CDS | 45.0% | |
| ATTTCACAATCAGGAGTGGC+AGG | + | chr4.1:56252262-56252281 | MS.gene63951:intron | 45.0% | |
| CATCTAAAGGTGGTCACTTG+GGG | + | chr4.1:56253807-56253826 | MS.gene63951:CDS | 45.0% | |
| CCAAGTAATAGCATGTGGGT+GGG | + | chr4.1:56250284-56250303 | MS.gene63951:intron | 45.0% | |
| CGAACCAGTAAAATGAGGAG+TGG | - | chr4.1:56250751-56250770 | None:intergenic | 45.0% | |
| CGCCGTATAAATTAGCATCG+GGG | - | chr4.1:56251302-56251321 | None:intergenic | 45.0% | |
| CTAACCAGTGCCAGAGATTA+AGG | - | chr4.1:56252740-56252759 | None:intergenic | 45.0% | |
| CTTCTTCTTGTATGGGAGAG+AGG | - | chr4.1:56250365-56250384 | None:intergenic | 45.0% | |
| GAAAATCTTGGAGAGAGCTG+AGG | - | chr4.1:56251487-56251506 | None:intergenic | 45.0% | |
| GAAGAACCTACATGGGACAA+TGG | + | chr4.1:56248951-56248970 | MS.gene63951:CDS | 45.0% | |
| GACATCTAAAGGTGGTCACT+TGG | + | chr4.1:56253805-56253824 | MS.gene63951:CDS | 45.0% | |
| GACCAAGGGTTAAAGGAGTT+GGG | - | chr4.1:56253678-56253697 | None:intergenic | 45.0% | |
| GAGTTAGAGATGGGAGGAAA+CGG | - | chr4.1:56250540-56250559 | None:intergenic | 45.0% | |
| GCTGCAAGTTTGTGAAGCTT+TGG | - | chr4.1:56253921-56253940 | None:intergenic | 45.0% | |
| GGGAGAGAGGTAAGAAGAAA+TGG | - | chr4.1:56250352-56250371 | None:intergenic | 45.0% | |
| GTGTCACGTGAGTTAGAGAT+GGG | - | chr4.1:56250549-56250568 | None:intergenic | 45.0% | |
| TAGTAGCTAGAGTTGCGAAG+TGG | - | chr4.1:56250953-56250972 | None:intergenic | 45.0% | |
| TATATGCAGCCAGGCTTAAC+TGG | + | chr4.1:56251013-56251032 | MS.gene63951:intron | 45.0% | |
| TCACAAACTTGCAGCAATCC+TGG | + | chr4.1:56253926-56253945 | MS.gene63951:CDS | 45.0% | |
| TCACACAACTGTCCTCTTTC+TGG | + | chr4.1:56251372-56251391 | MS.gene63951:CDS | 45.0% | |
| TCACCTGAGGAGTAGTAACA+GGG | - | chr4.1:56251135-56251154 | None:intergenic | 45.0% | |
| TCCAAGTGATGAAGGGGAAA+GGG | - | chr4.1:56250582-56250601 | None:intergenic | 45.0% | |
| TCGGAAAAAGGAAGCGAAGA+TGG | - | chr4.1:56250620-56250639 | None:intergenic | 45.0% | |
| TCTTGTTCGTTACTTGGGTC+AGG | + | chr4.1:56251347-56251366 | MS.gene63951:intron | 45.0% | |
| TGACCAAAGGATCAGTCCAA+GGG | - | chr4.1:56253865-56253884 | None:intergenic | 45.0% | |
| TGATCCGATTGCTCCTTCTA+GGG | + | chr4.1:56252832-56252851 | MS.gene63951:CDS | 45.0% | |
| TGGGTTGTACTTGTAGGGAA+TGG | + | chr4.1:56250303-56250322 | MS.gene63951:intron | 45.0% | |
| TTCACCTGAGGAGTAGTAAC+AGG | - | chr4.1:56251136-56251155 | None:intergenic | 45.0% | |
| TTCCAAGTGATGAAGGGGAA+AGG | - | chr4.1:56250583-56250602 | None:intergenic | 45.0% | |
| ! | ATAGCCTTAATCTCTGGCAC+TGG | + | chr4.1:56252733-56252752 | MS.gene63951:intron | 45.0% |
| ! | GAAGTACCATTGTCCCATGT+AGG | - | chr4.1:56248960-56248979 | None:intergenic | 45.0% |
| ! | GGGGTATCTATCAGAGACAT+GGG | - | chr4.1:56251283-56251302 | None:intergenic | 45.0% |
| ! | TAAGGGGTGTGAATTGTGGT+GGG | + | chr4.1:56249156-56249175 | MS.gene63951:intron | 45.0% |
| ! | TTAAGGGGTGTGAATTGTGG+TGG | + | chr4.1:56249155-56249174 | MS.gene63951:intron | 45.0% |
| !! | ACCAACCTGAAGAGTGTCAT+TGG | - | chr4.1:56253269-56253288 | None:intergenic | 45.0% |
| !! | GAATGTATGAAGCATTGGCG+TGG | + | chr4.1:56249021-56249040 | MS.gene63951:CDS | 45.0% |
| AAGCGAAGATGGTTTCGACG+TGG | - | chr4.1:56250609-56250628 | None:intergenic | 50.0% | |
| ACCCTTTCCCCTTCATCACT+TGG | + | chr4.1:56250578-56250597 | MS.gene63951:CDS | 50.0% | |
| AGACTAACCCTGGGGATGAT+TGG | - | chr4.1:56253700-56253719 | None:intergenic | 50.0% | |
| ATCCGCCATCTTGAGTTCTG+AGG | - | chr4.1:56250675-56250694 | None:intergenic | 50.0% | |
| CACTGCCTCAGAACTCAAGA+TGG | + | chr4.1:56250667-56250686 | MS.gene63951:CDS | 50.0% | |
| CCATCCTTCGAAATACTCGG+AGG | + | chr4.1:56250505-56250524 | MS.gene63951:CDS | 50.0% | |
| CCCACCCACATGCTATTACT+TGG | - | chr4.1:56250287-56250306 | None:intergenic | 50.0% | |
| CCTCCGAGTATTTCGAAGGA+TGG | - | chr4.1:56250508-56250527 | None:intergenic | 50.0% | |
| CGAAGGATGGATGAGGTTGT+TGG | - | chr4.1:56250495-56250514 | None:intergenic | 50.0% | |
| CGCCAATGCCAAGTCTGTTA+GGG | + | chr4.1:56251641-56251660 | MS.gene63951:CDS | 50.0% | |
| CGTGTCACGTGAGTTAGAGA+TGG | - | chr4.1:56250550-56250569 | None:intergenic | 50.0% | |
| GACCAAAGGATCAGTCCAAG+GGG | - | chr4.1:56253864-56253883 | None:intergenic | 50.0% | |
| GATCCGATTGCTCCTTCTAG+GGG | + | chr4.1:56252833-56252852 | MS.gene63951:CDS | 50.0% | |
| GATGAAGGGGAAAGGGTTGT+AGG | - | chr4.1:56250575-56250594 | None:intergenic | 50.0% | |
| GGACCAAGGGTTAAAGGAGT+TGG | - | chr4.1:56253679-56253698 | None:intergenic | 50.0% | |
| GGTGGTGAAACGTGAGGAAA+GGG | + | chr4.1:56249192-56249211 | MS.gene63951:intron | 50.0% | |
| GTAGGGAATGGCAACAGCAA+GGG | + | chr4.1:56250315-56250334 | MS.gene63951:intron | 50.0% | |
| GTCCCTAACAGACTTGGCAT+TGG | - | chr4.1:56251646-56251665 | None:intergenic | 50.0% | |
| GTGTTCAATAGTCGTGGCTG+TGG | + | chr4.1:56251103-56251122 | MS.gene63951:CDS | 50.0% | |
| TAAAGGTGGTCACTTGGGGT+GGG | + | chr4.1:56253811-56253830 | MS.gene63951:CDS | 50.0% | |
| TAGCCCTGTTACTACTCCTC+AGG | + | chr4.1:56251129-56251148 | MS.gene63951:CDS | 50.0% | |
| TCACGAGGAATTCCCCTAGA+AGG | - | chr4.1:56252848-56252867 | None:intergenic | 50.0% | |
| TCACGTGAGTTAGAGATGGG+AGG | - | chr4.1:56250546-56250565 | None:intergenic | 50.0% | |
| TCAGATGCGGACTTCCGAAA+AGG | + | chr4.1:56251432-56251451 | MS.gene63951:CDS | 50.0% | |
| TCCCCAACTCCTTTAACCCT+TGG | + | chr4.1:56253673-56253692 | MS.gene63951:intron | 50.0% | |
| TCGCCAATGCCAAGTCTGTT+AGG | + | chr4.1:56251640-56251659 | MS.gene63951:CDS | 50.0% | |
| TCTACCTGGATGCACAGCAA+AGG | - | chr4.1:56251855-56251874 | None:intergenic | 50.0% | |
| TGAAACGTGAGGAAAGGGAG+AGG | + | chr4.1:56249197-56249216 | MS.gene63951:intron | 50.0% | |
| TGAAGGGGAAAGGGTTGTAG+GGG | - | chr4.1:56250573-56250592 | None:intergenic | 50.0% | |
| TGACACCACTTAGTGGGACT+AGG | - | chr4.1:56252709-56252728 | None:intergenic | 50.0% | |
| TGCCTCAGAACTCAAGATGG+CGG | + | chr4.1:56250670-56250689 | MS.gene63951:CDS | 50.0% | |
| TGGCGGTTCCAAGTGATGAA+GGG | - | chr4.1:56250589-56250608 | None:intergenic | 50.0% | |
| TGTAGGGAATGGCAACAGCA+AGG | + | chr4.1:56250314-56250333 | MS.gene63951:intron | 50.0% | |
| TTCAATAGTCGTGGCTGTGG+AGG | + | chr4.1:56251106-56251125 | MS.gene63951:CDS | 50.0% | |
| TTGTTCCGGTGAGCTTAGCT+CGG | + | chr4.1:56250813-56250832 | MS.gene63951:intron | 50.0% | |
| ! | AAAATGAGGAGTGGAGCGTC+AGG | - | chr4.1:56250742-56250761 | None:intergenic | 50.0% |
| ! | AACACCTTTGCTGTGCATCC+AGG | + | chr4.1:56251848-56251867 | MS.gene63951:CDS | 50.0% |
| ! | CGCTCCACTCCTCATTTTAC+TGG | + | chr4.1:56250744-56250763 | MS.gene63951:CDS | 50.0% |
| ! | CGGGGTATCTATCAGAGACA+TGG | - | chr4.1:56251284-56251303 | None:intergenic | 50.0% |
| ! | GTGAGGGGTTGATCGGAAAA+AGG | - | chr4.1:56250632-56250651 | None:intergenic | 50.0% |
| !! | CTTGAGTTCTGAGGCAGTGA+CGG | - | chr4.1:56250666-56250685 | None:intergenic | 50.0% |
| !! | GTGGGTGGGTTGTACTTGTA+GGG | + | chr4.1:56250298-56250317 | MS.gene63951:intron | 50.0% |
| !! | TGAATTGTGGTGGGTGGTGA+TGG | + | chr4.1:56249165-56249184 | MS.gene63951:intron | 50.0% |
| !! | TGTGGGTGGGTTGTACTTGT+AGG | + | chr4.1:56250297-56250316 | MS.gene63951:intron | 50.0% |
| !! | TTTGATGATGGACTCACCCG+TGG | + | chr4.1:56251666-56251685 | MS.gene63951:CDS | 50.0% |
| !!! | TGGCGGATTGAGCTGTTTTG+CGG | + | chr4.1:56249049-56249068 | MS.gene63951:CDS | 50.0% |
| ACCAACCGAGCTAAGCTCAC+CGG | - | chr4.1:56250821-56250840 | None:intergenic | 55.0% | |
| AGCCCCTTGGACTGATCCTT+TGG | + | chr4.1:56253859-56253878 | MS.gene63951:CDS | 55.0% | |
| ATGCAGCCAGGCTTAACTGG+AGG | + | chr4.1:56251016-56251035 | MS.gene63951:intron | 55.0% | |
| CAAGGTCCGGGTTCAAACTG+CGG | + | chr4.1:56250862-56250881 | MS.gene63951:intron | 55.0% | |
| CAATCGGATCATTCGCTGCC+TGG | - | chr4.1:56252823-56252842 | None:intergenic | 55.0% | |
| CCAAGCCTAGTCCCACTAAG+TGG | + | chr4.1:56252701-56252720 | MS.gene63951:intron | 55.0% | |
| CCACTACCTCCAGTTAAGCC+TGG | - | chr4.1:56251025-56251044 | None:intergenic | 55.0% | |
| CCACTTAGTGGGACTAGGCT+TGG | - | chr4.1:56252704-56252723 | None:intergenic | 55.0% | |
| CCAGGCTTAACTGGAGGTAG+TGG | + | chr4.1:56251022-56251041 | MS.gene63951:CDS | 55.0% | |
| CCTGGGGATGATTGGACCAA+GGG | - | chr4.1:56253692-56253711 | None:intergenic | 55.0% | |
| CCTTGGTCCAATCATCCCCA+GGG | + | chr4.1:56253690-56253709 | MS.gene63951:intron | 55.0% | |
| CGAAGATGGTTTCGACGTGG+CGG | - | chr4.1:56250606-56250625 | None:intergenic | 55.0% | |
| CTAAAGGTGGTCACTTGGGG+TGG | + | chr4.1:56253810-56253829 | MS.gene63951:CDS | 55.0% | |
| GAGCTTGACGGTGAACCATG+TGG | + | chr4.1:56249094-56249113 | MS.gene63951:intron | 55.0% | |
| GGAATGGCAACAGCAAGGGT+GGG | + | chr4.1:56250319-56250338 | MS.gene63951:CDS | 55.0% | |
| GGCGGTTCCAAGTGATGAAG+GGG | - | chr4.1:56250588-56250607 | None:intergenic | 55.0% | |
| GGGTGGTGAAACGTGAGGAA+AGG | + | chr4.1:56249191-56249210 | MS.gene63951:intron | 55.0% | |
| GTGGCGGTTCCAAGTGATGA+AGG | - | chr4.1:56250590-56250609 | None:intergenic | 55.0% | |
| TGCGCCTCCGAGTATTTCGA+AGG | - | chr4.1:56250512-56250531 | None:intergenic | 55.0% | |
| !! | ATGATGGACTCACCCGTGGT+AGG | + | chr4.1:56251670-56251689 | MS.gene63951:intron | 55.0% |
| !! | GAAGCATTGGCGTGGCTTTG+TGG | + | chr4.1:56249029-56249048 | MS.gene63951:CDS | 55.0% |
| !! | TACGGCGTTGGTTGGTCACT+CGG | + | chr4.1:56251315-56251334 | MS.gene63951:CDS | 55.0% |
| !! | TGTGGTGGGTGGTGATGGTT+GGG | + | chr4.1:56249170-56249189 | MS.gene63951:intron | 55.0% |
| !! | TTGTGGTGGGTGGTGATGGT+TGG | + | chr4.1:56249169-56249188 | MS.gene63951:intron | 55.0% |
| !!! | GGCGGATTGAGCTGTTTTGC+GGG | + | chr4.1:56249050-56249069 | MS.gene63951:CDS | 55.0% |
| AAGCTCCACTTGGAGCCCCT+TGG | + | chr4.1:56253846-56253865 | MS.gene63951:CDS | 60.0% | |
| AGGCAAGCGACGGTCATCAC+CGG | - | chr4.1:56250719-56250738 | None:intergenic | 60.0% | |
| CCCTGGGGATGATTGGACCA+AGG | - | chr4.1:56253693-56253712 | None:intergenic | 60.0% | |
| CCCTTGGTCCAATCATCCCC+AGG | + | chr4.1:56253689-56253708 | MS.gene63951:intron | 60.0% | |
| CGGATCAGTCGCTCTCGACT+GGG | + | chr4.1:56250690-56250709 | MS.gene63951:CDS | 60.0% | |
| GGGAATGGCAACAGCAAGGG+TGG | + | chr4.1:56250318-56250337 | MS.gene63951:intron | 60.0% | |
| GGTTGGGGTGGTGAAACGTG+AGG | + | chr4.1:56249186-56249205 | MS.gene63951:intron | 60.0% | |
| GTCGCTCTCGACTGGGTTTC+CGG | + | chr4.1:56250697-56250716 | MS.gene63951:CDS | 60.0% | |
| TCAGTCCAAGGGGCTCCAAG+TGG | - | chr4.1:56253854-56253873 | None:intergenic | 60.0% | |
| TCCGGTGAGCTTAGCTCGGT+TGG | + | chr4.1:56250817-56250836 | MS.gene63951:intron | 60.0% | |
| ! | ATGAGGAGTGGAGCGTCAGG+AGG | - | chr4.1:56250739-56250758 | None:intergenic | 60.0% |
| ! | GCTGGTGACGAAGCTCCACT+TGG | + | chr4.1:56253836-56253855 | MS.gene63951:CDS | 60.0% |
| ! | GGGGTGTGAATTGTGGTGGG+TGG | + | chr4.1:56249159-56249178 | MS.gene63951:intron | 60.0% |
| ! | GGGTGACGTGAGGGGTTGAT+CGG | - | chr4.1:56250639-56250658 | None:intergenic | 60.0% |
| !! | GACTTGGCATTGGCGACCAG+TGG | - | chr4.1:56251636-56251655 | None:intergenic | 60.0% |
| !! | GAGTTCTGAGGCAGTGACGG+CGG | - | chr4.1:56250663-56250682 | None:intergenic | 60.0% |
| !! | GCATTGGCGTGGCTTTGTGG+CGG | + | chr4.1:56249032-56249051 | MS.gene63951:CDS | 60.0% |
| !! | GTGGTGGGTGGTGATGGTTG+GGG | + | chr4.1:56249171-56249190 | MS.gene63951:intron | 60.0% |
| GAGCGTCAGGAGGCAAGCGA+CGG | - | chr4.1:56250729-56250748 | None:intergenic | 65.0% | |
| GCGGATCAGTCGCTCTCGAC+TGG | + | chr4.1:56250689-56250708 | MS.gene63951:CDS | 65.0% | |
| TGGCGGCCGCAGTTTGAACC+CGG | - | chr4.1:56250871-56250890 | None:intergenic | 65.0% | |
| ! | TCTGAGGCAGTGACGGCGGA+GGG | - | chr4.1:56250659-56250678 | None:intergenic | 65.0% |
| !! | GGTCACTTGGGGTGGGTTGC+TGG | + | chr4.1:56253818-56253837 | MS.gene63951:CDS | 65.0% |
| !! | GTGGGTGGTGATGGTTGGGG+TGG | + | chr4.1:56249174-56249193 | MS.gene63951:intron | 65.0% |
| !! | TTCTGAGGCAGTGACGGCGG+AGG | - | chr4.1:56250660-56250679 | None:intergenic | 65.0% |
| ACGGCGGAGGGTGACGTGAG+GGG | - | chr4.1:56250647-56250666 | None:intergenic | 70.0% | |
| GACGGCGGAGGGTGACGTGA+GGG | - | chr4.1:56250648-56250667 | None:intergenic | 70.0% | |
| TGACGGCGGAGGGTGACGTG+AGG | - | chr4.1:56250649-56250668 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 56248945 | 56253985 | 56248945 | ID=MS.gene63951 |
| chr4.1 | mRNA | 56248945 | 56253985 | 56248945 | ID=MS.gene63951.t1;Parent=MS.gene63951 |
| chr4.1 | exon | 56248945 | 56249103 | 56248945 | ID=MS.gene63951.t1.exon1;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56248945 | 56249103 | 56248945 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56250319 | 56250765 | 56250319 | ID=MS.gene63951.t1.exon2;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56250319 | 56250765 | 56250319 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56251022 | 56251150 | 56251022 | ID=MS.gene63951.t1.exon3;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56251022 | 56251150 | 56251022 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56251237 | 56251338 | 56251237 | ID=MS.gene63951.t1.exon4;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56251237 | 56251338 | 56251237 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56251369 | 56251511 | 56251369 | ID=MS.gene63951.t1.exon5;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56251369 | 56251511 | 56251369 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56251590 | 56251687 | 56251590 | ID=MS.gene63951.t1.exon6;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56251590 | 56251687 | 56251590 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56251775 | 56251869 | 56251775 | ID=MS.gene63951.t1.exon7;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56251775 | 56251869 | 56251775 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56252824 | 56252877 | 56252824 | ID=MS.gene63951.t1.exon8;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56252824 | 56252877 | 56252824 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| chr4.1 | exon | 56253779 | 56253985 | 56253779 | ID=MS.gene63951.t1.exon9;Parent=MS.gene63951.t1 |
| chr4.1 | CDS | 56253779 | 56253985 | 56253779 | ID=cds.MS.gene63951.t1;Parent=MS.gene63951.t1 |
| Gene Sequence |
| Protein sequence |
