Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94987.t1 | XP_013467168.1 | 96.6 | 321 | 10 | 1 | 4 | 323 | 422 | 742 | 5.50E-169 | 603.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94987.t1 | Q55680 | 36.2 | 243 | 116 | 5 | 12 | 254 | 355 | 558 | 1.0e-38 | 162.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94987.t1 | A0A072VGN0 | 96.6 | 321 | 10 | 1 | 4 | 323 | 422 | 742 | 4.0e-169 | 603.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene94987 | 0.901567 | 2.35E-78 | -1.69E-46 |
| MS.gene049173 | MS.gene94987 | 0.844266 | 8.41E-59 | -1.69E-46 |
| MS.gene049181 | MS.gene94987 | -0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene94987 | 0.820335 | 7.24E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene94987 | 0.884636 | 1.62E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene94987 | 0.884139 | 2.48E-71 | -1.69E-46 |
| MS.gene049285 | MS.gene94987 | 0.898327 | 5.91E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene94987 | 0.889344 | 2.64E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene94987 | 0.838954 | 2.12E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene94987 | 0.893649 | 5.16E-75 | -1.69E-46 |
| MS.gene049865 | MS.gene94987 | 0.830943 | 2.21E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene94987 | 0.879742 | 9.72E-70 | -1.69E-46 |
| MS.gene050163 | MS.gene94987 | 0.858854 | 6.19E-63 | -1.69E-46 |
| MS.gene050165 | MS.gene94987 | 0.874868 | 4.82E-68 | -1.69E-46 |
| MS.gene050170 | MS.gene94987 | 0.898446 | 5.26E-77 | -1.69E-46 |
| MS.gene050216 | MS.gene94987 | 0.840356 | 9.14E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene94987 | 0.907527 | 4.60E-81 | -1.69E-46 |
| MS.gene050333 | MS.gene94987 | 0.862098 | 6.44E-64 | -1.69E-46 |
| MS.gene050338 | MS.gene94987 | -0.826887 | 2.12E-54 | -1.69E-46 |
| MS.gene050444 | MS.gene94987 | 0.822629 | 2.14E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene94987 | 0.914229 | 2.45E-84 | -1.69E-46 |
| MS.gene050504 | MS.gene94987 | 0.902262 | 1.16E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene94987 | 0.897908 | 8.90E-77 | -1.69E-46 |
| MS.gene050577 | MS.gene94987 | 0.865592 | 5.28E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene94987 | 0.911897 | 3.61E-83 | -1.69E-46 |
| MS.gene050662 | MS.gene94987 | 0.818905 | 1.54E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene94987 | 0.886579 | 3.03E-72 | -1.69E-46 |
| MS.gene050697 | MS.gene94987 | 0.804715 | 1.89E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene94987 | 0.869131 | 3.90E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene94987 | 0.830754 | 2.46E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene94987 | 0.870306 | 1.61E-66 | -1.69E-46 |
| MS.gene05080 | MS.gene94987 | 0.897319 | 1.58E-76 | -1.69E-46 |
| MS.gene050868 | MS.gene94987 | 0.894702 | 1.92E-75 | -1.69E-46 |
| MS.gene050871 | MS.gene94987 | 0.892206 | 1.97E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene94987 | 0.89331 | 7.08E-75 | -1.69E-46 |
| MS.gene050904 | MS.gene94987 | 0.893872 | 4.19E-75 | -1.69E-46 |
| MS.gene050950 | MS.gene94987 | 0.828616 | 8.14E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene94987 | 0.885615 | 6.98E-72 | -1.69E-46 |
| MS.gene05100 | MS.gene94987 | 0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene94987 | -0.804088 | 2.55E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene94987 | -0.813999 | 1.93E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene94987 | 0.87422 | 8.01E-68 | -1.69E-46 |
| MS.gene051317 | MS.gene94987 | 0.86699 | 1.90E-65 | -1.69E-46 |
| MS.gene051364 | MS.gene94987 | -0.802196 | 6.29E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene94987 | -0.802898 | 4.51E-49 | -1.69E-46 |
| MS.gene051551 | MS.gene94987 | 0.835566 | 1.56E-56 | -1.69E-46 |
| MS.gene051651 | MS.gene94987 | -0.827968 | 1.17E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene94987 | 0.850526 | 1.60E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene94987 | 0.821151 | 4.70E-53 | -1.69E-46 |
| MS.gene051874 | MS.gene94987 | 0.83272 | 8.05E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene94987 | 0.84814 | 7.41E-60 | -1.69E-46 |
| MS.gene052066 | MS.gene94987 | 0.829958 | 3.85E-55 | -1.69E-46 |
| MS.gene052129 | MS.gene94987 | -0.806751 | 7.06E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene94987 | 0.876499 | 1.33E-68 | -1.69E-46 |
| MS.gene052482 | MS.gene94987 | 0.87071 | 1.19E-66 | -1.69E-46 |
| MS.gene052486 | MS.gene94987 | 0.870154 | 1.81E-66 | -1.69E-46 |
| MS.gene052503 | MS.gene94987 | 0.82534 | 4.94E-54 | -1.69E-46 |
| MS.gene052504 | MS.gene94987 | 0.819801 | 9.59E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene94987 | 0.849721 | 2.70E-60 | -1.69E-46 |
| MS.gene052566 | MS.gene94987 | -0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene94987 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene94987 | 0.870424 | 1.47E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene94987 | 0.821765 | 3.39E-53 | -1.69E-46 |
| MS.gene052825 | MS.gene94987 | 0.81505 | 1.13E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene94987 | 0.812096 | 5.03E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene94987 | 0.832848 | 7.48E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene94987 | 0.84321 | 1.61E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene94987 | 0.87535 | 3.30E-68 | -1.69E-46 |
| MS.gene053203 | MS.gene94987 | 0.859754 | 3.32E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene94987 | 0.840808 | 6.96E-58 | -1.69E-46 |
| MS.gene053284 | MS.gene94987 | 0.812972 | 3.24E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene94987 | 0.844912 | 5.63E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene94987 | -0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene94987 | 0.833846 | 4.22E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene94987 | 0.807026 | 6.18E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene94987 | 0.86161 | 9.09E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene94987 | 0.838312 | 3.10E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene94987 | 0.825578 | 4.34E-54 | -1.69E-46 |
| MS.gene053633 | MS.gene94987 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene94987 | 0.879935 | 8.30E-70 | -1.69E-46 |
| MS.gene053916 | MS.gene94987 | 0.85608 | 4.10E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene94987 | 0.80759 | 4.69E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene94987 | -0.807553 | 4.78E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene94987 | 0.80562 | 1.22E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene94987 | 0.831739 | 1.41E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene94987 | 0.852455 | 4.57E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene94987 | 0.876049 | 1.90E-68 | -1.69E-46 |
| MS.gene054706 | MS.gene94987 | -0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene05470 | MS.gene94987 | 0.880464 | 5.37E-70 | -1.69E-46 |
| MS.gene05494 | MS.gene94987 | 0.809614 | 1.73E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene94987 | 0.915674 | 4.44E-85 | -1.69E-46 |
| MS.gene055134 | MS.gene94987 | -0.831661 | 1.47E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene94987 | 0.831856 | 1.32E-55 | -1.69E-46 |
| MS.gene055251 | MS.gene94987 | -0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene94987 | 0.883439 | 4.48E-71 | -1.69E-46 |
| MS.gene055502 | MS.gene94987 | 0.882292 | 1.18E-70 | -1.69E-46 |
| MS.gene055577 | MS.gene94987 | 0.899321 | 2.22E-77 | -1.69E-46 |
| MS.gene055634 | MS.gene94987 | 0.815195 | 1.05E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene94987 | 0.84167 | 4.13E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene94987 | 0.905995 | 2.38E-80 | -1.69E-46 |
| MS.gene055750 | MS.gene94987 | 0.905953 | 2.49E-80 | -1.69E-46 |
| MS.gene055751 | MS.gene94987 | 0.923894 | 1.45E-89 | -1.69E-46 |
| MS.gene055776 | MS.gene94987 | 0.91858 | 1.31E-86 | -1.69E-46 |
| MS.gene055849 | MS.gene94987 | 0.894275 | 2.87E-75 | -1.69E-46 |
| MS.gene05589 | MS.gene94987 | 0.907236 | 6.30E-81 | -1.69E-46 |
| MS.gene055941 | MS.gene94987 | 0.835738 | 1.41E-56 | -1.69E-46 |
| MS.gene055942 | MS.gene94987 | -0.855085 | 7.99E-62 | -1.69E-46 |
| MS.gene056046 | MS.gene94987 | 0.85744 | 1.63E-62 | -1.69E-46 |
| MS.gene056283 | MS.gene94987 | 0.833378 | 5.52E-56 | -1.69E-46 |
| MS.gene056354 | MS.gene94987 | -0.800569 | 1.36E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene94987 | 0.803858 | 2.85E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene94987 | 0.826031 | 3.39E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene94987 | 0.91879 | 1.01E-86 | -1.69E-46 |
| MS.gene056510 | MS.gene94987 | 0.914351 | 2.12E-84 | -1.69E-46 |
| MS.gene056610 | MS.gene94987 | 0.811194 | 7.91E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene94987 | 0.885975 | 5.11E-72 | -1.69E-46 |
| MS.gene056692 | MS.gene94987 | 0.857287 | 1.81E-62 | -1.69E-46 |
| MS.gene056878 | MS.gene94987 | 0.802384 | 5.76E-49 | -1.69E-46 |
| MS.gene056898 | MS.gene94987 | 0.809676 | 1.68E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene94987 | 0.846901 | 1.62E-59 | -1.69E-46 |
| MS.gene057331 | MS.gene94987 | 0.805565 | 1.26E-49 | -1.69E-46 |
| MS.gene05753 | MS.gene94987 | 0.815244 | 1.02E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene94987 | 0.80474 | 1.87E-49 | -1.69E-46 |
| MS.gene057687 | MS.gene94987 | 0.82755 | 1.47E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene94987 | 0.850127 | 2.08E-60 | -1.69E-46 |
| MS.gene057857 | MS.gene94987 | 0.825667 | 4.14E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene94987 | 0.845404 | 4.15E-59 | -1.69E-46 |
| MS.gene05787 | MS.gene94987 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene94987 | -0.809645 | 1.71E-50 | -1.69E-46 |
| MS.gene058334 | MS.gene94987 | -0.868778 | 5.07E-66 | -1.69E-46 |
| MS.gene058335 | MS.gene94987 | 0.802763 | 4.81E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene94987 | 0.841258 | 5.30E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene94987 | 0.858059 | 1.07E-62 | -1.69E-46 |
| MS.gene058382 | MS.gene94987 | -0.811906 | 5.54E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene94987 | 0.888564 | 5.28E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene94987 | 0.834146 | 3.55E-56 | -1.69E-46 |
| MS.gene058719 | MS.gene94987 | 0.81658 | 5.14E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene94987 | 0.848744 | 5.04E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene94987 | 0.893548 | 5.67E-75 | -1.69E-46 |
| MS.gene058774 | MS.gene94987 | 0.800717 | 1.26E-48 | -1.69E-46 |
| MS.gene058838 | MS.gene94987 | 0.859827 | 3.16E-63 | -1.69E-46 |
| MS.gene059022 | MS.gene94987 | 0.902939 | 5.80E-79 | -1.69E-46 |
| MS.gene059023 | MS.gene94987 | 0.88344 | 4.48E-71 | -1.69E-46 |
| MS.gene059029 | MS.gene94987 | 0.81655 | 5.22E-52 | -1.69E-46 |
| MS.gene059079 | MS.gene94987 | 0.827813 | 1.27E-54 | -1.69E-46 |
| MS.gene05912 | MS.gene94987 | 0.82759 | 1.44E-54 | -1.69E-46 |
| MS.gene05913 | MS.gene94987 | 0.870008 | 2.02E-66 | -1.69E-46 |
| MS.gene059367 | MS.gene94987 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene94987 | 0.852165 | 5.52E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene94987 | 0.893549 | 5.67E-75 | -1.69E-46 |
| MS.gene059699 | MS.gene94987 | -0.817985 | 2.48E-52 | -1.69E-46 |
| MS.gene059701 | MS.gene94987 | -0.833698 | 4.59E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene94987 | -0.830131 | 3.49E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene94987 | 0.869733 | 2.48E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene94987 | 0.825824 | 3.80E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene94987 | 0.825849 | 3.75E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene94987 | 0.885036 | 1.15E-71 | -1.69E-46 |
| MS.gene059865 | MS.gene94987 | 0.930118 | 2.61E-93 | -1.69E-46 |
| MS.gene06000 | MS.gene94987 | 0.865281 | 6.61E-65 | -1.69E-46 |
| MS.gene060076 | MS.gene94987 | -0.80933 | 2.00E-50 | -1.69E-46 |
| MS.gene06027 | MS.gene94987 | 0.826786 | 2.24E-54 | -1.69E-46 |
| MS.gene060337 | MS.gene94987 | -0.803113 | 4.07E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene94987 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene060526 | MS.gene94987 | 0.832573 | 8.75E-56 | -1.69E-46 |
| MS.gene060595 | MS.gene94987 | -0.851907 | 6.53E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene94987 | 0.906459 | 1.45E-80 | -1.69E-46 |
| MS.gene060762 | MS.gene94987 | 0.901553 | 2.38E-78 | -1.69E-46 |
| MS.gene060778 | MS.gene94987 | 0.876983 | 9.05E-69 | -1.69E-46 |
| MS.gene06077 | MS.gene94987 | 0.880343 | 5.94E-70 | -1.69E-46 |
| MS.gene060823 | MS.gene94987 | -0.819322 | 1.23E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene94987 | 0.812808 | 3.52E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene94987 | 0.821035 | 5.00E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene94987 | 0.926588 | 3.82E-91 | -1.69E-46 |
| MS.gene061044 | MS.gene94987 | -0.845116 | 4.96E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene94987 | 0.845536 | 3.82E-59 | -1.69E-46 |
| MS.gene061218 | MS.gene94987 | 0.818446 | 1.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94987.t1 | MTR_1g046620 | 97.179 | 319 | 8 | 1 | 4 | 321 | 422 | 740 | 0.0 | 622 |
| MS.gene94987.t1 | MTR_6g038750 | 32.797 | 311 | 164 | 9 | 3 | 312 | 362 | 628 | 2.13e-42 | 156 |
| MS.gene94987.t1 | MTR_0053s0030 | 28.896 | 308 | 172 | 8 | 5 | 289 | 376 | 659 | 2.12e-32 | 127 |
| MS.gene94987.t1 | MTR_4g026450 | 35.429 | 175 | 102 | 3 | 5 | 170 | 388 | 560 | 6.27e-32 | 126 |
| MS.gene94987.t1 | MTR_1g009860 | 36.047 | 172 | 101 | 3 | 12 | 183 | 384 | 546 | 4.18e-30 | 120 |
| MS.gene94987.t1 | MTR_1g009860 | 36.047 | 172 | 101 | 3 | 12 | 183 | 384 | 546 | 4.71e-30 | 120 |
| MS.gene94987.t1 | MTR_3g105760 | 29.572 | 257 | 164 | 4 | 3 | 258 | 372 | 612 | 1.31e-29 | 119 |
| MS.gene94987.t1 | MTR_0224s0030 | 23.226 | 155 | 119 | 0 | 12 | 166 | 79 | 233 | 5.35e-20 | 89.0 |
| MS.gene94987.t1 | MTR_1g095480 | 23.226 | 155 | 119 | 0 | 12 | 166 | 463 | 617 | 9.38e-19 | 87.8 |
| MS.gene94987.t1 | MTR_1g095480 | 24.306 | 144 | 109 | 0 | 12 | 155 | 463 | 606 | 5.06e-18 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94987.t1 | AT3G24190 | 81.388 | 317 | 57 | 2 | 4 | 318 | 430 | 746 | 0.0 | 523 |
| MS.gene94987.t1 | AT1G71810 | 33.333 | 240 | 130 | 5 | 12 | 251 | 363 | 572 | 1.18e-36 | 140 |
| MS.gene94987.t1 | AT1G79600 | 37.500 | 176 | 99 | 3 | 5 | 171 | 383 | 556 | 1.57e-33 | 131 |
| MS.gene94987.t1 | AT4G31390 | 35.465 | 172 | 102 | 3 | 12 | 183 | 221 | 383 | 1.07e-29 | 118 |
| MS.gene94987.t1 | AT4G31390 | 35.465 | 172 | 102 | 3 | 12 | 183 | 395 | 557 | 1.13e-29 | 119 |
| MS.gene94987.t1 | AT4G31390 | 35.465 | 172 | 102 | 3 | 12 | 183 | 420 | 582 | 1.27e-29 | 119 |
| MS.gene94987.t1 | AT5G24970 | 29.084 | 251 | 155 | 5 | 3 | 250 | 437 | 667 | 1.09e-28 | 117 |
| MS.gene94987.t1 | AT5G24970 | 29.084 | 251 | 155 | 5 | 3 | 250 | 395 | 625 | 1.11e-28 | 117 |
| MS.gene94987.t1 | AT5G24970 | 29.084 | 251 | 155 | 5 | 3 | 250 | 398 | 628 | 1.12e-28 | 117 |
| MS.gene94987.t1 | AT2G39190 | 28.571 | 154 | 110 | 0 | 12 | 165 | 465 | 618 | 2.30e-22 | 98.6 |
Find 97 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATACTTTGCCCTTATAATT+AGG | 0.089687 | 1.1:-29510075 | MS.gene94987:CDS |
| GCTTTACGTTACACTATATA+TGG | 0.194317 | 1.1:-29509325 | MS.gene94987:CDS |
| TCAAGAACTCCAGCACTTTC+TGG | 0.201641 | 1.1:+29508110 | None:intergenic |
| CCCCGATAGCCCTAATTATA+AGG | 0.235389 | 1.1:+29510065 | None:intergenic |
| ATCCTCTCCACCTCCACTTT+TGG | 0.254419 | 1.1:+29509231 | None:intergenic |
| ATACTTTGCCCTTATAATTA+GGG | 0.262467 | 1.1:-29510074 | MS.gene94987:CDS |
| AATTAGGGCTATCGGGGTTT+TGG | 0.280919 | 1.1:-29510059 | MS.gene94987:CDS |
| GTAGGTACCATACCGAAAAT+AGG | 0.294048 | 1.1:+29508205 | None:intergenic |
| AATTATACCTGTGCAATATA+TGG | 0.302271 | 1.1:+29509983 | None:intergenic |
| CCCTTATAATTAGGGCTATC+GGG | 0.332300 | 1.1:-29510066 | MS.gene94987:CDS |
| GGATCTAAATTGACTCCATC+TGG | 0.344181 | 1.1:+29510226 | None:intergenic |
| TTCTTAGCAGATTATCTTCT+CGG | 0.345784 | 1.1:-29507831 | MS.gene94987:intron |
| AACTTTATCCTCTTCAGTTA+TGG | 0.348424 | 1.1:+29508147 | None:intergenic |
| CTAATTATAAGGGCAAAGTA+TGG | 0.349214 | 1.1:+29510076 | None:intergenic |
| TTTAACGAAGTCTTTCACTA+TGG | 0.351984 | 1.1:+29510261 | None:intergenic |
| GTCTTTGACCAGGCTTTAGA+AGG | 0.356423 | 1.1:-29510181 | MS.gene94987:CDS |
| TTGACCGACGATCAAAAGTA+TGG | 0.371660 | 1.1:-29510328 | MS.gene94987:CDS |
| GCCCTTATAATTAGGGCTAT+CGG | 0.378622 | 1.1:-29510067 | MS.gene94987:CDS |
| CCGGTCAGAATATCTCTTGC+CGG | 0.382765 | 1.1:-29509170 | MS.gene94987:CDS |
| TACACTATATATGGGAAATC+TGG | 0.386187 | 1.1:-29509316 | MS.gene94987:CDS |
| ACGAAGTCTTTCACTATGGC+TGG | 0.396425 | 1.1:+29510265 | None:intergenic |
| TTTGCAAGCACTGGCAAGAT+AGG | 0.409252 | 1.1:+29510205 | None:intergenic |
| TTGGAAGGGATAGCTTTAGT+AGG | 0.425825 | 1.1:-29510040 | MS.gene94987:CDS |
| CCCCTCCACCTTCTAAAGCC+TGG | 0.432654 | 1.1:+29510173 | None:intergenic |
| AGCTTGGGCTTATTACTAAC+CGG | 0.433633 | 1.1:-29509189 | MS.gene94987:CDS |
| CCCGATAGCCCTAATTATAA+GGG | 0.441218 | 1.1:+29510066 | None:intergenic |
| GCCCGTGTTTCCACTGGCTG+CGG | 0.444691 | 1.1:+29509121 | None:intergenic |
| TCATCAACAATGGCAAAATC+AGG | 0.448007 | 1.1:+29510013 | None:intergenic |
| AGAGGATCTGAAAGGGAGTA+TGG | 0.453042 | 1.1:-29509215 | MS.gene94987:CDS |
| GAGGTGGAGAGGATCTGAAA+GGG | 0.458984 | 1.1:-29509222 | MS.gene94987:CDS |
| TCTGTCAAGCACATCTAGTC+AGG | 0.463598 | 1.1:-29508074 | MS.gene94987:intron |
| CTTTACGTTACACTATATAT+GGG | 0.466517 | 1.1:-29509324 | MS.gene94987:CDS |
| CCTCGTCCAAAAGAAATTCT+CGG | 0.466532 | 1.1:+29509059 | None:intergenic |
| CTAATCATTATGATAAATGA+TGG | 0.472724 | 1.1:-29510385 | None:intergenic |
| AGGGCTGCCCGTGTTTCCAC+TGG | 0.474496 | 1.1:+29509115 | None:intergenic |
| GTGAAAGACTTCGTTAAACT+TGG | 0.475881 | 1.1:-29510256 | MS.gene94987:CDS |
| TTCGGTATGGTACCTACCAT+TGG | 0.478269 | 1.1:-29508199 | MS.gene94987:CDS |
| TTTATTACAGCTGCCAAAAG+TGG | 0.497079 | 1.1:-29509244 | MS.gene94987:CDS |
| GACCAGGCTTTAGAAGGTGG+AGG | 0.497384 | 1.1:-29510175 | MS.gene94987:CDS |
| TGCATTCTGAACTCCTAGTA+AGG | 0.499806 | 1.1:+29508231 | None:intergenic |
| GTAAGAATTATGTCCTTACT+AGG | 0.500477 | 1.1:-29508244 | MS.gene94987:CDS |
| AAAGGGAGTATGGCTGAGCT+TGG | 0.501167 | 1.1:-29509205 | MS.gene94987:CDS |
| TAGGTACCATACCGAAAATA+GGG | 0.501824 | 1.1:+29508206 | None:intergenic |
| TCTTAGCAGATTATCTTCTC+GGG | 0.503708 | 1.1:-29507830 | MS.gene94987:intron |
| TAATTATAAGGGCAAAGTAT+GGG | 0.504028 | 1.1:+29510077 | None:intergenic |
| CGGTCAGAATATCTCTTGCC+GGG | 0.507660 | 1.1:-29509169 | MS.gene94987:CDS |
| TTTATCCTCTTCAGTTATGG+TGG | 0.508378 | 1.1:+29508150 | None:intergenic |
| GTGCTGGAGTTCTTGACTGC+AGG | 0.510421 | 1.1:-29508103 | MS.gene94987:CDS |
| GGAGGTGGAGAGGATCTGAA+AGG | 0.512007 | 1.1:-29509223 | MS.gene94987:CDS |
| TGCTGTGACAAGGGAACAAA+TGG | 0.515122 | 1.1:-29508266 | MS.gene94987:CDS |
| AACCGCAGCCAGTGGAAACA+CGG | 0.515912 | 1.1:-29509123 | MS.gene94987:CDS |
| TTACTGATAGAGACTCTTGA+CGG | 0.519048 | 1.1:-29509371 | MS.gene94987:intron |
| GCTTGCAAAGGTCTTTGACC+AGG | 0.523145 | 1.1:-29510191 | MS.gene94987:CDS |
| TCAAAGACCTTTGCAAGCAC+TGG | 0.524525 | 1.1:+29510196 | None:intergenic |
| GATGTTACAGACTGGAATCC+CGG | 0.531571 | 1.1:+29509151 | None:intergenic |
| CGGATGAATCCCCTCGGCTA+AGG | 0.532282 | 1.1:-29509351 | MS.gene94987:CDS |
| TTTGACCAGGCTTTAGAAGG+TGG | 0.532307 | 1.1:-29510178 | MS.gene94987:CDS |
| AATTGCTCATCTCATCCATC+GGG | 0.532594 | 1.1:-29510293 | MS.gene94987:CDS |
| AAACATCAACTTTCAGGAGC+TGG | 0.534626 | 1.1:-29510146 | MS.gene94987:CDS |
| ACCAGGCTTTAGAAGGTGGA+GGG | 0.538065 | 1.1:-29510174 | MS.gene94987:CDS |
| AAACTTGGTTTCATCCCAGA+TGG | 0.540981 | 1.1:-29510241 | MS.gene94987:CDS |
| AAGGGAGTATGGCTGAGCTT+GGG | 0.543384 | 1.1:-29509204 | MS.gene94987:CDS |
| TTATCCTCTTCAGTTATGGT+GGG | 0.547564 | 1.1:+29508151 | None:intergenic |
| CAATTGCTCATCTCATCCAT+CGG | 0.555375 | 1.1:-29510294 | MS.gene94987:CDS |
| AATTATAAGGGCAAAGTATG+GGG | 0.557155 | 1.1:+29510078 | None:intergenic |
| GGGCATTGATGCTGTGACAA+GGG | 0.561217 | 1.1:-29508275 | MS.gene94987:CDS |
| ACCGCAGCCAGTGGAAACAC+GGG | 0.564302 | 1.1:-29509122 | MS.gene94987:CDS |
| ACAGCTGCCAAAAGTGGAGG+TGG | 0.572452 | 1.1:-29509238 | MS.gene94987:CDS |
| CCTTATAATTAGGGCTATCG+GGG | 0.576502 | 1.1:-29510065 | MS.gene94987:CDS |
| GAACAATGTCCAGAAAGTGC+TGG | 0.577732 | 1.1:-29508119 | MS.gene94987:CDS |
| AGCCTATCCATATATTGCAC+AGG | 0.579392 | 1.1:-29509990 | MS.gene94987:intron |
| TGCCAAAAGTGGAGGTGGAG+AGG | 0.579882 | 1.1:-29509233 | MS.gene94987:CDS |
| TATACCCACCATAACTGAAG+AGG | 0.586389 | 1.1:-29508155 | MS.gene94987:CDS |
| ATTACAGCTGCCAAAAGTGG+AGG | 0.587817 | 1.1:-29509241 | MS.gene94987:CDS |
| GATCTAAATTGACTCCATCT+GGG | 0.588365 | 1.1:+29510227 | None:intergenic |
| GTAAAGCACTCCTTAGCCGA+GGG | 0.589316 | 1.1:+29509341 | None:intergenic |
| GGCTTAAAGCGTCCAATGGT+AGG | 0.593364 | 1.1:+29508187 | None:intergenic |
| CCAGGCTTTAGAAGGTGGAG+GGG | 0.593525 | 1.1:-29510173 | MS.gene94987:CDS |
| ATGGTGGGTATAAGAGCTGC+GGG | 0.595967 | 1.1:+29508166 | None:intergenic |
| GATTGACTGCAGATTGTCAA+GGG | 0.597608 | 1.1:-29508295 | MS.gene94987:intron |
| AGGGCATTGATGCTGTGACA+AGG | 0.597768 | 1.1:-29508276 | MS.gene94987:CDS |
| TATCCTAAAAGGATAATCAA+AGG | 0.601605 | 1.1:+29510102 | None:intergenic |
| CCGGCAAGAGATATTCTGAC+CGG | 0.601734 | 1.1:+29509170 | None:intergenic |
| ATCTCAACAACCGCAGCCAG+TGG | 0.604477 | 1.1:-29509131 | MS.gene94987:CDS |
| TACCTGTGCAATATATGGAT+AGG | 0.609388 | 1.1:+29509988 | None:intergenic |
| TGGATAGGCTTCATCAACAA+TGG | 0.610971 | 1.1:+29510003 | None:intergenic |
| TGCGGGCTTAAAGCGTCCAA+TGG | 0.612041 | 1.1:+29508183 | None:intergenic |
| CTATGGCTGGATAATCCCGA+TGG | 0.613934 | 1.1:+29510278 | None:intergenic |
| TGATTGACTGCAGATTGTCA+AGG | 0.617529 | 1.1:-29508296 | MS.gene94987:intron |
| TATCTTGCCAGTGCTTGCAA+AGG | 0.619857 | 1.1:-29510203 | MS.gene94987:CDS |
| TATGGTGGGTATAAGAGCTG+CGG | 0.631457 | 1.1:+29508165 | None:intergenic |
| CGTAAAGCACTCCTTAGCCG+AGG | 0.633199 | 1.1:+29509340 | None:intergenic |
| GTTGTTGAGATGTTACAGAC+TGG | 0.636049 | 1.1:+29509143 | None:intergenic |
| TCTTGACGGATGAATCCCCT+CGG | 0.651670 | 1.1:-29509357 | MS.gene94987:CDS |
| AGCTGTAATAAAATTCTCGA+AGG | 0.654599 | 1.1:+29509255 | None:intergenic |
| ATTATAAGGGCAAAGTATGG+GGG | 0.655388 | 1.1:+29510079 | None:intergenic |
| TAAAGCACTCCTTAGCCGAG+GGG | 0.715422 | 1.1:+29509342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATAATAACTAAATTACT+TGG | + | chr1.1:29509207-29509226 | None:intergenic | 15.0% |
| !! | TAGTATAAAAATATGATTGT+AGG | + | chr1.1:29509346-29509365 | None:intergenic | 15.0% |
| !!! | AAATGGTTACTATTAAATTT+TGG | - | chr1.1:29508579-29508598 | MS.gene94987:intron | 15.0% |
| !! | CTAAAATTGAATAAATCAGT+TGG | - | chr1.1:29509602-29509621 | MS.gene94987:intron | 20.0% |
| !! | TTATTTATCTATTTGTCTGT+GGG | - | chr1.1:29510245-29510264 | MS.gene94987:CDS | 20.0% |
| !! | TTCATCAATTTCAAAAACAT+TGG | + | chr1.1:29508353-29508372 | None:intergenic | 20.0% |
| !!! | AATTTTCCGATAAAGAATTT+TGG | + | chr1.1:29508641-29508660 | None:intergenic | 20.0% |
| !!! | TGATGTAGATATAACAATTT+TGG | - | chr1.1:29508540-29508559 | MS.gene94987:intron | 20.0% |
| !!! | TGATTTATTTTAGCTTAACA+AGG | - | chr1.1:29510212-29510231 | MS.gene94987:CDS | 20.0% |
| !!! | TTTTATACTAATTACAACAG+AGG | - | chr1.1:29509356-29509375 | MS.gene94987:CDS | 20.0% |
| ! | AATTATACCTGTGCAATATA+TGG | + | chr1.1:29508204-29508223 | None:intergenic | 25.0% |
| ! | ACAGAAAAAATTAAGCCAAT+GGG | - | chr1.1:29508437-29508456 | MS.gene94987:intron | 25.0% |
| ! | AGTACACCAAAATTCTTTAT+CGG | - | chr1.1:29508632-29508651 | MS.gene94987:intron | 25.0% |
| ! | ATACTTTGCCCTTATAATTA+GGG | - | chr1.1:29508110-29508129 | MS.gene94987:CDS | 25.0% |
| ! | CAATAAAGTAAAAGAAGTCA+AGG | + | chr1.1:29509263-29509282 | None:intergenic | 25.0% |
| ! | CTTATTTATCTATTTGTCTG+TGG | - | chr1.1:29510244-29510263 | MS.gene94987:CDS | 25.0% |
| ! | CTTTACGTTACACTATATAT+GGG | - | chr1.1:29508860-29508879 | MS.gene94987:intron | 25.0% |
| ! | TAATTATAAGGGCAAAGTAT+GGG | + | chr1.1:29508110-29508129 | None:intergenic | 25.0% |
| ! | TACAGAAAAAATTAAGCCAA+TGG | - | chr1.1:29508436-29508455 | MS.gene94987:intron | 25.0% |
| ! | TATCCTAAAAGGATAATCAA+AGG | + | chr1.1:29508085-29508104 | None:intergenic | 25.0% |
| ! | TTCACAACTAATATTCATGA+CGG | - | chr1.1:29508661-29508680 | MS.gene94987:intron | 25.0% |
| !! | ATTGTCGAAGTTTTCAAATT+TGG | - | chr1.1:29509320-29509339 | MS.gene94987:CDS | 25.0% |
| !! | GATATCTATGTTTTACTTGA+AGG | - | chr1.1:29508315-29508334 | MS.gene94987:intron | 25.0% |
| !! | GTTGGTAAAATTAACTGAAA+AGG | - | chr1.1:29509620-29509639 | MS.gene94987:intron | 25.0% |
| !! | TAACTGAAAAGGTTTGTTTA+TGG | - | chr1.1:29509631-29509650 | MS.gene94987:intron | 25.0% |
| !! | TAGATATAACAATTTTGGAC+AGG | - | chr1.1:29508545-29508564 | MS.gene94987:intron | 25.0% |
| !! | TTACCTTTGATTATCCTTTT+AGG | - | chr1.1:29508079-29508098 | MS.gene94987:CDS | 25.0% |
| !!! | TAGTCTTAGACTTAGTTTTA+TGG | - | chr1.1:29508609-29508628 | MS.gene94987:intron | 25.0% |
| !!! | TTTTTTCCGAGAATTTCTTT+TGG | - | chr1.1:29509119-29509138 | MS.gene94987:CDS | 25.0% |
| AAAAATTTCTGTCTAGTGTC+TGG | - | chr1.1:29508461-29508480 | MS.gene94987:intron | 30.0% | |
| AACTTTATCCTCTTCAGTTA+TGG | + | chr1.1:29510040-29510059 | None:intergenic | 30.0% | |
| AATTATAAGGGCAAAGTATG+GGG | + | chr1.1:29508109-29508128 | None:intergenic | 30.0% | |
| AGCTGTAATAAAATTCTCGA+AGG | + | chr1.1:29508932-29508951 | None:intergenic | 30.0% | |
| AGTTAAATCTGAACAAGGTA+TGG | - | chr1.1:29509459-29509478 | MS.gene94987:intron | 30.0% | |
| ATGACTCCAAAAACAGTTTA+TGG | + | chr1.1:29509717-29509736 | None:intergenic | 30.0% | |
| CATACTTTGCCCTTATAATT+AGG | - | chr1.1:29508109-29508128 | MS.gene94987:CDS | 30.0% | |
| CTAATTATAAGGGCAAAGTA+TGG | + | chr1.1:29508111-29508130 | None:intergenic | 30.0% | |
| GCTTTACGTTACACTATATA+TGG | - | chr1.1:29508859-29508878 | MS.gene94987:intron | 30.0% | |
| GGAGTTATTGTACTTTCATA+TGG | + | chr1.1:29509234-29509253 | None:intergenic | 30.0% | |
| GTAAGAATTATGTCCTTACT+AGG | - | chr1.1:29509940-29509959 | MS.gene94987:intron | 30.0% | |
| TACACTATATATGGGAAATC+TGG | - | chr1.1:29508868-29508887 | MS.gene94987:intron | 30.0% | |
| TCTAGTGTCTGGAAATAAAA+GGG | - | chr1.1:29508472-29508491 | MS.gene94987:intron | 30.0% | |
| TTCTTAGCAGATTATCTTCT+CGG | - | chr1.1:29510353-29510372 | MS.gene94987:CDS | 30.0% | |
| TTTAACGAAGTCTTTCACTA+TGG | + | chr1.1:29507926-29507945 | None:intergenic | 30.0% | |
| ! | TTTTGTCGTAAAATTCCACA+TGG | - | chr1.1:29509565-29509584 | MS.gene94987:intron | 30.0% |
| !!! | AGACAGAAATTTTTTCCCAT+TGG | + | chr1.1:29508455-29508474 | None:intergenic | 30.0% |
| !!! | ATATTCATGACGGATTTTGA+TGG | - | chr1.1:29508671-29508690 | MS.gene94987:intron | 30.0% |
| AAACAAAACTTAAGCGCCAT+AGG | + | chr1.1:29509671-29509690 | None:intergenic | 35.0% | |
| ACTCCAAAAACAGTTTATGG+TGG | + | chr1.1:29509714-29509733 | None:intergenic | 35.0% | |
| AGAAGTTCTTGGATAATCTG+AGG | + | chr1.1:29510292-29510311 | None:intergenic | 35.0% | |
| AGCGTAGTTAAATCTGAACA+AGG | - | chr1.1:29509454-29509473 | MS.gene94987:intron | 35.0% | |
| AGTTCATTACTCGAAACTGA+TGG | + | chr1.1:29509787-29509806 | None:intergenic | 35.0% | |
| ATCAGACAGCAAAAATGCTA+GGG | + | chr1.1:29509091-29509110 | None:intergenic | 35.0% | |
| ATTATAAGGGCAAAGTATGG+GGG | + | chr1.1:29508108-29508127 | None:intergenic | 35.0% | |
| CTAGTGTCTGGAAATAAAAG+GGG | - | chr1.1:29508473-29508492 | MS.gene94987:intron | 35.0% | |
| GATAATCTGCTAAGAACATC+AGG | + | chr1.1:29510349-29510368 | None:intergenic | 35.0% | |
| GATTCAAGAAAAATTCGCCA+AGG | - | chr1.1:29509503-29509522 | MS.gene94987:intron | 35.0% | |
| GGCAAAAAACATCAACTTTC+AGG | - | chr1.1:29508032-29508051 | MS.gene94987:intron | 35.0% | |
| GTCTAGTGTCTGGAAATAAA+AGG | - | chr1.1:29508471-29508490 | MS.gene94987:intron | 35.0% | |
| GTGAAAGACTTCGTTAAACT+TGG | - | chr1.1:29507928-29507947 | MS.gene94987:intron | 35.0% | |
| TACCTGTGCAATATATGGAT+AGG | + | chr1.1:29508199-29508218 | None:intergenic | 35.0% | |
| TAGGTACCATACCGAAAATA+GGG | + | chr1.1:29509981-29510000 | None:intergenic | 35.0% | |
| TAGTGTCTGGAAATAAAAGG+GGG | - | chr1.1:29508474-29508493 | MS.gene94987:intron | 35.0% | |
| TATCAGACAGCAAAAATGCT+AGG | + | chr1.1:29509092-29509111 | None:intergenic | 35.0% | |
| TCATCAACAATGGCAAAATC+AGG | + | chr1.1:29508174-29508193 | None:intergenic | 35.0% | |
| TCTTAGCAGATTATCTTCTC+GGG | - | chr1.1:29510354-29510373 | MS.gene94987:CDS | 35.0% | |
| TTACTGATAGAGACTCTTGA+CGG | - | chr1.1:29508813-29508832 | MS.gene94987:intron | 35.0% | |
| TTATCCTCTTCAGTTATGGT+GGG | + | chr1.1:29510036-29510055 | None:intergenic | 35.0% | |
| TTTATCCTCTTCAGTTATGG+TGG | + | chr1.1:29510037-29510056 | None:intergenic | 35.0% | |
| TTTATCTATTTGTCTGTGGG+TGG | - | chr1.1:29510248-29510267 | MS.gene94987:CDS | 35.0% | |
| TTTATTACAGCTGCCAAAAG+TGG | - | chr1.1:29508940-29508959 | MS.gene94987:intron | 35.0% | |
| ! | CAAGGTACAATGTTACTTCT+GGG | - | chr1.1:29509521-29509540 | MS.gene94987:intron | 35.0% |
| ! | CATTCCATACTTTTGATCGT+CGG | + | chr1.1:29507863-29507882 | None:intergenic | 35.0% |
| ! | GATCTAAATTGACTCCATCT+GGG | + | chr1.1:29507960-29507979 | None:intergenic | 35.0% |
| ! | TAGCCACCATAAACTGTTTT+TGG | - | chr1.1:29509708-29509727 | MS.gene94987:intron | 35.0% |
| ! | TCAATTTTGTAACAAGCCCT+GGG | + | chr1.1:29507840-29507859 | None:intergenic | 35.0% |
| !! | ACTGGCTTATAGCTTTAACT+TGG | - | chr1.1:29508277-29508296 | MS.gene94987:CDS | 35.0% |
| !! | AGCATTTTTGCTGTCTGATA+AGG | - | chr1.1:29509092-29509111 | MS.gene94987:CDS | 35.0% |
| !! | CATTTTTGCTGTCTGATAAG+GGG | - | chr1.1:29509094-29509113 | MS.gene94987:CDS | 35.0% |
| !! | GAAATCTTTTGTTGTACCCA+GGG | - | chr1.1:29507821-29507840 | MS.gene94987:CDS | 35.0% |
| !! | GCATTTTTGCTGTCTGATAA+GGG | - | chr1.1:29509093-29509112 | MS.gene94987:CDS | 35.0% |
| AAACATCAACTTTCAGGAGC+TGG | - | chr1.1:29508038-29508057 | MS.gene94987:intron | 40.0% | |
| AAACTTGGTTTCATCCCAGA+TGG | - | chr1.1:29507943-29507962 | MS.gene94987:intron | 40.0% | |
| AATTGCTCATCTCATCCATC+GGG | - | chr1.1:29507891-29507910 | MS.gene94987:intron | 40.0% | |
| AGCCTATCCATATATTGCAC+AGG | - | chr1.1:29508194-29508213 | MS.gene94987:CDS | 40.0% | |
| AGCTTGGGCTTATTACTAAC+CGG | - | chr1.1:29508995-29509014 | MS.gene94987:intron | 40.0% | |
| CAATTGCTCATCTCATCCAT+CGG | - | chr1.1:29507890-29507909 | MS.gene94987:intron | 40.0% | |
| CAGTTCTTGACAATGACAGA+GGG | + | chr1.1:29508261-29508280 | None:intergenic | 40.0% | |
| CCAGAAGTAACATTGTACCT+TGG | + | chr1.1:29509523-29509542 | None:intergenic | 40.0% | |
| CCCGATAGCCCTAATTATAA+GGG | + | chr1.1:29508121-29508140 | None:intergenic | 40.0% | |
| CCCTTATAATTAGGGCTATC+GGG | - | chr1.1:29508118-29508137 | MS.gene94987:CDS | 40.0% | |
| CCTCGTCCAAAAGAAATTCT+CGG | + | chr1.1:29509128-29509147 | None:intergenic | 40.0% | |
| CCTTATAATTAGGGCTATCG+GGG | - | chr1.1:29508119-29508138 | MS.gene94987:CDS | 40.0% | |
| CTTTCAAGCACTTCTTGTTC+AGG | + | chr1.1:29508376-29508395 | None:intergenic | 40.0% | |
| GATGTAATTGGATGCCTTCA+AGG | - | chr1.1:29508502-29508521 | MS.gene94987:intron | 40.0% | |
| GATTGACTGCAGATTGTCAA+GGG | - | chr1.1:29509889-29509908 | MS.gene94987:intron | 40.0% | |
| GCACAAGAAAATTTGCAGTG+TGG | + | chr1.1:29508742-29508761 | None:intergenic | 40.0% | |
| GCCCTTATAATTAGGGCTAT+CGG | - | chr1.1:29508117-29508136 | MS.gene94987:CDS | 40.0% | |
| GTAGGTACCATACCGAAAAT+AGG | + | chr1.1:29509982-29510001 | None:intergenic | 40.0% | |
| GTTGTTGAGATGTTACAGAC+TGG | + | chr1.1:29509044-29509063 | None:intergenic | 40.0% | |
| TAAAAGAAGTCAAGGACGAG+AGG | + | chr1.1:29509255-29509274 | None:intergenic | 40.0% | |
| TATACCCACCATAACTGAAG+AGG | - | chr1.1:29510029-29510048 | MS.gene94987:CDS | 40.0% | |
| TGATTGACTGCAGATTGTCA+AGG | - | chr1.1:29509888-29509907 | MS.gene94987:intron | 40.0% | |
| TGCACAGGTATAATTGTCTC+TGG | - | chr1.1:29508209-29508228 | MS.gene94987:CDS | 40.0% | |
| TGCATTCTGAACTCCTAGTA+AGG | + | chr1.1:29509956-29509975 | None:intergenic | 40.0% | |
| TGGATAGGCTTCATCAACAA+TGG | + | chr1.1:29508184-29508203 | None:intergenic | 40.0% | |
| TGTCGTAAAATTCCACATGG+TGG | - | chr1.1:29509568-29509587 | MS.gene94987:intron | 40.0% | |
| TTGACCGACGATCAAAAGTA+TGG | - | chr1.1:29507856-29507875 | MS.gene94987:intron | 40.0% | |
| ! | ACAATTTTGGACAGGATGCA+CGG | - | chr1.1:29508553-29508572 | MS.gene94987:intron | 40.0% |
| ! | CAGAATGCAAGCCCTATTTT+CGG | - | chr1.1:29509967-29509986 | MS.gene94987:intron | 40.0% |
| ! | CCAAGGTACAATGTTACTTC+TGG | - | chr1.1:29509520-29509539 | MS.gene94987:intron | 40.0% |
| ! | GGATCTAAATTGACTCCATC+TGG | + | chr1.1:29507961-29507980 | None:intergenic | 40.0% |
| ! | GTCAATTTTGTAACAAGCCC+TGG | + | chr1.1:29507841-29507860 | None:intergenic | 40.0% |
| !! | AAGTATGGGGGTATCCTAAA+AGG | + | chr1.1:29508096-29508115 | None:intergenic | 40.0% |
| !! | GGAAATCTTTTGTTGTACCC+AGG | - | chr1.1:29507820-29507839 | MS.gene94987:CDS | 40.0% |
| !! | TCTGCGCAAGTCTTGTTATA+TGG | - | chr1.1:29509843-29509862 | MS.gene94987:intron | 40.0% |
| !! | TTGGAAGGGATAGCTTTAGT+AGG | - | chr1.1:29508144-29508163 | MS.gene94987:CDS | 40.0% |
| AAGGGGGACATCGATGTAAT+TGG | - | chr1.1:29508490-29508509 | MS.gene94987:intron | 45.0% | |
| ACGAAGTCTTTCACTATGGC+TGG | + | chr1.1:29507922-29507941 | None:intergenic | 45.0% | |
| AGAGGATCTGAAAGGGAGTA+TGG | - | chr1.1:29508969-29508988 | MS.gene94987:intron | 45.0% | |
| ATCCCTCCTCTAAACCTTGA+AGG | + | chr1.1:29508519-29508538 | None:intergenic | 45.0% | |
| ATGCCTTCAAGGTTTAGAGG+AGG | - | chr1.1:29508513-29508532 | MS.gene94987:intron | 45.0% | |
| ATTACAGCTGCCAAAAGTGG+AGG | - | chr1.1:29508943-29508962 | MS.gene94987:intron | 45.0% | |
| CCAGTTCTTGACAATGACAG+AGG | + | chr1.1:29508262-29508281 | None:intergenic | 45.0% | |
| CCCCGATAGCCCTAATTATA+AGG | + | chr1.1:29508122-29508141 | None:intergenic | 45.0% | |
| CCTCTGTCATTGTCAAGAAC+TGG | - | chr1.1:29508259-29508278 | MS.gene94987:CDS | 45.0% | |
| GATGTTACAGACTGGAATCC+CGG | + | chr1.1:29509036-29509055 | None:intergenic | 45.0% | |
| GCAAAAGTAATGCCACCATG+TGG | + | chr1.1:29509583-29509602 | None:intergenic | 45.0% | |
| TATCTTGCCAGTGCTTGCAA+AGG | - | chr1.1:29507981-29508000 | MS.gene94987:intron | 45.0% | |
| TCAAAGACCTTTGCAAGCAC+TGG | + | chr1.1:29507991-29508010 | None:intergenic | 45.0% | |
| TCAAGAACTCCAGCACTTTC+TGG | + | chr1.1:29510077-29510096 | None:intergenic | 45.0% | |
| TCTGTCAAGCACATCTAGTC+AGG | - | chr1.1:29510110-29510129 | MS.gene94987:CDS | 45.0% | |
| TGAGGAACATTGAGAGCCTA+AGG | + | chr1.1:29510274-29510293 | None:intergenic | 45.0% | |
| TGCCTTCAAGGTTTAGAGGA+GGG | - | chr1.1:29508514-29508533 | MS.gene94987:intron | 45.0% | |
| TGCTGTGACAAGGGAACAAA+TGG | - | chr1.1:29509918-29509937 | MS.gene94987:intron | 45.0% | |
| TGGATGCCTTCAAGGTTTAG+AGG | - | chr1.1:29508510-29508529 | MS.gene94987:intron | 45.0% | |
| TTCGGTATGGTACCTACCAT+TGG | - | chr1.1:29509985-29510004 | MS.gene94987:intron | 45.0% | |
| ! | AATTAGGGCTATCGGGGTTT+TGG | - | chr1.1:29508125-29508144 | MS.gene94987:CDS | 45.0% |
| ! | CAATTTTGGACAGGATGCAC+GGG | - | chr1.1:29508554-29508573 | MS.gene94987:intron | 45.0% |
| ! | CCGAGAATTTCTTTTGGACG+AGG | - | chr1.1:29509125-29509144 | MS.gene94987:CDS | 45.0% |
| ! | GAACAATGTCCAGAAAGTGC+TGG | - | chr1.1:29510065-29510084 | MS.gene94987:CDS | 45.0% |
| ! | TGCAAGCCCTATTTTCGGTA+TGG | - | chr1.1:29509972-29509991 | MS.gene94987:intron | 45.0% |
| !! | GTCTTTGACCAGGCTTTAGA+AGG | - | chr1.1:29508003-29508022 | MS.gene94987:intron | 45.0% |
| !! | TATGGTGGGTATAAGAGCTG+CGG | + | chr1.1:29510022-29510041 | None:intergenic | 45.0% |
| !! | TTTGACCAGGCTTTAGAAGG+TGG | - | chr1.1:29508006-29508025 | MS.gene94987:intron | 45.0% |
| !! | TTTGCAAGCACTGGCAAGAT+AGG | + | chr1.1:29507982-29508001 | None:intergenic | 45.0% |
| AGAACTTCTGCCAGTGTTGC+CGG | - | chr1.1:29510303-29510322 | MS.gene94987:CDS | 50.0% | |
| AGCACTTTAGCAGAGATGCC+CGG | + | chr1.1:29510325-29510344 | None:intergenic | 50.0% | |
| ATTTGTCTGTGGGTGGCCTT+AGG | - | chr1.1:29510255-29510274 | MS.gene94987:CDS | 50.0% | |
| CCGGCAAGAGATATTCTGAC+CGG | + | chr1.1:29509017-29509036 | None:intergenic | 50.0% | |
| CCGGTCAGAATATCTCTTGC+CGG | - | chr1.1:29509014-29509033 | MS.gene94987:intron | 50.0% | |
| CGGTCAGAATATCTCTTGCC+GGG | - | chr1.1:29509015-29509034 | MS.gene94987:intron | 50.0% | |
| CTATGGCTGGATAATCCCGA+TGG | + | chr1.1:29507909-29507928 | None:intergenic | 50.0% | |
| GAGGTGGAGAGGATCTGAAA+GGG | - | chr1.1:29508962-29508981 | MS.gene94987:intron | 50.0% | |
| GCAACACTGGCAGAAGTTCT+TGG | + | chr1.1:29510303-29510322 | None:intergenic | 50.0% | |
| GCTTGCAAAGGTCTTTGACC+AGG | - | chr1.1:29507993-29508012 | MS.gene94987:intron | 50.0% | |
| ! | AAAGGGAGTATGGCTGAGCT+TGG | - | chr1.1:29508979-29508998 | MS.gene94987:intron | 50.0% |
| ! | AAGGGAGTATGGCTGAGCTT+GGG | - | chr1.1:29508980-29508999 | MS.gene94987:intron | 50.0% |
| ! | ATCCTCTCCACCTCCACTTT+TGG | + | chr1.1:29508956-29508975 | None:intergenic | 50.0% |
| ! | GGCTTAAAGCGTCCAATGGT+AGG | + | chr1.1:29510000-29510019 | None:intergenic | 50.0% |
| ! | GTAAAGCACTCCTTAGCCGA+GGG | + | chr1.1:29508846-29508865 | None:intergenic | 50.0% |
| ! | TAAAGCACTCCTTAGCCGAG+GGG | + | chr1.1:29508845-29508864 | None:intergenic | 50.0% |
| ! | TCTTGACGGATGAATCCCCT+CGG | - | chr1.1:29508827-29508846 | MS.gene94987:intron | 50.0% |
| !! | ACCAGGCTTTAGAAGGTGGA+GGG | - | chr1.1:29508010-29508029 | MS.gene94987:intron | 50.0% |
| !! | AGGGCATTGATGCTGTGACA+AGG | - | chr1.1:29509908-29509927 | MS.gene94987:intron | 50.0% |
| !! | ATGGTGGGTATAAGAGCTGC+GGG | + | chr1.1:29510021-29510040 | None:intergenic | 50.0% |
| !! | GGGCATTGATGCTGTGACAA+GGG | - | chr1.1:29509909-29509928 | MS.gene94987:intron | 50.0% |
| AACCGCAGCCAGTGGAAACA+CGG | - | chr1.1:29509061-29509080 | MS.gene94987:CDS | 55.0% | |
| ACAGCTGCCAAAAGTGGAGG+TGG | - | chr1.1:29508946-29508965 | MS.gene94987:intron | 55.0% | |
| ATCTCAACAACCGCAGCCAG+TGG | - | chr1.1:29509053-29509072 | MS.gene94987:intron | 55.0% | |
| CTTAAGCGCCATAGGCAGCA+TGG | + | chr1.1:29509663-29509682 | None:intergenic | 55.0% | |
| GAACTTCTGCCAGTGTTGCC+GGG | - | chr1.1:29510304-29510323 | MS.gene94987:CDS | 55.0% | |
| GACAGGATGCACGGGAGAAA+TGG | - | chr1.1:29508562-29508581 | MS.gene94987:intron | 55.0% | |
| GGAGGTGGAGAGGATCTGAA+AGG | - | chr1.1:29508961-29508980 | MS.gene94987:intron | 55.0% | |
| GTGCTGGAGTTCTTGACTGC+AGG | - | chr1.1:29510081-29510100 | MS.gene94987:CDS | 55.0% | |
| TGCCAAAAGTGGAGGTGGAG+AGG | - | chr1.1:29508951-29508970 | MS.gene94987:intron | 55.0% | |
| ! | CGTAAAGCACTCCTTAGCCG+AGG | + | chr1.1:29508847-29508866 | None:intergenic | 55.0% |
| ! | TGCGGGCTTAAAGCGTCCAA+TGG | + | chr1.1:29510004-29510023 | None:intergenic | 55.0% |
| !! | CCAGGCTTTAGAAGGTGGAG+GGG | - | chr1.1:29508011-29508030 | MS.gene94987:intron | 55.0% |
| !! | GACCAGGCTTTAGAAGGTGG+AGG | - | chr1.1:29508009-29508028 | MS.gene94987:intron | 55.0% |
| !!! | AGGGCTATCGGGGTTTTGGA+AGG | - | chr1.1:29508129-29508148 | MS.gene94987:CDS | 55.0% |
| !!! | GGGCTATCGGGGTTTTGGAA+GGG | - | chr1.1:29508130-29508149 | MS.gene94987:CDS | 55.0% |
| ACCGCAGCCAGTGGAAACAC+GGG | - | chr1.1:29509062-29509081 | MS.gene94987:CDS | 60.0% | |
| CGGATGAATCCCCTCGGCTA+AGG | - | chr1.1:29508833-29508852 | MS.gene94987:intron | 60.0% | |
| GGCTACTGCCATGCTGCCTA+TGG | - | chr1.1:29509652-29509671 | MS.gene94987:intron | 60.0% | |
| !! | CCCCTCCACCTTCTAAAGCC+TGG | + | chr1.1:29508014-29508033 | None:intergenic | 60.0% |
| AGGGCTGCCCGTGTTTCCAC+TGG | + | chr1.1:29509072-29509091 | None:intergenic | 65.0% | |
| GCAGAGATGCCCGGCAACAC+TGG | + | chr1.1:29510316-29510335 | None:intergenic | 65.0% | |
| ! | GCCCGTGTTTCCACTGGCTG+CGG | + | chr1.1:29509066-29509085 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 29507808 | 29510398 | 29507808 | ID=MS.gene94987 |
| chr1.1 | mRNA | 29507808 | 29510398 | 29507808 | ID=MS.gene94987.t1;Parent=MS.gene94987 |
| chr1.1 | exon | 29509991 | 29510398 | 29509991 | ID=MS.gene94987.t1.exon1;Parent=MS.gene94987.t1 |
| chr1.1 | CDS | 29509991 | 29510398 | 29509991 | ID=cds.MS.gene94987.t1;Parent=MS.gene94987.t1 |
| chr1.1 | exon | 29509060 | 29509383 | 29509060 | ID=MS.gene94987.t1.exon2;Parent=MS.gene94987.t1 |
| chr1.1 | CDS | 29509060 | 29509383 | 29509060 | ID=cds.MS.gene94987.t1;Parent=MS.gene94987.t1 |
| chr1.1 | exon | 29508075 | 29508305 | 29508075 | ID=MS.gene94987.t1.exon3;Parent=MS.gene94987.t1 |
| chr1.1 | CDS | 29508075 | 29508305 | 29508075 | ID=cds.MS.gene94987.t1;Parent=MS.gene94987.t1 |
| chr1.1 | exon | 29507808 | 29507843 | 29507808 | ID=MS.gene94987.t1.exon4;Parent=MS.gene94987.t1 |
| chr1.1 | CDS | 29507808 | 29507843 | 29507808 | ID=cds.MS.gene94987.t1;Parent=MS.gene94987.t1 |
| Gene Sequence |
| Protein sequence |
