Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84326.t1 | XP_003596817.1 | 94.7 | 374 | 18 | 2 | 1 | 373 | 17 | 389 | 1.80E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84326.t1 | Q9SQQ9 | 52.5 | 396 | 146 | 12 | 1 | 373 | 18 | 394 | 3.2e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84326.t1 | G7ITS9 | 94.7 | 374 | 18 | 2 | 1 | 373 | 17 | 389 | 1.3e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene84326.t1 | TF | GARP-G2-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene84326 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene84326 | 0.833177 | 6.20E-56 | -1.69E-46 |
| MS.gene049230 | MS.gene84326 | 0.805811 | 1.11E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene84326 | 0.806748 | 7.08E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene84326 | 0.858867 | 6.13E-63 | -1.69E-46 |
| MS.gene049404 | MS.gene84326 | 0.809256 | 2.07E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene84326 | 0.838044 | 3.63E-57 | -1.69E-46 |
| MS.gene049501 | MS.gene84326 | 0.823136 | 1.63E-53 | -1.69E-46 |
| MS.gene049647 | MS.gene84326 | 0.822751 | 2.00E-53 | -1.69E-46 |
| MS.gene049669 | MS.gene84326 | 0.827765 | 1.31E-54 | -1.69E-46 |
| MS.gene050226 | MS.gene84326 | 0.838828 | 2.28E-57 | -1.69E-46 |
| MS.gene050227 | MS.gene84326 | 0.840783 | 7.06E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene84326 | 0.837589 | 4.75E-57 | -1.69E-46 |
| MS.gene050376 | MS.gene84326 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene84326 | 0.871024 | 9.37E-67 | -1.69E-46 |
| MS.gene050623 | MS.gene84326 | -0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene84326 | 0.839896 | 1.20E-57 | -1.69E-46 |
| MS.gene050719 | MS.gene84326 | 0.827571 | 1.45E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene84326 | 0.823965 | 1.04E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene84326 | 0.835334 | 1.78E-56 | -1.69E-46 |
| MS.gene050750 | MS.gene84326 | 0.843719 | 1.18E-58 | -1.69E-46 |
| MS.gene050780 | MS.gene84326 | 0.808294 | 3.32E-50 | -1.69E-46 |
| MS.gene050787 | MS.gene84326 | 0.812246 | 4.67E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene84326 | 0.814433 | 1.54E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene84326 | 0.802604 | 5.19E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene84326 | 0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene050826 | MS.gene84326 | 0.813478 | 2.51E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene84326 | 0.837247 | 5.82E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene84326 | 0.847876 | 8.76E-60 | -1.69E-46 |
| MS.gene051198 | MS.gene84326 | 0.807666 | 4.52E-50 | -1.69E-46 |
| MS.gene051210 | MS.gene84326 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene051265 | MS.gene84326 | 0.822353 | 2.48E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene84326 | 0.832601 | 8.62E-56 | -1.69E-46 |
| MS.gene051800 | MS.gene84326 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene84326 | 0.81491 | 1.21E-51 | -1.69E-46 |
| MS.gene051935 | MS.gene84326 | 0.810531 | 1.10E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene84326 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene84326 | 0.801979 | 6.97E-49 | -1.69E-46 |
| MS.gene052042 | MS.gene84326 | 0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene84326 | 0.81355 | 2.42E-51 | -1.69E-46 |
| MS.gene052190 | MS.gene84326 | 0.812853 | 3.44E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene84326 | 0.851361 | 9.33E-61 | -1.69E-46 |
| MS.gene052376 | MS.gene84326 | 0.810372 | 1.19E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene84326 | 0.809261 | 2.07E-50 | -1.69E-46 |
| MS.gene052389 | MS.gene84326 | 0.805166 | 1.52E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene84326 | 0.826561 | 2.54E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene84326 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene05288 | MS.gene84326 | 0.832058 | 1.17E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene84326 | 0.808331 | 3.26E-50 | -1.69E-46 |
| MS.gene05289 | MS.gene84326 | 0.817811 | 2.72E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene84326 | 0.812451 | 4.21E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene84326 | 0.84971 | 2.72E-60 | -1.69E-46 |
| MS.gene053184 | MS.gene84326 | 0.847797 | 9.21E-60 | -1.69E-46 |
| MS.gene053201 | MS.gene84326 | 0.83815 | 3.41E-57 | -1.69E-46 |
| MS.gene053221 | MS.gene84326 | 0.802414 | 5.68E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene84326 | 0.817592 | 3.04E-52 | -1.69E-46 |
| MS.gene053565 | MS.gene84326 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene053584 | MS.gene84326 | 0.83174 | 1.41E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene84326 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene05414 | MS.gene84326 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene84326 | 0.840974 | 6.29E-58 | -1.69E-46 |
| MS.gene054160 | MS.gene84326 | 0.806639 | 7.46E-50 | -1.69E-46 |
| MS.gene05417 | MS.gene84326 | 0.808996 | 2.35E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene84326 | 0.840723 | 7.32E-58 | -1.69E-46 |
| MS.gene054291 | MS.gene84326 | -0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene84326 | 0.824206 | 9.15E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene84326 | 0.839662 | 1.39E-57 | -1.69E-46 |
| MS.gene054467 | MS.gene84326 | 0.845351 | 4.29E-59 | -1.69E-46 |
| MS.gene054468 | MS.gene84326 | 0.849591 | 2.93E-60 | -1.69E-46 |
| MS.gene054472 | MS.gene84326 | 0.840869 | 6.71E-58 | -1.69E-46 |
| MS.gene054542 | MS.gene84326 | 0.810476 | 1.13E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene84326 | 0.850223 | 1.95E-60 | -1.69E-46 |
| MS.gene054610 | MS.gene84326 | 0.811971 | 5.36E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene84326 | 0.801817 | 7.53E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene84326 | 0.821911 | 3.14E-53 | -1.69E-46 |
| MS.gene054930 | MS.gene84326 | 0.839325 | 1.70E-57 | -1.69E-46 |
| MS.gene05510 | MS.gene84326 | 0.84922 | 3.72E-60 | -1.69E-46 |
| MS.gene055227 | MS.gene84326 | 0.836684 | 8.10E-57 | -1.69E-46 |
| MS.gene055228 | MS.gene84326 | 0.800621 | 1.32E-48 | -1.69E-46 |
| MS.gene055356 | MS.gene84326 | 0.848976 | 4.35E-60 | -1.69E-46 |
| MS.gene055357 | MS.gene84326 | 0.833164 | 6.24E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene84326 | 0.842463 | 2.55E-58 | -1.69E-46 |
| MS.gene055367 | MS.gene84326 | 0.822029 | 2.95E-53 | -1.69E-46 |
| MS.gene055608 | MS.gene84326 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene84326 | 0.814902 | 1.22E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene84326 | 0.874999 | 4.35E-68 | -1.69E-46 |
| MS.gene055818 | MS.gene84326 | 0.843629 | 1.25E-58 | -1.69E-46 |
| MS.gene055926 | MS.gene84326 | 0.826122 | 3.23E-54 | -1.69E-46 |
| MS.gene05604 | MS.gene84326 | 0.841315 | 5.12E-58 | -1.69E-46 |
| MS.gene056162 | MS.gene84326 | 0.803997 | 2.67E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene84326 | 0.819308 | 1.24E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene84326 | 0.847786 | 9.28E-60 | -1.69E-46 |
| MS.gene056873 | MS.gene84326 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene056952 | MS.gene84326 | 0.80525 | 1.46E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene84326 | 0.811425 | 7.04E-51 | -1.69E-46 |
| MS.gene057021 | MS.gene84326 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene057026 | MS.gene84326 | 0.850684 | 1.45E-60 | -1.69E-46 |
| MS.gene057194 | MS.gene84326 | 0.841622 | 4.25E-58 | -1.69E-46 |
| MS.gene057200 | MS.gene84326 | 0.811423 | 7.06E-51 | -1.69E-46 |
| MS.gene057394 | MS.gene84326 | 0.827407 | 1.59E-54 | -1.69E-46 |
| MS.gene057395 | MS.gene84326 | 0.80166 | 8.11E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene84326 | 0.810225 | 1.28E-50 | -1.69E-46 |
| MS.gene057469 | MS.gene84326 | 0.81984 | 9.40E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene84326 | 0.819532 | 1.11E-52 | -1.69E-46 |
| MS.gene057639 | MS.gene84326 | 0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene057750 | MS.gene84326 | 0.819101 | 1.39E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene84326 | 0.829417 | 5.21E-55 | -1.69E-46 |
| MS.gene058146 | MS.gene84326 | 0.852383 | 4.79E-61 | -1.69E-46 |
| MS.gene058168 | MS.gene84326 | 0.801331 | 9.47E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene84326 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene84326 | 0.805083 | 1.58E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene84326 | 0.845353 | 4.28E-59 | -1.69E-46 |
| MS.gene059124 | MS.gene84326 | 0.813849 | 2.08E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene84326 | 0.846906 | 1.62E-59 | -1.69E-46 |
| MS.gene059161 | MS.gene84326 | 0.828085 | 1.09E-54 | -1.69E-46 |
| MS.gene059272 | MS.gene84326 | 0.817728 | 2.84E-52 | -1.69E-46 |
| MS.gene059382 | MS.gene84326 | 0.833087 | 6.52E-56 | -1.69E-46 |
| MS.gene059550 | MS.gene84326 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene84326 | 0.836511 | 8.96E-57 | -1.69E-46 |
| MS.gene05973 | MS.gene84326 | 0.821946 | 3.08E-53 | -1.69E-46 |
| MS.gene059789 | MS.gene84326 | 0.834621 | 2.70E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene84326 | 0.805651 | 1.20E-49 | -1.69E-46 |
| MS.gene060011 | MS.gene84326 | 0.835055 | 2.10E-56 | -1.69E-46 |
| MS.gene060137 | MS.gene84326 | -0.820542 | 6.49E-53 | -1.69E-46 |
| MS.gene060167 | MS.gene84326 | 0.821501 | 3.90E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene84326 | 0.864735 | 9.82E-65 | -1.69E-46 |
| MS.gene06052 | MS.gene84326 | 0.85308 | 3.03E-61 | -1.69E-46 |
| MS.gene060572 | MS.gene84326 | 0.844475 | 7.39E-59 | -1.69E-46 |
| MS.gene060683 | MS.gene84326 | 0.851597 | 8.00E-61 | -1.69E-46 |
| MS.gene060685 | MS.gene84326 | 0.847059 | 1.47E-59 | -1.69E-46 |
| MS.gene060781 | MS.gene84326 | 0.812645 | 3.82E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene84326 | 0.834537 | 2.83E-56 | -1.69E-46 |
| MS.gene060803 | MS.gene84326 | 0.811067 | 8.43E-51 | -1.69E-46 |
| MS.gene060879 | MS.gene84326 | 0.805496 | 1.30E-49 | -1.69E-46 |
| MS.gene060942 | MS.gene84326 | 0.818831 | 1.60E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene84326 | 0.860048 | 2.71E-63 | -1.69E-46 |
| MS.gene061002 | MS.gene84326 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene84326 | -0.804658 | 1.94E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene84326 | -0.833741 | 4.48E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84326.t1 | MTR_2g086450 | 98.396 | 374 | 4 | 2 | 1 | 373 | 17 | 389 | 0.0 | 748 |
| MS.gene84326.t1 | MTR_6g032990 | 50.000 | 402 | 111 | 14 | 22 | 373 | 35 | 396 | 7.87e-105 | 314 |
| MS.gene84326.t1 | MTR_5g041350 | 52.941 | 204 | 87 | 1 | 22 | 225 | 8 | 202 | 3.81e-67 | 216 |
| MS.gene84326.t1 | MTR_4g081710 | 53.623 | 207 | 82 | 4 | 22 | 225 | 10 | 205 | 2.12e-63 | 206 |
| MS.gene84326.t1 | MTR_6g444980 | 56.395 | 172 | 55 | 5 | 19 | 189 | 25 | 177 | 2.98e-53 | 181 |
| MS.gene84326.t1 | MTR_5g027440 | 50.802 | 187 | 81 | 4 | 22 | 208 | 18 | 193 | 7.72e-52 | 174 |
| MS.gene84326.t1 | MTR_6g444980 | 57.051 | 156 | 47 | 5 | 19 | 173 | 25 | 161 | 2.66e-47 | 164 |
| MS.gene84326.t1 | MTR_7g088070 | 43.655 | 197 | 84 | 3 | 28 | 221 | 49 | 221 | 2.65e-43 | 152 |
| MS.gene84326.t1 | MTR_7g088070 | 44.670 | 197 | 86 | 5 | 28 | 221 | 49 | 225 | 9.09e-43 | 150 |
| MS.gene84326.t1 | MTR_2g027800 | 40.079 | 252 | 123 | 9 | 11 | 245 | 19 | 259 | 6.37e-41 | 146 |
| MS.gene84326.t1 | MTR_2g027860 | 46.023 | 176 | 72 | 3 | 11 | 184 | 31 | 185 | 1.61e-40 | 146 |
| MS.gene84326.t1 | MTR_7g098250 | 45.251 | 179 | 72 | 4 | 5 | 178 | 233 | 390 | 2.13e-39 | 146 |
| MS.gene84326.t1 | MTR_2g027800 | 38.889 | 252 | 112 | 8 | 11 | 245 | 19 | 245 | 7.10e-39 | 140 |
| MS.gene84326.t1 | MTR_1g053835 | 43.850 | 187 | 73 | 5 | 11 | 188 | 236 | 399 | 7.73e-38 | 141 |
| MS.gene84326.t1 | MTR_1g090670 | 41.026 | 195 | 102 | 4 | 11 | 205 | 26 | 207 | 2.28e-37 | 137 |
| MS.gene84326.t1 | MTR_1g080330 | 43.293 | 164 | 72 | 2 | 15 | 178 | 161 | 303 | 1.24e-36 | 137 |
| MS.gene84326.t1 | MTR_7g093030 | 43.871 | 155 | 65 | 3 | 28 | 182 | 211 | 343 | 1.16e-34 | 131 |
| MS.gene84326.t1 | MTR_7g115530 | 43.590 | 156 | 66 | 3 | 29 | 184 | 218 | 351 | 5.04e-34 | 130 |
| MS.gene84326.t1 | MTR_1g080330 | 41.958 | 143 | 62 | 2 | 15 | 157 | 161 | 282 | 1.72e-28 | 112 |
| MS.gene84326.t1 | MTR_7g068600 | 43.506 | 154 | 63 | 5 | 25 | 175 | 9 | 141 | 1.07e-27 | 109 |
| MS.gene84326.t1 | MTR_7g115530 | 42.636 | 129 | 53 | 2 | 29 | 157 | 218 | 325 | 6.26e-26 | 106 |
| MS.gene84326.t1 | MTR_1g053800 | 38.372 | 172 | 84 | 6 | 17 | 188 | 165 | 314 | 3.57e-25 | 104 |
| MS.gene84326.t1 | MTR_5g041350 | 53.846 | 91 | 42 | 0 | 135 | 225 | 1 | 91 | 1.45e-24 | 100 |
| MS.gene84326.t1 | MTR_5g041350 | 52.688 | 93 | 44 | 0 | 133 | 225 | 21 | 113 | 2.59e-24 | 100 |
| MS.gene84326.t1 | MTR_7g115530 | 64.912 | 57 | 20 | 0 | 29 | 85 | 218 | 274 | 1.85e-21 | 94.0 |
| MS.gene84326.t1 | MTR_7g115530 | 64.912 | 57 | 20 | 0 | 29 | 85 | 218 | 274 | 7.84e-21 | 92.8 |
| MS.gene84326.t1 | MTR_7g093030 | 60.345 | 58 | 23 | 0 | 28 | 85 | 211 | 268 | 4.18e-20 | 89.7 |
| MS.gene84326.t1 | MTR_1g053830 | 52.381 | 63 | 30 | 0 | 25 | 87 | 14 | 76 | 7.18e-20 | 84.0 |
| MS.gene84326.t1 | MTR_7g115530 | 67.308 | 52 | 17 | 0 | 29 | 80 | 218 | 269 | 3.42e-19 | 87.0 |
| MS.gene84326.t1 | MTR_7g069660 | 62.500 | 56 | 21 | 0 | 30 | 85 | 72 | 127 | 1.80e-18 | 85.9 |
| MS.gene84326.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 29 | 79 | 218 | 268 | 2.41e-18 | 84.7 |
| MS.gene84326.t1 | MTR_2g023580 | 64.151 | 53 | 19 | 0 | 30 | 82 | 56 | 108 | 7.56e-18 | 82.4 |
| MS.gene84326.t1 | MTR_2g084230 | 52.778 | 72 | 32 | 1 | 14 | 85 | 84 | 153 | 9.32e-17 | 81.3 |
| MS.gene84326.t1 | MTR_2g084230 | 52.778 | 72 | 32 | 1 | 14 | 85 | 84 | 153 | 1.02e-16 | 80.5 |
| MS.gene84326.t1 | MTR_8g086410 | 58.929 | 56 | 23 | 0 | 30 | 85 | 112 | 167 | 1.98e-16 | 80.5 |
| MS.gene84326.t1 | MTR_8g086410 | 58.929 | 56 | 23 | 0 | 30 | 85 | 110 | 165 | 2.02e-16 | 80.5 |
| MS.gene84326.t1 | MTR_1g112370 | 62.264 | 53 | 20 | 0 | 30 | 82 | 23 | 75 | 3.24e-16 | 79.3 |
| MS.gene84326.t1 | MTR_3g450310 | 50.794 | 63 | 28 | 1 | 29 | 91 | 19 | 78 | 3.44e-16 | 77.0 |
| MS.gene84326.t1 | MTR_0223s0040 | 60.377 | 53 | 21 | 0 | 30 | 82 | 19 | 71 | 5.59e-16 | 77.8 |
| MS.gene84326.t1 | MTR_6g071625 | 53.125 | 64 | 30 | 0 | 30 | 93 | 203 | 266 | 1.15e-15 | 77.8 |
| MS.gene84326.t1 | MTR_4g021790 | 52.174 | 69 | 31 | 2 | 16 | 83 | 154 | 221 | 1.34e-15 | 76.6 |
| MS.gene84326.t1 | MTR_2g016220 | 57.143 | 56 | 24 | 0 | 30 | 85 | 90 | 145 | 2.61e-15 | 77.0 |
| MS.gene84326.t1 | MTR_2g016220 | 57.143 | 56 | 24 | 0 | 30 | 85 | 90 | 145 | 2.64e-15 | 77.0 |
| MS.gene84326.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 30 | 85 | 220 | 275 | 4.40e-15 | 76.6 |
| MS.gene84326.t1 | MTR_3g064840 | 58.929 | 56 | 23 | 0 | 30 | 85 | 275 | 330 | 6.44e-15 | 76.3 |
| MS.gene84326.t1 | MTR_8g086410 | 56.604 | 53 | 23 | 0 | 30 | 82 | 112 | 164 | 7.38e-15 | 75.9 |
| MS.gene84326.t1 | MTR_1g021520 | 44.318 | 88 | 42 | 2 | 30 | 110 | 127 | 214 | 1.50e-14 | 73.9 |
| MS.gene84326.t1 | MTR_8g066310 | 57.143 | 56 | 24 | 0 | 30 | 85 | 174 | 229 | 3.85e-14 | 73.2 |
| MS.gene84326.t1 | MTR_1g090670 | 34.483 | 145 | 82 | 4 | 61 | 205 | 1 | 132 | 4.69e-14 | 71.2 |
| MS.gene84326.t1 | MTR_2g034960 | 55.932 | 59 | 25 | 1 | 25 | 83 | 207 | 264 | 4.84e-14 | 73.9 |
| MS.gene84326.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 107 | 164 | 6.71e-14 | 73.6 |
| MS.gene84326.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 211 | 268 | 7.64e-14 | 73.2 |
| MS.gene84326.t1 | MTR_4g121020 | 55.932 | 59 | 25 | 1 | 25 | 83 | 211 | 268 | 7.84e-14 | 73.2 |
| MS.gene84326.t1 | MTR_4g021855 | 56.364 | 55 | 23 | 1 | 29 | 83 | 168 | 221 | 9.97e-14 | 71.6 |
| MS.gene84326.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 25 | 83 | 209 | 266 | 1.07e-13 | 72.8 |
| MS.gene84326.t1 | MTR_2g450070 | 54.237 | 59 | 26 | 1 | 25 | 83 | 209 | 266 | 1.12e-13 | 72.8 |
| MS.gene84326.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 30 | 79 | 90 | 139 | 1.26e-13 | 72.0 |
| MS.gene84326.t1 | MTR_7g093010 | 33.333 | 147 | 76 | 3 | 28 | 173 | 212 | 337 | 2.05e-13 | 71.2 |
| MS.gene84326.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 25 | 83 | 127 | 184 | 2.87e-13 | 71.2 |
| MS.gene84326.t1 | MTR_1g032570 | 52.542 | 59 | 27 | 1 | 25 | 83 | 196 | 253 | 3.30e-13 | 71.2 |
| MS.gene84326.t1 | MTR_4g021760 | 55.556 | 54 | 23 | 1 | 29 | 82 | 169 | 221 | 4.59e-13 | 69.7 |
| MS.gene84326.t1 | MTR_4g064730 | 43.333 | 90 | 49 | 2 | 26 | 114 | 128 | 216 | 6.71e-13 | 69.3 |
| MS.gene84326.t1 | MTR_7g089010 | 58.182 | 55 | 22 | 1 | 29 | 83 | 91 | 144 | 8.89e-13 | 68.6 |
| MS.gene84326.t1 | MTR_4g113140 | 55.172 | 58 | 26 | 0 | 26 | 83 | 232 | 289 | 1.30e-12 | 68.9 |
| MS.gene84326.t1 | MTR_1g093080 | 56.364 | 55 | 24 | 0 | 29 | 83 | 211 | 265 | 1.40e-12 | 68.6 |
| MS.gene84326.t1 | MTR_4g021845 | 56.863 | 51 | 21 | 1 | 29 | 79 | 168 | 217 | 2.45e-12 | 66.2 |
| MS.gene84326.t1 | MTR_4g086835 | 53.448 | 58 | 27 | 0 | 26 | 83 | 271 | 328 | 5.06e-12 | 67.4 |
| MS.gene84326.t1 | MTR_1g013170 | 56.364 | 55 | 23 | 1 | 29 | 83 | 191 | 244 | 5.58e-12 | 67.4 |
| MS.gene84326.t1 | MTR_5g017980 | 44.737 | 76 | 42 | 0 | 29 | 104 | 193 | 268 | 8.14e-12 | 66.2 |
| MS.gene84326.t1 | MTR_4g131600 | 50.847 | 59 | 28 | 1 | 25 | 83 | 197 | 254 | 1.09e-11 | 66.6 |
| MS.gene84326.t1 | MTR_4g078810 | 53.704 | 54 | 24 | 1 | 29 | 82 | 158 | 210 | 1.10e-11 | 66.2 |
| MS.gene84326.t1 | MTR_8g079940 | 46.667 | 75 | 33 | 2 | 29 | 97 | 209 | 282 | 1.49e-11 | 66.2 |
| MS.gene84326.t1 | MTR_4g131570 | 53.333 | 60 | 27 | 1 | 25 | 84 | 199 | 257 | 1.62e-11 | 66.2 |
| MS.gene84326.t1 | MTR_2g090675 | 53.846 | 52 | 23 | 1 | 31 | 82 | 163 | 213 | 1.86e-11 | 65.5 |
| MS.gene84326.t1 | MTR_5g054300 | 38.947 | 95 | 49 | 2 | 12 | 106 | 186 | 271 | 2.92e-11 | 64.7 |
| MS.gene84326.t1 | MTR_7g026400 | 52.727 | 55 | 25 | 1 | 29 | 83 | 157 | 210 | 3.19e-11 | 65.1 |
| MS.gene84326.t1 | MTR_4g131580 | 53.333 | 60 | 27 | 1 | 25 | 84 | 196 | 254 | 4.58e-11 | 64.7 |
| MS.gene84326.t1 | MTR_3g086100 | 49.153 | 59 | 29 | 1 | 25 | 83 | 124 | 181 | 4.94e-11 | 64.3 |
| MS.gene84326.t1 | MTR_3g106220 | 49.153 | 59 | 29 | 1 | 25 | 83 | 194 | 251 | 4.95e-11 | 64.7 |
| MS.gene84326.t1 | MTR_3g086100 | 49.153 | 59 | 29 | 1 | 25 | 83 | 195 | 252 | 5.93e-11 | 64.3 |
| MS.gene84326.t1 | MTR_4g086835 | 53.448 | 58 | 26 | 1 | 26 | 83 | 271 | 327 | 7.68e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84326.t1 | AT3G04030 | 54.040 | 396 | 140 | 12 | 1 | 373 | 18 | 394 | 2.85e-122 | 358 |
| MS.gene84326.t1 | AT3G04030 | 53.535 | 396 | 141 | 13 | 1 | 373 | 18 | 393 | 5.14e-119 | 350 |
| MS.gene84326.t1 | AT5G18240 | 52.840 | 405 | 139 | 15 | 1 | 373 | 18 | 402 | 1.68e-118 | 349 |
| MS.gene84326.t1 | AT5G18240 | 52.840 | 405 | 139 | 15 | 1 | 373 | 18 | 402 | 1.68e-118 | 349 |
| MS.gene84326.t1 | AT5G18240 | 52.346 | 405 | 139 | 16 | 1 | 373 | 18 | 400 | 4.47e-115 | 340 |
| MS.gene84326.t1 | AT3G04030 | 52.525 | 396 | 140 | 13 | 1 | 373 | 18 | 388 | 7.89e-115 | 339 |
| MS.gene84326.t1 | AT5G18240 | 50.864 | 405 | 141 | 15 | 1 | 373 | 18 | 396 | 3.95e-111 | 330 |
| MS.gene84326.t1 | AT5G18240 | 50.864 | 405 | 141 | 15 | 1 | 373 | 18 | 396 | 3.95e-111 | 330 |
| MS.gene84326.t1 | AT3G04030 | 49.107 | 336 | 130 | 11 | 61 | 373 | 1 | 318 | 2.61e-83 | 256 |
| MS.gene84326.t1 | AT3G04030 | 47.321 | 336 | 130 | 12 | 61 | 373 | 1 | 312 | 4.58e-76 | 238 |
| MS.gene84326.t1 | AT5G18240 | 46.377 | 345 | 128 | 15 | 61 | 373 | 1 | 320 | 4.71e-72 | 228 |
| MS.gene84326.t1 | AT1G69580 | 53.333 | 210 | 91 | 2 | 15 | 222 | 20 | 224 | 4.01e-65 | 210 |
| MS.gene84326.t1 | AT1G69580 | 53.110 | 209 | 92 | 2 | 15 | 222 | 20 | 223 | 1.38e-64 | 209 |
| MS.gene84326.t1 | AT4G13640 | 47.244 | 254 | 111 | 6 | 19 | 258 | 27 | 271 | 1.76e-61 | 199 |
| MS.gene84326.t1 | AT3G24120 | 49.528 | 212 | 86 | 2 | 3 | 208 | 15 | 211 | 3.95e-60 | 196 |
| MS.gene84326.t1 | AT4G13640 | 46.693 | 257 | 111 | 7 | 19 | 258 | 27 | 274 | 2.47e-59 | 194 |
| MS.gene84326.t1 | AT3G24120 | 48.837 | 215 | 86 | 3 | 3 | 208 | 15 | 214 | 4.49e-58 | 191 |
| MS.gene84326.t1 | AT1G79430 | 54.706 | 170 | 59 | 3 | 19 | 188 | 24 | 175 | 1.23e-52 | 179 |
| MS.gene84326.t1 | AT5G45580 | 44.949 | 198 | 86 | 3 | 14 | 203 | 8 | 190 | 1.73e-47 | 163 |
| MS.gene84326.t1 | AT3G12730 | 50.595 | 168 | 64 | 4 | 18 | 182 | 12 | 163 | 3.40e-46 | 158 |
| MS.gene84326.t1 | AT5G45580 | 45.503 | 189 | 80 | 3 | 23 | 203 | 1 | 174 | 9.96e-46 | 157 |
| MS.gene84326.t1 | AT2G01060 | 47.024 | 168 | 66 | 4 | 28 | 192 | 14 | 161 | 3.17e-41 | 147 |
| MS.gene84326.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 187 | 322 | 8.08e-37 | 137 |
| MS.gene84326.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 187 | 322 | 8.08e-37 | 137 |
| MS.gene84326.t1 | AT5G29000 | 44.805 | 154 | 67 | 2 | 28 | 181 | 230 | 365 | 1.59e-36 | 137 |
| MS.gene84326.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 194 | 332 | 4.49e-36 | 135 |
| MS.gene84326.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 194 | 332 | 4.49e-36 | 135 |
| MS.gene84326.t1 | AT3G04450 | 44.586 | 157 | 69 | 2 | 25 | 181 | 234 | 372 | 6.71e-36 | 136 |
| MS.gene84326.t1 | AT4G28610 | 38.462 | 208 | 105 | 5 | 28 | 235 | 224 | 408 | 9.72e-36 | 135 |
| MS.gene84326.t1 | AT5G06800 | 45.455 | 154 | 65 | 2 | 29 | 181 | 192 | 327 | 9.98e-35 | 132 |
| MS.gene84326.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene84326.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene84326.t1 | AT3G13040 | 44.654 | 159 | 67 | 3 | 29 | 185 | 241 | 380 | 7.44e-34 | 130 |
| MS.gene84326.t1 | AT5G06800 | 44.444 | 153 | 63 | 2 | 29 | 181 | 192 | 322 | 3.07e-33 | 127 |
| MS.gene84326.t1 | AT2G20400 | 40.854 | 164 | 69 | 3 | 31 | 194 | 233 | 368 | 6.66e-31 | 121 |
| MS.gene84326.t1 | AT2G20400 | 40.854 | 164 | 70 | 4 | 31 | 194 | 233 | 369 | 9.81e-31 | 121 |
| MS.gene84326.t1 | AT1G79430 | 48.438 | 128 | 48 | 3 | 61 | 188 | 1 | 110 | 1.70e-26 | 107 |
| MS.gene84326.t1 | AT2G01060 | 43.939 | 132 | 51 | 4 | 64 | 192 | 1 | 112 | 1.36e-23 | 98.2 |
| MS.gene84326.t1 | AT3G12730 | 44.800 | 125 | 50 | 4 | 61 | 182 | 1 | 109 | 8.47e-22 | 92.0 |
| MS.gene84326.t1 | AT3G04450 | 60.656 | 61 | 24 | 0 | 25 | 85 | 234 | 294 | 3.92e-21 | 93.2 |
| MS.gene84326.t1 | AT5G29000 | 57.746 | 71 | 28 | 1 | 28 | 98 | 230 | 298 | 4.98e-21 | 92.8 |
| MS.gene84326.t1 | AT5G06800 | 61.017 | 59 | 23 | 0 | 29 | 87 | 192 | 250 | 8.62e-20 | 88.6 |
| MS.gene84326.t1 | AT2G06020 | 48.193 | 83 | 39 | 2 | 11 | 89 | 65 | 147 | 2.19e-18 | 85.1 |
| MS.gene84326.t1 | AT2G38300 | 55.072 | 69 | 30 | 1 | 30 | 98 | 55 | 122 | 5.84e-18 | 84.3 |
| MS.gene84326.t1 | AT2G42660 | 58.065 | 62 | 25 | 1 | 30 | 91 | 51 | 111 | 1.30e-17 | 82.0 |
| MS.gene84326.t1 | AT1G14600 | 60.714 | 56 | 22 | 0 | 30 | 85 | 24 | 79 | 4.92e-17 | 80.5 |
| MS.gene84326.t1 | AT4G04605 | 60.377 | 53 | 21 | 0 | 30 | 82 | 15 | 67 | 9.17e-17 | 79.0 |
| MS.gene84326.t1 | AT2G40260 | 58.929 | 56 | 23 | 0 | 30 | 85 | 83 | 138 | 1.27e-16 | 81.3 |
| MS.gene84326.t1 | AT2G02060 | 62.264 | 53 | 20 | 0 | 30 | 82 | 30 | 82 | 1.73e-16 | 79.0 |
| MS.gene84326.t1 | AT2G02060 | 62.264 | 53 | 20 | 0 | 30 | 82 | 30 | 82 | 1.73e-16 | 79.0 |
| MS.gene84326.t1 | AT5G42630 | 55.072 | 69 | 30 | 1 | 17 | 85 | 94 | 161 | 8.20e-16 | 76.3 |
| MS.gene84326.t1 | AT5G16560 | 58.929 | 56 | 23 | 0 | 30 | 85 | 220 | 275 | 1.45e-15 | 77.8 |
| MS.gene84326.t1 | AT4G04580 | 54.717 | 53 | 24 | 0 | 30 | 82 | 15 | 67 | 1.66e-15 | 73.9 |
| MS.gene84326.t1 | AT5G42630 | 55.072 | 69 | 30 | 1 | 17 | 85 | 94 | 161 | 2.13e-15 | 76.3 |
| MS.gene84326.t1 | AT1G32240 | 58.929 | 56 | 23 | 0 | 30 | 85 | 214 | 269 | 2.27e-15 | 77.0 |
| MS.gene84326.t1 | AT1G32240 | 58.929 | 56 | 23 | 0 | 30 | 85 | 214 | 269 | 2.40e-15 | 77.0 |
| MS.gene84326.t1 | AT4G17695 | 51.562 | 64 | 31 | 0 | 30 | 93 | 165 | 228 | 6.42e-15 | 75.5 |
| MS.gene84326.t1 | AT5G05090 | 58.182 | 55 | 22 | 1 | 29 | 83 | 81 | 134 | 2.66e-13 | 69.7 |
| MS.gene84326.t1 | AT5G59570 | 55.172 | 58 | 25 | 1 | 26 | 83 | 138 | 194 | 3.04e-13 | 70.1 |
| MS.gene84326.t1 | AT5G59570 | 55.172 | 58 | 25 | 1 | 26 | 83 | 138 | 194 | 3.04e-13 | 70.1 |
| MS.gene84326.t1 | AT2G40970 | 56.897 | 58 | 24 | 1 | 26 | 83 | 102 | 158 | 3.64e-13 | 69.3 |
| MS.gene84326.t1 | AT5G45580 | 34.074 | 135 | 66 | 3 | 77 | 203 | 16 | 135 | 4.48e-13 | 68.6 |
| MS.gene84326.t1 | AT3G10760 | 50.000 | 70 | 34 | 1 | 14 | 83 | 90 | 158 | 4.92e-13 | 69.7 |
| MS.gene84326.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 167 | 220 | 5.89e-13 | 70.5 |
| MS.gene84326.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 237 | 290 | 6.49e-13 | 70.5 |
| MS.gene84326.t1 | AT3G16857 | 54.545 | 55 | 24 | 1 | 29 | 83 | 237 | 290 | 6.60e-13 | 70.5 |
| MS.gene84326.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 8.46e-13 | 68.9 |
| MS.gene84326.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 1.01e-12 | 68.9 |
| MS.gene84326.t1 | AT3G46640 | 56.364 | 55 | 23 | 1 | 29 | 83 | 144 | 197 | 1.01e-12 | 68.9 |
| MS.gene84326.t1 | AT2G03500 | 56.364 | 55 | 24 | 0 | 29 | 83 | 233 | 287 | 1.33e-12 | 68.9 |
| MS.gene84326.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 135 | 198 | 3.22e-12 | 67.4 |
| MS.gene84326.t1 | AT1G25550 | 56.364 | 55 | 24 | 0 | 29 | 83 | 209 | 263 | 3.34e-12 | 67.4 |
| MS.gene84326.t1 | AT5G58080 | 51.471 | 68 | 32 | 1 | 16 | 83 | 181 | 247 | 4.14e-12 | 68.2 |
| MS.gene84326.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 200 | 263 | 5.05e-12 | 67.0 |
| MS.gene84326.t1 | AT2G01760 | 49.231 | 65 | 31 | 2 | 29 | 92 | 228 | 291 | 6.56e-12 | 67.0 |
| MS.gene84326.t1 | AT2G20570 | 55.769 | 52 | 22 | 1 | 31 | 82 | 155 | 205 | 2.07e-11 | 65.5 |
| MS.gene84326.t1 | AT2G20570 | 55.769 | 52 | 22 | 1 | 31 | 82 | 171 | 221 | 2.25e-11 | 65.5 |
| MS.gene84326.t1 | AT1G49560 | 44.048 | 84 | 44 | 1 | 29 | 109 | 192 | 275 | 2.70e-11 | 64.7 |
| MS.gene84326.t1 | AT3G25790 | 38.202 | 89 | 55 | 0 | 34 | 122 | 201 | 289 | 3.14e-11 | 64.7 |
| MS.gene84326.t1 | AT5G44190 | 50.000 | 54 | 26 | 1 | 29 | 82 | 147 | 199 | 3.37e-11 | 64.7 |
| MS.gene84326.t1 | AT5G44190 | 50.000 | 54 | 26 | 1 | 29 | 82 | 147 | 199 | 4.45e-11 | 63.9 |
| MS.gene84326.t1 | AT3G62670 | 48.438 | 64 | 29 | 1 | 25 | 84 | 207 | 270 | 4.72e-11 | 64.3 |
| MS.gene84326.t1 | AT1G68670 | 53.448 | 58 | 27 | 0 | 26 | 83 | 212 | 269 | 5.34e-11 | 63.9 |
Find 59 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTCAAAATGGAGGGTT+TGG | 0.270343 | 2.2:+12141931 | MS.gene84326:CDS |
| ACACTTGGTAGACAGAATTT+AGG | 0.292229 | 2.2:+12141724 | MS.gene84326:CDS |
| ATGCAAAACCTAGATTAAAA+TGG | 0.295286 | 2.2:+12140662 | MS.gene84326:CDS |
| AAAACAATGAAGTACTAAAA+TGG | 0.316678 | 2.2:+12142046 | MS.gene84326:CDS |
| GGAAATGGTTCTAGTGATTC+AGG | 0.325156 | 2.2:+12140622 | MS.gene84326:CDS |
| GTTGAGAATCATTCAGATAT+TGG | 0.332253 | 2.2:+12142168 | MS.gene84326:CDS |
| GAACAAGAAATCATTCAAAA+TGG | 0.339387 | 2.2:+12141922 | MS.gene84326:CDS |
| AAATAACAACCATGTGTTCA+TGG | 0.356068 | 2.2:+12141972 | MS.gene84326:CDS |
| ATGACTCTTTAAATGATATA+AGG | 0.363326 | 2.2:-12140906 | None:intergenic |
| TAGAACCATTTCCTGTTTGA+AGG | 0.369263 | 2.2:-12140612 | None:intergenic |
| GTAAACAACTTGATTTGAAT+AGG | 0.370306 | 2.2:+12142265 | MS.gene84326:CDS |
| ATGAAACTCATGGGAATTCC+AGG | 0.370323 | 2.2:+12140878 | MS.gene84326:CDS |
| ACAAAGGAACACTGCAAGAT+TGG | 0.379529 | 2.2:+12142200 | MS.gene84326:CDS |
| AGACAGAATTTAGGAATAGT+AGG | 0.380211 | 2.2:+12141733 | MS.gene84326:CDS |
| TCATTTAAAGAGTCATCTTC+AGG | 0.380557 | 2.2:+12140913 | MS.gene84326:CDS |
| ATGTTCCTTCAAACAGGAAA+TGG | 0.408546 | 2.2:+12140607 | MS.gene84326:CDS |
| TTTATTCATGTGAGTTCCAT+TGG | 0.431480 | 2.2:-12141208 | None:intergenic |
| CTTTCTCAAGCACTGATTGA+AGG | 0.431720 | 2.2:-12141693 | None:intergenic |
| TTGATTTGAATAGGTTCAGT+TGG | 0.449179 | 2.2:+12142274 | MS.gene84326:CDS |
| ATAAACCTTGCATGAAGATC+AGG | 0.452639 | 2.2:-12140688 | None:intergenic |
| CTGTCCATCGAGCCGTCGTT+TGG | 0.455742 | 2.2:-12141865 | None:intergenic |
| CTTTCCTTTCCATGAACACA+TGG | 0.455778 | 2.2:-12141981 | None:intergenic |
| ATCGAGCCGTCGTTTGGTTG+AGG | 0.465457 | 2.2:-12141859 | None:intergenic |
| AGGCACATGTTCCTTCAAAC+AGG | 0.475299 | 2.2:+12140601 | MS.gene84326:CDS |
| AATGAATTAGAAAGAAATCA+TGG | 0.479388 | 2.2:+12142123 | MS.gene84326:CDS |
| TACAAAGACACTTGCAGCTA+AGG | 0.482388 | 2.2:+12141650 | MS.gene84326:CDS |
| GGAAATTTGTCTATGAACAT+TGG | 0.485289 | 2.2:+12142144 | MS.gene84326:CDS |
| ATAGAAGCAGTTAATCAGTT+AGG | 0.490373 | 2.2:+12140709 | MS.gene84326:CDS |
| CACATGAATAAATTAACACT+TGG | 0.490644 | 2.2:+12141219 | MS.gene84326:CDS |
| ATCGTCTGACCGATCACAAA+AGG | 0.496813 | 2.2:+12141900 | MS.gene84326:CDS |
| GACAGAATTTAGGAATAGTA+GGG | 0.543038 | 2.2:+12141734 | MS.gene84326:CDS |
| CAAGAAATCATTCAAAATGG+AGG | 0.547960 | 2.2:+12141925 | MS.gene84326:CDS |
| AAATGATATAAGGTAAGCCC+TGG | 0.549274 | 2.2:-12140896 | None:intergenic |
| AAGAAATCATTCAAAATGGA+GGG | 0.551325 | 2.2:+12141926 | MS.gene84326:CDS |
| CAACAAGCAACTGAATTAGC+AGG | 0.559201 | 2.2:+12142006 | MS.gene84326:CDS |
| GGCGCTGCAAATGCAGATTG+AGG | 0.562019 | 2.2:+12141393 | MS.gene84326:CDS |
| TCAACCAAACGACGGCTCGA+TGG | 0.568429 | 2.2:+12141861 | MS.gene84326:CDS |
| AATTCATTATTATTTCCTAA+CGG | 0.568566 | 2.2:-12142108 | None:intergenic |
| TCAGAGATGAAAGAGTTACA+AGG | 0.580642 | 2.2:+12141829 | MS.gene84326:CDS |
| ACAACCATGTGTTCATGGAA+AGG | 0.581829 | 2.2:+12141977 | MS.gene84326:CDS |
| GAGAGACTTTCTGAAACCAA+TGG | 0.583065 | 2.2:+12141192 | MS.gene84326:CDS |
| TTGTTGTTGTTATTAGTCTG+TGG | 0.584414 | 2.2:-12141243 | None:intergenic |
| AAAACAGTAATGAAACTCAT+GGG | 0.594613 | 2.2:+12140869 | MS.gene84326:CDS |
| AGGAACATGTGCCTCTCAGA+TGG | 0.596232 | 2.2:-12140592 | None:intergenic |
| AAGACTCAATGAACAACTTG+AGG | 0.597565 | 2.2:+12141423 | MS.gene84326:CDS |
| AGATTAAGCAAGAATCTGCA+TGG | 0.602970 | 2.2:+12141019 | MS.gene84326:CDS |
| GAGAAAGCTCAAGAAACACT+TGG | 0.604326 | 2.2:+12141709 | MS.gene84326:CDS |
| CAGCTAAGGATAGAAGCTCA+AGG | 0.609742 | 2.2:+12141664 | MS.gene84326:CDS |
| AGTCGTGGAGATAACAATGA+AGG | 0.610907 | 2.2:+12142231 | MS.gene84326:CDS |
| GGACACCTGATCTTCATGCA+AGG | 0.639163 | 2.2:+12140683 | MS.gene84326:CDS |
| GAAGCAGTTAATCAGTTAGG+CGG | 0.649355 | 2.2:+12140712 | MS.gene84326:CDS |
| AGATTGGATCTAAACAGTCG+TGG | 0.649789 | 2.2:+12142216 | MS.gene84326:CDS |
| TGAAACTCATGGGAATTCCA+GGG | 0.657200 | 2.2:+12140879 | MS.gene84326:CDS |
| TGTTGAATTCAGACACTGTG+AGG | 0.662262 | 2.2:-12141803 | None:intergenic |
| TAGAGATTTACACATAAGCG+AGG | 0.677842 | 2.2:+12141372 | MS.gene84326:intron |
| AGTTAATCAGTTAGGCGGAG+CGG | 0.682383 | 2.2:+12140717 | MS.gene84326:CDS |
| AGTACTAAAATGGTGTGTTG+AGG | 0.684708 | 2.2:+12142056 | MS.gene84326:CDS |
| GAATGTCAATACCATCTGAG+AGG | 0.692919 | 2.2:+12140581 | None:intergenic |
| ATATTGGTGAGTTTCAACAA+AGG | 0.741956 | 2.2:+12142184 | MS.gene84326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCATTATTATTTCCTAA+CGG | - | chr2.2:12142111-12142130 | None:intergenic | 15.0% |
| !! | AATGAATTAGAAAGAAATCA+TGG | + | chr2.2:12142123-12142142 | MS.gene84326:CDS | 20.0% |
| !! | ATGACTCTTTAAATGATATA+AGG | - | chr2.2:12140909-12140928 | None:intergenic | 20.0% |
| !!! | AAAACAATGAAGTACTAAAA+TGG | + | chr2.2:12142046-12142065 | MS.gene84326:CDS | 20.0% |
| !!! | ATGAAGAGTGTAATTAAAAA+AGG | - | chr2.2:12141285-12141304 | None:intergenic | 20.0% |
| !!! | TGAAGAGTGTAATTAAAAAA+GGG | - | chr2.2:12141284-12141303 | None:intergenic | 20.0% |
| !!! | TTAGTACTTCATTGTTTTTA+AGG | - | chr2.2:12142044-12142063 | None:intergenic | 20.0% |
| !!! | TTTTTTTACCATACTTTGTA+TGG | + | chr2.2:12140954-12140973 | MS.gene84326:intron | 20.0% |
| ! | AAAAACAGTAATGAAACTCA+TGG | + | chr2.2:12140868-12140887 | MS.gene84326:CDS | 25.0% |
| ! | AAAACAGTAATGAAACTCAT+GGG | + | chr2.2:12140869-12140888 | MS.gene84326:CDS | 25.0% |
| ! | AAGAAATCATTCAAAATGGA+GGG | + | chr2.2:12141926-12141945 | MS.gene84326:CDS | 25.0% |
| ! | ATGCAAAACCTAGATTAAAA+TGG | + | chr2.2:12140662-12140681 | MS.gene84326:CDS | 25.0% |
| ! | ATGTGTAAATCTCTATCAAA+AGG | - | chr2.2:12141367-12141386 | None:intergenic | 25.0% |
| ! | CACATGAATAAATTAACACT+TGG | + | chr2.2:12141219-12141238 | MS.gene84326:CDS | 25.0% |
| ! | GAACAAGAAATCATTCAAAA+TGG | + | chr2.2:12141922-12141941 | MS.gene84326:CDS | 25.0% |
| ! | TGTGTAAATCTCTATCAAAA+GGG | - | chr2.2:12141366-12141385 | None:intergenic | 25.0% |
| !! | ATGAGTTTCATTACTGTTTT+TGG | - | chr2.2:12140869-12140888 | None:intergenic | 25.0% |
| !! | ATTACAAACTCATTCTCTTT+TGG | + | chr2.2:12140759-12140778 | MS.gene84326:intron | 25.0% |
| !! | GTAAACAACTTGATTTGAAT+AGG | + | chr2.2:12142265-12142284 | MS.gene84326:CDS | 25.0% |
| AAACCAATATTCAAAACCTG+TGG | + | chr2.2:12141623-12141642 | MS.gene84326:intron | 30.0% | |
| AAATAACAACCATGTGTTCA+TGG | + | chr2.2:12141972-12141991 | MS.gene84326:CDS | 30.0% | |
| AGAAACAAAATTAACGCGTT+TGG | - | chr2.2:12141592-12141611 | None:intergenic | 30.0% | |
| AGACAGAATTTAGGAATAGT+AGG | + | chr2.2:12141733-12141752 | MS.gene84326:CDS | 30.0% | |
| ATAGAAGCAGTTAATCAGTT+AGG | + | chr2.2:12140709-12140728 | MS.gene84326:CDS | 30.0% | |
| ATATTGGTGAGTTTCAACAA+AGG | + | chr2.2:12142184-12142203 | MS.gene84326:CDS | 30.0% | |
| CAAGAAATCATTCAAAATGG+AGG | + | chr2.2:12141925-12141944 | MS.gene84326:CDS | 30.0% | |
| GACAGAATTTAGGAATAGTA+GGG | + | chr2.2:12141734-12141753 | MS.gene84326:CDS | 30.0% | |
| GGAAATTTGTCTATGAACAT+TGG | + | chr2.2:12142144-12142163 | MS.gene84326:CDS | 30.0% | |
| GTATAAAATCTTAGAGTGGT+AGG | - | chr2.2:12141331-12141350 | None:intergenic | 30.0% | |
| GTCAGTATAAAATCTTAGAG+TGG | - | chr2.2:12141335-12141354 | None:intergenic | 30.0% | |
| GTTGAGAATCATTCAGATAT+TGG | + | chr2.2:12142168-12142187 | MS.gene84326:CDS | 30.0% | |
| TAATTGCACCATACAAAGTA+TGG | - | chr2.2:12140965-12140984 | None:intergenic | 30.0% | |
| TCATTTAAAGAGTCATCTTC+AGG | + | chr2.2:12140913-12140932 | MS.gene84326:CDS | 30.0% | |
| TTTATTCATGTGAGTTCCAT+TGG | - | chr2.2:12141211-12141230 | None:intergenic | 30.0% | |
| ! | TTGATTTGAATAGGTTCAGT+TGG | + | chr2.2:12142274-12142293 | MS.gene84326:CDS | 30.0% |
| ! | TTGTTGTTGTTATTAGTCTG+TGG | - | chr2.2:12141246-12141265 | None:intergenic | 30.0% |
| ! | TTTCTTGTTCCTTTTGTGAT+CGG | - | chr2.2:12141912-12141931 | None:intergenic | 30.0% |
| !! | AAACTCATTCTCTTTTGGTT+TGG | + | chr2.2:12140764-12140783 | MS.gene84326:intron | 30.0% |
| AAATGATATAAGGTAAGCCC+TGG | - | chr2.2:12140899-12140918 | None:intergenic | 35.0% | |
| AAGACTCAATGAACAACTTG+AGG | + | chr2.2:12141423-12141442 | MS.gene84326:CDS | 35.0% | |
| ACACTTGGTAGACAGAATTT+AGG | + | chr2.2:12141724-12141743 | MS.gene84326:CDS | 35.0% | |
| AGATTAAGCAAGAATCTGCA+TGG | + | chr2.2:12141019-12141038 | MS.gene84326:CDS | 35.0% | |
| AGTACTAAAATGGTGTGTTG+AGG | + | chr2.2:12142056-12142075 | MS.gene84326:CDS | 35.0% | |
| ATAAACCTTGCATGAAGATC+AGG | - | chr2.2:12140691-12140710 | None:intergenic | 35.0% | |
| ATCATTCAAAATGGAGGGTT+TGG | + | chr2.2:12141931-12141950 | MS.gene84326:CDS | 35.0% | |
| ATGTTCCTTCAAACAGGAAA+TGG | + | chr2.2:12140607-12140626 | MS.gene84326:CDS | 35.0% | |
| TAGAACCATTTCCTGTTTGA+AGG | - | chr2.2:12140615-12140634 | None:intergenic | 35.0% | |
| TAGAGATTTACACATAAGCG+AGG | + | chr2.2:12141372-12141391 | MS.gene84326:intron | 35.0% | |
| TCAGAGATGAAAGAGTTACA+AGG | + | chr2.2:12141829-12141848 | MS.gene84326:CDS | 35.0% | |
| TCTTGCTTAATCTGTACTTC+TGG | - | chr2.2:12141012-12141031 | None:intergenic | 35.0% | |
| TTGCTTCTGCAATAGAAAGA+TGG | - | chr2.2:12140844-12140863 | None:intergenic | 35.0% | |
| ! | AGTAATTTTCTCACTCCGTT+AGG | + | chr2.2:12142093-12142112 | MS.gene84326:CDS | 35.0% |
| !! | TCAGGTGTCCATTTTAATCT+AGG | - | chr2.2:12140673-12140692 | None:intergenic | 35.0% |
| ACAAAGGAACACTGCAAGAT+TGG | + | chr2.2:12142200-12142219 | MS.gene84326:CDS | 40.0% | |
| ACAACCATGTGTTCATGGAA+AGG | + | chr2.2:12141977-12141996 | MS.gene84326:CDS | 40.0% | |
| AGATTGGATCTAAACAGTCG+TGG | + | chr2.2:12142216-12142235 | MS.gene84326:CDS | 40.0% | |
| AGTCGTGGAGATAACAATGA+AGG | + | chr2.2:12142231-12142250 | MS.gene84326:CDS | 40.0% | |
| ATGAAACTCATGGGAATTCC+AGG | + | chr2.2:12140878-12140897 | MS.gene84326:CDS | 40.0% | |
| CAACAAGCAACTGAATTAGC+AGG | + | chr2.2:12142006-12142025 | MS.gene84326:CDS | 40.0% | |
| CAATATTCAAAACCTGTGGC+AGG | + | chr2.2:12141627-12141646 | MS.gene84326:intron | 40.0% | |
| CTTTCCTTTCCATGAACACA+TGG | - | chr2.2:12141984-12142003 | None:intergenic | 40.0% | |
| GAAGCAGTTAATCAGTTAGG+CGG | + | chr2.2:12140712-12140731 | MS.gene84326:CDS | 40.0% | |
| GAGAAAGCTCAAGAAACACT+TGG | + | chr2.2:12141709-12141728 | MS.gene84326:CDS | 40.0% | |
| TACAAAGACACTTGCAGCTA+AGG | + | chr2.2:12141650-12141669 | MS.gene84326:CDS | 40.0% | |
| TCTATGTTACTCGAGATTCG+AGG | - | chr2.2:12140792-12140811 | None:intergenic | 40.0% | |
| TGAAACTCATGGGAATTCCA+GGG | + | chr2.2:12140879-12140898 | MS.gene84326:CDS | 40.0% | |
| TGTTGAATTCAGACACTGTG+AGG | - | chr2.2:12141806-12141825 | None:intergenic | 40.0% | |
| ! | CTGTACTTCTGGTGATGAAA+AGG | - | chr2.2:12141001-12141020 | None:intergenic | 40.0% |
| ! | GAACAACTTGAGGTGAGTTT+TGG | + | chr2.2:12141433-12141452 | MS.gene84326:intron | 40.0% |
| ! | TTTTGTCCTCAACCAAACGA+CGG | + | chr2.2:12141853-12141872 | MS.gene84326:CDS | 40.0% |
| !! | CTTTCTCAAGCACTGATTGA+AGG | - | chr2.2:12141696-12141715 | None:intergenic | 40.0% |
| !! | GAGAGACTTTCTGAAACCAA+TGG | + | chr2.2:12141192-12141211 | MS.gene84326:CDS | 40.0% |
| !! | GGAAATGGTTCTAGTGATTC+AGG | + | chr2.2:12140622-12140641 | MS.gene84326:CDS | 40.0% |
| !!! | CTGCCACAGGTTTTGAATAT+TGG | - | chr2.2:12141629-12141648 | None:intergenic | 40.0% |
| AGGCACATGTTCCTTCAAAC+AGG | + | chr2.2:12140601-12140620 | MS.gene84326:CDS | 45.0% | |
| AGTTAATCAGTTAGGCGGAG+CGG | + | chr2.2:12140717-12140736 | MS.gene84326:CDS | 45.0% | |
| ATCGTCTGACCGATCACAAA+AGG | + | chr2.2:12141900-12141919 | MS.gene84326:CDS | 45.0% | |
| CAGCTAAGGATAGAAGCTCA+AGG | + | chr2.2:12141664-12141683 | MS.gene84326:CDS | 45.0% | |
| TATCAGATCCTCTACAGCGA+CGG | + | chr2.2:12141494-12141513 | MS.gene84326:intron | 45.0% | |
| AGGAACATGTGCCTCTCAGA+TGG | - | chr2.2:12140595-12140614 | None:intergenic | 50.0% | |
| AGTGTCTTTGTACCTGCCAC+AGG | - | chr2.2:12141642-12141661 | None:intergenic | 50.0% | |
| CGCGTTTGGATTCTCTGCAA+CGG | - | chr2.2:12141578-12141597 | None:intergenic | 50.0% | |
| GGACACCTGATCTTCATGCA+AGG | + | chr2.2:12140683-12140702 | MS.gene84326:CDS | 50.0% | |
| ATCGAGCCGTCGTTTGGTTG+AGG | - | chr2.2:12141862-12141881 | None:intergenic | 55.0% | |
| GGCGCTGCAAATGCAGATTG+AGG | + | chr2.2:12141393-12141412 | MS.gene84326:CDS | 55.0% | |
| TCAACCAAACGACGGCTCGA+TGG | + | chr2.2:12141861-12141880 | MS.gene84326:CDS | 55.0% | |
| TCTCTGCAACGGCTGCAGAA+CGG | - | chr2.2:12141567-12141586 | None:intergenic | 55.0% | |
| CAGCTCTACCGTCGCTGTAG+AGG | - | chr2.2:12141505-12141524 | None:intergenic | 60.0% | |
| CTGTCCATCGAGCCGTCGTT+TGG | - | chr2.2:12141868-12141887 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 12140583 | 12142302 | 12140583 | ID=MS.gene84326 |
| chr2.2 | mRNA | 12140583 | 12142302 | 12140583 | ID=MS.gene84326.t1;Parent=MS.gene84326 |
| chr2.2 | exon | 12140583 | 12140742 | 12140583 | ID=MS.gene84326.t1.exon1;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12140583 | 12140742 | 12140583 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| chr2.2 | exon | 12140858 | 12140934 | 12140858 | ID=MS.gene84326.t1.exon2;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12140858 | 12140934 | 12140858 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| chr2.2 | exon | 12141013 | 12141073 | 12141013 | ID=MS.gene84326.t1.exon3;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12141013 | 12141073 | 12141013 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| chr2.2 | exon | 12141166 | 12141265 | 12141166 | ID=MS.gene84326.t1.exon4;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12141166 | 12141265 | 12141166 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| chr2.2 | exon | 12141375 | 12141444 | 12141375 | ID=MS.gene84326.t1.exon5;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12141375 | 12141444 | 12141375 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| chr2.2 | exon | 12141649 | 12142302 | 12141649 | ID=MS.gene84326.t1.exon6;Parent=MS.gene84326.t1 |
| chr2.2 | CDS | 12141649 | 12142302 | 12141649 | ID=cds.MS.gene84326.t1;Parent=MS.gene84326.t1 |
| Gene Sequence |
| Protein sequence |
