AlfalfaGEDB | MS.gene072627

M. sativa cultivar XinJiangDaYe / MS.gene072627

KEGG: K03768
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072627.t1	XP_003626095.2	95.3	257	11	1	2	258	6	261	8.20E-136	493

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072627.t1	Q41651	68.6	258	70	4	2	258	1	248	1.4e-91	337.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072627.t1	G7KVH0	95.3	257	11	1	2	258	6	261	5.9e-136	493.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049230	MS.gene072627	0.80629	8.84E-50	-1.69E-46
MS.gene049378	MS.gene072627	0.860579	1.87E-63	-1.69E-46
MS.gene049501	MS.gene072627	0.805305	1.42E-49	-1.69E-46
MS.gene049756	MS.gene072627	0.806552	7.78E-50	-1.69E-46
MS.gene04984	MS.gene072627	0.852313	5.01E-61	-1.69E-46
MS.gene050226	MS.gene072627	0.845201	4.71E-59	-1.69E-46
MS.gene050227	MS.gene072627	0.868641	5.62E-66	-1.69E-46
MS.gene050228	MS.gene072627	0.854606	1.10E-61	-1.69E-46
MS.gene050303	MS.gene072627	0.816843	4.49E-52	-1.69E-46
MS.gene050330	MS.gene072627	-0.813047	3.12E-51	-1.69E-46
MS.gene050438	MS.gene072627	0.819306	1.24E-52	-1.69E-46
MS.gene050442	MS.gene072627	0.85052	1.61E-60	-1.69E-46
MS.gene050623	MS.gene072627	-0.844227	8.61E-59	-1.69E-46
MS.gene050719	MS.gene072627	0.981845	1.37E-153	-1.69E-46
MS.gene050721	MS.gene072627	0.981865	1.22E-153	-1.69E-46
MS.gene050724	MS.gene072627	0.969176	9.70E-130	-1.69E-46
MS.gene050780	MS.gene072627	0.839213	1.81E-57	-1.69E-46
MS.gene050815	MS.gene072627	0.806402	8.37E-50	-1.69E-46
MS.gene050824	MS.gene072627	0.88144	2.40E-70	-1.69E-46
MS.gene050844	MS.gene072627	0.819718	1.00E-52	-1.69E-46
MS.gene050953	MS.gene072627	0.804746	1.86E-49	-1.69E-46
MS.gene051247	MS.gene072627	0.810795	9.65E-51	-1.69E-46
MS.gene051349	MS.gene072627	0.832468	9.29E-56	-1.69E-46
MS.gene051452	MS.gene072627	0.802858	4.59E-49	-1.69E-46
MS.gene051757	MS.gene072627	0.840036	1.11E-57	-1.69E-46
MS.gene051790	MS.gene072627	0.812661	3.79E-51	-1.69E-46
MS.gene051983	MS.gene072627	0.805148	1.54E-49	-1.69E-46
MS.gene052012	MS.gene072627	0.842395	2.65E-58	-1.69E-46
MS.gene052020	MS.gene072627	0.804583	2.02E-49	-1.69E-46
MS.gene052176	MS.gene072627	0.854179	1.46E-61	-1.69E-46
MS.gene052286	MS.gene072627	0.816299	5.94E-52	-1.69E-46
MS.gene052323	MS.gene072627	0.818505	1.89E-52	-1.69E-46
MS.gene052376	MS.gene072627	0.808304	3.31E-50	-1.69E-46
MS.gene052856	MS.gene072627	0.810006	1.43E-50	-1.69E-46
MS.gene052896	MS.gene072627	0.82719	1.79E-54	-1.69E-46
MS.gene053006	MS.gene072627	0.800453	1.43E-48	-1.69E-46
MS.gene053008	MS.gene072627	0.819195	1.32E-52	-1.69E-46
MS.gene053216	MS.gene072627	0.813886	2.04E-51	-1.69E-46
MS.gene05415	MS.gene072627	0.801257	9.81E-49	-1.69E-46
MS.gene054468	MS.gene072627	0.819006	1.46E-52	-1.69E-46
MS.gene05468	MS.gene072627	0.802756	4.82E-49	-1.69E-46
MS.gene054930	MS.gene072627	0.819383	1.20E-52	-1.69E-46
MS.gene055603	MS.gene072627	0.807129	5.88E-50	-1.69E-46
MS.gene055623	MS.gene072627	0.802669	5.03E-49	-1.69E-46
MS.gene055778	MS.gene072627	0.821059	4.94E-53	-1.69E-46
MS.gene055818	MS.gene072627	0.810841	9.43E-51	-1.69E-46
MS.gene056506	MS.gene072627	0.836585	8.58E-57	-1.69E-46
MS.gene056760	MS.gene072627	0.809851	1.54E-50	-1.69E-46
MS.gene056875	MS.gene072627	0.803132	4.03E-49	-1.69E-46
MS.gene056979	MS.gene072627	0.803536	3.33E-49	-1.69E-46
MS.gene057026	MS.gene072627	0.828635	8.06E-55	-1.69E-46
MS.gene057140	MS.gene072627	0.837983	3.77E-57	-1.69E-46
MS.gene05761	MS.gene072627	0.816614	5.05E-52	-1.69E-46
MS.gene05795	MS.gene072627	0.80858	2.89E-50	-1.69E-46
MS.gene057967	MS.gene072627	0.816693	4.85E-52	-1.69E-46
MS.gene057980	MS.gene072627	0.815968	7.04E-52	-1.69E-46
MS.gene058084	MS.gene072627	0.841465	4.68E-58	-1.69E-46
MS.gene058139	MS.gene072627	0.80061	1.33E-48	-1.69E-46
MS.gene058146	MS.gene072627	0.82034	7.22E-53	-1.69E-46
MS.gene058182	MS.gene072627	0.82333	1.47E-53	-1.69E-46
MS.gene058238	MS.gene072627	0.804563	2.03E-49	-1.69E-46
MS.gene058399	MS.gene072627	0.813871	2.06E-51	-1.69E-46
MS.gene058636	MS.gene072627	0.810528	1.10E-50	-1.69E-46
MS.gene058792	MS.gene072627	0.802659	5.05E-49	-1.69E-46
MS.gene058906	MS.gene072627	0.852612	4.12E-61	-1.69E-46
MS.gene058979	MS.gene072627	0.800804	1.21E-48	-1.69E-46
MS.gene059249	MS.gene072627	0.82147	3.97E-53	-1.69E-46
MS.gene059789	MS.gene072627	0.800086	1.70E-48	-1.69E-46
MS.gene060297	MS.gene072627	0.813851	2.08E-51	-1.69E-46
MS.gene060322	MS.gene072627	0.841905	3.58E-58	-1.69E-46
MS.gene060572	MS.gene072627	0.841308	5.14E-58	-1.69E-46
MS.gene060586	MS.gene072627	0.820912	5.34E-53	-1.69E-46
MS.gene060619	MS.gene072627	0.8075	4.90E-50	-1.69E-46
MS.gene060683	MS.gene072627	0.816209	6.22E-52	-1.69E-46
MS.gene060685	MS.gene072627	0.808119	3.62E-50	-1.69E-46
MS.gene060803	MS.gene072627	0.823195	1.58E-53	-1.69E-46
MS.gene060907	MS.gene072627	0.805437	1.34E-49	-1.69E-46
MS.gene060998	MS.gene072627	0.82369	1.21E-53	-1.69E-46
MS.gene061040	MS.gene072627	-0.820584	6.35E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072627.t1	MTR_7g110980	95.331	257	11	1	2	258	6	261	0.0	504
MS.gene072627.t1	MTR_1g085560	70.543	258	68	6	2	258	1	251	5.69e-118	338
MS.gene072627.t1	MTR_1g117010	65.775	187	61	1	73	256	57	243	4.05e-88	261
MS.gene072627.t1	MTR_1g117010	65.775	187	61	1	73	256	57	243	4.05e-88	261
MS.gene072627.t1	MTR_3g463900	61.413	184	59	3	84	256	21	203	5.34e-75	227
MS.gene072627.t1	MTR_3g070500	63.158	171	55	2	91	254	62	231	1.44e-71	219
MS.gene072627.t1	MTR_4g075290	59.064	171	62	2	91	254	2	171	2.15e-68	209
MS.gene072627.t1	MTR_3g117750	58.480	171	63	2	94	257	13	182	3.05e-66	204
MS.gene072627.t1	MTR_7g116340	60.119	168	59	2	94	254	5	171	3.27e-66	203
MS.gene072627.t1	MTR_8g040180	57.576	165	64	2	96	254	21	185	4.42e-62	193
MS.gene072627.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	7.18e-61	196
MS.gene072627.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	1.03e-60	195
MS.gene072627.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	1.07e-60	194
MS.gene072627.t1	MTR_4g073650	49.468	188	87	2	75	255	29	215	6.13e-60	189
MS.gene072627.t1	MTR_8g079690	54.438	169	69	1	94	254	5	173	1.24e-59	192
MS.gene072627.t1	MTR_7g095750	58.333	168	61	2	95	254	9	175	1.69e-59	199
MS.gene072627.t1	MTR_3g070500	67.717	127	34	1	91	210	62	188	2.08e-56	179
MS.gene072627.t1	MTR_2g085075	54.054	148	63	4	105	251	469	612	1.57e-43	155
MS.gene072627.t1	MTR_3g070500	65.686	102	28	1	91	185	62	163	1.23e-40	138
MS.gene072627.t1	MTR_3g070500	65.347	101	28	1	91	184	62	162	2.05e-40	137
MS.gene072627.t1	MTR_7g105220	50.000	146	68	4	105	249	17	158	2.39e-39	134
MS.gene072627.t1	MTR_3g107660	46.784	171	82	2	96	258	13	182	9.03e-39	144
MS.gene072627.t1	MTR_1g011980	43.716	183	87	4	87	258	1	178	3.51e-38	142
MS.gene072627.t1	MTR_3g085705	61.616	99	33	3	139	237	27	120	2.58e-37	128
MS.gene072627.t1	MTR_8g036015	51.034	145	66	4	105	248	8	148	4.00e-35	124
MS.gene072627.t1	MTR_5g015500	46.528	144	72	4	107	249	314	453	2.60e-30	119
MS.gene072627.t1	MTR_5g015500	46.528	144	72	4	107	249	354	493	4.40e-30	118
MS.gene072627.t1	MTR_2g023120	43.333	150	74	7	107	251	22	165	5.56e-22	95.1
MS.gene072627.t1	MTR_6g084140	40.602	133	66	5	105	228	25	153	1.45e-18	85.1
MS.gene072627.t1	MTR_6g084140	40.602	133	66	5	105	228	8	136	1.59e-18	85.1
MS.gene072627.t1	MTR_8g442420	39.850	133	67	5	105	228	8	136	2.25e-17	81.6
MS.gene072627.t1	MTR_1g094065	34.437	151	82	6	105	251	87	224	2.60e-16	76.3
MS.gene072627.t1	MTR_2g461260	31.333	150	84	6	106	236	91	240	5.24e-15	73.6
MS.gene072627.t1	MTR_1g035360	29.932	147	95	5	105	251	86	224	2.55e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072627.t1	AT3G62030	60.465	258	100	1	2	257	1	258	8.17e-109	315
MS.gene072627.t1	AT3G62030	60.232	259	100	1	2	257	1	259	1.43e-108	314
MS.gene072627.t1	AT3G62030	69.585	217	59	3	46	258	100	313	2.81e-105	308
MS.gene072627.t1	AT5G13120	61.780	191	70	1	69	256	62	252	4.59e-87	259
MS.gene072627.t1	AT5G13120	61.780	191	70	1	69	256	66	256	4.90e-87	259
MS.gene072627.t1	AT5G58710	61.497	187	60	3	77	256	23	204	3.07e-76	230
MS.gene072627.t1	AT2G29960	60.963	187	65	2	77	256	16	201	1.61e-75	228
MS.gene072627.t1	AT2G29960	60.963	187	65	2	77	256	16	201	1.61e-75	228
MS.gene072627.t1	AT2G21130	61.310	168	57	2	94	254	6	172	5.59e-70	213
MS.gene072627.t1	AT4G38740	60.119	168	59	2	94	254	5	171	1.12e-68	209
MS.gene072627.t1	AT2G16600	58.824	170	58	3	94	254	6	172	5.50e-68	208
MS.gene072627.t1	AT3G56070	60.714	168	58	2	94	254	5	171	5.94e-68	208
MS.gene072627.t1	AT3G56070	60.714	168	58	2	94	254	5	171	5.94e-68	208
MS.gene072627.t1	AT3G55920	53.731	201	75	3	73	256	29	228	1.09e-67	209
MS.gene072627.t1	AT2G29960	56.684	187	63	3	77	256	16	191	2.18e-66	204
MS.gene072627.t1	AT4G34870	54.913	173	60	3	94	254	5	171	5.70e-61	190
MS.gene072627.t1	AT2G15790	55.556	171	68	1	93	255	4	174	3.50e-60	194
MS.gene072627.t1	AT3G63400	55.429	175	69	2	87	253	1	174	4.60e-60	195
MS.gene072627.t1	AT4G34960	52.571	175	76	1	90	257	44	218	6.61e-59	187
MS.gene072627.t1	AT2G38730	55.758	165	67	2	96	254	35	199	7.75e-59	186
MS.gene072627.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072627.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072627.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072627.t1	AT2G16600	53.988	163	55	3	94	254	6	150	6.26e-57	179
MS.gene072627.t1	AT4G34960	57.031	128	48	1	90	210	44	171	1.10e-46	154
MS.gene072627.t1	AT3G44600	54.730	148	62	4	105	251	483	626	7.13e-43	154
MS.gene072627.t1	AT2G36130	49.315	146	69	4	105	249	17	158	4.07e-39	134
MS.gene072627.t1	AT1G01940	49.655	145	68	4	105	248	8	148	2.06e-35	124
MS.gene072627.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072627.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072627.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072627.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072627.t1	AT4G32420	44.805	154	77	1	87	232	1	154	2.81e-33	128
MS.gene072627.t1	AT3G22920	42.442	172	79	7	94	254	5	167	8.44e-33	120
MS.gene072627.t1	AT5G67530	44.521	146	76	4	107	251	353	494	2.72e-30	119
MS.gene072627.t1	AT4G33060	44.056	143	73	6	107	246	22	160	5.79e-25	103
MS.gene072627.t1	AT1G53720	37.908	153	82	5	105	248	8	156	1.22e-19	87.0
MS.gene072627.t1	AT1G53720	37.908	153	82	5	105	248	8	156	2.97e-19	87.0
MS.gene072627.t1	AT2G47320	31.081	148	95	4	107	254	87	227	7.56e-15	72.0
MS.gene072627.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072627.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072627.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072627.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072627.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9

Find 0 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAATATATATTATTGA+CGG	+	50568:8548-8567	None:intergenic	10.0%
!!	ATAAAAAAATCATTTCAGAT+AGG	+	50568:8877-8896	None:intergenic	15.0%
!!	GTTATATTTGAATATTAGAT+TGG	-	50568:10023-10042	MS.gene072627:CDS	15.0%
!!!	AAAATGTAAGTTTTTCATTT+TGG	-	50568:8334-8353	MS.gene072627:intron	15.0%
!!!	GTGTTGAAAATAAATTTTTT+AGG	+	50568:9743-9762	None:intergenic	15.0%
!!	AATAAAAAATTGACTACCAT+TGG	+	50568:9826-9845	None:intergenic	20.0%
!!	CATAGAAACAAATATAACAA+AGG	+	50568:9457-9476	None:intergenic	20.0%
!!	GATTAATGAACAAAAACAAT+TGG	+	50568:8105-8124	None:intergenic	20.0%
!!!	AAATGAGTAAATAGTCATTT+TGG	-	50568:8490-8509	MS.gene072627:CDS	20.0%
!!!	AATGTTTGTTTGTTTTTTTC+AGG	-	50568:8131-8150	MS.gene072627:CDS	20.0%
!!!	AGTTTTGAAGTAAAAATATC+AGG	+	50568:9879-9898	None:intergenic	20.0%
!!!	ATGTTTGTTTGTTTTTTTCA+GGG	-	50568:8132-8151	MS.gene072627:CDS	20.0%
!!!	ATTTTTTATTTGCACTGTTA+AGG	-	50568:9836-9855	MS.gene072627:intron	20.0%
!!!	TAACATAGCATTTTAAAGTT+TGG	-	50568:9279-9298	MS.gene072627:intron	20.0%
!!!	TACTTACTACTGTAATTTTA+AGG	-	50568:8812-8831	MS.gene072627:intron	20.0%
!!!	TTAATTACACTGTTTTAAAC+TGG	+	50568:9717-9736	None:intergenic	20.0%
!	AAAAATCAATAATCACTGGT+TGG	-	50568:9944-9963	MS.gene072627:intron	25.0%
!	AATCAAAGAATTCATGATTC+AGG	-	50568:9364-9383	MS.gene072627:intron	25.0%
!	ATCAAAGAATTCATGATTCA+GGG	-	50568:9365-9384	MS.gene072627:intron	25.0%
!	CAAGATCAATTAGATATAGT+AGG	-	50568:8283-8302	MS.gene072627:intron	25.0%
!	CTTAGCATATACAGAAAATA+AGG	+	50568:10057-10076	None:intergenic	25.0%
!	GCTTAAAAATCAATAATCAC+TGG	-	50568:9940-9959	MS.gene072627:intron	25.0%
!	GTATCTTTCATTTGTAACAT+TGG	-	50568:8582-8601	MS.gene072627:intron	25.0%
!	GTCCATAAAATTACTAACAA+AGG	-	50568:8675-8694	MS.gene072627:CDS	25.0%
!	TGAATTCTTTGATTATACGA+TGG	+	50568:9358-9377	None:intergenic	25.0%
!	TGGTTGTTTATTTACATGAT+TGG	-	50568:9964-9983	MS.gene072627:CDS	25.0%
!	TTGTTAATCACAAAAATCGT+TGG	-	50568:8975-8994	MS.gene072627:intron	25.0%
!!	GTCCTTTGTTAGTAATTTTA+TGG	+	50568:8680-8699	None:intergenic	25.0%
!!!	ATGGTTTTATTACTGTTATG+AGG	-	50568:9055-9074	MS.gene072627:intron	25.0%
!!!	GTTTTAAAACGAGATTGTTA+TGG	+	50568:8452-8471	None:intergenic	25.0%
!!!	TGGTTTTTAAAATTTCTCCT+TGG	-	50568:9683-9702	MS.gene072627:intron	25.0%
	AAACCTGAAAATGAGAAAGT+GGG	+	50568:8052-8071	None:intergenic	30.0%
	AAGGATGTTATGTTATGACA+TGG	-	50568:8396-8415	MS.gene072627:intron	30.0%
	AATTGACTACCATTGGTATT+AGG	+	50568:9819-9838	None:intergenic	30.0%
	ACTAACAAAGGACACATTTA+GGG	-	50568:8687-8706	MS.gene072627:CDS	30.0%
	AGGATGTTATGTTATGACAT+GGG	-	50568:8397-8416	MS.gene072627:intron	30.0%
	CACATTCAAAAAAGTAATCC+AGG	+	50568:9259-9278	None:intergenic	30.0%
	CCATGTATTTGTTTCAATGA+AGG	-	50568:9503-9522	MS.gene072627:intron	30.0%
	CCTTCATTGAAACAAATACA+TGG	+	50568:9506-9525	None:intergenic	30.0%
	GGACGTTTATTATCTTTACA+TGG	-	50568:9036-9055	MS.gene072627:intron	30.0%
	TACTAACAAAGGACACATTT+AGG	-	50568:8686-8705	MS.gene072627:CDS	30.0%
	TTAAACTGGAATTAAAGCCA+AGG	+	50568:9703-9722	None:intergenic	30.0%
	TTCTACGTCAAAGAAACATT+TGG	+	50568:9108-9127	None:intergenic	30.0%
	TTCTTTGATTATACGATGGA+AGG	+	50568:9354-9373	None:intergenic	30.0%
	TTTGGTCCTTAAATGTTTGA+GGG	-	50568:8508-8527	MS.gene072627:intron	30.0%
!	ATCAAAGGTGCAGAAAAATA+TGG	+	50568:9230-9249	None:intergenic	30.0%
!	CGGAAATTTTCAACTGTTTT+AGG	+	50568:9185-9204	None:intergenic	30.0%
!	TTTTGGTCCTTAAATGTTTG+AGG	-	50568:8507-8526	MS.gene072627:intron	30.0%
!!	CTAGATTTTTAGATAGTGCT+TGG	-	50568:9663-9682	MS.gene072627:intron	30.0%
!!	TAAAATCACATGTTGCTTTG+AGG	-	50568:8235-8254	MS.gene072627:intron	30.0%
!!!	ATTTTCAGGTTTGCACAAAT+GGG	-	50568:8060-8079	MS.gene072627:CDS	30.0%
	AAAGAATTCATGATTCAGGG+AGG	-	50568:9368-9387	MS.gene072627:intron	35.0%
	ACTGTAACCAATTTGTGACA+CGG	+	50568:8202-8221	None:intergenic	35.0%
	ACTTTAATGCCTCACACATT+TGG	-	50568:8741-8760	MS.gene072627:intron	35.0%
	ATGTGTTGTCTATGGTTCAA+AGG	-	50568:8169-8188	MS.gene072627:intron	35.0%
	CAAACCTGAAAATGAGAAAG+TGG	+	50568:8053-8072	None:intergenic	35.0%
	CACTCAAAATGTGTTTCCAT+TGG	-	50568:9542-9561	MS.gene072627:intron	35.0%
	CTGTGTTGTGATTAAGATGT+TGG	-	50568:9015-9034	MS.gene072627:intron	35.0%
	CTTTAATGCCTCACACATTT+GGG	-	50568:8742-8761	MS.gene072627:intron	35.0%
	GTGTTTGGACATGTTATTGA+TGG	-	50568:10158-10177	MS.gene072627:intron	35.0%
	GTTAGTACAATAATTGTCCC+TGG	-	50568:8362-8381	MS.gene072627:intron	35.0%
	GTTTCTTTGACGTAGAAACT+GGG	-	50568:9111-9130	MS.gene072627:CDS	35.0%
	TAATCCAGGTACAAGATCAA+AGG	+	50568:9245-9264	None:intergenic	35.0%
	TGAAACAAATACATGGCAAG+TGG	+	50568:9499-9518	None:intergenic	35.0%
	TGGACATGTTATTGATGGAA+TGG	-	50568:10163-10182	MS.gene072627:intron	35.0%
	TGTTTCTTTGACGTAGAAAC+TGG	-	50568:9110-9129	MS.gene072627:CDS	35.0%
	TTGGTCCTTAAATGTTTGAG+GGG	-	50568:8509-8528	MS.gene072627:intron	35.0%
	TTTCTTTGACGTAGAAACTG+GGG	-	50568:9112-9131	MS.gene072627:CDS	35.0%
!	GAAACATTTGGTAGTCACTT+TGG	+	50568:9096-9115	None:intergenic	35.0%
!	TGAAAATGAGAAAGTGGGTT+GGG	+	50568:8047-8066	None:intergenic	35.0%
!!	ATTTTGATCCCAAATGTGTG+AGG	+	50568:8753-8772	None:intergenic	35.0%
!!!	CATTTTCAGGTTTGCACAAA+TGG	-	50568:8059-8078	MS.gene072627:CDS	35.0%
!!!	TTTTCAGGTTTGCACAAATG+GGG	-	50568:8061-8080	MS.gene072627:CDS	35.0%
	AACATGCAACAGAGACATAC+AGG	+	50568:9626-9645	None:intergenic	40.0%
	ACTACCATTGGTATTAGGAC+CGG	+	50568:9814-9833	None:intergenic	40.0%
	ATCCTTCAACAACATCTCCA+GGG	+	50568:8382-8401	None:intergenic	40.0%
	CATGATTGGAAAGCTCACTA+TGG	-	50568:9978-9997	MS.gene072627:CDS	40.0%
	CCTTGCAGAATCGTTAATTG+CGG	-	50568:10242-10261	MS.gene072627:CDS	40.0%
	CTGAAAATGAGAAAGTGGGT+TGG	+	50568:8048-8067	None:intergenic	40.0%
	GAACCATAGACAACACATCT+TGG	+	50568:8167-8186	None:intergenic	40.0%
	GACAACCCCTCAAACATTTA+AGG	+	50568:8517-8536	None:intergenic	40.0%
	GAGAAAGGATACGGTTACAA+AGG	-	50568:9323-9342	MS.gene072627:intron	40.0%
	TAATCTTGTGCAGGAGAGAA+AGG	-	50568:9308-9327	MS.gene072627:intron	40.0%
	TAGCCAAGATGTGTTGTCTA+TGG	-	50568:8161-8180	MS.gene072627:intron	40.0%
	TCACATACCGTGTCACAAAT+TGG	-	50568:8192-8211	MS.gene072627:intron	40.0%
	TGGCTTCAATAATCTTGTGC+AGG	-	50568:9299-9318	MS.gene072627:intron	40.0%
	TTCTTTGACGTAGAAACTGG+GGG	-	50568:9113-9132	MS.gene072627:CDS	40.0%
	TTGATGGAATGGATGTTGTG+AGG	-	50568:10174-10193	MS.gene072627:intron	40.0%
!	ACATGTCGATTGTCTAACCA+CGG	+	50568:10137-10156	None:intergenic	40.0%
!	ACGATTCTGCAAGGCTTTTT+AGG	+	50568:10236-10255	None:intergenic	40.0%
!	AGATTGAAGCAGTTGAGTTG+AGG	+	50568:8024-8043	None:intergenic	40.0%
!	ATCTTTGGGCAGAATCGTTT+TGG	-	50568:9139-9158	MS.gene072627:CDS	40.0%
!	CAACCCACTTTCTCATTTTC+AGG	-	50568:8046-8065	MS.gene072627:CDS	40.0%
!	CGATTCTGCAAGGCTTTTTA+GGG	+	50568:10235-10254	None:intergenic	40.0%
!	GTTTGCACAAATGGGGTTTT+GGG	-	50568:8068-8087	MS.gene072627:CDS	40.0%
!	TCTTTGGGCAGAATCGTTTT+GGG	-	50568:9140-9159	MS.gene072627:CDS	40.0%
!	TTTTCTGCCACGCAACAATT+TGG	-	50568:8258-8277	MS.gene072627:intron	40.0%
!!	AGAATCGTTTTGGGCTTGTT+TGG	-	50568:9149-9168	MS.gene072627:CDS	40.0%
	AATGCCGGTCCTAATACCAA+TGG	-	50568:9807-9826	MS.gene072627:intron	45.0%
	AATTTCCGTGCTTTGTGCAC+AGG	-	50568:9197-9216	MS.gene072627:intron	45.0%
	AGAAACTGGGGGTCAATCTT+TGG	-	50568:9124-9143	MS.gene072627:CDS	45.0%
	ATCGGTGGAGCTAGTATCTA+TGG	-	50568:9574-9593	MS.gene072627:intron	45.0%
	CATCCTTCAACAACATCTCC+AGG	+	50568:8383-8402	None:intergenic	45.0%
	CCGCAATTAACGATTCTGCA+AGG	+	50568:10245-10264	None:intergenic	45.0%
	CTTCTTGCAGTGAAGCATGT+TGG	-	50568:9762-9781	MS.gene072627:intron	45.0%
	GAAACTGGGGGTCAATCTTT+GGG	-	50568:9125-9144	MS.gene072627:CDS	45.0%
	GACAATCGACATGTCGTGTT+TGG	-	50568:10143-10162	MS.gene072627:intron	45.0%
	TCTTGCTCCAAATTGTTGCG+TGG	+	50568:8268-8287	None:intergenic	45.0%
	TGCACCTTTGATCTTGTACC+TGG	-	50568:9238-9257	MS.gene072627:intron	45.0%
	TGTGCAGGAGAGAAAGGATA+CGG	-	50568:9314-9333	MS.gene072627:intron	45.0%
	TTGAGTCTCAGGAAACAAGC+AGG	-	50568:10201-10220	MS.gene072627:intron	45.0%
	TTGGAAAGCTCACTATGGCA+TGG	-	50568:9983-10002	MS.gene072627:CDS	45.0%
	TTTGCCATGCTCAAAACTCC+AGG	+	50568:9789-9808	None:intergenic	45.0%
!	AATGTGTTTCCATTGGCTGC+AGG	-	50568:9549-9568	MS.gene072627:intron	45.0%
!	ATGTGTTTCCATTGGCTGCA+GGG	-	50568:9550-9569	MS.gene072627:intron	45.0%
!	GGTTTGCACAAATGGGGTTT+TGG	-	50568:8067-8086	MS.gene072627:CDS	45.0%
!!	GTTTTGAGCATGGCAAATGC+CGG	-	50568:9792-9811	MS.gene072627:intron	45.0%
	GTCCCTGGAGATGTTGTTGA+AGG	-	50568:8377-8396	MS.gene072627:intron	50.0%
	TGTGAGGACACTTGAGTCTC+AGG	-	50568:10190-10209	MS.gene072627:intron	50.0%
!	TTCCATTGGCTGCAGGGAAT+CGG	-	50568:9556-9575	MS.gene072627:intron	50.0%
!!	CGTTTTGGGCTTGTTTGGAG+AGG	-	50568:9154-9173	MS.gene072627:CDS	50.0%
!!!	TGGTCCTGGAGTTTTGAGCA+TGG	-	50568:9782-9801	MS.gene072627:intron	50.0%
	CAGGGAGGAGACTTCACTGA+GGG	-	50568:9383-9402	MS.gene072627:intron	55.0%
	GCAGTGAAGCATGTTGGTCC+TGG	-	50568:9768-9787	MS.gene072627:intron	55.0%
	GCATATGATCGCAGACTCCG+TGG	-	50568:10117-10136	MS.gene072627:CDS	55.0%
	GCTTGCCTGTGCACAAAGCA+CGG	+	50568:9205-9224	None:intergenic	55.0%
	TCAGGGAGGAGACTTCACTG+AGG	-	50568:9382-9401	MS.gene072627:intron	55.0%
	TGCGGAGAACTGCCCATAGA+TGG	-	50568:10260-10279	MS.gene072627:CDS	55.0%
!	CATTGGCTGCAGGGAATCGG+TGG	-	50568:9559-9578	MS.gene072627:intron	60.0%
!!	CACCGATTCCCTGCAGCCAA+TGG	+	50568:9561-9580	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
50568	gene	8005	10286	8005	ID=MS.gene072627
50568	mRNA	8005	10286	8005	ID=MS.gene072627.t1;Parent=MS.gene072627
50568	exon	10224	10286	10224	ID=MS.gene072627.t1.exon1;Parent=MS.gene072627.t1
50568	CDS	10224	10286	10224	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	9953	10138	9953	ID=MS.gene072627.t1.exon2;Parent=MS.gene072627.t1
50568	CDS	9953	10138	9953	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	9073	9214	9073	ID=MS.gene072627.t1.exon3;Parent=MS.gene072627.t1
50568	CDS	9073	9214	9073	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	8882	8970	8882	ID=MS.gene072627.t1.exon4;Parent=MS.gene072627.t1
50568	CDS	8882	8970	8882	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	8666	8720	8666	ID=MS.gene072627.t1.exon5;Parent=MS.gene072627.t1
50568	CDS	8666	8720	8666	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	8434	8519	8434	ID=MS.gene072627.t1.exon6;Parent=MS.gene072627.t1
50568	CDS	8434	8519	8434	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1
50568	exon	8005	8160	8005	ID=MS.gene072627.t1.exon7;Parent=MS.gene072627.t1
50568	CDS	8005	8160	8005	ID=cds.MS.gene072627.t1;Parent=MS.gene072627.t1

Gene Sequence

>MS.gene072627

GTGATGGCGTTTTCATCCTCAACTCAACTGCTTCAATCTCCCAACCCACTTTCTCATTTTCAGGTTTGCACAAATGGGGTTTTGGGTTTTTAATGTTCCAATTGTTTTTGTTCATTAATCATTCTAAATGTTTGTTTGTTTTTTTCAGGGTAATTTTAGCCAAGATGTGTTGTCTATGGTTCAAAGGTCACATACCGTGTCACAAATTGGTTACAGTAAATCATTGTCATTAAAATCACATGTTGCTTTGAGGTTTTCTGCCACGCAACAATTTGGAGCAAGATCAATTAGATATAGTAGGAGAATCACATGTGCAGCTGCTGCTTCAGAAAATGTAAGTTTTTCATTTTGGAATTTGTTAGTACAATAATTGTCCCTGGAGATGTTGTTGAAGGATGTTATGTTATGACATGGGCGATAATAATACTAATGTTTTATCTATTTCCATAACAATCTCGTTTTAAAACTAGTATCAAAGTGATAATAAATGAGTAAATAGTCATTTTGGTCCTTAAATGTTTGAGGGGTTGTCACGATAGTCCGTCAATAATATATATTGAAATTACATAACATATATGTATCTTTCATTTGTAACATTGGTTCTTAAATGTGTCTTTTGTTAGTTAGTTAGTTAGTTTGATCTTTGAATGTTTTTCAGTTAGTTAATTTAGTCCATAAAATTACTAACAAAGGACACATTTAGGGATGTTTTCGTAATTTGATAAATTCGATGACTACTTTAATGCCTCACACATTTGGGATCAAAATGACTGTTTACTCGAGAATACTTATAGTCTTATACAATGTTACTTACTACTGTAATTTTAAGGAAAACAGAAAACGAGTAGAAAATGTTTTCTTAAACTAAACCTATCTGAAATGATTTTTTTATATTTAGACTGCTTGTTTGTTGTTGTTTGATTTCATTAAATGTTTGTATTGTTTACGTGTTTATAATCTAATTGACTATTTGTTAATCACAAAAATCGTTGGCATTGTTCAATAGTTGACTGTGTTGTGATTAAGATGTTGGACGTTTATTATCTTTACATGGTTTTATTACTGTTATGAGGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGACGTAGAAACTGGGGGTCAATCTTTGGGCAGAATCGTTTTGGGCTTGTTTGGAGAGGTTGCTCCTAAAACAGTTGAAAATTTCCGTGCTTTGTGCACAGGCAAGCAACCATATTTTTCTGCACCTTTGATCTTGTACCTGGATTACTTTTTTGAATGTGTAACATAGCATTTTAAAGTTTGGCTTCAATAATCTTGTGCAGGAGAGAAAGGATACGGTTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAGGGAGGAGACTTCACTGAGGGAAATGTGAGATTTGTTGCATTTGTTTGTTTGCTTGTATACGTGAATAGCCTTTGTTATATTTGTTTCTATGTTAATGTGAACATTTACTTCCACTTGCCATGTATTTGTTTCAATGAAGGTAATTATGTTTCTTCTCACTCAAAATGTGTTTCCATTGGCTGCAGGGAATCGGTGGAGCTAGTATCTATGGTTCTAGTTTCGAAGATGAGAGTTTTGCCTGTATGTCTCTGTTGCATGTTGTACAGTAGTAGTATATCTAGATTTTTAGATAGTGCTTGGTTTTTAAAATTTCTCCTTGGCTTTAATTCCAGTTTAAAACAGTGTAATTAATCTCCTAAAAAATTTATTTTCAACACTTCTTGCAGTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTTAAGGTGAGAGACATGTACTGTCCTGATATTTTTACTTCAAAACTTTATACGCTTTAATGACTGTAAAATTCGAATTTCTGATTAAGCTTAAAAATCAATAATCACTGGTTGGTTGTTTATTTACATGATTGGAAAGCTCACTATGGCATGGTATATATAGCTCTATCTGTTATATTTGAATATTAGATTGGAGAACATTCCTTATTTTCTGTATATGCTAAGTAACATGTTTAGTTTACTTACTAATATATTCAAATATTCTGCATATGATCGCAGACTCCGTGGTTAGACAATCGACATGTCGTGTTTGGACATGTTATTGATGGAATGGATGTTGTGAGGACACTTGAGTCTCAGGAAACAAGCAGGTTAGATATCCCTAAAAAGCCTTGCAGAATCGTTAATTGCGGAGAACTGCCCATAGATGGTTGA

Protein sequence

>MS.gene072627.t1

VMAFSSSTQLLQSPNPLSHFQGNFSQDVLSMVQRSHTVSQIGYSKSLSLKSHVALRFSATQQFGARSIRYSRRITCAAAASENVQELQAKVTTKCFFDVETGGQSLGRIVLGLFGEVAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGNGIGGASIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVNCGELPIDG