Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76403.t1 | XP_013446409.1 | 99.5 | 185 | 1 | 0 | 1 | 185 | 1 | 185 | 1.30E-98 | 369 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76403.t1 | Q9ZPX1 | 94.6 | 185 | 10 | 0 | 1 | 185 | 1 | 185 | 4.6e-97 | 355.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76403.t1 | G7LER6 | 99.5 | 185 | 1 | 0 | 1 | 185 | 27 | 211 | 9.2e-99 | 369.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene76403 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene049341 | MS.gene76403 | 0.81449 | 1.50E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene76403 | 0.804116 | 2.52E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene76403 | 0.808441 | 3.09E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene76403 | 0.813726 | 2.21E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene76403 | 0.866524 | 2.68E-65 | -1.69E-46 |
| MS.gene050721 | MS.gene76403 | 0.867714 | 1.12E-65 | -1.69E-46 |
| MS.gene050724 | MS.gene76403 | 0.872479 | 3.08E-67 | -1.69E-46 |
| MS.gene050780 | MS.gene76403 | 0.815364 | 9.60E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene76403 | 0.817473 | 3.24E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene76403 | 0.817045 | 4.04E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene76403 | 0.834885 | 2.31E-56 | -1.69E-46 |
| MS.gene051757 | MS.gene76403 | 0.827684 | 1.37E-54 | -1.69E-46 |
| MS.gene052012 | MS.gene76403 | 0.81038 | 1.19E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene76403 | 0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene76403 | 0.80245 | 5.58E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene76403 | 0.805487 | 1.30E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene76403 | 0.80413 | 2.50E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene76403 | 0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene76403 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene76403 | 0.824787 | 6.68E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene76403 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene76403 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene76403 | 0.802284 | 6.03E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene76403 | 0.837978 | 3.78E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene76403 | 0.808847 | 2.53E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene76403 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene055363 | MS.gene76403 | 0.815248 | 1.02E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene76403 | 0.817937 | 2.55E-52 | -1.69E-46 |
| MS.gene055818 | MS.gene76403 | 0.814474 | 1.51E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene76403 | 0.830819 | 2.37E-55 | -1.69E-46 |
| MS.gene057057 | MS.gene76403 | 0.804856 | 1.77E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene76403 | 0.834073 | 3.70E-56 | -1.69E-46 |
| MS.gene057360 | MS.gene76403 | 0.817798 | 2.74E-52 | -1.69E-46 |
| MS.gene05795 | MS.gene76403 | 0.810157 | 1.33E-50 | -1.69E-46 |
| MS.gene057980 | MS.gene76403 | 0.8071 | 5.96E-50 | -1.69E-46 |
| MS.gene058084 | MS.gene76403 | 0.807211 | 5.65E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene76403 | 0.809243 | 2.08E-50 | -1.69E-46 |
| MS.gene058238 | MS.gene76403 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene058636 | MS.gene76403 | 0.801946 | 7.08E-49 | -1.69E-46 |
| MS.gene058792 | MS.gene76403 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene76403 | 0.865691 | 4.91E-65 | -1.69E-46 |
| MS.gene058982 | MS.gene76403 | 0.808627 | 2.82E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene76403 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene76403 | 0.802097 | 6.59E-49 | -1.69E-46 |
| MS.gene059789 | MS.gene76403 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene060165 | MS.gene76403 | 0.816754 | 4.70E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene76403 | 0.813064 | 3.09E-51 | -1.69E-46 |
| MS.gene060586 | MS.gene76403 | 0.819928 | 8.98E-53 | -1.69E-46 |
| MS.gene060619 | MS.gene76403 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene060907 | MS.gene76403 | 0.811715 | 6.09E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76403 | MS.gene43537 | PPI |
| MS.gene78539 | MS.gene76403 | PPI |
| MS.gene76403 | MS.gene015262 | PPI |
| MS.gene012429 | MS.gene76403 | PPI |
| MS.gene76403 | MS.gene09604 | PPI |
| MS.gene76403 | MS.gene00883 | PPI |
| MS.gene018361 | MS.gene76403 | PPI |
| MS.gene035679 | MS.gene76403 | PPI |
| MS.gene76403 | MS.gene20302 | PPI |
| MS.gene002877 | MS.gene76403 | PPI |
| MS.gene76403 | MS.gene047915 | PPI |
| MS.gene76403 | MS.gene57908 | PPI |
| MS.gene26119 | MS.gene76403 | PPI |
| MS.gene76403 | MS.gene01845 | PPI |
| MS.gene064512 | MS.gene76403 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76403.t1 | MTR_8g077540 | 99.459 | 185 | 1 | 0 | 1 | 185 | 1 | 185 | 7.94e-134 | 372 |
| MS.gene76403.t1 | MTR_8g077540 | 99.459 | 185 | 1 | 0 | 1 | 185 | 27 | 211 | 1.70e-133 | 372 |
| MS.gene76403.t1 | MTR_8g077540 | 97.414 | 116 | 3 | 0 | 1 | 116 | 1 | 116 | 6.61e-78 | 229 |
| MS.gene76403.t1 | MTR_7g109960 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.73e-52 | 166 |
| MS.gene76403.t1 | MTR_6g005820 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.79e-52 | 165 |
| MS.gene76403.t1 | MTR_5g016540 | 46.995 | 183 | 93 | 4 | 1 | 181 | 1 | 181 | 3.04e-52 | 165 |
| MS.gene76403.t1 | MTR_1g086480 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 9.05e-52 | 164 |
| MS.gene76403.t1 | MTR_5g034130 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.03e-51 | 164 |
| MS.gene76403.t1 | MTR_5g034125 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.03e-51 | 164 |
| MS.gene76403.t1 | MTR_4g128910 | 48.795 | 166 | 82 | 3 | 15 | 179 | 16 | 179 | 2.14e-49 | 158 |
| MS.gene76403.t1 | MTR_4g077640 | 45.283 | 159 | 84 | 3 | 16 | 173 | 17 | 173 | 3.56e-46 | 150 |
| MS.gene76403.t1 | MTR_5g007810 | 45.283 | 159 | 84 | 3 | 16 | 173 | 17 | 173 | 3.78e-46 | 150 |
| MS.gene76403.t1 | MTR_5g007820 | 41.667 | 168 | 93 | 4 | 16 | 180 | 17 | 182 | 3.15e-41 | 137 |
| MS.gene76403.t1 | MTR_1g076550 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 2.11e-40 | 135 |
| MS.gene76403.t1 | MTR_2g022200 | 42.515 | 167 | 88 | 2 | 16 | 175 | 17 | 182 | 1.08e-39 | 134 |
| MS.gene76403.t1 | MTR_5g015370 | 33.728 | 169 | 108 | 3 | 14 | 180 | 17 | 183 | 2.66e-27 | 102 |
| MS.gene76403.t1 | MTR_4g121860 | 33.714 | 175 | 105 | 1 | 14 | 177 | 18 | 192 | 1.31e-25 | 97.8 |
| MS.gene76403.t1 | MTR_2g034640 | 33.143 | 175 | 106 | 1 | 14 | 177 | 18 | 192 | 4.93e-25 | 96.3 |
| MS.gene76403.t1 | MTR_5g007840 | 31.156 | 199 | 89 | 5 | 16 | 180 | 17 | 201 | 7.25e-25 | 96.3 |
| MS.gene76403.t1 | MTR_5g078090 | 32.927 | 164 | 106 | 3 | 14 | 175 | 17 | 178 | 9.64e-25 | 95.5 |
| MS.gene76403.t1 | MTR_7g112090 | 32.000 | 175 | 108 | 1 | 14 | 177 | 18 | 192 | 1.40e-24 | 95.1 |
| MS.gene76403.t1 | MTR_4g026950 | 32.530 | 166 | 108 | 3 | 17 | 180 | 1 | 164 | 3.84e-24 | 93.2 |
| MS.gene76403.t1 | MTR_4g073560 | 46.269 | 67 | 35 | 1 | 109 | 175 | 118 | 183 | 1.36e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76403.t1 | AT2G18390 | 94.595 | 185 | 10 | 0 | 1 | 185 | 1 | 185 | 1.49e-118 | 333 |
| MS.gene76403.t1 | AT1G10630 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.83e-52 | 166 |
| MS.gene76403.t1 | AT1G10630 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 2.83e-52 | 166 |
| MS.gene76403.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene76403.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene76403.t1 | AT2G47170 | 49.405 | 168 | 82 | 3 | 14 | 180 | 15 | 180 | 3.22e-52 | 165 |
| MS.gene76403.t1 | AT5G14670 | 48.521 | 169 | 84 | 3 | 14 | 181 | 15 | 181 | 3.74e-52 | 165 |
| MS.gene76403.t1 | AT5G14670 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 8.32e-52 | 164 |
| MS.gene76403.t1 | AT5G14670 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 8.32e-52 | 164 |
| MS.gene76403.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene76403.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene76403.t1 | AT3G62290 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.09e-51 | 164 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G23490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT1G70490 | 48.810 | 168 | 83 | 3 | 14 | 180 | 15 | 180 | 1.88e-51 | 163 |
| MS.gene76403.t1 | AT2G15310 | 45.143 | 175 | 94 | 2 | 6 | 180 | 8 | 180 | 6.53e-50 | 160 |
| MS.gene76403.t1 | AT2G24765 | 48.193 | 166 | 83 | 3 | 15 | 179 | 16 | 179 | 3.32e-49 | 157 |
| MS.gene76403.t1 | AT5G17060 | 45.000 | 160 | 85 | 3 | 15 | 173 | 16 | 173 | 7.87e-47 | 152 |
| MS.gene76403.t1 | AT5G17060 | 45.000 | 160 | 85 | 3 | 15 | 173 | 16 | 173 | 7.87e-47 | 152 |
| MS.gene76403.t1 | AT3G03120 | 44.375 | 160 | 86 | 3 | 15 | 173 | 16 | 173 | 9.36e-47 | 152 |
| MS.gene76403.t1 | AT3G22950 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 1.03e-40 | 136 |
| MS.gene76403.t1 | AT3G22950 | 39.157 | 166 | 100 | 1 | 15 | 180 | 16 | 180 | 1.03e-40 | 136 |
| MS.gene76403.t1 | AT2G24765 | 50.877 | 114 | 54 | 2 | 15 | 127 | 16 | 128 | 5.10e-35 | 120 |
| MS.gene76403.t1 | AT5G52210 | 37.952 | 166 | 95 | 2 | 16 | 174 | 17 | 181 | 5.18e-35 | 122 |
| MS.gene76403.t1 | AT5G52210 | 37.952 | 166 | 95 | 2 | 16 | 174 | 17 | 181 | 5.18e-35 | 122 |
| MS.gene76403.t1 | AT3G03120 | 43.966 | 116 | 63 | 2 | 15 | 129 | 16 | 130 | 6.08e-33 | 115 |
| MS.gene76403.t1 | AT1G02430 | 32.370 | 173 | 108 | 4 | 13 | 176 | 14 | 186 | 2.20e-29 | 107 |
| MS.gene76403.t1 | AT1G02440 | 32.370 | 173 | 108 | 4 | 13 | 176 | 14 | 186 | 2.45e-29 | 107 |
| MS.gene76403.t1 | AT3G49860 | 35.503 | 169 | 107 | 2 | 13 | 180 | 8 | 175 | 1.50e-28 | 105 |
| MS.gene76403.t1 | AT3G49870 | 34.320 | 169 | 107 | 3 | 14 | 180 | 17 | 183 | 1.39e-27 | 102 |
| MS.gene76403.t1 | AT5G67560 | 34.444 | 180 | 113 | 4 | 2 | 179 | 6 | 182 | 1.72e-27 | 102 |
| MS.gene76403.t1 | AT3G49870 | 34.337 | 166 | 105 | 3 | 17 | 180 | 1 | 164 | 8.87e-27 | 100 |
| MS.gene76403.t1 | AT1G56330 | 33.143 | 175 | 106 | 1 | 14 | 177 | 18 | 192 | 4.21e-25 | 96.7 |
| MS.gene76403.t1 | AT5G37680 | 35.374 | 147 | 93 | 2 | 14 | 158 | 17 | 163 | 5.85e-25 | 95.9 |
| MS.gene76403.t1 | AT3G62560 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 7.18e-25 | 95.9 |
| MS.gene76403.t1 | AT4G02080 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 1.09e-24 | 95.5 |
| MS.gene76403.t1 | AT1G09180 | 32.571 | 175 | 107 | 1 | 14 | 177 | 18 | 192 | 1.01e-22 | 90.5 |
| MS.gene76403.t1 | AT1G02430 | 31.507 | 146 | 93 | 4 | 14 | 153 | 15 | 159 | 2.36e-21 | 85.9 |
| MS.gene76403.t1 | AT5G37680 | 32.824 | 131 | 85 | 2 | 46 | 175 | 3 | 131 | 7.75e-20 | 81.3 |
| MS.gene76403.t1 | AT1G02620 | 35.780 | 109 | 59 | 1 | 80 | 177 | 13 | 121 | 2.58e-11 | 58.5 |
Find 45 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGTGGGTTGGACAATTC+AGG | 0.241231 | 8.1:-30296645 | MS.gene76403:intron |
| CTTACCTTAGCTATTTCTTC+TGG | 0.265683 | 8.1:+30294092 | None:intergenic |
| GCAAATAAACAAGATATTAA+AGG | 0.268511 | 8.1:-30294125 | MS.gene76403:CDS |
| TTCATATGACAGAGACTATC+TGG | 0.268803 | 8.1:-30294167 | MS.gene76403:intron |
| AACAGACCTCTTCCTTTAGA+AGG | 0.334759 | 8.1:+30294676 | None:intergenic |
| GAAGGAAATGCGAATTCTTA+TGG | 0.370357 | 8.1:-30296745 | MS.gene76403:CDS |
| CTTTGAGCAAACAGATGGTT+TGG | 0.372293 | 8.1:-30294760 | MS.gene76403:CDS |
| AGCAAACAGATGGTTTGGTT+TGG | 0.382912 | 8.1:-30294755 | MS.gene76403:CDS |
| TTTATTTGCTAGAATTAGTA+AGG | 0.393701 | 8.1:+30294139 | None:intergenic |
| GCAGGTACACTCTAAACATA+TGG | 0.396228 | 8.1:-30294827 | MS.gene76403:intron |
| GCAAACAGATGGTTTGGTTT+GGG | 0.400753 | 8.1:-30294754 | MS.gene76403:CDS |
| AAGATTGGATGATTGCAAAA+TGG | 0.416311 | 8.1:-30294709 | MS.gene76403:CDS |
| ACTGGTGAGGGCTTGCTTGA+GGG | 0.425615 | 8.1:-30293165 | MS.gene76403:CDS |
| GGGATTTGATTGGTTGGTCC+AGG | 0.450854 | 8.1:-30293145 | MS.gene76403:CDS |
| AACTGCGCAGGTGTTGAACT+TGG | 0.453484 | 8.1:-30293238 | MS.gene76403:intron |
| GCTTGCTTGAGGGATTTGAT+TGG | 0.453614 | 8.1:-30293155 | MS.gene76403:CDS |
| GCTTGAGGGATTTGATTGGT+TGG | 0.472113 | 8.1:-30293151 | MS.gene76403:CDS |
| TAGCTATTTCTTCTGGTGCA+AGG | 0.473584 | 8.1:+30294099 | None:intergenic |
| CAGTTCGGATCTGAGAAGAT+TGG | 0.474805 | 8.1:-30294724 | MS.gene76403:CDS |
| TGGGTCTTCTCAGCATCATT+CGG | 0.490641 | 8.1:-30296785 | MS.gene76403:CDS |
| GCAGTGGGTTGGACAATTCA+GGG | 0.493312 | 8.1:-30296644 | MS.gene76403:intron |
| AGCTATTTCTTCTGGTGCAA+GGG | 0.494608 | 8.1:+30294100 | None:intergenic |
| GGTTTGGGTAGTTGACAGTT+CGG | 0.497651 | 8.1:-30294739 | MS.gene76403:CDS |
| CACTGGTGAGGGCTTGCTTG+AGG | 0.504277 | 8.1:-30293166 | MS.gene76403:CDS |
| ACTCTAAACATATGGGATGT+TGG | 0.508762 | 8.1:-30294819 | MS.gene76403:CDS |
| TCTCGACACTGGATGATAGT+TGG | 0.513687 | 8.1:-30293201 | MS.gene76403:CDS |
| GGAGCTAGATAACCTTCTAA+AGG | 0.521958 | 8.1:-30294688 | MS.gene76403:CDS |
| GAAAATTAAGAAGAAGGAGA+AGG | 0.526706 | 8.1:-30296763 | MS.gene76403:CDS |
| AGCGTCATCAGTCCTACCCT+TGG | 0.534533 | 8.1:-30296582 | MS.gene76403:CDS |
| AGATAACCTTCTAAAGGAAG+AGG | 0.535139 | 8.1:-30294682 | MS.gene76403:intron |
| AACTACTTTGAGCAAACAGA+TGG | 0.544724 | 8.1:-30294765 | MS.gene76403:CDS |
| CATTCGGAAAATTAAGAAGA+AGG | 0.545987 | 8.1:-30296769 | MS.gene76403:CDS |
| GTTTCTCCAGTAAGATCGAA+TGG | 0.552560 | 8.1:+30294785 | None:intergenic |
| GGTGTTGAACTTGGAAGCGA+TGG | 0.561088 | 8.1:-30293229 | MS.gene76403:CDS |
| GCAATTGTTATGCAGTGGGT+TGG | 0.563288 | 8.1:-30296655 | MS.gene76403:intron |
| AGATTCTAGAGGCTATGTCC+TGG | 0.564870 | 8.1:+30293127 | None:intergenic |
| CTGTAGTGCGTACACTGGTG+AGG | 0.567647 | 8.1:-30293178 | MS.gene76403:CDS |
| CTAAACATATGGGATGTTGG+AGG | 0.581978 | 8.1:-30294816 | MS.gene76403:CDS |
| CAGGTACACTCTAAACATAT+GGG | 0.585114 | 8.1:-30294826 | MS.gene76403:CDS |
| TGCACCAGAAGAAATAGCTA+AGG | 0.599602 | 8.1:-30294096 | MS.gene76403:intron |
| TTGATGTTGAATCCAAGGGT+AGG | 0.603177 | 8.1:+30296570 | None:intergenic |
| TGTAGTGCGTACACTGGTGA+GGG | 0.614788 | 8.1:-30293177 | MS.gene76403:CDS |
| CGATGGATAAATCTCGACAC+TGG | 0.617621 | 8.1:-30293212 | MS.gene76403:CDS |
| GTCGAGCAAGTAGATTCTAG+AGG | 0.639725 | 8.1:+30293116 | None:intergenic |
| GTTGGCTGTAGTGCGTACAC+TGG | 0.644179 | 8.1:-30293183 | MS.gene76403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATCTAACAT+TGG | - | chr8.1:30294382-30294401 | MS.gene76403:intron | 10.0% |
| !!! | TAAATATATTACTTTTGTTT+TGG | - | chr8.1:30294934-30294953 | MS.gene76403:intron | 10.0% |
| !! | CAAATAAATAAATTGAAAGT+TGG | + | chr8.1:30296444-30296463 | None:intergenic | 15.0% |
| !!! | TAATATACTTTTGTTTTATG+AGG | - | chr8.1:30293569-30293588 | MS.gene76403:intron | 15.0% |
| !!! | TTAATTCTTTTTAACGAAAA+TGG | + | chr8.1:30294360-30294379 | None:intergenic | 15.0% |
| !!! | TTCATTTTTATGACAATATA+TGG | - | chr8.1:30296336-30296355 | MS.gene76403:intron | 15.0% |
| !!! | TTTTTTTTCTTTAAATGCTT+TGG | - | chr8.1:30293648-30293667 | MS.gene76403:intron | 15.0% |
| !! | AAAATAACTAAAGATTGCTT+TGG | + | chr8.1:30295564-30295583 | None:intergenic | 20.0% |
| !! | AATCAACAGATCAAATAAAA+GGG | + | chr8.1:30295349-30295368 | None:intergenic | 20.0% |
| !! | ACTTCTCATTGTTAATAATT+TGG | - | chr8.1:30295635-30295654 | MS.gene76403:intron | 20.0% |
| !! | AGAAAAATAAAAATGGACAT+CGG | + | chr8.1:30293435-30293454 | None:intergenic | 20.0% |
| !! | ATGTACATAAAAAAATACGT+AGG | - | chr8.1:30296185-30296204 | MS.gene76403:intron | 20.0% |
| !! | CTTCTCATTGTTAATAATTT+GGG | - | chr8.1:30295636-30295655 | MS.gene76403:intron | 20.0% |
| !! | GCAAATAAACAAGATATTAA+AGG | - | chr8.1:30295774-30295793 | MS.gene76403:intron | 20.0% |
| !! | TAATCAACAGATCAAATAAA+AGG | + | chr8.1:30295350-30295369 | None:intergenic | 20.0% |
| !! | TCAAAATAAAACAATCTCAT+CGG | + | chr8.1:30295693-30295712 | None:intergenic | 20.0% |
| !!! | GATATTCAGTAATTTTCTTA+AGG | - | chr8.1:30295308-30295327 | MS.gene76403:intron | 20.0% |
| !!! | TATGTTAAGTCATCATTTTT+AGG | - | chr8.1:30293466-30293485 | MS.gene76403:intron | 20.0% |
| !!! | TCTGTTTTTCTGATTTTTTT+GGG | - | chr8.1:30294257-30294276 | MS.gene76403:intron | 20.0% |
| !!! | TTCTGTTTTTCTGATTTTTT+TGG | - | chr8.1:30294256-30294275 | MS.gene76403:intron | 20.0% |
| !!! | TTTATTTGCTAGAATTAGTA+AGG | + | chr8.1:30295763-30295782 | None:intergenic | 20.0% |
| ! | AAAATGGTCAAGATTACAAT+TGG | + | chr8.1:30294344-30294363 | None:intergenic | 25.0% |
| ! | AAACATAATATGCTGAGAAT+TGG | - | chr8.1:30295885-30295904 | MS.gene76403:intron | 25.0% |
| ! | AAATGGTCAAGATTACAATT+GGG | + | chr8.1:30294343-30294362 | None:intergenic | 25.0% |
| ! | CTAAGCGTAAAAATTAACTA+AGG | - | chr8.1:30296529-30296548 | MS.gene76403:intron | 25.0% |
| ! | CTATTAAACAAACCTATTTG+TGG | - | chr8.1:30296046-30296065 | MS.gene76403:intron | 25.0% |
| ! | GCAAACGAGAAAAATAAAAA+TGG | + | chr8.1:30293442-30293461 | None:intergenic | 25.0% |
| ! | TAAATGCACAAGTTATCATA+AGG | + | chr8.1:30295509-30295528 | None:intergenic | 25.0% |
| ! | TAAGAAACTAGGTAAAACAA+AGG | + | chr8.1:30293739-30293758 | None:intergenic | 25.0% |
| ! | TACATCTAAATACTTAACTG+AGG | - | chr8.1:30295286-30295305 | MS.gene76403:intron | 25.0% |
| ! | TACTTGTCAACATAATAGAT+TGG | - | chr8.1:30295262-30295281 | MS.gene76403:intron | 25.0% |
| ! | TCAAATATTTGTAGGGATAA+GGG | + | chr8.1:30294529-30294548 | None:intergenic | 25.0% |
| ! | TGATGTAATAACACATACAT+AGG | - | chr8.1:30296273-30296292 | MS.gene76403:intron | 25.0% |
| ! | TGTGATATTGCTTCTTAATT+TGG | - | chr8.1:30293599-30293618 | MS.gene76403:intron | 25.0% |
| ! | TTATCTTAATAACTACTCGT+CGG | - | chr8.1:30296003-30296022 | MS.gene76403:intron | 25.0% |
| !! | AAGGTAAGCTTAATTTTATC+TGG | - | chr8.1:30295822-30295841 | MS.gene76403:intron | 25.0% |
| !! | AGGTAAGCTTAATTTTATCT+GGG | - | chr8.1:30295823-30295842 | MS.gene76403:intron | 25.0% |
| !! | GCTTTTATCTAAATTGACAA+TGG | - | chr8.1:30295050-30295069 | MS.gene76403:intron | 25.0% |
| !! | TAAAATTAGAGTGATTTGTG+AGG | + | chr8.1:30293396-30293415 | None:intergenic | 25.0% |
| !! | TATTGCTTCTTAATTTGGTA+CGG | - | chr8.1:30293604-30293623 | MS.gene76403:intron | 25.0% |
| !! | TGTAGTAAAATCTAGAATGA+TGG | + | chr8.1:30293204-30293223 | None:intergenic | 25.0% |
| !!! | ACAATCGTTTTGAAGATTAA+CGG | - | chr8.1:30293284-30293303 | MS.gene76403:intron | 25.0% |
| !!! | AGTCATCATTTTTAGGAATT+AGG | - | chr8.1:30293473-30293492 | MS.gene76403:intron | 25.0% |
| !!! | GGCTTTATAATAAAGTTTTG+CGG | - | chr8.1:30294686-30294705 | MS.gene76403:CDS | 25.0% |
| !!! | TTGTTTTACCTAGTTTCTTA+CGG | - | chr8.1:30293739-30293758 | MS.gene76403:intron | 25.0% |
| AAAAAACCATTCGATCTTAC+TGG | - | chr8.1:30295108-30295127 | MS.gene76403:intron | 30.0% | |
| AAATTATACCTGAACCACAA+TGG | - | chr8.1:30296570-30296589 | MS.gene76403:CDS | 30.0% | |
| AAGATTGGATGATTGCAAAA+TGG | - | chr8.1:30295190-30295209 | MS.gene76403:intron | 30.0% | |
| AATTATACCTGAACCACAAT+GGG | - | chr8.1:30296571-30296590 | MS.gene76403:CDS | 30.0% | |
| ATCTTCAATAATGTGACCAA+AGG | - | chr8.1:30293936-30293955 | MS.gene76403:intron | 30.0% | |
| ATGATTACTCTGTTCTTCTT+TGG | - | chr8.1:30295667-30295686 | MS.gene76403:intron | 30.0% | |
| ATTTGTAGAAAAGACACATC+GGG | + | chr8.1:30294028-30294047 | None:intergenic | 30.0% | |
| CAATTTAGATAAAAGCCTCA+AGG | + | chr8.1:30295046-30295065 | None:intergenic | 30.0% | |
| CATATAAAATGATGCAGGTT+AGG | - | chr8.1:30296120-30296139 | MS.gene76403:intron | 30.0% | |
| CATTCGGAAAATTAAGAAGA+AGG | - | chr8.1:30293130-30293149 | MS.gene76403:CDS | 30.0% | |
| CATTTGTAGAAAAGACACAT+CGG | + | chr8.1:30294029-30294048 | None:intergenic | 30.0% | |
| CTCAAATATTTGTAGGGATA+AGG | + | chr8.1:30294530-30294549 | None:intergenic | 30.0% | |
| CTTGATACTCTTTAACTAGA+CGG | - | chr8.1:30295928-30295947 | MS.gene76403:intron | 30.0% | |
| GAAAATTAAGAAGAAGGAGA+AGG | - | chr8.1:30293136-30293155 | MS.gene76403:CDS | 30.0% | |
| GACTACATATAAAATGATGC+AGG | - | chr8.1:30296115-30296134 | MS.gene76403:intron | 30.0% | |
| GTATGTTAAGGTAGATACTT+GGG | - | chr8.1:30294069-30294088 | MS.gene76403:intron | 30.0% | |
| TAAAAACTATTTCCCCAACA+AGG | + | chr8.1:30295532-30295551 | None:intergenic | 30.0% | |
| TAACAAAGAGTCGTATCTAA+AGG | + | chr8.1:30296148-30296167 | None:intergenic | 30.0% | |
| TAGAAAGCAACATTTCCTAT+AGG | + | chr8.1:30296029-30296048 | None:intergenic | 30.0% | |
| TATGTTAAGGTAGATACTTG+GGG | - | chr8.1:30294070-30294089 | MS.gene76403:intron | 30.0% | |
| TCTTCAATAATGTGACCAAA+GGG | - | chr8.1:30293937-30293956 | MS.gene76403:intron | 30.0% | |
| TGATCTTGCATATTGTGTAA+TGG | + | chr8.1:30293700-30293719 | None:intergenic | 30.0% | |
| TGCATATTGTGTAATGGTAA+AGG | + | chr8.1:30293694-30293713 | None:intergenic | 30.0% | |
| TGTATGTTAAGGTAGATACT+TGG | - | chr8.1:30294068-30294087 | MS.gene76403:intron | 30.0% | |
| TTAAACAAACCTATTTGTGG+CGG | - | chr8.1:30296049-30296068 | MS.gene76403:intron | 30.0% | |
| TTATCTAAATTGACAATGGC+AGG | - | chr8.1:30295054-30295073 | MS.gene76403:intron | 30.0% | |
| TTGATACTCTTTAACTAGAC+GGG | - | chr8.1:30295929-30295948 | MS.gene76403:intron | 30.0% | |
| TTGGTATGATTCTTCAATCT+GGG | - | chr8.1:30294953-30294972 | MS.gene76403:intron | 30.0% | |
| TTTGGTATGATTCTTCAATC+TGG | - | chr8.1:30294952-30294971 | MS.gene76403:intron | 30.0% | |
| ! | ATGAAGAGAAGTTTTACTTC+TGG | + | chr8.1:30293367-30293386 | None:intergenic | 30.0% |
| ! | TATGTTTAAGCTTTGTGACT+AGG | - | chr8.1:30294827-30294846 | MS.gene76403:intron | 30.0% |
| ! | TGAGTAACAAAAAAGTGTGT+CGG | - | chr8.1:30293853-30293872 | MS.gene76403:intron | 30.0% |
| !! | ATTCCTAAAGCACTCATTTT+AGG | + | chr8.1:30295422-30295441 | None:intergenic | 30.0% |
| !! | CAATGAGAAGTATTTATAGC+TGG | + | chr8.1:30295626-30295645 | None:intergenic | 30.0% |
| !! | GAAGTATTTATAGCTGGTTT+TGG | + | chr8.1:30295620-30295639 | None:intergenic | 30.0% |
| !! | TCTAGTTAAAGAGTATCAAG+TGG | + | chr8.1:30295928-30295947 | None:intergenic | 30.0% |
| !!! | AATCGTTTTGAAGATTAACG+GGG | - | chr8.1:30293286-30293305 | MS.gene76403:intron | 30.0% |
| !!! | AGTAAGATCGAATGGTTTTT+TGG | + | chr8.1:30295109-30295128 | None:intergenic | 30.0% |
| !!! | CAATCGTTTTGAAGATTAAC+GGG | - | chr8.1:30293285-30293304 | MS.gene76403:intron | 30.0% |
| !!! | CACTAAATGTCATTTTTCGT+AGG | + | chr8.1:30294447-30294466 | None:intergenic | 30.0% |
| !!! | GTTTTTCTGATTTTTTTGGG+TGG | - | chr8.1:30294260-30294279 | MS.gene76403:intron | 30.0% |
| AAAACAGAAACAGATGCACA+AGG | + | chr8.1:30294245-30294264 | None:intergenic | 35.0% | |
| AAACAACAACACAGGAGAAA+AGG | + | chr8.1:30294629-30294648 | None:intergenic | 35.0% | |
| AACAATGACCGTAAGAAACT+AGG | + | chr8.1:30293750-30293769 | None:intergenic | 35.0% | |
| AACTACTTTGAGCAAACAGA+TGG | - | chr8.1:30295134-30295153 | MS.gene76403:intron | 35.0% | |
| AACTTGTGCATTTACCTTGT+TGG | - | chr8.1:30295515-30295534 | MS.gene76403:intron | 35.0% | |
| ACTCTAAACATATGGGATGT+TGG | - | chr8.1:30295080-30295099 | MS.gene76403:intron | 35.0% | |
| ACTTCTCTTGAAGTTATCCA+GGG | + | chr8.1:30296365-30296384 | None:intergenic | 35.0% | |
| ACTTGTGCATTTACCTTGTT+GGG | - | chr8.1:30295516-30295535 | MS.gene76403:intron | 35.0% | |
| AGAGGTCTGTTCAATACAAA+TGG | - | chr8.1:30295235-30295254 | MS.gene76403:intron | 35.0% | |
| AGTTGCAATTGTTATGCAGT+GGG | - | chr8.1:30293240-30293259 | MS.gene76403:intron | 35.0% | |
| ATATTTACCAATGCCTTCAG+TGG | - | chr8.1:30295440-30295459 | MS.gene76403:intron | 35.0% | |
| ATCCTAGGGATTGTATGTTA+AGG | - | chr8.1:30294057-30294076 | MS.gene76403:intron | 35.0% | |
| ATGACAATATATGGAAACCC+TGG | - | chr8.1:30296345-30296364 | MS.gene76403:intron | 35.0% | |
| ATGTTAAGGTAGATACTTGG+GGG | - | chr8.1:30294071-30294090 | MS.gene76403:intron | 35.0% | |
| ATTCACAATCCAGATCGTTA+GGG | + | chr8.1:30293826-30293845 | None:intergenic | 35.0% | |
| CAGGTACACTCTAAACATAT+GGG | - | chr8.1:30295073-30295092 | MS.gene76403:intron | 35.0% | |
| CATACATACCACAAAGAACA+TGG | + | chr8.1:30296096-30296115 | None:intergenic | 35.0% | |
| CTTCAATAATGTGACCAAAG+GGG | - | chr8.1:30293938-30293957 | MS.gene76403:intron | 35.0% | |
| GAAGGAAATGCGAATTCTTA+TGG | - | chr8.1:30293154-30293173 | MS.gene76403:CDS | 35.0% | |
| GCACAAGTTATCATAAGGAA+AGG | + | chr8.1:30295504-30295523 | None:intergenic | 35.0% | |
| GGTCAAACTAGTTATCTCTT+GGG | - | chr8.1:30296592-30296611 | MS.gene76403:CDS | 35.0% | |
| GTAAGTGTCTATTTGTCTGT+AGG | + | chr8.1:30294425-30294444 | None:intergenic | 35.0% | |
| GTCATAATTATCTTCCTGCA+AGG | - | chr8.1:30295974-30295993 | MS.gene76403:intron | 35.0% | |
| TACCTTAACATACAATCCCT+AGG | + | chr8.1:30294062-30294081 | None:intergenic | 35.0% | |
| TAGTTGCAATTGTTATGCAG+TGG | - | chr8.1:30293239-30293258 | MS.gene76403:intron | 35.0% | |
| TATTCACAATCCAGATCGTT+AGG | + | chr8.1:30293827-30293846 | None:intergenic | 35.0% | |
| TATTTGGCATGCTACCATTT+GGG | - | chr8.1:30293887-30293906 | MS.gene76403:intron | 35.0% | |
| TCTGTTGAAACATTACTGCA+AGG | + | chr8.1:30296400-30296419 | None:intergenic | 35.0% | |
| TTATTTGGCATGCTACCATT+TGG | - | chr8.1:30293886-30293905 | MS.gene76403:intron | 35.0% | |
| TTCATATGACAGAGACTATC+TGG | - | chr8.1:30295732-30295751 | MS.gene76403:intron | 35.0% | |
| TTGCCTAAAATGAGTGCTTT+AGG | - | chr8.1:30295416-30295435 | MS.gene76403:intron | 35.0% | |
| ! | ACGTTTTCATCATATTTCGC+AGG | + | chr8.1:30294747-30294766 | None:intergenic | 35.0% |
| ! | AGAGAAGTTTTACTTCTGGT+AGG | + | chr8.1:30293363-30293382 | None:intergenic | 35.0% |
| ! | AGATAACCTTCTAAAGGAAG+AGG | - | chr8.1:30295217-30295236 | MS.gene76403:intron | 35.0% |
| ! | AGGGATAAGGGTATAATTGT+TGG | + | chr8.1:30294517-30294536 | None:intergenic | 35.0% |
| ! | AGTAACAAAAAAGTGTGTCG+GGG | - | chr8.1:30293855-30293874 | MS.gene76403:intron | 35.0% |
| ! | ATAACTAGTTTGACCCATTG+TGG | + | chr8.1:30296587-30296606 | None:intergenic | 35.0% |
| ! | CGATGTGTCTTTTCTACAAA+TGG | - | chr8.1:30294027-30294046 | MS.gene76403:intron | 35.0% |
| ! | CGTTTTCATCATATTTCGCA+GGG | + | chr8.1:30294746-30294765 | None:intergenic | 35.0% |
| ! | GAGTAACAAAAAAGTGTGTC+GGG | - | chr8.1:30293854-30293873 | MS.gene76403:intron | 35.0% |
| ! | GGATAAGGGTATAATTGTTG+GGG | + | chr8.1:30294515-30294534 | None:intergenic | 35.0% |
| ! | GGGATAAGGGTATAATTGTT+GGG | + | chr8.1:30294516-30294535 | None:intergenic | 35.0% |
| ! | GTCTTTTCTACAAATGGTGT+TGG | - | chr8.1:30294033-30294052 | MS.gene76403:intron | 35.0% |
| ! | TGTGAATAAGAACGTGCTTT+TGG | - | chr8.1:30293499-30293518 | MS.gene76403:intron | 35.0% |
| ! | TTCTTAATTTGGTACGGTTG+TGG | - | chr8.1:30293610-30293629 | MS.gene76403:intron | 35.0% |
| ! | TTTTAGGCAACTACTATGCT+TGG | + | chr8.1:30295406-30295425 | None:intergenic | 35.0% |
| !! | CTTACCTTAGCTATTTCTTC+TGG | + | chr8.1:30295810-30295829 | None:intergenic | 35.0% |
| !! | GGTTTTGATGTTGAATCCAA+GGG | + | chr8.1:30293336-30293355 | None:intergenic | 35.0% |
| !! | GTTTTCGGATCCTTTTGTTT+TGG | - | chr8.1:30294113-30294132 | MS.gene76403:CDS | 35.0% |
| !! | TAGCTGTTTTCGTGAAACAA+GGG | - | chr8.1:30296503-30296522 | MS.gene76403:intron | 35.0% |
| !! | TTAGCTGTTTTCGTGAAACA+AGG | - | chr8.1:30296502-30296521 | MS.gene76403:intron | 35.0% |
| !!! | GACACACTTTTTTGTTACTC+AGG | + | chr8.1:30293854-30293873 | None:intergenic | 35.0% |
| !!! | TCTGATTTTTTTGGGTGGTT+TGG | - | chr8.1:30294265-30294284 | MS.gene76403:intron | 35.0% |
| !!! | TGGTTTTGATGTTGAATCCA+AGG | + | chr8.1:30293337-30293356 | None:intergenic | 35.0% |
| AACAGACCTCTTCCTTTAGA+AGG | + | chr8.1:30295226-30295245 | None:intergenic | 40.0% | |
| AACATAAACGACTCAAAGCC+AGG | + | chr8.1:30294813-30294832 | None:intergenic | 40.0% | |
| AGATCTTGCATCAGATCGAA+TGG | + | chr8.1:30295011-30295030 | None:intergenic | 40.0% | |
| ATCTTGCATCAGATCGAATG+GGG | + | chr8.1:30295009-30295028 | None:intergenic | 40.0% | |
| CAATTGGGCCTCTAAATTGT+AGG | + | chr8.1:30294328-30294347 | None:intergenic | 40.0% | |
| CACTTCTCTTGAAGTTATCC+AGG | + | chr8.1:30296366-30296385 | None:intergenic | 40.0% | |
| CTAAACATATGGGATGTTGG+AGG | - | chr8.1:30295083-30295102 | MS.gene76403:intron | 40.0% | |
| CTTGTGCATTTACCTTGTTG+GGG | - | chr8.1:30295517-30295536 | MS.gene76403:intron | 40.0% | |
| CTTTGAGCAAACAGATGGTT+TGG | - | chr8.1:30295139-30295158 | MS.gene76403:intron | 40.0% | |
| GAAAGGAAAGTAGCTGCTAA+CGG | + | chr8.1:30295487-30295506 | None:intergenic | 40.0% | |
| GAGTGAAATCGCTAAATCGA+GGG | + | chr8.1:30293801-30293820 | None:intergenic | 40.0% | |
| GATCTTGCATCAGATCGAAT+GGG | + | chr8.1:30295010-30295029 | None:intergenic | 40.0% | |
| GCAGGTACACTCTAAACATA+TGG | - | chr8.1:30295072-30295091 | MS.gene76403:intron | 40.0% | |
| GCTCTTTCACTTCTTGTTAG+GGG | - | chr8.1:30294661-30294680 | MS.gene76403:intron | 40.0% | |
| GCTGTTAACCATGTTCTTTG+TGG | - | chr8.1:30296085-30296104 | MS.gene76403:intron | 40.0% | |
| GCTTGGATACATTAGCAAAG+AGG | + | chr8.1:30295389-30295408 | None:intergenic | 40.0% | |
| GGAGCTAGATAACCTTCTAA+AGG | - | chr8.1:30295211-30295230 | MS.gene76403:intron | 40.0% | |
| GGCCTCTAAATTGTAGGAAA+CGG | + | chr8.1:30294322-30294341 | None:intergenic | 40.0% | |
| GGCTCTTTCACTTCTTGTTA+GGG | - | chr8.1:30294660-30294679 | MS.gene76403:intron | 40.0% | |
| GGGTCAAACTAGTTATCTCT+TGG | - | chr8.1:30296591-30296610 | MS.gene76403:CDS | 40.0% | |
| GTAGACAATCTCATCTAGCA+AGG | + | chr8.1:30296242-30296261 | None:intergenic | 40.0% | |
| GTTTCTCCAGTAAGATCGAA+TGG | + | chr8.1:30295117-30295136 | None:intergenic | 40.0% | |
| TAATGTGACCAAAGGGGTTA+AGG | - | chr8.1:30293944-30293963 | MS.gene76403:intron | 40.0% | |
| TAGCTGCTAACGGAATAAAC+AGG | + | chr8.1:30295477-30295496 | None:intergenic | 40.0% | |
| TCTTGATTCTGACAACCTTG+AGG | - | chr8.1:30295028-30295047 | MS.gene76403:intron | 40.0% | |
| TGAGTGAAATCGCTAAATCG+AGG | + | chr8.1:30293802-30293821 | None:intergenic | 40.0% | |
| TGCACCAGAAGAAATAGCTA+AGG | - | chr8.1:30295803-30295822 | MS.gene76403:intron | 40.0% | |
| TTCACAATCCAGATCGTTAG+GGG | + | chr8.1:30293825-30293844 | None:intergenic | 40.0% | |
| TTGATGTTGAATCCAAGGGT+AGG | + | chr8.1:30293332-30293351 | None:intergenic | 40.0% | |
| TTGTGGCGGTAAACAAGATA+CGG | - | chr8.1:30296063-30296082 | MS.gene76403:intron | 40.0% | |
| TTTCACTTCTTGTTAGGGGT+TGG | - | chr8.1:30294665-30294684 | MS.gene76403:intron | 40.0% | |
| ! | ACAAATGGTGTTGGAATCCT+AGG | - | chr8.1:30294042-30294061 | MS.gene76403:intron | 40.0% |
| ! | AGCTTTTCACAACACCCAAA+TGG | + | chr8.1:30293904-30293923 | None:intergenic | 40.0% |
| ! | ATTTTATCTGGGCCTGATCT+TGG | - | chr8.1:30295834-30295853 | MS.gene76403:intron | 40.0% |
| ! | CAAATGGTGTTGGAATCCTA+GGG | - | chr8.1:30294043-30294062 | MS.gene76403:intron | 40.0% |
| ! | CTAGAATGATGGAGAGAACA+GGG | + | chr8.1:30293193-30293212 | None:intergenic | 40.0% |
| ! | GTTTTACTTCTGGTAGGTGA+TGG | + | chr8.1:30293357-30293376 | None:intergenic | 40.0% |
| ! | TCTAGAATGATGGAGAGAAC+AGG | + | chr8.1:30293194-30293213 | None:intergenic | 40.0% |
| ! | TCTTGTTTACCGCCACAAAT+AGG | + | chr8.1:30296061-30296080 | None:intergenic | 40.0% |
| !! | AAAAAGTGTGTCGGGGTTTT+TGG | - | chr8.1:30293862-30293881 | MS.gene76403:intron | 40.0% |
| !! | AGATACTTGGGGGTATGTTT+TGG | - | chr8.1:30294081-30294100 | MS.gene76403:intron | 40.0% |
| !! | AGCAAACAGATGGTTTGGTT+TGG | - | chr8.1:30295144-30295163 | MS.gene76403:intron | 40.0% |
| !! | AGCTATTTCTTCTGGTGCAA+GGG | + | chr8.1:30295802-30295821 | None:intergenic | 40.0% |
| !! | ATACTTGGGGGTATGTTTTG+GGG | - | chr8.1:30294083-30294102 | MS.gene76403:intron | 40.0% |
| !! | GATACTTGGGGGTATGTTTT+GGG | - | chr8.1:30294082-30294101 | MS.gene76403:intron | 40.0% |
| !! | GCAAACAGATGGTTTGGTTT+GGG | - | chr8.1:30295145-30295164 | MS.gene76403:intron | 40.0% |
| !! | TAGCTATTTCTTCTGGTGCA+AGG | + | chr8.1:30295803-30295822 | None:intergenic | 40.0% |
| !!! | TTTTGGGGAGTTGCTGTTTT+CGG | - | chr8.1:30294098-30294117 | MS.gene76403:CDS | 40.0% |
| !!! | TTTTTTGGGTGGTTTGGCTT+AGG | - | chr8.1:30294271-30294290 | MS.gene76403:intron | 40.0% |
| AACAACACAGGAGAAAAGGC+CGG | + | chr8.1:30294625-30294644 | None:intergenic | 45.0% | |
| AGCTAGGCCTCCAATTTATG+GGG | + | chr8.1:30294556-30294575 | None:intergenic | 45.0% | |
| AGGACATTAAGGTGATGTCG+TGG | - | chr8.1:30293976-30293995 | MS.gene76403:intron | 45.0% | |
| AGTTTGACCCATTGTGGTTC+AGG | + | chr8.1:30296581-30296600 | None:intergenic | 45.0% | |
| ATAACTACTCGTCGGCCTAT+AGG | - | chr8.1:30296011-30296030 | MS.gene76403:intron | 45.0% | |
| ATTTGAGCCCCCCCATAAAT+TGG | - | chr8.1:30294543-30294562 | MS.gene76403:intron | 45.0% | |
| CAAAGGGGTTAAGGAATTGG+TGG | - | chr8.1:30293953-30293972 | MS.gene76403:intron | 45.0% | |
| CACCAATTCCTTAACCCCTT+TGG | + | chr8.1:30293955-30293974 | None:intergenic | 45.0% | |
| CAGCATGGCACCAAAACAAA+AGG | + | chr8.1:30294126-30294145 | None:intergenic | 45.0% | |
| CAGTTCGGATCTGAGAAGAT+TGG | - | chr8.1:30295175-30295194 | MS.gene76403:intron | 45.0% | |
| CCAGGATCGTTAGAATCGTA+TGG | + | chr8.1:30294795-30294814 | None:intergenic | 45.0% | |
| CCATACGATTCTAACGATCC+TGG | - | chr8.1:30294792-30294811 | MS.gene76403:CDS | 45.0% | |
| CGATGGATAAATCTCGACAC+TGG | - | chr8.1:30296687-30296706 | MS.gene76403:intron | 45.0% | |
| CGGCTCTTTCACTTCTTGTT+AGG | - | chr8.1:30294659-30294678 | MS.gene76403:intron | 45.0% | |
| GACCAAAGGGGTTAAGGAAT+TGG | - | chr8.1:30293950-30293969 | MS.gene76403:intron | 45.0% | |
| GAGCTAGGCCTCCAATTTAT+GGG | + | chr8.1:30294557-30294576 | None:intergenic | 45.0% | |
| GCAATTGTTATGCAGTGGGT+TGG | - | chr8.1:30293244-30293263 | MS.gene76403:intron | 45.0% | |
| GCTTGAGGGATTTGATTGGT+TGG | - | chr8.1:30296748-30296767 | MS.gene76403:CDS | 45.0% | |
| GCTTGCTTGAGGGATTTGAT+TGG | - | chr8.1:30296744-30296763 | MS.gene76403:CDS | 45.0% | |
| GGAATTGGTGGAGGACATTA+AGG | - | chr8.1:30293965-30293984 | MS.gene76403:intron | 45.0% | |
| GGACATTAAGGTGATGTCGT+GGG | - | chr8.1:30293977-30293996 | MS.gene76403:intron | 45.0% | |
| GGCCGTTTCCTACAATTTAG+AGG | - | chr8.1:30294317-30294336 | MS.gene76403:intron | 45.0% | |
| GGGCACAAAAACAACAACAC+AGG | + | chr8.1:30294637-30294656 | None:intergenic | 45.0% | |
| GGGGGGCTCAAATATTTGTA+GGG | + | chr8.1:30294536-30294555 | None:intergenic | 45.0% | |
| GGGTATAATTGTTGGGGTGT+AGG | + | chr8.1:30294509-30294528 | None:intergenic | 45.0% | |
| GGTTTGGGTAGTTGACAGTT+CGG | - | chr8.1:30295160-30295179 | MS.gene76403:intron | 45.0% | |
| GTCGAGCAAGTAGATTCTAG+AGG | + | chr8.1:30296786-30296805 | None:intergenic | 45.0% | |
| TAAATTGTAGGAAACGGCCC+TGG | + | chr8.1:30294316-30294335 | None:intergenic | 45.0% | |
| TAAGATAAGTGCAGCCTTGC+AGG | + | chr8.1:30295991-30296010 | None:intergenic | 45.0% | |
| TCGCAGGGATTTACTCAACT+CGG | + | chr8.1:30294731-30294750 | None:intergenic | 45.0% | |
| TCTCGACACTGGATGATAGT+TGG | - | chr8.1:30296698-30296717 | MS.gene76403:intron | 45.0% | |
| TGGGTCTTCTCAGCATCATT+CGG | - | chr8.1:30293114-30293133 | MS.gene76403:CDS | 45.0% | |
| TTAAGGTGATGTCGTGGGAA+TGG | - | chr8.1:30293982-30294001 | MS.gene76403:intron | 45.0% | |
| ! | AGATTCTAGAGGCTATGTCC+TGG | + | chr8.1:30296775-30296794 | None:intergenic | 45.0% |
| ! | AGGGTTTTCGCGATTCTGAT+CGG | + | chr8.1:30293782-30293801 | None:intergenic | 45.0% |
| !! | GGATTTGCTGTATCCACTGA+AGG | + | chr8.1:30295456-30295475 | None:intergenic | 45.0% |
| !!! | CGTTTTGAAGATTAACGGGG+AGG | - | chr8.1:30293289-30293308 | MS.gene76403:intron | 45.0% |
| !!! | GTCGGGGTTTTTGGCTTATT+TGG | - | chr8.1:30293871-30293890 | MS.gene76403:intron | 45.0% |
| !!! | GTTGTTGTTTTTGTGCCCAG+CGG | - | chr8.1:30294639-30294658 | MS.gene76403:intron | 45.0% |
| !!! | GTTTTGGTGCCATGCTGTTT+TGG | - | chr8.1:30294129-30294148 | MS.gene76403:CDS | 45.0% |
| ACAAGAAGTGAAAGAGCCGC+TGG | + | chr8.1:30294658-30294677 | None:intergenic | 50.0% | |
| AGGGGTTAAGGAATTGGTGG+AGG | - | chr8.1:30293956-30293975 | MS.gene76403:intron | 50.0% | |
| CAAGAAGTGAAAGAGCCGCT+GGG | + | chr8.1:30294657-30294676 | None:intergenic | 50.0% | |
| CCTGCGAAGTTACCAAGATC+AGG | + | chr8.1:30295849-30295868 | None:intergenic | 50.0% | |
| CGCAGGGATTTACTCAACTC+GGG | + | chr8.1:30294730-30294749 | None:intergenic | 50.0% | |
| CTAGGCCTCCAATTTATGGG+GGG | + | chr8.1:30294554-30294573 | None:intergenic | 50.0% | |
| CTGATATGCTCTAACTGCGC+AGG | - | chr8.1:30296649-30296668 | MS.gene76403:intron | 50.0% | |
| GCTAGGCCTCCAATTTATGG+GGG | + | chr8.1:30294555-30294574 | None:intergenic | 50.0% | |
| GGAGCTAGGCCTCCAATTTA+TGG | + | chr8.1:30294558-30294577 | None:intergenic | 50.0% | |
| GGGGGGGCTCAAATATTTGT+AGG | + | chr8.1:30294537-30294556 | None:intergenic | 50.0% | |
| TAGGCCTCCAATTTATGGGG+GGG | + | chr8.1:30294553-30294572 | None:intergenic | 50.0% | |
| TGTAGTGCGTACACTGGTGA+GGG | - | chr8.1:30296722-30296741 | MS.gene76403:intron | 50.0% | |
| TTCACTCACCCCTAACGATC+TGG | - | chr8.1:30293814-30293833 | MS.gene76403:intron | 50.0% | |
| ! | CCTGATCTTGGTAACTTCGC+AGG | - | chr8.1:30295846-30295865 | MS.gene76403:intron | 50.0% |
| ! | GCTGTATCCACTGAAGGCAT+TGG | + | chr8.1:30295450-30295469 | None:intergenic | 50.0% |
| ! | GGGATTTGATTGGTTGGTCC+AGG | - | chr8.1:30296754-30296773 | MS.gene76403:CDS | 50.0% |
| ! | GGGTTTTCGCGATTCTGATC+GGG | + | chr8.1:30293781-30293800 | None:intergenic | 50.0% |
| ! | GGTGTTGAACTTGGAAGCGA+TGG | - | chr8.1:30296670-30296689 | MS.gene76403:intron | 50.0% |
| !! | AACTGCGCAGGTGTTGAACT+TGG | - | chr8.1:30296661-30296680 | MS.gene76403:intron | 50.0% |
| !! | GCAGTGGGTTGGACAATTCA+GGG | - | chr8.1:30293255-30293274 | MS.gene76403:intron | 50.0% |
| !! | TGCAGTGGGTTGGACAATTC+AGG | - | chr8.1:30293254-30293273 | MS.gene76403:intron | 50.0% |
| AGCGTCATCAGTCCTACCCT+TGG | - | chr8.1:30293317-30293336 | MS.gene76403:intron | 55.0% | |
| AGTTCAGGGCTGTGGCTTCT+CGG | - | chr8.1:30294174-30294193 | MS.gene76403:intron | 55.0% | |
| CTGTAGTGCGTACACTGGTG+AGG | - | chr8.1:30296721-30296740 | MS.gene76403:intron | 55.0% | |
| GCAAGGAGCTCTATGGAGCT+AGG | + | chr8.1:30294572-30294591 | None:intergenic | 55.0% | |
| GGCAAGAGCAAGGAGCTCTA+TGG | + | chr8.1:30294579-30294598 | None:intergenic | 55.0% | |
| GTTGGCTGTAGTGCGTACAC+TGG | - | chr8.1:30296716-30296735 | MS.gene76403:intron | 55.0% | |
| TGAGCCCCCCCATAAATTGG+AGG | - | chr8.1:30294546-30294565 | MS.gene76403:intron | 55.0% | |
| ! | ACTGGTGAGGGCTTGCTTGA+GGG | - | chr8.1:30296734-30296753 | MS.gene76403:intron | 55.0% |
| ! | GGGTGGTTTGGCTTAGGTGT+TGG | - | chr8.1:30294277-30294296 | MS.gene76403:intron | 55.0% |
| !!! | TGCCATGCTGTTTTGGCGCT+GGG | - | chr8.1:30294136-30294155 | MS.gene76403:CDS | 55.0% |
| AGGAAACGGCCCTGGCTACA+CGG | + | chr8.1:30294308-30294327 | None:intergenic | 60.0% | |
| CACCCAGCGCCAAAACAGCA+TGG | + | chr8.1:30294141-30294160 | None:intergenic | 60.0% | |
| GAGAAGCCACAGCCCTGAAC+TGG | + | chr8.1:30294175-30294194 | None:intergenic | 60.0% | |
| GGCTGCGGTCTTCCAGTTCA+GGG | - | chr8.1:30294160-30294179 | MS.gene76403:intron | 60.0% | |
| GGTCTTCCAGTTCAGGGCTG+TGG | - | chr8.1:30294166-30294185 | MS.gene76403:intron | 60.0% | |
| TCCTTGCTCTTGCCCAGCGA+CGG | - | chr8.1:30294585-30294604 | MS.gene76403:intron | 60.0% | |
| TGGCTGCGGTCTTCCAGTTC+AGG | - | chr8.1:30294159-30294178 | MS.gene76403:intron | 60.0% | |
| ! | CACTGGTGAGGGCTTGCTTG+AGG | - | chr8.1:30296733-30296752 | MS.gene76403:intron | 60.0% |
| !! | TTGGCCTTGCCGTGTAGCCA+GGG | - | chr8.1:30294296-30294315 | MS.gene76403:intron | 60.0% |
| !!! | CATGCTGTTTTGGCGCTGGG+TGG | - | chr8.1:30294139-30294158 | MS.gene76403:CDS | 60.0% |
| !!! | GTGCCATGCTGTTTTGGCGC+TGG | - | chr8.1:30294135-30294154 | MS.gene76403:CDS | 60.0% |
| CCTTGCTCTTGCCCAGCGAC+GGG | - | chr8.1:30294586-30294605 | MS.gene76403:intron | 65.0% | |
| GCTGTGGCTTCTCGGCAGTG+GGG | - | chr8.1:30294182-30294201 | MS.gene76403:intron | 65.0% | |
| GGCTGTGGCTTCTCGGCAGT+GGG | - | chr8.1:30294181-30294200 | MS.gene76403:intron | 65.0% | |
| TCGGCAGTGGGGTCTGTCTG+TGG | - | chr8.1:30294193-30294212 | MS.gene76403:intron | 65.0% | |
| !! | AAAAGGCCGGTGCTGCACGC+AGG | + | chr8.1:30294612-30294631 | None:intergenic | 65.0% |
| !! | GTTGGCCTTGCCGTGTAGCC+AGG | - | chr8.1:30294295-30294314 | MS.gene76403:intron | 65.0% |
| !! | GTTTTGGCGCTGGGTGGCTG+CGG | - | chr8.1:30294145-30294164 | MS.gene76403:CDS | 65.0% |
| ACGGCCCTGGCTACACGGCA+AGG | + | chr8.1:30294303-30294322 | None:intergenic | 70.0% | |
| CCCGTCGCTGGGCAAGAGCA+AGG | + | chr8.1:30294589-30294608 | None:intergenic | 70.0% | |
| GGGCTGTGGCTTCTCGGCAG+TGG | - | chr8.1:30294180-30294199 | MS.gene76403:intron | 70.0% | |
| CTGCACGCAGGCCCGTCGCT+GGG | + | chr8.1:30294600-30294619 | None:intergenic | 75.0% | |
| GACGGGCCTGCGTGCAGCAC+CGG | - | chr8.1:30294603-30294622 | MS.gene76403:intron | 75.0% | |
| ! | GCTGCACGCAGGCCCGTCGC+TGG | + | chr8.1:30294601-30294620 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 30293113 | 30296808 | 30293113 | ID=MS.gene76403 |
| chr8.1 | mRNA | 30293113 | 30296808 | 30293113 | ID=MS.gene76403.t1;Parent=MS.gene76403 |
| chr8.1 | exon | 30296744 | 30296808 | 30296744 | ID=MS.gene76403.t1.exon1;Parent=MS.gene76403.t1 |
| chr8.1 | CDS | 30296744 | 30296808 | 30296744 | ID=cds.MS.gene76403.t1;Parent=MS.gene76403.t1 |
| chr8.1 | exon | 30296552 | 30296662 | 30296552 | ID=MS.gene76403.t1.exon2;Parent=MS.gene76403.t1 |
| chr8.1 | CDS | 30296552 | 30296662 | 30296552 | ID=cds.MS.gene76403.t1;Parent=MS.gene76403.t1 |
| chr8.1 | exon | 30294683 | 30294845 | 30294683 | ID=MS.gene76403.t1.exon3;Parent=MS.gene76403.t1 |
| chr8.1 | CDS | 30294683 | 30294845 | 30294683 | ID=cds.MS.gene76403.t1;Parent=MS.gene76403.t1 |
| chr8.1 | exon | 30294097 | 30294177 | 30294097 | ID=MS.gene76403.t1.exon4;Parent=MS.gene76403.t1 |
| chr8.1 | CDS | 30294097 | 30294177 | 30294097 | ID=cds.MS.gene76403.t1;Parent=MS.gene76403.t1 |
| chr8.1 | exon | 30293113 | 30293250 | 30293113 | ID=MS.gene76403.t1.exon5;Parent=MS.gene76403.t1 |
| chr8.1 | CDS | 30293113 | 30293250 | 30293113 | ID=cds.MS.gene76403.t1;Parent=MS.gene76403.t1 |
| Gene Sequence |
| Protein sequence |
