AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57565


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57565.t1 MTR_4g126140 94.949 594 27 2 1 594 149 739 0.0 1155
MS.gene57565.t1 MTR_1g475240 50.664 602 260 4 6 588 190 773 0.0 589
MS.gene57565.t1 MTR_1g075190 50.664 602 260 4 6 588 190 773 0.0 589
MS.gene57565.t1 MTR_8g066010 79.381 388 47 7 40 415 1 367 0.0 577
MS.gene57565.t1 MTR_6g084410 47.602 563 283 4 24 584 208 760 1.27e-161 482
MS.gene57565.t1 MTR_6g008410 43.924 576 283 5 24 584 146 696 1.36e-147 452
MS.gene57565.t1 MTR_8g104340 42.336 548 269 7 22 565 99 603 1.88e-133 404
MS.gene57565.t1 MTR_2g100660 41.768 577 303 10 34 586 171 738 3.28e-122 380
MS.gene57565.t1 MTR_8g104340 40.535 449 220 7 22 466 99 504 7.99e-98 308
MS.gene57565.t1 MTR_8g104340 42.133 375 174 6 22 396 99 430 4.28e-88 281
MS.gene57565.t1 MTR_1g050760 39.189 148 83 3 441 585 39 182 3.31e-25 107
MS.gene57565.t1 MTR_1g050760 39.189 148 83 3 441 585 154 297 1.24e-24 107
MS.gene57565.t1 MTR_4g067300 37.569 181 102 4 399 579 135 304 3.00e-23 103
MS.gene57565.t1 MTR_4g120880 39.490 157 82 4 433 586 185 331 2.78e-19 90.1
MS.gene57565.t1 MTR_1g097730 68.966 58 11 1 178 235 1 51 4.07e-17 75.9
MS.gene57565.t1 MTR_4g120880 40.000 125 69 2 433 554 185 306 8.27e-17 82.0
MS.gene57565.t1 MTR_6g004480 28.780 205 139 3 386 586 89 290 1.88e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57565.t1 AT4G29750 60.544 588 213 5 2 586 217 788 0.0 702
MS.gene57565.t1 AT4G29750 60.544 588 213 5 2 586 217 788 0.0 701
MS.gene57565.t1 AT3G23070 47.466 592 282 6 17 594 209 785 1.36e-176 523
MS.gene57565.t1 AT4G14510 47.300 611 271 7 17 588 210 808 1.40e-174 518
MS.gene57565.t1 AT3G18390 45.918 588 291 7 8 584 221 792 1.84e-165 493
MS.gene57565.t1 AT3G01370 44.118 578 302 5 16 584 153 718 8.09e-153 465
MS.gene57565.t1 AT5G16180 37.372 586 311 5 7 589 185 717 2.35e-112 352
MS.gene57565.t1 AT5G16180 35.523 411 210 4 7 415 185 542 2.93e-62 215
MS.gene57565.t1 AT3G25440 37.805 164 94 3 436 594 13 173 1.36e-26 110
MS.gene57565.t1 AT3G25440 37.805 164 94 3 436 594 13 173 1.36e-26 110
MS.gene57565.t1 AT3G25440 37.805 164 94 3 436 594 13 173 1.36e-26 110
MS.gene57565.t1 AT3G25440 36.612 183 105 4 420 594 85 264 1.45e-26 112
MS.gene57565.t1 AT3G25440 36.612 183 105 4 420 594 149 328 2.11e-26 112
MS.gene57565.t1 AT2G28480 39.645 169 91 4 411 579 138 295 1.36e-24 106
MS.gene57565.t1 AT4G13070 40.000 140 75 4 435 573 173 304 6.74e-21 94.7
MS.gene57565.t1 AT3G27550 30.573 157 103 2 433 586 133 286 4.39e-14 75.5
MS.gene57565.t1 AT3G27550 30.573 157 103 2 433 586 77 230 5.55e-14 75.1
MS.gene57565.t1 AT3G27550 30.573 157 103 2 433 586 77 230 5.55e-14 75.1

Find 141 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCGTGACAACAAGCTTT+TGG 0.215837 8.4:-8777383 None:intergenic
AACCTTACTTTCTAGAAATA+AGG 0.223126 8.4:+8776481 MS.gene57565:CDS
AGGAATATATTGTAATTTAC+AGG 0.243412 8.4:+8776501 MS.gene57565:CDS
CAATTACCTGCTGTGGTTCC+AGG 0.270048 8.4:+8774299 MS.gene57565:CDS
CACGATAAATAATTATTATA+TGG 0.271438 8.4:-8777327 None:intergenic
TTCCCAACTTCTTGTTTACT+TGG 0.294491 8.4:-8776725 None:intergenic
TTGCTTAATCAGAGTAAAAC+TGG 0.294825 8.4:+8773942 MS.gene57565:intron
CTTTCTCTTCCTCGTCTTGT+TGG 0.296198 8.4:-8776589 None:intergenic
CATCCTATCATTAGATGTAT+AGG 0.301240 8.4:-8774607 None:intergenic
ATGAAGCCATACTTACTTCT+AGG 0.301568 8.4:+8777042 MS.gene57565:CDS
TAAGCATATTGCGATATCTT+TGG 0.302210 8.4:+8777255 MS.gene57565:CDS
AGGTTCAGTGTTGGAGTTGC+TGG 0.308508 8.4:+8773441 MS.gene57565:CDS
ACACCATATATCAGATTTAC+AGG 0.309479 8.4:+8777632 MS.gene57565:CDS
TTGTCTCTCAGTCAGGGTTT+TGG 0.325654 8.4:-8776552 None:intergenic
GAGATCTTTGTTTAGGAAGA+TGG 0.336007 8.4:+8777011 MS.gene57565:CDS
AGCAGACCTTCCAACTGATT+TGG 0.336227 8.4:+8776969 MS.gene57565:CDS
TCTCCTGTAAATCTGATATA+TGG 0.341489 8.4:-8777635 None:intergenic
ATGAAGAGAGATCTTTGTTT+AGG 0.342661 8.4:+8777004 MS.gene57565:CDS
CATGTCAGTCATTTCCTTGT+TGG 0.348961 8.4:-8774372 None:intergenic
TCTCAAATGCCGTTACTTGC+TGG 0.349600 8.4:+8776656 MS.gene57565:CDS
TTCCTTATTTCTAGAAAGTA+AGG 0.350503 8.4:-8776483 None:intergenic
AAATCAGTTGGAAGGTCTGC+TGG 0.363738 8.4:-8776967 None:intergenic
TGGGTCCGCGCTTCAAAGAT+TGG 0.371657 8.4:+8774243 MS.gene57565:CDS
GTATTAGTAGTTTGAAGAAA+AGG 0.382826 8.4:+8773334 MS.gene57565:CDS
TAGGGCAGCAACCGCCAATT+GGG 0.384752 8.4:+8776694 MS.gene57565:CDS
AACCTTCTGTTGGATGAGTT+GGG 0.390797 8.4:+8774224 MS.gene57565:CDS
TTCTTACCTAGAAGTAAGTA+TGG 0.393391 8.4:-8777048 None:intergenic
AAGGAGAAGTAATACTGAAT+TGG 0.396918 8.4:+8773353 MS.gene57565:CDS
TGCTGGTATTACTCAGGAAT+TGG 0.397390 8.4:+8773458 MS.gene57565:CDS
CAACCTTCTGTTGGATGAGT+TGG 0.405542 8.4:+8774223 MS.gene57565:CDS
ATCCTATCATTAGATGTATA+GGG 0.412690 8.4:-8774606 None:intergenic
CTAGGGCAGCAACCGCCAAT+TGG 0.414139 8.4:+8776693 MS.gene57565:CDS
GAGAAATACCTTGAGTTCTT+CGG 0.424079 8.4:-8774631 None:intergenic
CAACCAAGTAAACAAGAAGT+TGG 0.431444 8.4:+8776722 MS.gene57565:CDS
ATATCGCAATATGCTTAACT+TGG 0.431744 8.4:-8777249 None:intergenic
TTCTACGCAAGGCAGCTTGT+AGG 0.432727 8.4:-8774018 None:intergenic
ATAGGGAACTCCACGTTTGA+TGG 0.437793 8.4:-8774589 None:intergenic
ATGCATTTGCAGAAATTGAC+TGG 0.442160 8.4:+8776455 MS.gene57565:intron
ATTGGCGGAGAAGTTGATTC+CGG 0.442381 8.4:+8773371 MS.gene57565:CDS
GGTATTGTGGTGTGGCGATC+GGG 0.444388 8.4:+8773966 MS.gene57565:CDS
GTTGCAGAGACTGAGAAATA+TGG 0.447718 8.4:+8773401 MS.gene57565:CDS
ACTTGGTTGATGTCCCCAAT+TGG 0.449038 8.4:-8776708 None:intergenic
GAAGGATTTAGCTAAAATAC+AGG 0.450289 8.4:+8776933 MS.gene57565:CDS
TCTTACACGAAAGTATATAA+TGG 0.454878 8.4:+8774041 MS.gene57565:CDS
TCTCGATTAAAAGATTCAAT+AGG 0.464473 8.4:-8774143 None:intergenic
TTCCCTATACATCTAATGAT+AGG 0.466667 8.4:+8774604 MS.gene57565:CDS
AAGCTTGTTGTCACGAAGAC+AGG 0.466888 8.4:+8777387 MS.gene57565:CDS
TGGACAATTCAGAGGATGTT+GGG 0.467248 8.4:+8774078 MS.gene57565:CDS
AATGATGAGAGAATCTACTT+TGG 0.470218 8.4:+8776748 MS.gene57565:CDS
AATAATTATTATATGGCCCT+TGG 0.473196 8.4:-8777320 None:intergenic
GGTAATTGATCAGCATCAAC+AGG 0.474127 8.4:-8774284 None:intergenic
TGGAACCCTTGCTGAGACTA+GGG 0.474177 8.4:+8776676 MS.gene57565:CDS
AGATCTTTGTTTAGGAAGAT+GGG 0.477491 8.4:+8777012 MS.gene57565:CDS
CTGGAACCCTTGCTGAGACT+AGG 0.478799 8.4:+8776675 MS.gene57565:CDS
CATTCAGACTTCTTCCGTAT+GGG 0.480915 8.4:+8774333 MS.gene57565:CDS
GATCGAACTCAACCTTCTGT+TGG 0.482859 8.4:+8774214 MS.gene57565:CDS
AGACTCTGCAGAGTATTTGA+AGG 0.486990 8.4:+8774163 MS.gene57565:CDS
TGAAATAAGTGTGAAAGAAA+TGG 0.489780 8.4:+8774115 MS.gene57565:CDS
TTGATCAGCATCAACAGGTA+AGG 0.490123 8.4:-8774279 None:intergenic
AGGTATTGTGGTGTGGCGAT+CGG 0.490697 8.4:+8773965 MS.gene57565:CDS
AGTCTCTGCAACTCATGTTC+CGG 0.491693 8.4:-8773390 None:intergenic
AACCAAGTAAACAAGAAGTT+GGG 0.491842 8.4:+8776723 MS.gene57565:CDS
GTTAATGTCTCCAAATCAGT+TGG 0.506886 8.4:-8776979 None:intergenic
CCATTCAGACTTCTTCCGTA+TGG 0.509793 8.4:+8774332 MS.gene57565:CDS
CATATAATAATTATTTATCG+TGG 0.512686 8.4:+8777328 MS.gene57565:CDS
TTATACCCTGGAACCACAGC+AGG 0.514036 8.4:-8774305 None:intergenic
TGCATTTGCAGAAATTGACT+GGG 0.522489 8.4:+8776456 MS.gene57565:intron
CACGAAAGTATATAATGGTA+AGG 0.522498 8.4:+8774046 MS.gene57565:CDS
TGCTGATCAATTACCTGCTG+TGG 0.523115 8.4:+8774292 MS.gene57565:CDS
GGTAGGCGGGATGTTTATGC+TGG 0.532035 8.4:+8777151 MS.gene57565:intron
ACGGCGCCACACTTTGCCCT+TGG 0.532852 8.4:+8774413 MS.gene57565:CDS
GAGAAGTAATACTGAATTGG+CGG 0.534782 8.4:+8773356 MS.gene57565:CDS
AAACAAGGTTTCACCCCATA+CGG 0.539368 8.4:-8774347 None:intergenic
CATGAGTGAAGAAGAATCGA+TGG 0.544193 8.4:+8774187 MS.gene57565:CDS
AATTCAGAGGATGTTGGGAG+TGG 0.546760 8.4:+8774083 MS.gene57565:CDS
GGAAGAAGTAGAGAACTTCA+AGG 0.547852 8.4:+8774513 MS.gene57565:intron
ATGGTGGAGAGGTTCAGTGT+TGG 0.549002 8.4:+8773432 MS.gene57565:CDS
AATTACCTGCTGTGGTTCCA+GGG 0.549523 8.4:+8774300 MS.gene57565:CDS
CTTTGGAAGCTGAGAGTGGT+GGG 0.555129 8.4:+8777272 MS.gene57565:CDS
TTGCTGCCCTAGTCTCAGCA+AGG 0.558727 8.4:-8776682 None:intergenic
GGAATATATTGTAATTTACA+GGG 0.559154 8.4:+8776502 MS.gene57565:CDS
GAGAAATATGGCGTTGAGGA+TGG 0.559402 8.4:+8773413 MS.gene57565:CDS
GAGTAAAACTGGAGGTATTG+TGG 0.560101 8.4:+8773953 MS.gene57565:intron
AAATATGGCGTTGAGGATGG+TGG 0.563812 8.4:+8773416 MS.gene57565:CDS
GTTGTCACGAAGACAGGCAT+TGG 0.566651 8.4:+8777393 MS.gene57565:CDS
GTGGACAATTCAGAGGATGT+TGG 0.567770 8.4:+8774077 MS.gene57565:CDS
ATATAATAATTATTTATCGT+GGG 0.568217 8.4:+8777329 MS.gene57565:CDS
TCTTTGGAAGCTGAGAGTGG+TGG 0.568769 8.4:+8777271 MS.gene57565:CDS
CTATACATCTAATGATAGGA+TGG 0.569547 8.4:+8774608 MS.gene57565:CDS
TGGAGTTGCTGGTATTACTC+AGG 0.570067 8.4:+8773452 MS.gene57565:CDS
CCGCGCTTCAAAGATTGGAC+AGG 0.571785 8.4:+8774248 MS.gene57565:CDS
TAGAAAACATGCATCTACAC+TGG 0.573476 8.4:+8777179 MS.gene57565:CDS
ATTCAGACTTCTTCCGTATG+GGG 0.575842 8.4:+8774334 MS.gene57565:CDS
AATCAGTTGGAAGGTCTGCT+GGG 0.575969 8.4:-8776966 None:intergenic
ACATTCCTCGATATAACACT+AGG 0.578174 8.4:-8773995 None:intergenic
TATCGCAATATGCTTAACTT+GGG 0.578620 8.4:-8777248 None:intergenic
TTCGTGTAAGATTCTACGCA+AGG 0.581312 8.4:-8774029 None:intergenic
TGATCAGCATCAACAGGTAA+GGG 0.585666 8.4:-8774278 None:intergenic
TGGTATTACTCAGGAATTGG+TGG 0.587892 8.4:+8773461 MS.gene57565:CDS
ATGTCTCCAAATCAGTTGGA+AGG 0.588053 8.4:-8776975 None:intergenic
ATCTGTAGACAAGGATACCA+AGG 0.589472 8.4:+8777303 MS.gene57565:CDS
ATTCAGAGGATGTTGGGAGT+GGG 0.593368 8.4:+8774084 MS.gene57565:CDS
TGGGTCTCATAACCTGTGGA+CGG 0.596006 8.4:-8777363 None:intergenic
CTAGAGCTATAGTAAAGCTG+TGG 0.601734 8.4:+8774541 MS.gene57565:CDS
TAGAGCTATAGTAAAGCTGT+GGG 0.602614 8.4:+8774542 MS.gene57565:CDS
ATTTCCTTGTTGGATAAACA+AGG 0.603660 8.4:-8774362 None:intergenic
AAGGTTCAGGAAGTCTGAGA+AGG 0.605613 8.4:+8776915 MS.gene57565:CDS
CCATACGGAAGAAGTCTGAA+TGG 0.606838 8.4:-8774332 None:intergenic
TAGGATGGCCGAAGAACTCA+AGG 0.607091 8.4:+8774623 MS.gene57565:CDS
GAATATATTGTAATTTACAG+GGG 0.614122 8.4:+8776503 MS.gene57565:CDS
GCAAGGGTTCCAGCAAGTAA+CGG 0.614542 8.4:-8776665 None:intergenic
TGGTTGATGTCCCCAATTGG+CGG 0.616228 8.4:-8776705 None:intergenic
ACACTGGAAATATCGCGAGT+TGG 0.619243 8.4:+8777195 MS.gene57565:CDS
AGGGCAGCAACCGCCAATTG+GGG 0.622870 8.4:+8776695 MS.gene57565:CDS
GACTGAGAAATATGGCGTTG+AGG 0.626272 8.4:+8773409 MS.gene57565:CDS
GACCCAACTCATCCAACAGA+AGG 0.627115 8.4:-8774226 None:intergenic
ATAAGTGTGAAAGAAATGGT+TGG 0.627154 8.4:+8774119 MS.gene57565:CDS
AAGAGCTCATCAAATTCTCG+AGG 0.628328 8.4:+8773560 MS.gene57565:CDS
TGCTGCCCTAGTCTCAGCAA+GGG 0.628919 8.4:-8776681 None:intergenic
AGGAAATGACTGACATGCGT+AGG 0.633226 8.4:+8774378 MS.gene57565:CDS
AACTGTTCTCCAACAAGACG+AGG 0.635550 8.4:+8776580 MS.gene57565:CDS
GAATGCTGTGGACAATTCAG+AGG 0.643088 8.4:+8774070 MS.gene57565:CDS
CATTCCTCGATATAACACTA+GGG 0.644587 8.4:-8773994 None:intergenic
GCGTAGGATTGCTAGAAGAA+CGG 0.645784 8.4:+8774394 MS.gene57565:CDS
GAAGAACTACTTCCGTCCAC+AGG 0.649230 8.4:+8777351 MS.gene57565:CDS
TAATGGTAAGGAGAATGCTG+TGG 0.650593 8.4:+8774058 MS.gene57565:CDS
TGCATACCAAGGGCAAAGTG+TGG 0.656479 8.4:-8774419 None:intergenic
TGGCGTTGAGGATGGTGGAG+AGG 0.659099 8.4:+8773421 MS.gene57565:CDS
TTTGGAAGCTGAGAGTGGTG+GGG 0.660912 8.4:+8777273 MS.gene57565:CDS
GAAACCTTGTTTATCCAACA+AGG 0.665865 8.4:+8774358 MS.gene57565:CDS
GGTGCTAGTATCTGTAGACA+AGG 0.666036 8.4:+8777294 MS.gene57565:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 8.4:+8776457 MS.gene57565:intron
CTTAATCAGAGTAAAACTGG+AGG 0.676737 8.4:+8773945 MS.gene57565:intron
TCTGTAGACAAGGATACCAA+GGG 0.682121 8.4:+8777304 MS.gene57565:CDS
TATTGAGCTTCAAAGACGAG+AGG 0.684121 8.4:+8777423 MS.gene57565:CDS
CCTGTCCAATCTTTGAAGCG+CGG 0.686187 8.4:-8774248 None:intergenic
AGTTCCCTAGTGTTATATCG+AGG 0.691104 8.4:+8773990 MS.gene57565:CDS
CATTTGCAGAAATTGACTGG+GGG 0.692019 8.4:+8776458 MS.gene57565:intron
ATATCTTTGGAAGCTGAGAG+TGG 0.692298 8.4:+8777268 MS.gene57565:CDS
AAGGATTTAGCTAAAATACA+GGG 0.697797 8.4:+8776934 MS.gene57565:CDS
AAACTGGAGGTATTGTGGTG+TGG 0.705901 8.4:+8773958 MS.gene57565:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAATTATTTATCGT+GGG + chr8.4:8777329-8777348 MS.gene57565:CDS 10.0%
!! ATCTAACTTTATAAATTATA+TGG + chr8.4:8776878-8776897 MS.gene57565:intron 10.0%
!! TTTATAAATTATATGGTTAT+AGG + chr8.4:8776885-8776904 MS.gene57565:intron 10.0%
!!! AATCAAACAAAATTTTTTAT+GGG - chr8.4:8776222-8776241 None:intergenic 10.0%
!!! TAATCAAACAAAATTTTTTA+TGG - chr8.4:8776223-8776242 None:intergenic 10.0%
!! AATAGATAATATACTATTAC+AGG + chr8.4:8775161-8775180 MS.gene57565:intron 15.0%
!! CACGATAAATAATTATTATA+TGG - chr8.4:8777330-8777349 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG + chr8.4:8777328-8777347 MS.gene57565:CDS 15.0%
!! TTTATAAAGTTAGATAGATA+TGG - chr8.4:8776873-8776892 None:intergenic 15.0%
!!! ACTGTTTAATTTAATTGTAT+TGG + chr8.4:8774681-8774700 MS.gene57565:intron 15.0%
!!! ACTTTCTAATTTTTTTTTTC+AGG + chr8.4:8777602-8777621 MS.gene57565:intron 15.0%
!!! TAAAGCAATAATTTCTTTTT+TGG + chr8.4:8777449-8777468 MS.gene57565:intron 15.0%
!!! TAACTTTTTTAATGAGTTTT+GGG + chr8.4:8776195-8776214 MS.gene57565:intron 15.0%
!!! TTATTAAATTTTTATGTCAG+TGG - chr8.4:8775429-8775448 None:intergenic 15.0%
!! AAAAAAGTTAGAACAATATG+AGG - chr8.4:8776185-8776204 None:intergenic 20.0%
!! AAAAGAAAACGATAATTTCA+AGG - chr8.4:8775903-8775922 None:intergenic 20.0%
!! AATGTGTTATACTTATGTTA+TGG - chr8.4:8775344-8775363 None:intergenic 20.0%
!! AGGAATATATTGTAATTTAC+AGG + chr8.4:8776501-8776520 MS.gene57565:CDS 20.0%
!! ATAAAAAGAGATAGAATCAT+GGG + chr8.4:8775642-8775661 MS.gene57565:intron 20.0%
!! GAATATATTGTAATTTACAG+GGG + chr8.4:8776503-8776522 MS.gene57565:CDS 20.0%
!! GGAATATATTGTAATTTACA+GGG + chr8.4:8776502-8776521 MS.gene57565:CDS 20.0%
!! TCATATGTATGATATAATGT+TGG - chr8.4:8775673-8775692 None:intergenic 20.0%
!! TTACTTATCTATATTCATCA+AGG + chr8.4:8773614-8773633 MS.gene57565:intron 20.0%
!!! AATAATTTCTTTTTTGGTAG+TGG + chr8.4:8777455-8777474 MS.gene57565:intron 20.0%
!!! AGTTTTTTGCAATTTAGAAA+GGG - chr8.4:8775957-8775976 None:intergenic 20.0%
!!! CAGTTATGTTGTTTAATTTT+AGG - chr8.4:8775288-8775307 None:intergenic 20.0%
!!! CTAACTTTTTTAATGAGTTT+TGG + chr8.4:8776194-8776213 MS.gene57565:intron 20.0%
!!! GATAGTTTTCAAATGATTTT+GGG - chr8.4:8775229-8775248 None:intergenic 20.0%
!!! GTAAAGAATAGTAAATCTTT+TGG - chr8.4:8774486-8774505 None:intergenic 20.0%
!!! TTTCTTTTGTAACATTATCA+GGG + chr8.4:8775915-8775934 MS.gene57565:intron 20.0%
!!! TTTTCTTTTGTAACATTATC+AGG + chr8.4:8775914-8775933 MS.gene57565:intron 20.0%
!!! TTTTTCTGTTGTAATAAACA+TGG - chr8.4:8775098-8775117 None:intergenic 20.0%
! AACACCATAAGTTTAAAGAA+AGG - chr8.4:8776427-8776446 None:intergenic 25.0%
! AACATTTATCAGAAATGAAG+TGG - chr8.4:8774995-8775014 None:intergenic 25.0%
! AAGGATTTAGCTAAAATACA+GGG + chr8.4:8776934-8776953 MS.gene57565:CDS 25.0%
! AAGTAAACTGATAATATGAG+AGG - chr8.4:8773600-8773619 None:intergenic 25.0%
! AATAATTATTATATGGCCCT+TGG - chr8.4:8777323-8777342 None:intergenic 25.0%
! AGTAAACTGATAATATGAGA+GGG - chr8.4:8773599-8773618 None:intergenic 25.0%
! ATCCTATCATTAGATGTATA+GGG - chr8.4:8774609-8774628 None:intergenic 25.0%
! ATGCTATTATGTTTATTCCT+TGG + chr8.4:8775553-8775572 MS.gene57565:intron 25.0%
! GATAAAAAGAGATAGAATCA+TGG + chr8.4:8775641-8775660 MS.gene57565:intron 25.0%
! GTATTAGTAGTTTGAAGAAA+AGG + chr8.4:8773334-8773353 MS.gene57565:CDS 25.0%
! GTTCAAATATTCTCTGATAA+AGG - chr8.4:8773889-8773908 None:intergenic 25.0%
! TAATAAAAAATTCCAAGCAC+AGG + chr8.4:8775443-8775462 MS.gene57565:intron 25.0%
! TCTAAATTGCAAAAAACTCT+TGG + chr8.4:8775959-8775978 MS.gene57565:intron 25.0%
! TCTACAGTTAAATCGTATTT+CGG - chr8.4:8775054-8775073 None:intergenic 25.0%
! TCTATGTGTAGAAAGAAATA+GGG + chr8.4:8775527-8775546 MS.gene57565:intron 25.0%
! TCTCGATTAAAAGATTCAAT+AGG - chr8.4:8774146-8774165 None:intergenic 25.0%
! TCTTGTAAATGAGAATATCA+GGG + chr8.4:8774803-8774822 MS.gene57565:intron 25.0%
! TGAAATAAGTGTGAAAGAAA+TGG + chr8.4:8774115-8774134 MS.gene57565:CDS 25.0%
! TGGTAAAAATACTTGTGAAA+GGG + chr8.4:8777215-8777234 MS.gene57565:CDS 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG + chr8.4:8776420-8776439 MS.gene57565:intron 25.0%
! TTCTATGTGTAGAAAGAAAT+AGG + chr8.4:8775526-8775545 MS.gene57565:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG + chr8.4:8774802-8774821 MS.gene57565:intron 25.0%
! TTGGTAAAAATACTTGTGAA+AGG + chr8.4:8777214-8777233 MS.gene57565:CDS 25.0%
!! AACCTTACTTTCTAGAAATA+AGG + chr8.4:8776481-8776500 MS.gene57565:CDS 25.0%
!! ATAAGCATGATATATTTTCC+TGG + chr8.4:8775489-8775508 MS.gene57565:intron 25.0%
!! GCATTAGACAAAAGTATAAT+GGG - chr8.4:8774848-8774867 None:intergenic 25.0%
!! GGAATTTTATCATGCTTAAA+AGG + chr8.4:8774702-8774721 MS.gene57565:intron 25.0%
!! GGATAGTTTTCAAATGATTT+TGG - chr8.4:8775230-8775249 None:intergenic 25.0%
!! TAAGCATGATATATTTTCCT+GGG + chr8.4:8775490-8775509 MS.gene57565:intron 25.0%
!! TAATATTGTCCAATTTCTAG+CGG - chr8.4:8774662-8774681 None:intergenic 25.0%
!! TCTTACACGAAAGTATATAA+TGG + chr8.4:8774041-8774060 MS.gene57565:CDS 25.0%
!! TGCATTAGACAAAAGTATAA+TGG - chr8.4:8774849-8774868 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG + chr8.4:8777707-8777726 MS.gene57565:intron 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG + chr8.4:8774961-8774980 MS.gene57565:intron 25.0%
!!! AATTAAGTTGATTGTCCAAA+TGG + chr8.4:8773817-8773836 MS.gene57565:intron 25.0%
!!! AGTTTTTTGTTGTTGATTTC+AGG + chr8.4:8777752-8777771 MS.gene57565:intron 25.0%
!!! ATTAAGTTGATTGTCCAAAT+GGG + chr8.4:8773818-8773837 MS.gene57565:intron 25.0%
!!! GAGTTTTTTGCAATTTAGAA+AGG - chr8.4:8775958-8775977 None:intergenic 25.0%
!!! GTTTTTTGCAATTTAGAAAG+GGG - chr8.4:8775956-8775975 None:intergenic 25.0%
!!! TCTTACAAGACTTTGAAATA+TGG - chr8.4:8776311-8776330 None:intergenic 25.0%
!!! TGTAGAAACTGTCTTTTTTA+TGG + chr8.4:8775068-8775087 MS.gene57565:intron 25.0%
!!! TTCCTTATTTCTAGAAAGTA+AGG - chr8.4:8776486-8776505 None:intergenic 25.0%
AACCAAGTAAACAAGAAGTT+GGG + chr8.4:8776723-8776742 MS.gene57565:CDS 30.0%
AAGGAGAAGTAATACTGAAT+TGG + chr8.4:8773353-8773372 MS.gene57565:CDS 30.0%
AATATTCTCTGATAAAGGAC+AGG - chr8.4:8773884-8773903 None:intergenic 30.0%
AATGATGAGAGAATCTACTT+TGG + chr8.4:8776748-8776767 MS.gene57565:CDS 30.0%
ACACCATATATCAGATTTAC+AGG + chr8.4:8777632-8777651 MS.gene57565:CDS 30.0%
AGAATATCGTTTATTTACCC+AGG - chr8.4:8775510-8775529 None:intergenic 30.0%
AGGAGGATATGAAAAATCAA+AGG + chr8.4:8777772-8777791 MS.gene57565:intron 30.0%
ATAAGTGTGAAAGAAATGGT+TGG + chr8.4:8774119-8774138 MS.gene57565:CDS 30.0%
ATATCGCAATATGCTTAACT+TGG - chr8.4:8777252-8777271 None:intergenic 30.0%
ATTTCCTTGTTGGATAAACA+AGG - chr8.4:8774365-8774384 None:intergenic 30.0%
CAATTGAAACATGAGCATAT+AGG + chr8.4:8774870-8774889 MS.gene57565:intron 30.0%
CATCCTATCATTAGATGTAT+AGG - chr8.4:8774610-8774629 None:intergenic 30.0%
CATGTAGAAAATCGCATTAT+AGG + chr8.4:8776048-8776067 MS.gene57565:intron 30.0%
CTATACATCTAATGATAGGA+TGG + chr8.4:8774608-8774627 MS.gene57565:CDS 30.0%
GAAGGATTTAGCTAAAATAC+AGG + chr8.4:8776933-8776952 MS.gene57565:CDS 30.0%
GACAATGCATAAAATATGCA+AGG - chr8.4:8777500-8777519 None:intergenic 30.0%
GGAATAAATAGAGCAATGAA+AGG - chr8.4:8775267-8775286 None:intergenic 30.0%
GGAGGATATGAAAAATCAAA+GGG + chr8.4:8777773-8777792 MS.gene57565:intron 30.0%
GTAATTGTGATCCAAAACAA+AGG - chr8.4:8775881-8775900 None:intergenic 30.0%
GTTTCTAACACAATGAGAAA+AGG - chr8.4:8775026-8775045 None:intergenic 30.0%
TAAGCATATTGCGATATCTT+TGG + chr8.4:8777255-8777274 MS.gene57565:CDS 30.0%
TATCGCAATATGCTTAACTT+GGG - chr8.4:8777251-8777270 None:intergenic 30.0%
TATGGTTATAGGCAAAAACA+AGG + chr8.4:8776896-8776915 MS.gene57565:intron 30.0%
TCTCCTGTAAATCTGATATA+TGG - chr8.4:8777638-8777657 None:intergenic 30.0%
TCTTGTTCATATTTATCCTG+TGG + chr8.4:8776377-8776396 MS.gene57565:intron 30.0%
TGCTATTCATGAAAAATGGA+TGG + chr8.4:8773485-8773504 MS.gene57565:CDS 30.0%
TGGATGCTATTCATGAAAAA+TGG + chr8.4:8773481-8773500 MS.gene57565:CDS 30.0%
TTATAGGTGGTCAATATTCA+CGG + chr8.4:8776064-8776083 MS.gene57565:intron 30.0%
TTCCCTATACATCTAATGAT+AGG + chr8.4:8774604-8774623 MS.gene57565:CDS 30.0%
TTCTTACCTAGAAGTAAGTA+TGG - chr8.4:8777051-8777070 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG + chr8.4:8773942-8773961 MS.gene57565:intron 30.0%
TTTCTCATTGTGTTAGAAAC+AGG + chr8.4:8775026-8775045 MS.gene57565:intron 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG + chr8.4:8777012-8777031 MS.gene57565:CDS 30.0%
! AGTTTTCAAATGATTTTGGG+AGG - chr8.4:8775226-8775245 None:intergenic 30.0%
! ATAATGCGATTTTCTACATG+TGG - chr8.4:8776048-8776067 None:intergenic 30.0%
! ATGAAGAGAGATCTTTGTTT+AGG + chr8.4:8777004-8777023 MS.gene57565:CDS 30.0%
! ATGTTAAGCATGAGATTTTC+AGG + chr8.4:8777130-8777149 MS.gene57565:intron 30.0%
! CACGAAAGTATATAATGGTA+AGG + chr8.4:8774046-8774065 MS.gene57565:CDS 30.0%
! CACGGTTTGATAATATTCAT+GGG + chr8.4:8776082-8776101 MS.gene57565:intron 30.0%
! CTTTTCATATTAGCAGAAAG+AGG - chr8.4:8773543-8773562 None:intergenic 30.0%
! TAATGCGATTTTCTACATGT+GGG - chr8.4:8776047-8776066 None:intergenic 30.0%
! TCACGGTTTGATAATATTCA+TGG + chr8.4:8776081-8776100 MS.gene57565:intron 30.0%
! TTTGTAGTATTCGTGCATTT+TGG + chr8.4:8776275-8776294 MS.gene57565:intron 30.0%
!! GTTTTCAAATGATTTTGGGA+GGG - chr8.4:8775225-8775244 None:intergenic 30.0%
!! TACAAGACTTTGAAATATGG+TGG - chr8.4:8776308-8776327 None:intergenic 30.0%
!!! ATTTCTTTTTTGGTAGTGGT+CGG + chr8.4:8777459-8777478 MS.gene57565:intron 30.0%
!!! CTGCTGTAATAATTTTGGTT+AGG + chr8.4:8777712-8777731 MS.gene57565:intron 30.0%
!!! TTTTTGTTGTTGATTTCAGG+AGG + chr8.4:8777755-8777774 MS.gene57565:intron 30.0%
AACATGAGCATATAGGTAGA+TGG + chr8.4:8774877-8774896 MS.gene57565:intron 35.0%
AATCAGATGACCTAAGTCAA+TGG + chr8.4:8775808-8775827 MS.gene57565:intron 35.0%
ACATTCCTCGATATAACACT+AGG - chr8.4:8773998-8774017 None:intergenic 35.0%
AGAATATCAGGGATGAGATT+AGG + chr8.4:8774814-8774833 MS.gene57565:intron 35.0%
ATGAAGCCATACTTACTTCT+AGG + chr8.4:8777042-8777061 MS.gene57565:CDS 35.0%
ATGACCTAAGTCAATGGAAT+AGG + chr8.4:8775814-8775833 MS.gene57565:intron 35.0%
ATGCATTTGCAGAAATTGAC+TGG + chr8.4:8776455-8776474 MS.gene57565:intron 35.0%
ATTCACTTCAATATTGCCAC+AGG - chr8.4:8776396-8776415 None:intergenic 35.0%
CAACCAAGTAAACAAGAAGT+TGG + chr8.4:8776722-8776741 MS.gene57565:CDS 35.0%
CACTTGACACTTAAATGCTT+TGG + chr8.4:8776347-8776366 MS.gene57565:intron 35.0%
CAGAATTCACACACAAACTA+AGG + chr8.4:8775137-8775156 MS.gene57565:intron 35.0%
CATAAAATATGCAAGGTCCA+GGG - chr8.4:8777493-8777512 None:intergenic 35.0%
CATTCCTCGATATAACACTA+GGG - chr8.4:8773997-8774016 None:intergenic 35.0%
CTTAATCAGAGTAAAACTGG+AGG + chr8.4:8773945-8773964 MS.gene57565:intron 35.0%
GAGAAATACCTTGAGTTCTT+CGG - chr8.4:8774634-8774653 None:intergenic 35.0%
GAGAAGTAATACTGAATTGG+CGG + chr8.4:8773356-8773375 MS.gene57565:CDS 35.0%
GGTAACAACAGATAGTCTTT+CGG - chr8.4:8776852-8776871 None:intergenic 35.0%
GTAAAGTGTATCTGACTATC+TGG + chr8.4:8774929-8774948 MS.gene57565:intron 35.0%
GTAGAAAATCGCATTATAGG+TGG + chr8.4:8776051-8776070 MS.gene57565:intron 35.0%
GTTAATGTCTCCAAATCAGT+TGG - chr8.4:8776982-8777001 None:intergenic 35.0%
TAGAAAACATGCATCTACAC+TGG + chr8.4:8777179-8777198 MS.gene57565:CDS 35.0%
TAGAGCTATAGTAAAGCTGT+GGG + chr8.4:8774542-8774561 MS.gene57565:CDS 35.0%
TATAAAACAACCCATCTGCT+TGG + chr8.4:8774727-8774746 MS.gene57565:intron 35.0%
TATAGGCAAAAACAAGGTTC+AGG + chr8.4:8776902-8776921 MS.gene57565:intron 35.0%
TCTCATAAACCGCTAGAAAT+TGG + chr8.4:8774650-8774669 MS.gene57565:intron 35.0%
TGAAAGGAGAAAGTGACTAT+AGG - chr8.4:8775251-8775270 None:intergenic 35.0%
TGATTTCACACCAATAAGCA+CGG - chr8.4:8776023-8776042 None:intergenic 35.0%
TGCATTTGCAGAAATTGACT+GGG + chr8.4:8776456-8776475 MS.gene57565:intron 35.0%
TTACTATTCTTTACTGCTGC+AGG + chr8.4:8774492-8774511 MS.gene57565:intron 35.0%
TTCAGGGAATTGCCATAATT+AGG + chr8.4:8775398-8775417 MS.gene57565:intron 35.0%
! AAGCGAGTTTAAAGCTTTCA+GGG + chr8.4:8775382-8775401 MS.gene57565:intron 35.0%
! ATAGCTGCAGTCAATCTTTT+GGG - chr8.4:8776252-8776271 None:intergenic 35.0%
! CTTTCGGAAGTTATTTCAGT+TGG - chr8.4:8776836-8776855 None:intergenic 35.0%
! GAAACCTTGTTTATCCAACA+AGG + chr8.4:8774358-8774377 MS.gene57565:CDS 35.0%
! GAGATCTTTGTTTAGGAAGA+TGG + chr8.4:8777011-8777030 MS.gene57565:CDS 35.0%
! GTGTAGATGCATGTTTTCTA+TGG - chr8.4:8777179-8777198 None:intergenic 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG - chr8.4:8776561-8776580 None:intergenic 35.0%
! TATAGCTGCAGTCAATCTTT+TGG - chr8.4:8776253-8776272 None:intergenic 35.0%
! TTCCCAACTTCTTGTTTACT+TGG - chr8.4:8776728-8776747 None:intergenic 35.0%
!! AAGTGATTTGCTGCAATTGA+AGG + chr8.4:8776130-8776149 MS.gene57565:intron 35.0%
!! AGTACCTATTCCATTGACTT+AGG - chr8.4:8775821-8775840 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG - chr8.4:8776562-8776581 None:intergenic 35.0%
!!! TAAGCATGAGATTTTCAGGT+AGG + chr8.4:8777134-8777153 MS.gene57565:intron 35.0%
!!! TTTCTTTTTTGGTAGTGGTC+GGG + chr8.4:8777460-8777479 MS.gene57565:intron 35.0%
AAACAAGGTTTCACCCCATA+CGG - chr8.4:8774350-8774369 None:intergenic 40.0%
AACCTTCTGTTGGATGAGTT+GGG + chr8.4:8774224-8774243 MS.gene57565:CDS 40.0%
AACTGATAACACCCACTTGA+GGG - chr8.4:8775716-8775735 None:intergenic 40.0%
AAGAGCTCATCAAATTCTCG+AGG + chr8.4:8773560-8773579 MS.gene57565:CDS 40.0%
ACCAAGACTCTCGAATTTCT+TGG - chr8.4:8775198-8775217 None:intergenic 40.0%
ACTTACCATACCGTGCTTAT+TGG + chr8.4:8776010-8776029 MS.gene57565:intron 40.0%
ACTTATGTTATGGCCGTTGT+GGG - chr8.4:8775334-8775353 None:intergenic 40.0%
AGTTCCCTAGTGTTATATCG+AGG + chr8.4:8773990-8774009 MS.gene57565:CDS 40.0%
ATCTGTAGACAAGGATACCA+AGG + chr8.4:8777303-8777322 MS.gene57565:CDS 40.0%
ATGTCTCCAAATCAGTTGGA+AGG - chr8.4:8776978-8776997 None:intergenic 40.0%
ATTCAGACTTCTTCCGTATG+GGG + chr8.4:8774334-8774353 MS.gene57565:CDS 40.0%
ATTGTGAGGTATGACCCATT+TGG - chr8.4:8773835-8773854 None:intergenic 40.0%
CAATTGCAGCAAATCACTTG+TGG - chr8.4:8776129-8776148 None:intergenic 40.0%
CATGAGTGAAGAAGAATCGA+TGG + chr8.4:8774187-8774206 MS.gene57565:CDS 40.0%
CATGTCAGTCATTTCCTTGT+TGG - chr8.4:8774375-8774394 None:intergenic 40.0%
CATTCAGACTTCTTCCGTAT+GGG + chr8.4:8774333-8774352 MS.gene57565:CDS 40.0%
CATTTGCAGAAATTGACTGG+GGG + chr8.4:8776458-8776477 MS.gene57565:intron 40.0%
CTAGAGCTATAGTAAAGCTG+TGG + chr8.4:8774541-8774560 MS.gene57565:CDS 40.0%
GCAAAAATAGCCATCAAACG+TGG + chr8.4:8774579-8774598 MS.gene57565:CDS 40.0%
GCATAAAATATGCAAGGTCC+AGG - chr8.4:8777494-8777513 None:intergenic 40.0%
GCATTTGCAGAAATTGACTG+GGG + chr8.4:8776457-8776476 MS.gene57565:intron 40.0%
GGAAGAAGTAGAGAACTTCA+AGG + chr8.4:8774513-8774532 MS.gene57565:intron 40.0%
GGTAATTGATCAGCATCAAC+AGG - chr8.4:8774287-8774306 None:intergenic 40.0%
GTTGCAGAGACTGAGAAATA+TGG + chr8.4:8773401-8773420 MS.gene57565:CDS 40.0%
TAAAATTTCACCTCGAGCCA+AGG - chr8.4:8775573-8775592 None:intergenic 40.0%
TAATGGTAAGGAGAATGCTG+TGG + chr8.4:8774058-8774077 MS.gene57565:CDS 40.0%
TACTTATGTTATGGCCGTTG+TGG - chr8.4:8775335-8775354 None:intergenic 40.0%
TATTGAGCTTCAAAGACGAG+AGG + chr8.4:8777423-8777442 MS.gene57565:CDS 40.0%
TCAGTGGCATAGCCTAATTA+TGG - chr8.4:8775413-8775432 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG + chr8.4:8775194-8775213 MS.gene57565:intron 40.0%
TCTGTAGACAAGGATACCAA+GGG + chr8.4:8777304-8777323 MS.gene57565:CDS 40.0%
TGATCAGCATCAACAGGTAA+GGG - chr8.4:8774281-8774300 None:intergenic 40.0%
TGCTGGTATTACTCAGGAAT+TGG + chr8.4:8773458-8773477 MS.gene57565:CDS 40.0%
TGGACAATTCAGAGGATGTT+GGG + chr8.4:8774078-8774097 MS.gene57565:CDS 40.0%
TGGTATTACTCAGGAATTGG+TGG + chr8.4:8773461-8773480 MS.gene57565:CDS 40.0%
TTCGTGTAAGATTCTACGCA+AGG - chr8.4:8774032-8774051 None:intergenic 40.0%
TTGAAGGATAAGCCTGAATG+TGG + chr8.4:8776146-8776165 MS.gene57565:intron 40.0%
TTGATCAGCATCAACAGGTA+AGG - chr8.4:8774282-8774301 None:intergenic 40.0%
TTGTTAACCTTCCCTCAAGT+GGG + chr8.4:8775702-8775721 MS.gene57565:intron 40.0%
TTTGTTAACCTTCCCTCAAG+TGG + chr8.4:8775701-8775720 MS.gene57565:intron 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG - chr8.4:8774759-8774778 None:intergenic 40.0%
! AGACTCTGCAGAGTATTTGA+AGG + chr8.4:8774163-8774182 MS.gene57565:CDS 40.0%
! AGCTTTATGCTTAGCTGCTT+TGG + chr8.4:8777086-8777105 MS.gene57565:intron 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG + chr8.4:8777268-8777287 MS.gene57565:CDS 40.0%
! CAAGCGAGTTTAAAGCTTTC+AGG + chr8.4:8775381-8775400 MS.gene57565:intron 40.0%
! CTGAATGGTGTTTTATACCC+TGG - chr8.4:8774320-8774339 None:intergenic 40.0%
! CTTCGTGACAACAAGCTTTT+GGG - chr8.4:8777385-8777404 None:intergenic 40.0%
! TATGTTTATTCCTTGGCTCG+AGG + chr8.4:8775560-8775579 MS.gene57565:intron 40.0%
! TCTTCGTGACAACAAGCTTT+TGG - chr8.4:8777386-8777405 None:intergenic 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG + chr8.4:8773953-8773972 MS.gene57565:intron 40.0%
!! TTGGCTCGAGGTGAAATTTT+AGG + chr8.4:8775572-8775591 MS.gene57565:intron 40.0%
!!! TTCTTTTTTGGTAGTGGTCG+GGG + chr8.4:8777461-8777480 MS.gene57565:intron 40.0%
AAATCAGTTGGAAGGTCTGC+TGG - chr8.4:8776970-8776989 None:intergenic 45.0%
AACTGTTCTCCAACAAGACG+AGG + chr8.4:8776580-8776599 MS.gene57565:CDS 45.0%
AAGGTTCAGGAAGTCTGAGA+AGG + chr8.4:8776915-8776934 MS.gene57565:CDS 45.0%
AATCAGTTGGAAGGTCTGCT+GGG - chr8.4:8776969-8776988 None:intergenic 45.0%
AATTACCTGCTGTGGTTCCA+GGG + chr8.4:8774300-8774319 MS.gene57565:CDS 45.0%
AATTCAGAGGATGTTGGGAG+TGG + chr8.4:8774083-8774102 MS.gene57565:CDS 45.0%
ACACTGGAAATATCGCGAGT+TGG + chr8.4:8777195-8777214 MS.gene57565:CDS 45.0%
AGAGAGCTTCTTGCATACCA+AGG - chr8.4:8774433-8774452 None:intergenic 45.0%
AGCACGGTATGGTAAGTTCA+AGG - chr8.4:8776007-8776026 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG + chr8.4:8776969-8776988 MS.gene57565:CDS 45.0%
AGGAAATGACTGACATGCGT+AGG + chr8.4:8774378-8774397 MS.gene57565:CDS 45.0%
AGTCTCTGCAACTCATGTTC+CGG - chr8.4:8773393-8773412 None:intergenic 45.0%
ATAGGGAACTCCACGTTTGA+TGG - chr8.4:8774592-8774611 None:intergenic 45.0%
ATTCAGAGGATGTTGGGAGT+GGG + chr8.4:8774084-8774103 MS.gene57565:CDS 45.0%
CAACCTTCTGTTGGATGAGT+TGG + chr8.4:8774223-8774242 MS.gene57565:CDS 45.0%
CAACTGATAACACCCACTTG+AGG - chr8.4:8775717-8775736 None:intergenic 45.0%
CAGAATGTGTGTGACTTTCG+TGG + chr8.4:8775849-8775868 MS.gene57565:intron 45.0%
CCATACGGAAGAAGTCTGAA+TGG - chr8.4:8774335-8774354 None:intergenic 45.0%
CCATTCAGACTTCTTCCGTA+TGG + chr8.4:8774332-8774351 MS.gene57565:CDS 45.0%
CTTTCTCTTCCTCGTCTTGT+TGG - chr8.4:8776592-8776611 None:intergenic 45.0%
GAATGCTGTGGACAATTCAG+AGG + chr8.4:8774070-8774089 MS.gene57565:CDS 45.0%
GACTGAGAAATATGGCGTTG+AGG + chr8.4:8773409-8773428 MS.gene57565:CDS 45.0%
GAGAGCTTCTTGCATACCAA+GGG - chr8.4:8774432-8774451 None:intergenic 45.0%
GATCGAACTCAACCTTCTGT+TGG + chr8.4:8774214-8774233 MS.gene57565:CDS 45.0%
GCGTAGGATTGCTAGAAGAA+CGG + chr8.4:8774394-8774413 MS.gene57565:CDS 45.0%
GTGGACAATTCAGAGGATGT+TGG + chr8.4:8774077-8774096 MS.gene57565:CDS 45.0%
TACCTAAAACCTGCCCACAA+CGG + chr8.4:8775318-8775337 MS.gene57565:intron 45.0%
TCACACCAATAAGCACGGTA+TGG - chr8.4:8776018-8776037 None:intergenic 45.0%
TCATACCTCACAATGCAGTG+TGG + chr8.4:8773841-8773860 MS.gene57565:intron 45.0%
TCTCAAATGCCGTTACTTGC+TGG + chr8.4:8776656-8776675 MS.gene57565:CDS 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG - chr8.4:8777522-8777541 None:intergenic 45.0%
TGCATGCAAGAACCACATTC+AGG - chr8.4:8776161-8776180 None:intergenic 45.0%
TGCTGATCAATTACCTGCTG+TGG + chr8.4:8774292-8774311 MS.gene57565:CDS 45.0%
TGGAGTTGCTGGTATTACTC+AGG + chr8.4:8773452-8773471 MS.gene57565:CDS 45.0%
TTCATGGGAGTGAGTTGCTA+TGG + chr8.4:8776097-8776116 MS.gene57565:intron 45.0%
! AAATATGGCGTTGAGGATGG+TGG + chr8.4:8773416-8773435 MS.gene57565:CDS 45.0%
! ACTTGGTTGATGTCCCCAAT+TGG - chr8.4:8776711-8776730 None:intergenic 45.0%
! ATTGGCGGAGAAGTTGATTC+CGG + chr8.4:8773371-8773390 MS.gene57565:CDS 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG - chr8.4:8774756-8774775 None:intergenic 45.0%
! GAGAAATATGGCGTTGAGGA+TGG + chr8.4:8773413-8773432 MS.gene57565:CDS 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG - chr8.4:8776555-8776574 None:intergenic 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG + chr8.4:8773958-8773977 MS.gene57565:CDS 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG + chr8.4:8777387-8777406 MS.gene57565:CDS 45.0%
!! CTTTTGGGTCTCATAACCTG+TGG - chr8.4:8777370-8777389 None:intergenic 45.0%
!!! CATGAGATTTTCAGGTAGGC+GGG + chr8.4:8777138-8777157 MS.gene57565:intron 45.0%
!!! GCATGAGATTTTCAGGTAGG+CGG + chr8.4:8777137-8777156 MS.gene57565:intron 45.0%
AGCAACCACACTGCATTGTG+AGG - chr8.4:8773849-8773868 None:intergenic 50.0%
CAATTACCTGCTGTGGTTCC+AGG + chr8.4:8774299-8774318 MS.gene57565:CDS 50.0%
GAAGAACTACTTCCGTCCAC+AGG + chr8.4:8777351-8777370 MS.gene57565:CDS 50.0%
GACCCAACTCATCCAACAGA+AGG - chr8.4:8774229-8774248 None:intergenic 50.0%
GATAACACCCACTTGAGGGA+AGG - chr8.4:8775712-8775731 None:intergenic 50.0%
GCAAGGGTTCCAGCAAGTAA+CGG - chr8.4:8776668-8776687 None:intergenic 50.0%
GCAGTCAACTTACCTGTGCT+TGG - chr8.4:8775458-8775477 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr8.4:8777523-8777542 None:intergenic 50.0%
GTTGTCACGAAGACAGGCAT+TGG + chr8.4:8777393-8777412 MS.gene57565:CDS 50.0%
TAGGATGGCCGAAGAACTCA+AGG + chr8.4:8774623-8774642 MS.gene57565:CDS 50.0%
TGCATACCAAGGGCAAAGTG+TGG - chr8.4:8774422-8774441 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG + chr8.4:8776676-8776695 MS.gene57565:CDS 50.0%
TGGGTCTCATAACCTGTGGA+CGG - chr8.4:8777366-8777385 None:intergenic 50.0%
TTATACCCTGGAACCACAGC+AGG - chr8.4:8774308-8774327 None:intergenic 50.0%
TTCTACGCAAGGCAGCTTGT+AGG - chr8.4:8774021-8774040 None:intergenic 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG + chr8.4:8777273-8777292 MS.gene57565:CDS 50.0%
! AGGTATTGTGGTGTGGCGAT+CGG + chr8.4:8773965-8773984 MS.gene57565:CDS 50.0%
! AGGTTCAGTGTTGGAGTTGC+TGG + chr8.4:8773441-8773460 MS.gene57565:CDS 50.0%
! ATGGTGGAGAGGTTCAGTGT+TGG + chr8.4:8773432-8773451 MS.gene57565:CDS 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG + chr8.4:8777272-8777291 MS.gene57565:CDS 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG + chr8.4:8777271-8777290 MS.gene57565:CDS 50.0%
! TGGTTGATGTCCCCAATTGG+CGG - chr8.4:8776708-8776727 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG - chr8.4:8774251-8774270 None:intergenic 50.0%
AAGGAGGTCGCCAAGCAGAT+GGG - chr8.4:8774740-8774759 None:intergenic 55.0%
ATGTTATGGCCGTTGTGGGC+AGG - chr8.4:8775330-8775349 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr8.4:8777524-8777543 MS.gene57565:intron 55.0%
CCGCGCTTCAAAGATTGGAC+AGG + chr8.4:8774248-8774267 MS.gene57565:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr8.4:8777527-8777546 None:intergenic 55.0%
CTGGAACCCTTGCTGAGACT+AGG + chr8.4:8776675-8776694 MS.gene57565:CDS 55.0%
GGTAGGCGGGATGTTTATGC+TGG + chr8.4:8777151-8777170 MS.gene57565:intron 55.0%
GGTATTGTGGTGTGGCGATC+GGG + chr8.4:8773966-8773985 MS.gene57565:CDS 55.0%
TAGGGCAGCAACCGCCAATT+GGG + chr8.4:8776694-8776713 MS.gene57565:CDS 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG - chr8.4:8776684-8776703 None:intergenic 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG + chr8.4:8774243-8774262 MS.gene57565:CDS 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG - chr8.4:8776685-8776704 None:intergenic 55.0%
!! AGGGTTTTGGTGACAGCAGG+AGG - chr8.4:8776542-8776561 None:intergenic 55.0%
!! CGTGGCGTCTGCCTTTGTTT+TGG + chr8.4:8775867-8775886 MS.gene57565:intron 55.0%
!! GTCAGGGTTTTGGTGACAGC+AGG - chr8.4:8776545-8776564 None:intergenic 55.0%
AGGGCAGCAACCGCCAATTG+GGG + chr8.4:8776695-8776714 MS.gene57565:CDS 60.0%
AGTGGTCGGGGTTTGAACCC+TGG + chr8.4:8777473-8777492 MS.gene57565:intron 60.0%
CAAGGAGGTCGCCAAGCAGA+TGG - chr8.4:8774741-8774760 None:intergenic 60.0%
CATCTGCTTGGCGACCTCCT+TGG + chr8.4:8774739-8774758 MS.gene57565:intron 60.0%
CTAGGGCAGCAACCGCCAAT+TGG + chr8.4:8776693-8776712 MS.gene57565:CDS 60.0%
! GGCCGTTGTGGGCAGGTTTT+AGG - chr8.4:8775323-8775342 None:intergenic 60.0%
!! TGGCGTTGAGGATGGTGGAG+AGG + chr8.4:8773421-8773440 MS.gene57565:CDS 60.0%
ACGGCGCCACACTTTGCCCT+TGG + chr8.4:8774413-8774432 MS.gene57565:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 8773303 8777804 8773303 ID=MS.gene57565
chr8.4 mRNA 8773303 8777804 8773303 ID=MS.gene57565.t1;Parent=MS.gene57565
chr8.4 exon 8773303 8773581 8773303 ID=MS.gene57565.t1.exon1;Parent=MS.gene57565.t1
chr8.4 CDS 8773303 8773581 8773303 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8773954 8774434 8773954 ID=MS.gene57565.t1.exon2;Parent=MS.gene57565.t1
chr8.4 CDS 8773954 8774434 8773954 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8774514 8774644 8774514 ID=MS.gene57565.t1.exon3;Parent=MS.gene57565.t1
chr8.4 CDS 8774514 8774644 8774514 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8776467 8776817 8776467 ID=MS.gene57565.t1.exon4;Parent=MS.gene57565.t1
chr8.4 CDS 8776467 8776817 8776467 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8776907 8777063 8776907 ID=MS.gene57565.t1.exon5;Parent=MS.gene57565.t1
chr8.4 CDS 8776907 8777063 8776907 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8777152 8777444 8777152 ID=MS.gene57565.t1.exon6;Parent=MS.gene57565.t1
chr8.4 CDS 8777152 8777444 8777152 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8777624 8777683 8777624 ID=MS.gene57565.t1.exon7;Parent=MS.gene57565.t1
chr8.4 CDS 8777624 8777683 8777624 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
chr8.4 exon 8777774 8777804 8777774 ID=MS.gene57565.t1.exon8;Parent=MS.gene57565.t1
chr8.4 CDS 8777774 8777804 8777774 ID=cds.MS.gene57565.t1;Parent=MS.gene57565.t1
Gene Sequence

>MS.gene57565

ATGGAAAGAGAGTTTGAAGAATCAGAAAGTAGTATTAGTAGTTTGAAGAAAAGGAGAAGTAATACTGAATTGGCGGAGAAGTTGATTCCGGAACATGAGTTGCAGAGACTGAGAAATATGGCGTTGAGGATGGTGGAGAGGTTCAGTGTTGGAGTTGCTGGTATTACTCAGGAATTGGTGGATGCTATTCATGAAAAATGGATGGTTGATGAAGTTGTTAAGTTTAAGTTTGATTCTCCTCTTTCTGCTAATATGAAAAGAGCTCATCAAATTCTCGAGGTTTAATGCTCATTCCCTCTCATATTATCAGTTTACTTATCTATATTCATCAAGGACTGTTTTGATTGACTTATTTGAGCTTATCTACTGAAATACACATGTCTGAAACTATTTGAAAGAGCTTATGAAAAACAACTTATGAATAATTGAATACAGTCTGAGTCTATTTTATCTTTGTTATAGAAACGACTTAGAGTAAGAACTTATATGACAATCACTTATGATATAGATGCTTAATTAAGTTGATTGTCCAAATGGGTCATACCTCACAATGCAGTGTGGTTGCTTGCTTATAATAACCTGTCCTTTATCAGAGAATATTTGAACTGCTAGAGCATTTATATTCATAGTATTATTTTCTTGCTTAATCAGAGTAAAACTGGAGGTATTGTGGTGTGGCGATCGGGAAGTTCCCTAGTGTTATATCGAGGAATGTCCTACAAGCTGCCTTGCGTAGAATCTTACACGAAAGTATATAATGGTAAGGAGAATGCTGTGGACAATTCAGAGGATGTTGGGAGTGGGAGAAGTGCTGAAATAAGTGTGAAAGAAATGGTTGGACCTATTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGACATGAGTGAAGAAGAATCGATGGAATTGATCGAACTCAACCTTCTGTTGGATGAGTTGGGTCCGCGCTTCAAAGATTGGACAGGACGTGAGCCCTTACCTGTTGATGCTGATCAATTACCTGCTGTGGTTCCAGGGTATAAAACACCATTCAGACTTCTTCCGTATGGGGTGAAACCTTGTTTATCCAACAAGGAAATGACTGACATGCGTAGGATTGCTAGAAGAACGGCGCCACACTTTGCCCTTGGTATGCAAGAAGCTCTCTAGTTATATTCATGTCTTCAAATTTCTCTTTCCAAAAGATTTACTATTCTTTACTGCTGCAGGAAGAAGTAGAGAACTTCAAGGTCTAGCTAGAGCTATAGTAAAGCTGTGGGAAACAAGCGCTATTGCAAAAATAGCCATCAAACGTGGAGTTCCCTATACATCTAATGATAGGATGGCCGAAGAACTCAAGGTATTTCTCATAAACCGCTAGAAATTGGACAATATTACTGTTTAATTTAATTGTATTGGAATTTTATCATGCTTAAAAGGTATATAAAACAACCCATCTGCTTGGCGACCTCCTTGGCTGTTGACTAAAAGAGTGTTGAGTTTACTGAGAGCTTCATTTCTTGTAAATGAGAATATCAGGGATGAGATTAGGATTTTAAACCCATTATACTTTTGTCTAATGCATCAATTGAAACATGAGCATATAGGTAGATGGATCAATAAAAATGAGACATGTCTAGTATCGTAAAGTGTATCTGACTATCTGGATTTTATTATTTTCATCTGAAAATAGCAAAGGTGAAACAACCACTTCATTTCTGATAAATGTTTATTTTATCCTTTTCTCATTGTGTTAGAAACAGGTACCGAAATACGATTTAACTGTAGAAACTGTCTTTTTTATGGCAGACCATGTTTATTACAACAGAAAAAGAATTACACATAGAGAATGCAGAATTCACACACAAACTAAGGAAATAGATAATATACTATTACAGGACAATTCTTATCCAAGAAATTCGAGAGTCTTGGTCTCTCCCTCCCAAAATCATTTGAAAACTATCCTATAGTCACTTTCTCCTTTCATTGCTCTATTTATTCCTAAAATTAAACAACATAACTGACATAATAACTACCTAAAACCTGCCCACAACGGCCATAACATAAGTATAACACATTGCTGTTTGCTCTAGTAACAAGCGAGTTTAAAGCTTTCAGGGAATTGCCATAATTAGGCTATGCCACTGACATAAAAATTTAATAAAAAATTCCAAGCACAGGTAAGTTGACTGCATAATTCATTAATAAGCATGATATATTTTCCTGGGTAAATAAACGATATTCTATGTGTAGAAAGAAATAGGGTGAATGCTATTATGTTTATTCCTTGGCTCGAGGTGAAATTTTAGGAAATAGAAAAAACATATTATGAAATAAAAAACAGAAAATCTTCACTGATAAAAAGAGATAGAATCATGGGATTTTCCAACATTATATCATACATATGACTAACAAGTTTGTTAACCTTCCCTCAAGTGGGTGTTATCAGTTGAAAGTACGAGATGAAATGCAAAAAAGCAGTATAAGTACTGCATGTCTGCTTTTTGTAGTTAATGCTAACTGAATCAGATGACCTAAGTCAATGGAATAGGTACTCTTAATAACAGAATGTGTGTGACTTTCGTGGCGTCTGCCTTTGTTTTGGATCACAATTACCTTGAAATTATCGTTTTCTTTTGTAACATTATCAGGGTTAAAGTGAAAACAGCCCCTTTCTAAATTGCAAAAAACTCTTGGTTCAGAAATCAGCAACTTGACTCCTTGAACTTACCATACCGTGCTTATTGGTGTGAAATCAACCCACATGTAGAAAATCGCATTATAGGTGGTCAATATTCACGGTTTGATAATATTCATGGGAGTGAGTTGCTATGGTTCAAACCACAAGTGATTTGCTGCAATTGAAGGATAAGCCTGAATGTGGTTCTTGCATGCAACCTCATATTGTTCTAACTTTTTTAATGAGTTTTGGGTCCCATAAAAAATTTTGTTTGATTAATAATACCCAAAAGATTGACTGCAGCTATACTTTTGTAGTATTCGTGCATTTTGGAAGCTAACCACCATATTTCAAAGTCTTGTAAGACTGTAAGAATTGTTAGCACTTGACACTTAAATGCTTTGGCAGTCGTTCTTGTTCATATTTATCCTGTGGCAATATTGAAGTGAATAAATTGTTCCTTTCTTTAAACTTATGGTGTTTGCATTTCATGCATTTGCAGAAATTGACTGGGGGAACCTTACTTTCTAGAAATAAGGAATATATTGTAATTTACAGGGGAAATGACTTCTTGCCTCCTGCTGTCACCAAAACCCTGACTGAGAGACAAAAACTAACTGTTCTCCAACAAGACGAGGAAGAGAAAGCACGTCAAAATGCTTCATCGATTACTTTATCAAATAGCAAATCATCTCAAATGCCGTTACTTGCTGGAACCCTTGCTGAGACTAGGGCAGCAACCGCCAATTGGGGACATCAACCAAGTAAACAAGAAGTTGGGAAAATGATGAGAGAATCTACTTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAGTAAACTAGCTCTAGTAAGTTACAAGAGACCAACTGAAATAACTTCCGAAAGACTATCTGTTGTTACCATATCTATCTAACTTTATAAATTATATGGTTATAGGCAAAAACAAGGTTCAGGAAGTCTGAGAAGGATTTAGCTAAAATACAGGGTGATTTTGACCCAGCAGACCTTCCAACTGATTTGGAGACATTAACTAATGAAGAGAGATCTTTGTTTAGGAAGATGGGTCTGAGTATGAAGCCATACTTACTTCTAGGTAAGAATGACAAATTTATTATAGCTTTATGCTTAGCTGCTTTGGTACAAATTTATTATACAAAAAATGTTAAGCATGAGATTTTCAGGTAGGCGGGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGCGAGTTGGTAAAAATACTTGTGAAAGGGAAAAATTTAGCCCAAGTTAAGCATATTGCGATATCTTTGGAAGCTGAGAGTGGTGGGGTGCTAGTATCTGTAGACAAGGATACCAAGGGCCATATAATAATTATTTATCGTGGGAAGAACTACTTCCGTCCACAGGTTATGAGACCCAAAAGCTTGTTGTCACGAAGACAGGCATTGGCTCGATCTATTGAGCTTCAAAGACGAGAGGTAATAAAGCAATAATTTCTTTTTTGGTAGTGGTCGGGGTTTGAACCCTGGACCTTGCATATTTTATGCATTGTCCCAACCAACTGAGCTAAGCTCACGAGGACAAAGCAATAATTTCTAATAAACTGAGATTCTTTATTGTTCTTGAATCTCATGAACTTTCTAATTTTTTTTTTCAGGCACTAAAACACCATATATCAGATTTACAGGAGATGATTGAGTTGCTCAAATCTGAGCTAGTATGACATTTTATCACTTCTAATTACTCTGCTGTAATAATTTTGGTTAGGTTATAAGTTCTATCATAAGTTTTTTGTTGTTGATTTCAGGAGGATATGAAAAATCAAAGGGTGATTGATG

Protein sequence

>MS.gene57565.t1

MEREFEESESSISSLKKRRSNTELAEKLIPEHELQRLRNMALRMVERFSVGVAGITQELVDAIHEKWMVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSLVLYRGMSYKLPCVESYTKVYNGKENAVDNSEDVGSGRSAEISVKEMVGPIESFNRDSAEYLKDMSEEESMELIELNLLLDELGPRFKDWTGREPLPVDADQLPAVVPGYKTPFRLLPYGVKPCLSNKEMTDMRRIARRTAPHFALGRSRELQGLARAIVKLWETSAIAKIAIKRGVPYTSNDRMAEELKKLTGGTLLSRNKEYIVIYRGNDFLPPAVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMPLLAGTLAETRAATANWGHQPSKQEVGKMMRESTLDRLSSLIRNHESKLALAKTRFRKSEKDLAKIQGDFDPADLPTDLETLTNEERSLFRKMGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKILVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGHIIIIYRGKNYFRPQVMRPKSLLSRRQALARSIELQRREALKHHISDLQEMIELLKSELEDMKNQRVID