Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07115.t1 | XP_003625904.1 | 99.3 | 148 | 1 | 0 | 1 | 148 | 146 | 293 | 4.40E-73 | 283.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07115.t1 | Q9LHH7 | 83.1 | 142 | 24 | 0 | 2 | 143 | 154 | 295 | 1.2e-60 | 233.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07115.t1 | B7FKU9 | 99.3 | 148 | 1 | 0 | 1 | 148 | 146 | 293 | 3.1e-73 | 283.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene07115 | 0.808944 | 2.42E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene07115 | 0.807101 | 5.96E-50 | -1.69E-46 |
| MS.gene049153 | MS.gene07115 | 0.807279 | 5.46E-50 | -1.69E-46 |
| MS.gene049195 | MS.gene07115 | 0.852566 | 4.24E-61 | -1.69E-46 |
| MS.gene049233 | MS.gene07115 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene049260 | MS.gene07115 | 0.840136 | 1.04E-57 | -1.69E-46 |
| MS.gene049297 | MS.gene07115 | 0.829845 | 4.10E-55 | -1.69E-46 |
| MS.gene04933 | MS.gene07115 | 0.864739 | 9.79E-65 | -1.69E-46 |
| MS.gene049346 | MS.gene07115 | 0.816842 | 4.49E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene07115 | 0.861257 | 1.16E-63 | -1.69E-46 |
| MS.gene049382 | MS.gene07115 | 0.801904 | 7.23E-49 | -1.69E-46 |
| MS.gene049599 | MS.gene07115 | -0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene049681 | MS.gene07115 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene07115 | 0.870853 | 1.07E-66 | -1.69E-46 |
| MS.gene04984 | MS.gene07115 | 0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene07115 | 0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene049915 | MS.gene07115 | 0.804861 | 1.76E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene07115 | 0.85821 | 9.63E-63 | -1.69E-46 |
| MS.gene050227 | MS.gene07115 | 0.868891 | 4.66E-66 | -1.69E-46 |
| MS.gene050228 | MS.gene07115 | 0.863006 | 3.39E-64 | -1.69E-46 |
| MS.gene050301 | MS.gene07115 | 0.803406 | 3.54E-49 | -1.69E-46 |
| MS.gene050319 | MS.gene07115 | -0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene050330 | MS.gene07115 | -0.848058 | 7.81E-60 | -1.69E-46 |
| MS.gene050438 | MS.gene07115 | 0.859742 | 3.35E-63 | -1.69E-46 |
| MS.gene050442 | MS.gene07115 | 0.864014 | 1.65E-64 | -1.69E-46 |
| MS.gene050516 | MS.gene07115 | 0.820307 | 7.35E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene07115 | 0.875332 | 3.35E-68 | -1.69E-46 |
| MS.gene050560 | MS.gene07115 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene050586 | MS.gene07115 | 0.811782 | 5.89E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene07115 | -0.858578 | 7.49E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene07115 | 0.844353 | 7.97E-59 | -1.69E-46 |
| MS.gene050680 | MS.gene07115 | 0.815927 | 7.19E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene07115 | 0.852258 | 5.19E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene07115 | 0.853918 | 1.74E-61 | -1.69E-46 |
| MS.gene050724 | MS.gene07115 | 0.848442 | 6.11E-60 | -1.69E-46 |
| MS.gene050750 | MS.gene07115 | 0.833302 | 5.77E-56 | -1.69E-46 |
| MS.gene050762 | MS.gene07115 | 0.843872 | 1.07E-58 | -1.69E-46 |
| MS.gene050763 | MS.gene07115 | 0.846519 | 2.06E-59 | -1.69E-46 |
| MS.gene050780 | MS.gene07115 | 0.82361 | 1.26E-53 | -1.69E-46 |
| MS.gene050787 | MS.gene07115 | 0.879028 | 1.74E-69 | -1.69E-46 |
| MS.gene050807 | MS.gene07115 | 0.832586 | 8.69E-56 | -1.69E-46 |
| MS.gene050808 | MS.gene07115 | 0.814961 | 1.18E-51 | -1.69E-46 |
| MS.gene050815 | MS.gene07115 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene07115 | 0.851912 | 6.51E-61 | -1.69E-46 |
| MS.gene050826 | MS.gene07115 | 0.815294 | 9.95E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene07115 | 0.823589 | 1.28E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene07115 | 0.825332 | 4.97E-54 | -1.69E-46 |
| MS.gene051088 | MS.gene07115 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene07115 | -0.859181 | 4.94E-63 | -1.69E-46 |
| MS.gene051257 | MS.gene07115 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene051265 | MS.gene07115 | 0.846827 | 1.70E-59 | -1.69E-46 |
| MS.gene051344 | MS.gene07115 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene051626 | MS.gene07115 | 0.80538 | 1.37E-49 | -1.69E-46 |
| MS.gene051662 | MS.gene07115 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene07115 | 0.837452 | 5.16E-57 | -1.69E-46 |
| MS.gene051789 | MS.gene07115 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene07115 | 0.871998 | 4.46E-67 | -1.69E-46 |
| MS.gene051983 | MS.gene07115 | 0.85023 | 1.94E-60 | -1.69E-46 |
| MS.gene052077 | MS.gene07115 | 0.82909 | 6.25E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene07115 | 0.879756 | 9.61E-70 | -1.69E-46 |
| MS.gene052207 | MS.gene07115 | 0.842859 | 2.00E-58 | -1.69E-46 |
| MS.gene052255 | MS.gene07115 | 0.820927 | 5.30E-53 | -1.69E-46 |
| MS.gene052302 | MS.gene07115 | 0.840719 | 7.34E-58 | -1.69E-46 |
| MS.gene052309 | MS.gene07115 | -0.836628 | 8.37E-57 | -1.69E-46 |
| MS.gene052358 | MS.gene07115 | -0.831267 | 1.84E-55 | -1.69E-46 |
| MS.gene052376 | MS.gene07115 | 0.857455 | 1.61E-62 | -1.69E-46 |
| MS.gene052389 | MS.gene07115 | 0.825391 | 4.81E-54 | -1.69E-46 |
| MS.gene052613 | MS.gene07115 | 0.820556 | 6.44E-53 | -1.69E-46 |
| MS.gene052665 | MS.gene07115 | 0.815396 | 9.45E-52 | -1.69E-46 |
| MS.gene052856 | MS.gene07115 | 0.81046 | 1.14E-50 | -1.69E-46 |
| MS.gene052860 | MS.gene07115 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene07115 | 0.811873 | 5.63E-51 | -1.69E-46 |
| MS.gene053054 | MS.gene07115 | -0.815649 | 8.30E-52 | -1.69E-46 |
| MS.gene053074 | MS.gene07115 | 0.826485 | 2.64E-54 | -1.69E-46 |
| MS.gene053166 | MS.gene07115 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene053184 | MS.gene07115 | 0.842197 | 3.00E-58 | -1.69E-46 |
| MS.gene053216 | MS.gene07115 | 0.813783 | 2.15E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene07115 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene053630 | MS.gene07115 | 0.84482 | 5.97E-59 | -1.69E-46 |
| MS.gene053811 | MS.gene07115 | 0.856363 | 3.38E-62 | -1.69E-46 |
| MS.gene053836 | MS.gene07115 | 0.897354 | 1.53E-76 | -1.69E-46 |
| MS.gene054183 | MS.gene07115 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene07115 | 0.822761 | 1.99E-53 | -1.69E-46 |
| MS.gene054185 | MS.gene07115 | 0.825521 | 4.48E-54 | -1.69E-46 |
| MS.gene054379 | MS.gene07115 | 0.847078 | 1.45E-59 | -1.69E-46 |
| MS.gene054405 | MS.gene07115 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene054433 | MS.gene07115 | 0.840633 | 7.73E-58 | -1.69E-46 |
| MS.gene054467 | MS.gene07115 | 0.829605 | 4.69E-55 | -1.69E-46 |
| MS.gene054468 | MS.gene07115 | 0.846545 | 2.03E-59 | -1.69E-46 |
| MS.gene054472 | MS.gene07115 | 0.824438 | 8.07E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene07115 | 0.860883 | 1.51E-63 | -1.69E-46 |
| MS.gene054542 | MS.gene07115 | 0.857864 | 1.22E-62 | -1.69E-46 |
| MS.gene054559 | MS.gene07115 | 0.80256 | 5.29E-49 | -1.69E-46 |
| MS.gene054596 | MS.gene07115 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene054667 | MS.gene07115 | 0.822758 | 2.00E-53 | -1.69E-46 |
| MS.gene05468 | MS.gene07115 | 0.826829 | 2.19E-54 | -1.69E-46 |
| MS.gene054930 | MS.gene07115 | 0.887491 | 1.36E-72 | -1.69E-46 |
| MS.gene054942 | MS.gene07115 | 0.84847 | 6.01E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene07115 | 0.846895 | 1.63E-59 | -1.69E-46 |
| MS.gene05510 | MS.gene07115 | 0.807044 | 6.13E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene07115 | 0.810557 | 1.09E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene07115 | 0.849352 | 3.42E-60 | -1.69E-46 |
| MS.gene055357 | MS.gene07115 | 0.8115 | 6.79E-51 | -1.69E-46 |
| MS.gene055358 | MS.gene07115 | 0.869987 | 2.05E-66 | -1.69E-46 |
| MS.gene055422 | MS.gene07115 | 0.819899 | 9.12E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene07115 | 0.827822 | 1.27E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene07115 | 0.835159 | 1.97E-56 | -1.69E-46 |
| MS.gene055608 | MS.gene07115 | 0.817188 | 3.75E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene07115 | 0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene07115 | 0.802019 | 6.84E-49 | -1.69E-46 |
| MS.gene055816 | MS.gene07115 | -0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene07115 | 0.801072 | 1.07E-48 | -1.69E-46 |
| MS.gene05604 | MS.gene07115 | 0.801281 | 9.69E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene07115 | -0.876693 | 1.14E-68 | -1.69E-46 |
| MS.gene056087 | MS.gene07115 | 0.809602 | 1.75E-50 | -1.69E-46 |
| MS.gene056447 | MS.gene07115 | 0.823115 | 1.65E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene07115 | 0.804827 | 1.79E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene07115 | 0.807415 | 5.11E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene07115 | 0.815004 | 1.15E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene07115 | 0.83788 | 4.00E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene07115 | 0.843343 | 1.49E-58 | -1.69E-46 |
| MS.gene057026 | MS.gene07115 | 0.807718 | 4.41E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene07115 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene07115 | 0.842157 | 3.07E-58 | -1.69E-46 |
| MS.gene057200 | MS.gene07115 | 0.812345 | 4.44E-51 | -1.69E-46 |
| MS.gene057245 | MS.gene07115 | 0.815522 | 8.85E-52 | -1.69E-46 |
| MS.gene057260 | MS.gene07115 | 0.841939 | 3.50E-58 | -1.69E-46 |
| MS.gene057395 | MS.gene07115 | 0.824037 | 1.00E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene07115 | 0.845425 | 4.09E-59 | -1.69E-46 |
| MS.gene057469 | MS.gene07115 | 0.857572 | 1.49E-62 | -1.69E-46 |
| MS.gene05761 | MS.gene07115 | 0.823122 | 1.64E-53 | -1.69E-46 |
| MS.gene057639 | MS.gene07115 | 0.800288 | 1.55E-48 | -1.69E-46 |
| MS.gene057750 | MS.gene07115 | 0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene057967 | MS.gene07115 | 0.848156 | 7.33E-60 | -1.69E-46 |
| MS.gene058002 | MS.gene07115 | 0.824573 | 7.50E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene07115 | 0.82803 | 1.13E-54 | -1.69E-46 |
| MS.gene058139 | MS.gene07115 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene07115 | 0.807387 | 5.18E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene07115 | 0.841715 | 4.02E-58 | -1.69E-46 |
| MS.gene058182 | MS.gene07115 | 0.819671 | 1.03E-52 | -1.69E-46 |
| MS.gene058200 | MS.gene07115 | 0.805772 | 1.14E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene07115 | 0.806867 | 6.68E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene07115 | 0.848131 | 7.45E-60 | -1.69E-46 |
| MS.gene058749 | MS.gene07115 | 0.845714 | 3.42E-59 | -1.69E-46 |
| MS.gene058792 | MS.gene07115 | 0.832242 | 1.06E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene07115 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene07115 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene059033 | MS.gene07115 | -0.822787 | 1.97E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene07115 | 0.813645 | 2.30E-51 | -1.69E-46 |
| MS.gene059124 | MS.gene07115 | 0.826574 | 2.52E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene07115 | 0.837918 | 3.91E-57 | -1.69E-46 |
| MS.gene059249 | MS.gene07115 | 0.82006 | 8.37E-53 | -1.69E-46 |
| MS.gene059285 | MS.gene07115 | 0.803313 | 3.70E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene07115 | 0.806302 | 8.79E-50 | -1.69E-46 |
| MS.gene059569 | MS.gene07115 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene07115 | 0.811918 | 5.51E-51 | -1.69E-46 |
| MS.gene059664 | MS.gene07115 | 0.838227 | 3.26E-57 | -1.69E-46 |
| MS.gene059789 | MS.gene07115 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene07115 | 0.849846 | 2.49E-60 | -1.69E-46 |
| MS.gene059894 | MS.gene07115 | 0.801823 | 7.51E-49 | -1.69E-46 |
| MS.gene059899 | MS.gene07115 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene060084 | MS.gene07115 | 0.80114 | 1.04E-48 | -1.69E-46 |
| MS.gene060137 | MS.gene07115 | -0.842097 | 3.18E-58 | -1.69E-46 |
| MS.gene060165 | MS.gene07115 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene060314 | MS.gene07115 | 0.808309 | 3.30E-50 | -1.69E-46 |
| MS.gene060322 | MS.gene07115 | 0.846797 | 1.73E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene07115 | 0.811528 | 6.69E-51 | -1.69E-46 |
| MS.gene060404 | MS.gene07115 | 0.835217 | 1.91E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene07115 | 0.838338 | 3.05E-57 | -1.69E-46 |
| MS.gene060480 | MS.gene07115 | 0.824128 | 9.55E-54 | -1.69E-46 |
| MS.gene060572 | MS.gene07115 | 0.815254 | 1.02E-51 | -1.69E-46 |
| MS.gene060619 | MS.gene07115 | 0.808974 | 2.38E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene07115 | 0.827295 | 1.69E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene07115 | 0.82537 | 4.87E-54 | -1.69E-46 |
| MS.gene060802 | MS.gene07115 | 0.828605 | 8.19E-55 | -1.69E-46 |
| MS.gene060803 | MS.gene07115 | 0.864887 | 8.80E-65 | -1.69E-46 |
| MS.gene060942 | MS.gene07115 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene060994 | MS.gene07115 | 0.830881 | 2.29E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene07115 | 0.833768 | 4.41E-56 | -1.69E-46 |
| MS.gene061000 | MS.gene07115 | 0.829177 | 5.96E-55 | -1.69E-46 |
| MS.gene061002 | MS.gene07115 | 0.802074 | 6.67E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene07115 | -0.856607 | 2.87E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene07115 | 0.845469 | 3.98E-59 | -1.69E-46 |
| MS.gene061114 | MS.gene07115 | -0.856078 | 4.10E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07115.t1 | MTR_7g108580 | 99.324 | 148 | 1 | 0 | 1 | 148 | 146 | 293 | 5.17e-102 | 294 |
| MS.gene07115.t1 | MTR_7g076680 | 71.831 | 142 | 40 | 0 | 2 | 143 | 201 | 342 | 4.41e-70 | 214 |
| MS.gene07115.t1 | MTR_7g076680 | 71.831 | 142 | 40 | 0 | 2 | 143 | 222 | 363 | 5.19e-70 | 215 |
| MS.gene07115.t1 | MTR_7g076680 | 71.831 | 142 | 40 | 0 | 2 | 143 | 205 | 346 | 5.33e-70 | 214 |
| MS.gene07115.t1 | MTR_1g030450 | 67.832 | 143 | 46 | 0 | 1 | 143 | 214 | 356 | 1.02e-60 | 191 |
| MS.gene07115.t1 | MTR_3g007490 | 54.483 | 145 | 65 | 1 | 1 | 145 | 217 | 360 | 2.91e-50 | 164 |
| MS.gene07115.t1 | MTR_3g007580 | 41.935 | 93 | 47 | 2 | 1 | 92 | 32 | 118 | 3.20e-18 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07115.t1 | AT3G12290 | 83.099 | 142 | 24 | 0 | 2 | 143 | 154 | 295 | 3.21e-81 | 241 |
| MS.gene07115.t1 | AT4G00620 | 68.310 | 142 | 45 | 0 | 2 | 143 | 214 | 355 | 5.95e-67 | 207 |
| MS.gene07115.t1 | AT2G38660 | 66.901 | 142 | 47 | 0 | 2 | 143 | 208 | 349 | 8.57e-61 | 191 |
| MS.gene07115.t1 | AT2G38660 | 66.901 | 142 | 47 | 0 | 2 | 143 | 208 | 349 | 8.57e-61 | 191 |
| MS.gene07115.t1 | AT4G00600 | 62.676 | 142 | 53 | 0 | 2 | 143 | 164 | 305 | 2.56e-60 | 189 |
| MS.gene07115.t1 | AT2G38660 | 63.636 | 110 | 40 | 0 | 2 | 111 | 208 | 317 | 1.62e-42 | 144 |
Find 0 sgRNAs with CRISPR-Local
Find 64 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATATTATATTTTCAT+AGG | - | 51683:23452-23471 | MS.gene07115:intron | 10.0% |
| !!! | TTTTTAAAAAAACATAGACT+TGG | + | 51683:23330-23349 | None:intergenic | 15.0% |
| !!! | TTTTTGTCAATTTTCAAATT+TGG | - | 51683:23370-23389 | MS.gene07115:intron | 15.0% |
| !!! | AAATAGTTTTTAAATGGTAG+CGG | - | 51683:23425-23444 | MS.gene07115:intron | 20.0% |
| !!! | AATTTTCTAAAACTGTGTTT+TGG | + | 51683:23686-23705 | None:intergenic | 20.0% |
| !!! | ACGCATAAATAGTTTTTAAA+TGG | - | 51683:23419-23438 | MS.gene07115:intron | 20.0% |
| !!! | ATTTACTTTTTCTTAGATCA+AGG | - | 51683:23777-23796 | MS.gene07115:intron | 20.0% |
| !!! | TTTACTTTTTCTTAGATCAA+GGG | - | 51683:23778-23797 | MS.gene07115:intron | 20.0% |
| ! | AAATGAACGATATATAAGAG+TGG | - | 51683:23519-23538 | MS.gene07115:intron | 25.0% |
| ! | TTAGCTCAATATAATTGATG+TGG | + | 51683:23501-23520 | None:intergenic | 25.0% |
| ! | TTGAGAAGATTAATAACAGT+AGG | + | 51683:23744-23763 | None:intergenic | 25.0% |
| !! | TGTCAATTTTCAAATTTGGA+TGG | - | 51683:23374-23393 | MS.gene07115:intron | 25.0% |
| AAATTTGGATGGTTCTTTCT+TGG | - | 51683:23385-23404 | MS.gene07115:intron | 30.0% | |
| AATATCATTGAGAGCAACAA+CGG | + | 51683:23621-23640 | None:intergenic | 30.0% | |
| AATGTTGCTGAAGAATACTT+TGG | - | 51683:23972-23991 | MS.gene07115:CDS | 30.0% | |
| ACAAAAACTGCACATATACT+AGG | + | 51683:23357-23376 | None:intergenic | 30.0% | |
| CAATATAATTGATGTGGAAC+TGG | + | 51683:23495-23514 | None:intergenic | 30.0% | |
| GATATTCCTATAAACGACAT+TGG | - | 51683:23635-23654 | MS.gene07115:intron | 30.0% | |
| TGTAAGTATAAAGGGGAAAA+GGG | - | 51683:23102-23121 | MS.gene07115:CDS | 30.0% | |
| TTCAAAAGCAGTAATGAAAC+TGG | + | 51683:23163-23182 | None:intergenic | 30.0% | |
| ! | CATATACCAATGTCGTTTAT+AGG | + | 51683:23644-23663 | None:intergenic | 30.0% |
| ! | TAACAGTAGGCTATATTTTC+TGG | + | 51683:23731-23750 | None:intergenic | 30.0% |
| !! | ACTCATGTTTTAAACTTGAG+TGG | - | 51683:23552-23571 | MS.gene07115:intron | 30.0% |
| ACGAAGTGGTGTAAGTATAA+AGG | - | 51683:23093-23112 | MS.gene07115:CDS | 35.0% | |
| ATAAAGATTGTCAAGAGAGC+TGG | + | 51683:23591-23610 | None:intergenic | 35.0% | |
| CGAAGTGGTGTAAGTATAAA+GGG | - | 51683:23094-23113 | MS.gene07115:CDS | 35.0% | |
| GAAGTGGTGTAAGTATAAAG+GGG | - | 51683:23095-23114 | MS.gene07115:CDS | 35.0% | |
| GTGTAAGTATAAAGGGGAAA+AGG | - | 51683:23101-23120 | MS.gene07115:CDS | 35.0% | |
| TAAACTTGAGTGGAGATATG+CGG | - | 51683:23562-23581 | MS.gene07115:intron | 35.0% | |
| TTTCTTAGATCAAGGGAAGT+TGG | - | 51683:23785-23804 | MS.gene07115:intron | 35.0% | |
| ! | TGTTGGAGATGTAGATTTTG+AGG | - | 51683:23885-23904 | MS.gene07115:CDS | 35.0% |
| !!! | GCTATATTTTCTGGAGTATG+AGG | + | 51683:23722-23741 | None:intergenic | 35.0% |
| AAGGGAAGTTGGATAAAACC+TGG | - | 51683:23796-23815 | MS.gene07115:intron | 40.0% | |
| ACTTGTGTGTGAATGAGCAA+TGG | + | 51683:23203-23222 | None:intergenic | 40.0% | |
| AGCAACATTGTGACTGTCAT+TGG | + | 51683:23961-23980 | None:intergenic | 40.0% | |
| CATAGGAACCTAAGTGTTTG+TGG | - | 51683:23469-23488 | MS.gene07115:intron | 40.0% | |
| CTTGAACTATTGTCACGAAG+TGG | - | 51683:23079-23098 | MS.gene07115:CDS | 40.0% | |
| GCTTCACGTATGATATCTTC+TGG | + | 51683:23229-23248 | None:intergenic | 40.0% | |
| TAGACTTGGAATAGACATGC+AGG | + | 51683:23316-23335 | None:intergenic | 40.0% | |
| TATAACCTGCCTTCCTAGTT+GGG | + | 51683:23861-23880 | None:intergenic | 40.0% | |
| TTGGTAGAAGCAACATAGTC+GGG | - | 51683:23134-23153 | MS.gene07115:CDS | 40.0% | |
| ! | AAGCATCTAAAGTTGCTGGT+TGG | - | 51683:23908-23927 | MS.gene07115:CDS | 40.0% |
| ! | GATATTGTTATTGCAGCAGC+AGG | - | 51683:23250-23269 | MS.gene07115:CDS | 40.0% |
| ! | GTTGGTAGAAGCAACATAGT+CGG | - | 51683:23133-23152 | MS.gene07115:CDS | 40.0% |
| !! | ATTCTGTTGATGACCCAACT+AGG | - | 51683:23845-23864 | MS.gene07115:CDS | 40.0% |
| !! | GCTTTTGAAAGCAGATGCTA+CGG | - | 51683:23174-23193 | MS.gene07115:CDS | 40.0% |
| AAGGCAGGTTATAGGCTTGT+TGG | - | 51683:23868-23887 | MS.gene07115:CDS | 45.0% | |
| ACATCTATTACTGCAGCTCC+AGG | + | 51683:23817-23836 | None:intergenic | 45.0% | |
| CAACTAGGAAGGCAGGTTAT+AGG | - | 51683:23860-23879 | MS.gene07115:CDS | 45.0% | |
| CTATAACCTGCCTTCCTAGT+TGG | + | 51683:23862-23881 | None:intergenic | 45.0% | |
| GGAGCTGCAGTAATAGATGT+TGG | - | 51683:23817-23836 | MS.gene07115:CDS | 45.0% | |
| !! | GAGGAAGCATCTAAAGTTGC+TGG | - | 51683:23904-23923 | MS.gene07115:CDS | 45.0% |
| !! | TGTTGATGACCCAACTAGGA+AGG | - | 51683:23849-23868 | MS.gene07115:CDS | 45.0% |
| AAAGGGGAAAAGGGCAGTTG+TGG | - | 51683:23111-23130 | MS.gene07115:CDS | 50.0% | |
| GGAACTGGCCACAAACACTT+AGG | + | 51683:23480-23499 | None:intergenic | 50.0% | |
| GGTTGGATTACTCCTGTTCC+TGG | - | 51683:23925-23944 | MS.gene07115:CDS | 50.0% | |
| TGGATTACTCCTGTTCCTGG+AGG | - | 51683:23928-23947 | MS.gene07115:CDS | 50.0% | |
| TGTTATTGCAGCAGCAGGAC+AGG | - | 51683:23255-23274 | MS.gene07115:CDS | 50.0% | |
| AGCAGCAGGACAGGCAAAGA+TGG | - | 51683:23264-23283 | MS.gene07115:CDS | 55.0% | |
| GATGACCCAACTAGGAAGGC+AGG | - | 51683:23853-23872 | MS.gene07115:CDS | 55.0% | |
| GGGAAAAGGGCAGTTGTGGT+TGG | - | 51683:23115-23134 | MS.gene07115:CDS | 55.0% | |
| GTCATTGGACCTACACCTCC+AGG | + | 51683:23946-23965 | None:intergenic | 55.0% | |
| ! | ACTCCTGTTCCTGGAGGTGT+AGG | - | 51683:23934-23953 | MS.gene07115:CDS | 55.0% |
| GGACCTACACCTCCAGGAAC+AGG | + | 51683:23940-23959 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51683 | gene | 23073 | 24029 | 23073 | ID=MS.gene07115 |
| 51683 | mRNA | 23073 | 24029 | 23073 | ID=MS.gene07115.t1;Parent=MS.gene07115 |
| 51683 | exon | 23817 | 24029 | 23817 | ID=MS.gene07115.t1.exon1;Parent=MS.gene07115.t1 |
| 51683 | CDS | 23817 | 24029 | 23817 | ID=cds.MS.gene07115.t1;Parent=MS.gene07115.t1 |
| 51683 | exon | 23073 | 23309 | 23073 | ID=MS.gene07115.t1.exon2;Parent=MS.gene07115.t1 |
| 51683 | CDS | 23073 | 23309 | 23073 | ID=cds.MS.gene07115.t1;Parent=MS.gene07115.t1 |
| Gene Sequence |
| Protein sequence |
