AlfalfaGEDB | MS.gene072624

M. sativa cultivar XinJiangDaYe / MS.gene072624

KEGG: K03768
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072624.t1	XP_003626095.2	95.3	257	11	1	2	258	6	261	8.20E-136	493

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072624.t1	Q41651	68.6	258	70	4	2	258	1	248	1.4e-91	337.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072624.t1	G7KVH0	95.3	257	11	1	2	258	6	261	5.9e-136	493.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049230	MS.gene072624	0.804716	1.89E-49	-1.69E-46
MS.gene049378	MS.gene072624	0.858795	6.45E-63	-1.69E-46
MS.gene049501	MS.gene072624	0.806587	7.65E-50	-1.69E-46
MS.gene049756	MS.gene072624	0.808732	2.68E-50	-1.69E-46
MS.gene04984	MS.gene072624	0.854258	1.39E-61	-1.69E-46
MS.gene050226	MS.gene072624	0.842826	2.04E-58	-1.69E-46
MS.gene050227	MS.gene072624	0.86629	3.18E-65	-1.69E-46
MS.gene050228	MS.gene072624	0.851842	6.82E-61	-1.69E-46
MS.gene050303	MS.gene072624	0.818924	1.52E-52	-1.69E-46
MS.gene050330	MS.gene072624	-0.811015	8.65E-51	-1.69E-46
MS.gene050438	MS.gene072624	0.820457	6.79E-53	-1.69E-46
MS.gene050442	MS.gene072624	0.852262	5.18E-61	-1.69E-46
MS.gene050623	MS.gene072624	-0.84034	9.22E-58	-1.69E-46
MS.gene050719	MS.gene072624	0.981779	1.99E-153	-1.69E-46
MS.gene050721	MS.gene072624	0.981622	4.86E-153	-1.69E-46
MS.gene050724	MS.gene072624	0.970423	1.36E-131	-1.69E-46
MS.gene050780	MS.gene072624	0.839666	1.38E-57	-1.69E-46
MS.gene050815	MS.gene072624	0.807349	5.28E-50	-1.69E-46
MS.gene050824	MS.gene072624	0.877767	4.82E-69	-1.69E-46
MS.gene050844	MS.gene072624	0.822286	2.57E-53	-1.69E-46
MS.gene050953	MS.gene072624	0.805688	1.18E-49	-1.69E-46
MS.gene051247	MS.gene072624	0.814939	1.19E-51	-1.69E-46
MS.gene051349	MS.gene072624	0.831188	1.92E-55	-1.69E-46
MS.gene051452	MS.gene072624	0.803552	3.30E-49	-1.69E-46
MS.gene051744	MS.gene072624	0.800775	1.23E-48	-1.69E-46
MS.gene051757	MS.gene072624	0.839279	1.74E-57	-1.69E-46
MS.gene051790	MS.gene072624	0.813122	3.00E-51	-1.69E-46
MS.gene051983	MS.gene072624	0.803256	3.80E-49	-1.69E-46
MS.gene052012	MS.gene072624	0.844324	8.11E-59	-1.69E-46
MS.gene052020	MS.gene072624	0.805151	1.53E-49	-1.69E-46
MS.gene052176	MS.gene072624	0.854212	1.43E-61	-1.69E-46
MS.gene052286	MS.gene072624	0.810399	1.18E-50	-1.69E-46
MS.gene052323	MS.gene072624	0.818117	2.32E-52	-1.69E-46
MS.gene052376	MS.gene072624	0.807869	4.09E-50	-1.69E-46
MS.gene052384	MS.gene072624	0.800292	1.54E-48	-1.69E-46
MS.gene052856	MS.gene072624	0.809488	1.85E-50	-1.69E-46
MS.gene052896	MS.gene072624	0.827053	1.93E-54	-1.69E-46
MS.gene053006	MS.gene072624	0.801545	8.56E-49	-1.69E-46
MS.gene053008	MS.gene072624	0.818051	2.40E-52	-1.69E-46
MS.gene053216	MS.gene072624	0.814561	1.45E-51	-1.69E-46
MS.gene05415	MS.gene072624	0.802479	5.50E-49	-1.69E-46
MS.gene054468	MS.gene072624	0.820449	6.82E-53	-1.69E-46
MS.gene05468	MS.gene072624	0.801503	8.73E-49	-1.69E-46
MS.gene054930	MS.gene072624	0.817259	3.62E-52	-1.69E-46
MS.gene055603	MS.gene072624	0.80483	1.79E-49	-1.69E-46
MS.gene055623	MS.gene072624	0.806413	8.33E-50	-1.69E-46
MS.gene055778	MS.gene072624	0.82566	4.15E-54	-1.69E-46
MS.gene055818	MS.gene072624	0.813157	2.95E-51	-1.69E-46
MS.gene056506	MS.gene072624	0.838768	2.36E-57	-1.69E-46
MS.gene056760	MS.gene072624	0.808531	2.96E-50	-1.69E-46
MS.gene056875	MS.gene072624	0.801715	7.90E-49	-1.69E-46
MS.gene056979	MS.gene072624	0.802159	6.40E-49	-1.69E-46
MS.gene057026	MS.gene072624	0.82831	9.65E-55	-1.69E-46
MS.gene057140	MS.gene072624	0.839334	1.69E-57	-1.69E-46
MS.gene057194	MS.gene072624	0.801561	8.50E-49	-1.69E-46
MS.gene05761	MS.gene072624	0.817404	3.36E-52	-1.69E-46
MS.gene05795	MS.gene072624	0.810811	9.58E-51	-1.69E-46
MS.gene057967	MS.gene072624	0.816784	4.63E-52	-1.69E-46
MS.gene057980	MS.gene072624	0.816789	4.61E-52	-1.69E-46
MS.gene058084	MS.gene072624	0.841778	3.87E-58	-1.69E-46
MS.gene058139	MS.gene072624	0.801285	9.68E-49	-1.69E-46
MS.gene058146	MS.gene072624	0.821675	3.56E-53	-1.69E-46
MS.gene058182	MS.gene072624	0.822247	2.62E-53	-1.69E-46
MS.gene058238	MS.gene072624	0.802672	5.02E-49	-1.69E-46
MS.gene058399	MS.gene072624	0.809987	1.44E-50	-1.69E-46
MS.gene058636	MS.gene072624	0.80817	3.53E-50	-1.69E-46
MS.gene058792	MS.gene072624	0.802487	5.48E-49	-1.69E-46
MS.gene058906	MS.gene072624	0.851137	1.08E-60	-1.69E-46
MS.gene058979	MS.gene072624	0.801906	7.22E-49	-1.69E-46
MS.gene059249	MS.gene072624	0.822015	2.97E-53	-1.69E-46
MS.gene059789	MS.gene072624	0.803735	3.03E-49	-1.69E-46
MS.gene060297	MS.gene072624	0.811717	6.09E-51	-1.69E-46
MS.gene060322	MS.gene072624	0.845735	3.37E-59	-1.69E-46
MS.gene060572	MS.gene072624	0.842114	3.15E-58	-1.69E-46
MS.gene060586	MS.gene072624	0.82166	3.59E-53	-1.69E-46
MS.gene060619	MS.gene072624	0.805317	1.42E-49	-1.69E-46
MS.gene060683	MS.gene072624	0.815718	8.01E-52	-1.69E-46
MS.gene060685	MS.gene072624	0.808074	3.70E-50	-1.69E-46
MS.gene060803	MS.gene072624	0.823443	1.38E-53	-1.69E-46
MS.gene060907	MS.gene072624	0.80772	4.40E-50	-1.69E-46
MS.gene060998	MS.gene072624	0.8247	7.00E-54	-1.69E-46
MS.gene061040	MS.gene072624	-0.819836	9.42E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072624.t1	MTR_7g110980	95.331	257	11	1	2	258	6	261	0.0	504
MS.gene072624.t1	MTR_1g085560	70.543	258	68	6	2	258	1	251	5.69e-118	338
MS.gene072624.t1	MTR_1g117010	65.775	187	61	1	73	256	57	243	4.05e-88	261
MS.gene072624.t1	MTR_1g117010	65.775	187	61	1	73	256	57	243	4.05e-88	261
MS.gene072624.t1	MTR_3g463900	61.413	184	59	3	84	256	21	203	5.34e-75	227
MS.gene072624.t1	MTR_3g070500	63.158	171	55	2	91	254	62	231	1.44e-71	219
MS.gene072624.t1	MTR_4g075290	59.064	171	62	2	91	254	2	171	2.15e-68	209
MS.gene072624.t1	MTR_3g117750	58.480	171	63	2	94	257	13	182	3.05e-66	204
MS.gene072624.t1	MTR_7g116340	60.119	168	59	2	94	254	5	171	3.27e-66	203
MS.gene072624.t1	MTR_8g040180	57.576	165	64	2	96	254	21	185	4.42e-62	193
MS.gene072624.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	7.18e-61	196
MS.gene072624.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	1.03e-60	195
MS.gene072624.t1	MTR_4g086760	55.556	171	68	1	93	255	4	174	1.07e-60	194
MS.gene072624.t1	MTR_4g073650	49.468	188	87	2	75	255	29	215	6.13e-60	189
MS.gene072624.t1	MTR_8g079690	54.438	169	69	1	94	254	5	173	1.24e-59	192
MS.gene072624.t1	MTR_7g095750	58.333	168	61	2	95	254	9	175	1.69e-59	199
MS.gene072624.t1	MTR_3g070500	67.717	127	34	1	91	210	62	188	2.08e-56	179
MS.gene072624.t1	MTR_2g085075	54.054	148	63	4	105	251	469	612	1.57e-43	155
MS.gene072624.t1	MTR_3g070500	65.686	102	28	1	91	185	62	163	1.23e-40	138
MS.gene072624.t1	MTR_3g070500	65.347	101	28	1	91	184	62	162	2.05e-40	137
MS.gene072624.t1	MTR_7g105220	50.000	146	68	4	105	249	17	158	2.39e-39	134
MS.gene072624.t1	MTR_3g107660	46.784	171	82	2	96	258	13	182	9.03e-39	144
MS.gene072624.t1	MTR_1g011980	43.716	183	87	4	87	258	1	178	3.51e-38	142
MS.gene072624.t1	MTR_3g085705	61.616	99	33	3	139	237	27	120	2.58e-37	128
MS.gene072624.t1	MTR_8g036015	51.034	145	66	4	105	248	8	148	4.00e-35	124
MS.gene072624.t1	MTR_5g015500	46.528	144	72	4	107	249	314	453	2.60e-30	119
MS.gene072624.t1	MTR_5g015500	46.528	144	72	4	107	249	354	493	4.40e-30	118
MS.gene072624.t1	MTR_2g023120	43.333	150	74	7	107	251	22	165	5.56e-22	95.1
MS.gene072624.t1	MTR_6g084140	40.602	133	66	5	105	228	25	153	1.45e-18	85.1
MS.gene072624.t1	MTR_6g084140	40.602	133	66	5	105	228	8	136	1.59e-18	85.1
MS.gene072624.t1	MTR_8g442420	39.850	133	67	5	105	228	8	136	2.25e-17	81.6
MS.gene072624.t1	MTR_1g094065	34.437	151	82	6	105	251	87	224	2.60e-16	76.3
MS.gene072624.t1	MTR_2g461260	31.333	150	84	6	106	236	91	240	5.24e-15	73.6
MS.gene072624.t1	MTR_1g035360	29.932	147	95	5	105	251	86	224	2.55e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072624.t1	AT3G62030	60.465	258	100	1	2	257	1	258	8.17e-109	315
MS.gene072624.t1	AT3G62030	60.232	259	100	1	2	257	1	259	1.43e-108	314
MS.gene072624.t1	AT3G62030	69.585	217	59	3	46	258	100	313	2.81e-105	308
MS.gene072624.t1	AT5G13120	61.780	191	70	1	69	256	62	252	4.59e-87	259
MS.gene072624.t1	AT5G13120	61.780	191	70	1	69	256	66	256	4.90e-87	259
MS.gene072624.t1	AT5G58710	61.497	187	60	3	77	256	23	204	3.07e-76	230
MS.gene072624.t1	AT2G29960	60.963	187	65	2	77	256	16	201	1.61e-75	228
MS.gene072624.t1	AT2G29960	60.963	187	65	2	77	256	16	201	1.61e-75	228
MS.gene072624.t1	AT2G21130	61.310	168	57	2	94	254	6	172	5.59e-70	213
MS.gene072624.t1	AT4G38740	60.119	168	59	2	94	254	5	171	1.12e-68	209
MS.gene072624.t1	AT2G16600	58.824	170	58	3	94	254	6	172	5.50e-68	208
MS.gene072624.t1	AT3G56070	60.714	168	58	2	94	254	5	171	5.94e-68	208
MS.gene072624.t1	AT3G56070	60.714	168	58	2	94	254	5	171	5.94e-68	208
MS.gene072624.t1	AT3G55920	53.731	201	75	3	73	256	29	228	1.09e-67	209
MS.gene072624.t1	AT2G29960	56.684	187	63	3	77	256	16	191	2.18e-66	204
MS.gene072624.t1	AT4G34870	54.913	173	60	3	94	254	5	171	5.70e-61	190
MS.gene072624.t1	AT2G15790	55.556	171	68	1	93	255	4	174	3.50e-60	194
MS.gene072624.t1	AT3G63400	55.429	175	69	2	87	253	1	174	4.60e-60	195
MS.gene072624.t1	AT4G34960	52.571	175	76	1	90	257	44	218	6.61e-59	187
MS.gene072624.t1	AT2G38730	55.758	165	67	2	96	254	35	199	7.75e-59	186
MS.gene072624.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072624.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072624.t1	AT3G63400	55.429	175	69	2	87	253	1	174	1.60e-58	195
MS.gene072624.t1	AT2G16600	53.988	163	55	3	94	254	6	150	6.26e-57	179
MS.gene072624.t1	AT4G34960	57.031	128	48	1	90	210	44	171	1.10e-46	154
MS.gene072624.t1	AT3G44600	54.730	148	62	4	105	251	483	626	7.13e-43	154
MS.gene072624.t1	AT2G36130	49.315	146	69	4	105	249	17	158	4.07e-39	134
MS.gene072624.t1	AT1G01940	49.655	145	68	4	105	248	8	148	2.06e-35	124
MS.gene072624.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072624.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072624.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072624.t1	AT4G32420	43.017	179	85	4	87	253	1	174	7.85e-34	129
MS.gene072624.t1	AT4G32420	44.805	154	77	1	87	232	1	154	2.81e-33	128
MS.gene072624.t1	AT3G22920	42.442	172	79	7	94	254	5	167	8.44e-33	120
MS.gene072624.t1	AT5G67530	44.521	146	76	4	107	251	353	494	2.72e-30	119
MS.gene072624.t1	AT4G33060	44.056	143	73	6	107	246	22	160	5.79e-25	103
MS.gene072624.t1	AT1G53720	37.908	153	82	5	105	248	8	156	1.22e-19	87.0
MS.gene072624.t1	AT1G53720	37.908	153	82	5	105	248	8	156	2.97e-19	87.0
MS.gene072624.t1	AT2G47320	31.081	148	95	4	107	254	87	227	7.56e-15	72.0
MS.gene072624.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072624.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072624.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072624.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9
MS.gene072624.t1	AT3G66654	29.878	164	86	5	96	248	82	227	1.59e-12	65.9

Find 0 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAATATATATTATTGA+CGG	+	50572:27114-27133	None:intergenic	10.0%
!!	ATAAAAAAATCATTTCAGAT+AGG	+	50572:27443-27462	None:intergenic	15.0%
!!	GTTATATTTGAATATTAGAT+TGG	-	50572:28589-28608	MS.gene072624:CDS	15.0%
!!!	AAAATGTAAGTTTTTCATTT+TGG	-	50572:26900-26919	MS.gene072624:intron	15.0%
!!!	GTGTTGAAAATAAATTTTTT+AGG	+	50572:28309-28328	None:intergenic	15.0%
!!	AATAAAAAATTGACTACCAT+TGG	+	50572:28392-28411	None:intergenic	20.0%
!!	CATAGAAACAAATATAACAA+AGG	+	50572:28023-28042	None:intergenic	20.0%
!!	GATTAATGAACAAAAACAAT+TGG	+	50572:26671-26690	None:intergenic	20.0%
!!!	AAATGAGTAAATAGTCATTT+TGG	-	50572:27056-27075	MS.gene072624:CDS	20.0%
!!!	AATGTTTGTTTGTTTTTTTC+AGG	-	50572:26697-26716	MS.gene072624:CDS	20.0%
!!!	AGTTTTGAAGTAAAAATATC+AGG	+	50572:28445-28464	None:intergenic	20.0%
!!!	ATGTTTGTTTGTTTTTTTCA+GGG	-	50572:26698-26717	MS.gene072624:CDS	20.0%
!!!	ATTTTTTATTTGCACTGTTA+AGG	-	50572:28402-28421	MS.gene072624:intron	20.0%
!!!	TAACATAGCATTTTAAAGTT+TGG	-	50572:27845-27864	MS.gene072624:intron	20.0%
!!!	TACTTACTACTGTAATTTTA+AGG	-	50572:27378-27397	MS.gene072624:intron	20.0%
!!!	TTAATTACACTGTTTTAAAC+TGG	+	50572:28283-28302	None:intergenic	20.0%
!	AAAAATCAATAATCACTGGT+TGG	-	50572:28510-28529	MS.gene072624:intron	25.0%
!	AATCAAAGAATTCATGATTC+AGG	-	50572:27930-27949	MS.gene072624:intron	25.0%
!	ATCAAAGAATTCATGATTCA+GGG	-	50572:27931-27950	MS.gene072624:intron	25.0%
!	CAAGATCAATTAGATATAGT+AGG	-	50572:26849-26868	MS.gene072624:intron	25.0%
!	CTTAGCATATACAGAAAATA+AGG	+	50572:28623-28642	None:intergenic	25.0%
!	GCTTAAAAATCAATAATCAC+TGG	-	50572:28506-28525	MS.gene072624:intron	25.0%
!	GTATCTTTCATTTGTAACAT+TGG	-	50572:27148-27167	MS.gene072624:intron	25.0%
!	GTCCATAAAATTACTAACAA+AGG	-	50572:27241-27260	MS.gene072624:CDS	25.0%
!	TGAATTCTTTGATTATACGA+TGG	+	50572:27924-27943	None:intergenic	25.0%
!	TGGTTGTTTATTTACATGAT+TGG	-	50572:28530-28549	MS.gene072624:CDS	25.0%
!	TTGTTAATCACAAAAATCGT+TGG	-	50572:27541-27560	MS.gene072624:intron	25.0%
!!	GTCCTTTGTTAGTAATTTTA+TGG	+	50572:27246-27265	None:intergenic	25.0%
!!!	ATGGTTTTATTACTGTTATG+AGG	-	50572:27621-27640	MS.gene072624:intron	25.0%
!!!	GTTTTAAAACGAGATTGTTA+TGG	+	50572:27018-27037	None:intergenic	25.0%
!!!	TGGTTTTTAAAATTTCTCCT+TGG	-	50572:28249-28268	MS.gene072624:intron	25.0%
	AAACCTGAAAATGAGAAAGT+GGG	+	50572:26618-26637	None:intergenic	30.0%
	AAGGATGTTATGTTATGACA+TGG	-	50572:26962-26981	MS.gene072624:intron	30.0%
	AATTGACTACCATTGGTATT+AGG	+	50572:28385-28404	None:intergenic	30.0%
	ACTAACAAAGGACACATTTA+GGG	-	50572:27253-27272	MS.gene072624:CDS	30.0%
	AGGATGTTATGTTATGACAT+GGG	-	50572:26963-26982	MS.gene072624:intron	30.0%
	CACATTCAAAAAAGTAATCC+AGG	+	50572:27825-27844	None:intergenic	30.0%
	CCATGTATTTGTTTCAATGA+AGG	-	50572:28069-28088	MS.gene072624:intron	30.0%
	CCTTCATTGAAACAAATACA+TGG	+	50572:28072-28091	None:intergenic	30.0%
	GGACGTTTATTATCTTTACA+TGG	-	50572:27602-27621	MS.gene072624:intron	30.0%
	TACTAACAAAGGACACATTT+AGG	-	50572:27252-27271	MS.gene072624:CDS	30.0%
	TTAAACTGGAATTAAAGCCA+AGG	+	50572:28269-28288	None:intergenic	30.0%
	TTCTACGTCAAAGAAACATT+TGG	+	50572:27674-27693	None:intergenic	30.0%
	TTCTTTGATTATACGATGGA+AGG	+	50572:27920-27939	None:intergenic	30.0%
	TTTGGTCCTTAAATGTTTGA+GGG	-	50572:27074-27093	MS.gene072624:intron	30.0%
!	ATCAAAGGTGCAGAAAAATA+TGG	+	50572:27796-27815	None:intergenic	30.0%
!	CGGAAATTTTCAACTGTTTT+AGG	+	50572:27751-27770	None:intergenic	30.0%
!	TTTTGGTCCTTAAATGTTTG+AGG	-	50572:27073-27092	MS.gene072624:intron	30.0%
!!	CTAGATTTTTAGATAGTGCT+TGG	-	50572:28229-28248	MS.gene072624:intron	30.0%
!!	TAAAATCACATGTTGCTTTG+AGG	-	50572:26801-26820	MS.gene072624:intron	30.0%
!!!	ATTTTCAGGTTTGCACAAAT+GGG	-	50572:26626-26645	MS.gene072624:CDS	30.0%
	AAAGAATTCATGATTCAGGG+AGG	-	50572:27934-27953	MS.gene072624:intron	35.0%
	ACTGTAACCAATTTGTGACA+CGG	+	50572:26768-26787	None:intergenic	35.0%
	ACTTTAATGCCTCACACATT+TGG	-	50572:27307-27326	MS.gene072624:intron	35.0%
	ATGTGTTGTCTATGGTTCAA+AGG	-	50572:26735-26754	MS.gene072624:intron	35.0%
	CAAACCTGAAAATGAGAAAG+TGG	+	50572:26619-26638	None:intergenic	35.0%
	CACTCAAAATGTGTTTCCAT+TGG	-	50572:28108-28127	MS.gene072624:intron	35.0%
	CTGTGTTGTGATTAAGATGT+TGG	-	50572:27581-27600	MS.gene072624:intron	35.0%
	CTTTAATGCCTCACACATTT+GGG	-	50572:27308-27327	MS.gene072624:intron	35.0%
	GTGTTTGGACATGTTATTGA+TGG	-	50572:28724-28743	MS.gene072624:intron	35.0%
	GTTAGTACAATAATTGTCCC+TGG	-	50572:26928-26947	MS.gene072624:intron	35.0%
	GTTTCTTTGACGTAGAAACT+GGG	-	50572:27677-27696	MS.gene072624:CDS	35.0%
	TAATCCAGGTACAAGATCAA+AGG	+	50572:27811-27830	None:intergenic	35.0%
	TGAAACAAATACATGGCAAG+TGG	+	50572:28065-28084	None:intergenic	35.0%
	TGGACATGTTATTGATGGAA+TGG	-	50572:28729-28748	MS.gene072624:intron	35.0%
	TGTTTCTTTGACGTAGAAAC+TGG	-	50572:27676-27695	MS.gene072624:CDS	35.0%
	TTGGTCCTTAAATGTTTGAG+GGG	-	50572:27075-27094	MS.gene072624:intron	35.0%
	TTTCTTTGACGTAGAAACTG+GGG	-	50572:27678-27697	MS.gene072624:CDS	35.0%
!	GAAACATTTGGTAGTCACTT+TGG	+	50572:27662-27681	None:intergenic	35.0%
!	TGAAAATGAGAAAGTGGGTT+GGG	+	50572:26613-26632	None:intergenic	35.0%
!!	ATTTTGATCCCAAATGTGTG+AGG	+	50572:27319-27338	None:intergenic	35.0%
!!!	CATTTTCAGGTTTGCACAAA+TGG	-	50572:26625-26644	MS.gene072624:CDS	35.0%
!!!	TTTTCAGGTTTGCACAAATG+GGG	-	50572:26627-26646	MS.gene072624:CDS	35.0%
	AACATGCAACAGAGACATAC+AGG	+	50572:28192-28211	None:intergenic	40.0%
	ACTACCATTGGTATTAGGAC+CGG	+	50572:28380-28399	None:intergenic	40.0%
	ATCCTTCAACAACATCTCCA+GGG	+	50572:26948-26967	None:intergenic	40.0%
	CATGATTGGAAAGCTCACTA+TGG	-	50572:28544-28563	MS.gene072624:CDS	40.0%
	CCTTGCAGAATCGTTAATTG+CGG	-	50572:28808-28827	MS.gene072624:CDS	40.0%
	CTGAAAATGAGAAAGTGGGT+TGG	+	50572:26614-26633	None:intergenic	40.0%
	GAACCATAGACAACACATCT+TGG	+	50572:26733-26752	None:intergenic	40.0%
	GACAACCCCTCAAACATTTA+AGG	+	50572:27083-27102	None:intergenic	40.0%
	GAGAAAGGATACGGTTACAA+AGG	-	50572:27889-27908	MS.gene072624:intron	40.0%
	TAATCTTGTGCAGGAGAGAA+AGG	-	50572:27874-27893	MS.gene072624:intron	40.0%
	TAGCCAAGATGTGTTGTCTA+TGG	-	50572:26727-26746	MS.gene072624:intron	40.0%
	TCACATACCGTGTCACAAAT+TGG	-	50572:26758-26777	MS.gene072624:intron	40.0%
	TGGCTTCAATAATCTTGTGC+AGG	-	50572:27865-27884	MS.gene072624:intron	40.0%
	TTCTTTGACGTAGAAACTGG+GGG	-	50572:27679-27698	MS.gene072624:CDS	40.0%
	TTGATGGAATGGATGTTGTG+AGG	-	50572:28740-28759	MS.gene072624:intron	40.0%
!	ACATGTCGATTGTCTAACCA+CGG	+	50572:28703-28722	None:intergenic	40.0%
!	ACGATTCTGCAAGGCTTTTT+AGG	+	50572:28802-28821	None:intergenic	40.0%
!	AGATTGAAGCAGTTGAGTTG+AGG	+	50572:26590-26609	None:intergenic	40.0%
!	ATCTTTGGGCAGAATCGTTT+TGG	-	50572:27705-27724	MS.gene072624:CDS	40.0%
!	CAACCCACTTTCTCATTTTC+AGG	-	50572:26612-26631	MS.gene072624:CDS	40.0%
!	CGATTCTGCAAGGCTTTTTA+GGG	+	50572:28801-28820	None:intergenic	40.0%
!	GTTTGCACAAATGGGGTTTT+GGG	-	50572:26634-26653	MS.gene072624:CDS	40.0%
!	TCTTTGGGCAGAATCGTTTT+GGG	-	50572:27706-27725	MS.gene072624:CDS	40.0%
!	TTTTCTGCCACGCAACAATT+TGG	-	50572:26824-26843	MS.gene072624:intron	40.0%
!!	AGAATCGTTTTGGGCTTGTT+TGG	-	50572:27715-27734	MS.gene072624:CDS	40.0%
	AATGCCGGTCCTAATACCAA+TGG	-	50572:28373-28392	MS.gene072624:intron	45.0%
	AATTTCCGTGCTTTGTGCAC+AGG	-	50572:27763-27782	MS.gene072624:intron	45.0%
	AGAAACTGGGGGTCAATCTT+TGG	-	50572:27690-27709	MS.gene072624:CDS	45.0%
	ATCGGTGGAGCTAGTATCTA+TGG	-	50572:28140-28159	MS.gene072624:intron	45.0%
	CATCCTTCAACAACATCTCC+AGG	+	50572:26949-26968	None:intergenic	45.0%
	CCGCAATTAACGATTCTGCA+AGG	+	50572:28811-28830	None:intergenic	45.0%
	CTTCTTGCAGTGAAGCATGT+TGG	-	50572:28328-28347	MS.gene072624:intron	45.0%
	GAAACTGGGGGTCAATCTTT+GGG	-	50572:27691-27710	MS.gene072624:CDS	45.0%
	GACAATCGACATGTCGTGTT+TGG	-	50572:28709-28728	MS.gene072624:intron	45.0%
	TCTTGCTCCAAATTGTTGCG+TGG	+	50572:26834-26853	None:intergenic	45.0%
	TGCACCTTTGATCTTGTACC+TGG	-	50572:27804-27823	MS.gene072624:intron	45.0%
	TGTGCAGGAGAGAAAGGATA+CGG	-	50572:27880-27899	MS.gene072624:intron	45.0%
	TTGAGTCTCAGGAAACAAGC+AGG	-	50572:28767-28786	MS.gene072624:intron	45.0%
	TTGGAAAGCTCACTATGGCA+TGG	-	50572:28549-28568	MS.gene072624:CDS	45.0%
	TTTGCCATGCTCAAAACTCC+AGG	+	50572:28355-28374	None:intergenic	45.0%
!	AATGTGTTTCCATTGGCTGC+AGG	-	50572:28115-28134	MS.gene072624:intron	45.0%
!	ATGTGTTTCCATTGGCTGCA+GGG	-	50572:28116-28135	MS.gene072624:intron	45.0%
!	GGTTTGCACAAATGGGGTTT+TGG	-	50572:26633-26652	MS.gene072624:CDS	45.0%
!!	GTTTTGAGCATGGCAAATGC+CGG	-	50572:28358-28377	MS.gene072624:intron	45.0%
	GTCCCTGGAGATGTTGTTGA+AGG	-	50572:26943-26962	MS.gene072624:intron	50.0%
	TGTGAGGACACTTGAGTCTC+AGG	-	50572:28756-28775	MS.gene072624:intron	50.0%
!	TTCCATTGGCTGCAGGGAAT+CGG	-	50572:28122-28141	MS.gene072624:intron	50.0%
!!	CGTTTTGGGCTTGTTTGGAG+AGG	-	50572:27720-27739	MS.gene072624:CDS	50.0%
!!!	TGGTCCTGGAGTTTTGAGCA+TGG	-	50572:28348-28367	MS.gene072624:intron	50.0%
	CAGGGAGGAGACTTCACTGA+GGG	-	50572:27949-27968	MS.gene072624:intron	55.0%
	GCAGTGAAGCATGTTGGTCC+TGG	-	50572:28334-28353	MS.gene072624:intron	55.0%
	GCATATGATCGCAGACTCCG+TGG	-	50572:28683-28702	MS.gene072624:CDS	55.0%
	GCTTGCCTGTGCACAAAGCA+CGG	+	50572:27771-27790	None:intergenic	55.0%
	TCAGGGAGGAGACTTCACTG+AGG	-	50572:27948-27967	MS.gene072624:intron	55.0%
	TGCGGAGAACTGCCCATAGA+TGG	-	50572:28826-28845	MS.gene072624:CDS	55.0%
!	CATTGGCTGCAGGGAATCGG+TGG	-	50572:28125-28144	MS.gene072624:intron	60.0%
!!	CACCGATTCCCTGCAGCCAA+TGG	+	50572:28127-28146	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
50572	gene	26571	28852	26571	ID=MS.gene072624
50572	mRNA	26571	28852	26571	ID=MS.gene072624.t1;Parent=MS.gene072624
50572	exon	28790	28852	28790	ID=MS.gene072624.t1.exon1;Parent=MS.gene072624.t1
50572	CDS	28790	28852	28790	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	28519	28704	28519	ID=MS.gene072624.t1.exon2;Parent=MS.gene072624.t1
50572	CDS	28519	28704	28519	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	27639	27780	27639	ID=MS.gene072624.t1.exon3;Parent=MS.gene072624.t1
50572	CDS	27639	27780	27639	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	27448	27536	27448	ID=MS.gene072624.t1.exon4;Parent=MS.gene072624.t1
50572	CDS	27448	27536	27448	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	27232	27286	27232	ID=MS.gene072624.t1.exon5;Parent=MS.gene072624.t1
50572	CDS	27232	27286	27232	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	27000	27085	27000	ID=MS.gene072624.t1.exon6;Parent=MS.gene072624.t1
50572	CDS	27000	27085	27000	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1
50572	exon	26571	26726	26571	ID=MS.gene072624.t1.exon7;Parent=MS.gene072624.t1
50572	CDS	26571	26726	26571	ID=cds.MS.gene072624.t1;Parent=MS.gene072624.t1

Gene Sequence

>MS.gene072624

GTGATGGCGTTTTCATCCTCAACTCAACTGCTTCAATCTCCCAACCCACTTTCTCATTTTCAGGTTTGCACAAATGGGGTTTTGGGTTTTTAATGTTCCAATTGTTTTTGTTCATTAATCATTCTAAATGTTTGTTTGTTTTTTTCAGGGTAATTTTAGCCAAGATGTGTTGTCTATGGTTCAAAGGTCACATACCGTGTCACAAATTGGTTACAGTAAATCATTGTCATTAAAATCACATGTTGCTTTGAGGTTTTCTGCCACGCAACAATTTGGAGCAAGATCAATTAGATATAGTAGGAGAATCACATGTGCAGCTGCTGCTTCAGAAAATGTAAGTTTTTCATTTTGGAATTTGTTAGTACAATAATTGTCCCTGGAGATGTTGTTGAAGGATGTTATGTTATGACATGGGCGATAATAATACTAATGTTTTATCTATTTCCATAACAATCTCGTTTTAAAACTAGTATCAAAGTGATAATAAATGAGTAAATAGTCATTTTGGTCCTTAAATGTTTGAGGGGTTGTCACGATAGTCCGTCAATAATATATATTGAAATTACATAACATATATGTATCTTTCATTTGTAACATTGGTTCTTAAATGTGTCTTTTGTTAGTTAGTTAGTTAGTTTGATCTTTGAATGTTTTTCAGTTAGTTAATTTAGTCCATAAAATTACTAACAAAGGACACATTTAGGGATGTTTTCGTAATTTGATAAATTCGATGACTACTTTAATGCCTCACACATTTGGGATCAAAATGACTGTTTACTCGAGAATACTTATAGTCTTATACAATGTTACTTACTACTGTAATTTTAAGGAAAACAGAAAACGAGTAGAAAATGTTTTCTTAAACTAAACCTATCTGAAATGATTTTTTTATATTTAGACTGCTTGTTTGTTGTTGTTTGATTTCATTAAATGTTTGTATTGTTTACGTGTTTATAATCTAATTGACTATTTGTTAATCACAAAAATCGTTGGCATTGTTCAATAGTTGACTGTGTTGTGATTAAGATGTTGGACGTTTATTATCTTTACATGGTTTTATTACTGTTATGAGGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGACGTAGAAACTGGGGGTCAATCTTTGGGCAGAATCGTTTTGGGCTTGTTTGGAGAGGTTGCTCCTAAAACAGTTGAAAATTTCCGTGCTTTGTGCACAGGCAAGCAACCATATTTTTCTGCACCTTTGATCTTGTACCTGGATTACTTTTTTGAATGTGTAACATAGCATTTTAAAGTTTGGCTTCAATAATCTTGTGCAGGAGAGAAAGGATACGGTTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAGGGAGGAGACTTCACTGAGGGAAATGTGAGATTTGTTGCATTTGTTTGTTTGCTTGTATACGTGAATAGCCTTTGTTATATTTGTTTCTATGTTAATGTGAACATTTACTTCCACTTGCCATGTATTTGTTTCAATGAAGGTAATTATGTTTCTTCTCACTCAAAATGTGTTTCCATTGGCTGCAGGGAATCGGTGGAGCTAGTATCTATGGTTCTAGTTTCGAAGATGAGAGTTTTGCCTGTATGTCTCTGTTGCATGTTGTACAGTAGTAGTATATCTAGATTTTTAGATAGTGCTTGGTTTTTAAAATTTCTCCTTGGCTTTAATTCCAGTTTAAAACAGTGTAATTAATCTCCTAAAAAATTTATTTTCAACACTTCTTGCAGTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTTAAGGTGAGAGACATGTACTGTCCTGATATTTTTACTTCAAAACTTTATACGCTTTAATGACTGTAAAATTCGAATTTCTGATTAAGCTTAAAAATCAATAATCACTGGTTGGTTGTTTATTTACATGATTGGAAAGCTCACTATGGCATGGTATATATAGCTCTATCTGTTATATTTGAATATTAGATTGGAGAACATTCCTTATTTTCTGTATATGCTAAGTAACATGTTTAGTTTACTTACTAATATATTCAAATATTCTGCATATGATCGCAGACTCCGTGGTTAGACAATCGACATGTCGTGTTTGGACATGTTATTGATGGAATGGATGTTGTGAGGACACTTGAGTCTCAGGAAACAAGCAGGTTAGATATCCCTAAAAAGCCTTGCAGAATCGTTAATTGCGGAGAACTGCCCATAGATGGTTGA

Protein sequence

>MS.gene072624.t1

VMAFSSSTQLLQSPNPLSHFQGNFSQDVLSMVQRSHTVSQIGYSKSLSLKSHVALRFSATQQFGARSIRYSRRITCAAAASENVQELQAKVTTKCFFDVETGGQSLGRIVLGLFGEVAPKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTEGNGIGGASIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVNCGELPIDG