Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072757.t1 | XP_003611045.2 | 89.5 | 333 | 32 | 1 | 1 | 333 | 1 | 330 | 3.50E-151 | 544.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072757.t1 | Q94AX5 | 76.8 | 237 | 53 | 2 | 98 | 333 | 114 | 349 | 6.2e-88 | 325.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072757.t1 | G7KAQ7 | 89.5 | 333 | 32 | 1 | 1 | 333 | 1 | 330 | 2.5e-151 | 544.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072757 | 0.874742 | 5.33E-68 | -1.69E-46 |
| MS.gene049171 | MS.gene072757 | 0.82011 | 8.15E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene072757 | 0.80774 | 4.36E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene072757 | 0.839187 | 1.84E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene072757 | 0.842256 | 2.89E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene072757 | 0.844413 | 7.68E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene072757 | 0.828474 | 8.81E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene072757 | 0.841601 | 4.30E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene072757 | 0.861522 | 9.67E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene072757 | 0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene072757 | 0.852813 | 3.61E-61 | -1.69E-46 |
| MS.gene049614 | MS.gene072757 | 0.846177 | 2.56E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene072757 | 0.836943 | 6.96E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene072757 | 0.823834 | 1.12E-53 | -1.69E-46 |
| MS.gene049760 | MS.gene072757 | 0.834335 | 3.18E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene072757 | 0.887986 | 8.81E-73 | -1.69E-46 |
| MS.gene050076 | MS.gene072757 | 0.839702 | 1.35E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene072757 | 0.838206 | 3.30E-57 | -1.69E-46 |
| MS.gene050165 | MS.gene072757 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene072757 | 0.821135 | 4.74E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene072757 | 0.818492 | 1.91E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene072757 | 0.845264 | 4.53E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene072757 | 0.804912 | 1.72E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene072757 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene072757 | 0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene072757 | 0.83274 | 7.96E-56 | -1.69E-46 |
| MS.gene050625 | MS.gene072757 | 0.823297 | 1.49E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene072757 | 0.843652 | 1.23E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene072757 | 0.815318 | 9.83E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene072757 | 0.860363 | 2.18E-63 | -1.69E-46 |
| MS.gene050767 | MS.gene072757 | 0.879173 | 1.55E-69 | -1.69E-46 |
| MS.gene050770 | MS.gene072757 | 0.881115 | 3.14E-70 | -1.69E-46 |
| MS.gene050772 | MS.gene072757 | 0.868808 | 4.96E-66 | -1.69E-46 |
| MS.gene050783 | MS.gene072757 | 0.825717 | 4.03E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene072757 | 0.815674 | 8.19E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene072757 | 0.847808 | 9.15E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene072757 | 0.855584 | 5.72E-62 | -1.69E-46 |
| MS.gene05101 | MS.gene072757 | 0.84494 | 5.54E-59 | -1.69E-46 |
| MS.gene05105 | MS.gene072757 | 0.854786 | 9.76E-62 | -1.69E-46 |
| MS.gene051228 | MS.gene072757 | 0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene072757 | 0.867206 | 1.62E-65 | -1.69E-46 |
| MS.gene051471 | MS.gene072757 | 0.814866 | 1.24E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene072757 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene072757 | 0.820862 | 5.48E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene072757 | 0.88494 | 1.25E-71 | -1.69E-46 |
| MS.gene051692 | MS.gene072757 | 0.854942 | 8.79E-62 | -1.69E-46 |
| MS.gene051694 | MS.gene072757 | 0.852143 | 5.60E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene072757 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene051858 | MS.gene072757 | 0.847567 | 1.07E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene072757 | 0.825559 | 4.39E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene072757 | 0.827467 | 1.54E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene072757 | 0.801485 | 8.80E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene072757 | 0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene072757 | 0.861669 | 8.72E-64 | -1.69E-46 |
| MS.gene052290 | MS.gene072757 | 0.85651 | 3.06E-62 | -1.69E-46 |
| MS.gene052310 | MS.gene072757 | 0.859961 | 2.88E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene072757 | 0.871344 | 7.34E-67 | -1.69E-46 |
| MS.gene052326 | MS.gene072757 | 0.836072 | 1.16E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene072757 | 0.855571 | 5.77E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene072757 | 0.877014 | 8.83E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene072757 | 0.848197 | 7.15E-60 | -1.69E-46 |
| MS.gene052484 | MS.gene072757 | 0.832908 | 7.23E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene072757 | 0.8431 | 1.72E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene072757 | 0.815144 | 1.07E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene072757 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene072757 | 0.859965 | 2.87E-63 | -1.69E-46 |
| MS.gene052670 | MS.gene072757 | 0.802958 | 4.38E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene072757 | 0.820582 | 6.36E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene072757 | 0.872505 | 3.02E-67 | -1.69E-46 |
| MS.gene053103 | MS.gene072757 | 0.87296 | 2.13E-67 | -1.69E-46 |
| MS.gene053104 | MS.gene072757 | 0.839636 | 1.41E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene072757 | 0.857593 | 1.47E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene072757 | 0.818654 | 1.75E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene072757 | 0.87323 | 1.73E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene072757 | 0.86373 | 2.02E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene072757 | 0.896633 | 3.06E-76 | -1.69E-46 |
| MS.gene053436 | MS.gene072757 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene072757 | 0.831487 | 1.62E-55 | -1.69E-46 |
| MS.gene053579 | MS.gene072757 | 0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene072757 | 0.866799 | 2.19E-65 | -1.69E-46 |
| MS.gene053813 | MS.gene072757 | 0.841338 | 5.05E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene072757 | 0.801572 | 8.45E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene072757 | 0.828342 | 9.48E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene072757 | 0.833878 | 4.14E-56 | -1.69E-46 |
| MS.gene054376 | MS.gene072757 | 0.85945 | 4.10E-63 | -1.69E-46 |
| MS.gene054408 | MS.gene072757 | 0.851636 | 7.80E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene072757 | 0.811661 | 6.26E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene072757 | 0.837081 | 6.41E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene072757 | 0.844965 | 5.45E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene072757 | 0.885245 | 9.60E-72 | -1.69E-46 |
| MS.gene054803 | MS.gene072757 | 0.880496 | 5.23E-70 | -1.69E-46 |
| MS.gene054804 | MS.gene072757 | 0.885358 | 8.71E-72 | -1.69E-46 |
| MS.gene054927 | MS.gene072757 | 0.820464 | 6.77E-53 | -1.69E-46 |
| MS.gene054955 | MS.gene072757 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene072757 | 0.875907 | 2.13E-68 | -1.69E-46 |
| MS.gene055116 | MS.gene072757 | 0.824882 | 6.34E-54 | -1.69E-46 |
| MS.gene055206 | MS.gene072757 | 0.836979 | 6.81E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene072757 | 0.817607 | 3.02E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene072757 | 0.823135 | 1.63E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene072757 | 0.817172 | 3.79E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene072757 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene072757 | 0.836286 | 1.02E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene072757 | 0.86252 | 4.78E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene072757 | 0.861515 | 9.72E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene072757 | 0.802223 | 6.21E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene072757 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene072757 | 0.876244 | 1.63E-68 | -1.69E-46 |
| MS.gene055502 | MS.gene072757 | 0.824971 | 6.04E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene072757 | 0.851507 | 8.49E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene072757 | 0.854519 | 1.17E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene072757 | 0.863423 | 2.52E-64 | -1.69E-46 |
| MS.gene055941 | MS.gene072757 | 0.82712 | 1.86E-54 | -1.69E-46 |
| MS.gene05602 | MS.gene072757 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene072757 | 0.857399 | 1.68E-62 | -1.69E-46 |
| MS.gene056191 | MS.gene072757 | 0.810725 | 9.99E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene072757 | 0.865664 | 5.01E-65 | -1.69E-46 |
| MS.gene056407 | MS.gene072757 | 0.848585 | 5.58E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene072757 | 0.813387 | 2.63E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene072757 | 0.802893 | 4.52E-49 | -1.69E-46 |
| MS.gene056452 | MS.gene072757 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene072757 | 0.817912 | 2.58E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene072757 | 0.836258 | 1.04E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene072757 | 0.818231 | 2.18E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene072757 | 0.874448 | 6.70E-68 | -1.69E-46 |
| MS.gene057048 | MS.gene072757 | 0.811631 | 6.35E-51 | -1.69E-46 |
| MS.gene057123 | MS.gene072757 | 0.864735 | 9.82E-65 | -1.69E-46 |
| MS.gene057129 | MS.gene072757 | 0.903814 | 2.35E-79 | -1.69E-46 |
| MS.gene057146 | MS.gene072757 | 0.887824 | 1.02E-72 | -1.69E-46 |
| MS.gene057285 | MS.gene072757 | 0.806653 | 7.41E-50 | -1.69E-46 |
| MS.gene057295 | MS.gene072757 | 0.835773 | 1.38E-56 | -1.69E-46 |
| MS.gene057310 | MS.gene072757 | 0.801729 | 7.85E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene072757 | 0.834002 | 3.85E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene072757 | 0.804486 | 2.11E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene072757 | 0.902026 | 1.48E-78 | -1.69E-46 |
| MS.gene057823 | MS.gene072757 | 0.817312 | 3.52E-52 | -1.69E-46 |
| MS.gene058006 | MS.gene072757 | 0.844361 | 7.93E-59 | -1.69E-46 |
| MS.gene058019 | MS.gene072757 | 0.867267 | 1.55E-65 | -1.69E-46 |
| MS.gene058130 | MS.gene072757 | 0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene058233 | MS.gene072757 | 0.812788 | 3.55E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene072757 | 0.891286 | 4.56E-74 | -1.69E-46 |
| MS.gene058323 | MS.gene072757 | 0.86028 | 2.31E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene072757 | 0.850215 | 1.96E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene072757 | 0.825719 | 4.02E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene072757 | 0.884439 | 1.92E-71 | -1.69E-46 |
| MS.gene058723 | MS.gene072757 | 0.822195 | 2.70E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene072757 | 0.804295 | 2.31E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene072757 | 0.802755 | 4.82E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene072757 | 0.814276 | 1.67E-51 | -1.69E-46 |
| MS.gene058993 | MS.gene072757 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene072757 | 0.804518 | 2.08E-49 | -1.69E-46 |
| MS.gene059023 | MS.gene072757 | 0.805466 | 1.32E-49 | -1.69E-46 |
| MS.gene059029 | MS.gene072757 | 0.815749 | 7.88E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene072757 | 0.802648 | 5.08E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene072757 | 0.853027 | 3.13E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene072757 | 0.890114 | 1.32E-73 | -1.69E-46 |
| MS.gene059597 | MS.gene072757 | 0.821902 | 3.15E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene072757 | 0.83687 | 7.26E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene072757 | 0.831689 | 1.45E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene072757 | 0.881121 | 3.12E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene072757 | 0.864619 | 1.07E-64 | -1.69E-46 |
| MS.gene059695 | MS.gene072757 | 0.873288 | 1.65E-67 | -1.69E-46 |
| MS.gene059711 | MS.gene072757 | 0.819229 | 1.30E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene072757 | 0.853096 | 2.99E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene072757 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene072757 | 0.848769 | 4.96E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene072757 | 0.889741 | 1.85E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene072757 | 0.829157 | 6.02E-55 | -1.69E-46 |
| MS.gene060356 | MS.gene072757 | 0.809237 | 2.09E-50 | -1.69E-46 |
| MS.gene060403 | MS.gene072757 | 0.846717 | 1.82E-59 | -1.69E-46 |
| MS.gene060482 | MS.gene072757 | 0.802473 | 5.52E-49 | -1.69E-46 |
| MS.gene060675 | MS.gene072757 | 0.80112 | 1.05E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene072757 | 0.856422 | 3.25E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene072757 | 0.827706 | 1.35E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene072757 | 0.830292 | 3.19E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene072757 | 0.865504 | 5.63E-65 | -1.69E-46 |
| MS.gene061041 | MS.gene072757 | 0.832999 | 6.86E-56 | -1.69E-46 |
| MS.gene061051 | MS.gene072757 | -0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene061134 | MS.gene072757 | 0.804145 | 2.49E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene072757 | 0.868706 | 5.35E-66 | -1.69E-46 |
| MS.gene061171 | MS.gene072757 | 0.835079 | 2.07E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene072757 | 0.909882 | 3.48E-82 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072757.t1 | MTR_5g009810 | 92.192 | 333 | 23 | 1 | 1 | 333 | 1 | 330 | 0.0 | 570 |
| MS.gene072757.t1 | MTR_1g046730 | 44.076 | 211 | 86 | 5 | 140 | 333 | 150 | 345 | 2.12e-43 | 154 |
| MS.gene072757.t1 | MTR_7g079850 | 35.204 | 196 | 110 | 4 | 142 | 331 | 76 | 260 | 2.42e-22 | 95.9 |
| MS.gene072757.t1 | MTR_1g111390 | 33.810 | 210 | 113 | 5 | 141 | 333 | 7 | 207 | 2.43e-21 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072757.t1 | AT1G64150 | 68.727 | 275 | 71 | 4 | 73 | 333 | 76 | 349 | 2.79e-108 | 322 |
| MS.gene072757.t1 | AT4G13590 | 42.365 | 203 | 101 | 4 | 140 | 333 | 144 | 339 | 1.20e-41 | 150 |
| MS.gene072757.t1 | AT4G13590 | 42.365 | 203 | 101 | 5 | 140 | 333 | 144 | 339 | 1.21e-41 | 150 |
| MS.gene072757.t1 | AT5G36290 | 34.694 | 196 | 112 | 3 | 144 | 333 | 87 | 272 | 7.07e-23 | 97.8 |
| MS.gene072757.t1 | AT5G36290 | 34.694 | 196 | 112 | 3 | 144 | 333 | 87 | 272 | 7.07e-23 | 97.8 |
| MS.gene072757.t1 | AT1G68650 | 33.649 | 211 | 127 | 3 | 135 | 335 | 1 | 208 | 4.29e-21 | 91.3 |
| MS.gene072757.t1 | AT1G25520 | 33.178 | 214 | 114 | 6 | 141 | 335 | 7 | 210 | 2.18e-18 | 84.0 |
Find 62 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAATTCAATTCCTATATT+TGG | 0.111357 | 5.3:+3621271 | MS.gene072757:CDS |
| TGGTGGCTCTTAAATGGTTT+TGG | 0.262359 | 5.3:-3620851 | None:intergenic |
| GAAAAGTGGTGGCTCTTAAA+TGG | 0.270841 | 5.3:-3620857 | None:intergenic |
| TGCAGCAGCTTCTTCACCCT+TGG | 0.304179 | 5.3:+3624072 | MS.gene072757:CDS |
| TTGACGAACTCTTGCCGTTC+AGG | 0.307648 | 5.3:+3622545 | MS.gene072757:CDS |
| ATCGACTTCAGGTGTACTTC+GGG | 0.314626 | 5.3:+3623403 | MS.gene072757:intron |
| GAATTTCATTAAAATAAGTA+TGG | 0.329257 | 5.3:+3624923 | MS.gene072757:CDS |
| GTACTTGGTGGCTCTTTACT+AGG | 0.355968 | 5.3:+3624598 | MS.gene072757:CDS |
| TATTGCTGCTGTTTGCCTAT+TGG | 0.359627 | 5.3:+3623170 | MS.gene072757:CDS |
| TCACCCTTGGGAGTCATAGC+TGG | 0.372547 | 5.3:+3624085 | MS.gene072757:CDS |
| GCAGCAGCTTCTTCACCCTT+GGG | 0.388248 | 5.3:+3624073 | MS.gene072757:CDS |
| CGCACTTCAACATACTTATC+CGG | 0.403598 | 5.3:+3621219 | MS.gene072757:CDS |
| TTCCATGACCTATATTCTAT+AGG | 0.422171 | 5.3:-3624873 | None:intergenic |
| TCACCAACATCTCCAAATAT+AGG | 0.423227 | 5.3:-3621283 | None:intergenic |
| ATTCCTATATTTGGAGATGT+TGG | 0.440338 | 5.3:+3621280 | MS.gene072757:CDS |
| AATCGACTTCAGGTGTACTT+CGG | 0.440864 | 5.3:+3623402 | MS.gene072757:intron |
| CTTCGGGGTCTCTACCCTGC+TGG | 0.449149 | 5.3:+3623419 | MS.gene072757:CDS |
| TTGCAGAGAAGAGGAGGAGG+AGG | 0.451794 | 5.3:-3620917 | None:intergenic |
| ACACATTCTGTGTTGCCAAT+TGG | 0.451928 | 5.3:-3621132 | None:intergenic |
| ACAGCAGCAATATCATCAAT+AGG | 0.453364 | 5.3:-3623159 | None:intergenic |
| TTGAGATTGCAGAGAAGAGG+AGG | 0.454850 | 5.3:-3620923 | None:intergenic |
| AATTTGAGATTGCAGAGAAG+AGG | 0.460912 | 5.3:-3620926 | None:intergenic |
| TACCGATTCTCAATGCCAAT+TGG | 0.470082 | 5.3:+3621117 | MS.gene072757:CDS |
| TGGTCATGGTGTTGCAACTT+TGG | 0.476822 | 5.3:+3624117 | MS.gene072757:CDS |
| AGGTGCTACCTATAGAATAT+AGG | 0.480631 | 5.3:+3624865 | MS.gene072757:intron |
| AGATTGCAGAGAAGAGGAGG+AGG | 0.482578 | 5.3:-3620920 | None:intergenic |
| TGCCAATTGGCATTGAGAAT+CGG | 0.485672 | 5.3:-3621119 | None:intergenic |
| GCGCAACATGTTAGATGCTC+CGG | 0.487827 | 5.3:+3624959 | MS.gene072757:CDS |
| CACTAGATGAGGCATCCAGC+AGG | 0.488503 | 5.3:-3623434 | None:intergenic |
| TATATGCAGATAGCCGTACT+TGG | 0.497430 | 5.3:+3624583 | MS.gene072757:intron |
| ACTTCAGCACTCACCAATTG+TGG | 0.507264 | 5.3:-3623737 | None:intergenic |
| TAGTAAAGAGCCACCAAGTA+CGG | 0.507339 | 5.3:-3624596 | None:intergenic |
| TCTTCTGATGATACTGATGA+TGG | 0.517795 | 5.3:+3621154 | MS.gene072757:CDS |
| GGGAGTCATAGCTGGATCAC+TGG | 0.523241 | 5.3:+3624093 | MS.gene072757:CDS |
| GTCATAGCTGGATCACTGGC+TGG | 0.529444 | 5.3:+3624097 | MS.gene072757:CDS |
| GCTGGATCACTGGCTGGTCA+TGG | 0.529965 | 5.3:+3624103 | MS.gene072757:CDS |
| GATGTTGGTGACTTAAGCAC+AGG | 0.539954 | 5.3:+3621295 | MS.gene072757:CDS |
| ACTGTCATATCTGTCGCTCT+AGG | 0.541366 | 5.3:+3622505 | MS.gene072757:CDS |
| TACTTGGTGGCTCTTTACTA+GGG | 0.542656 | 5.3:+3624599 | MS.gene072757:CDS |
| AAATCAGAAGCAGCAACTGC+CGG | 0.549140 | 5.3:-3621238 | None:intergenic |
| AAAATCAGATGATGAACAGA+AGG | 0.549624 | 5.3:+3623464 | MS.gene072757:CDS |
| GGGTGAAGAAGCTGCTGCAA+GGG | 0.562488 | 5.3:-3624068 | None:intergenic |
| AGGGTGAAGAAGCTGCTGCA+AGG | 0.572131 | 5.3:-3624069 | None:intergenic |
| ATGCAGATAGCCGTACTTGG+TGG | 0.574843 | 5.3:+3624586 | MS.gene072757:intron |
| TTAGCAGCTAGAAATTCAGC+TGG | 0.576869 | 5.3:+3622040 | MS.gene072757:CDS |
| TGTTCTTTCGCAGAAAACTC+CGG | 0.581353 | 5.3:-3624978 | None:intergenic |
| TACCTATAGAATATAGGTCA+TGG | 0.588926 | 5.3:+3624871 | MS.gene072757:CDS |
| TGATCCAGCTATGACTCCCA+AGG | 0.589560 | 5.3:-3624089 | None:intergenic |
| TTCGGCAACAGAGTCATGAT+CGG | 0.598041 | 5.3:-3621092 | None:intergenic |
| AAAAGTGCTGACAATTGTGC+TGG | 0.600725 | 5.3:-3623671 | None:intergenic |
| ATCAGATGATGAACAGAAGG+AGG | 0.612938 | 5.3:+3623467 | MS.gene072757:CDS |
| ACTAGATGAGGCATCCAGCA+GGG | 0.613791 | 5.3:-3623433 | None:intergenic |
| TAGGTCATGGAAATCTTCTG+TGG | 0.627776 | 5.3:+3624884 | MS.gene072757:CDS |
| AGGTGGTGAAAGATGAAAAG+TGG | 0.629418 | 5.3:-3620871 | None:intergenic |
| GGAAGAGGATATAAGTGAGG+TGG | 0.632300 | 5.3:-3620888 | None:intergenic |
| AATGGAAGAGGATATAAGTG+AGG | 0.651009 | 5.3:-3620891 | None:intergenic |
| GATCCAGCTATGACTCCCAA+GGG | 0.660586 | 5.3:-3624088 | None:intergenic |
| ATGTTGAAGTGCGAAGAACG+CGG | 0.678767 | 5.3:-3621209 | None:intergenic |
| TCGACTTCAGGTGTACTTCG+GGG | 0.682056 | 5.3:+3623404 | MS.gene072757:intron |
| ATGTTGGTGAATTGAAAGCG+TGG | 0.711543 | 5.3:-3620953 | None:intergenic |
| TGGTGAAAGATGAAAAGTGG+TGG | 0.722848 | 5.3:-3620868 | None:intergenic |
| TTGGTGAATTGAAAGCGTGG+TGG | 0.759701 | 5.3:-3620950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTGAATAATAAAAATAAAT+AGG | - | chr5.3:3622442-3622461 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTGTAATAATAT+TGG | - | chr5.3:3621383-3621402 | None:intergenic | 10.0% |
| !! | AAAATAGAAAATAGAGATAA+AGG | - | chr5.3:3622576-3622595 | None:intergenic | 15.0% |
| !! | ACAATAAAATATAAATCCAA+AGG | - | chr5.3:3622994-3623013 | None:intergenic | 15.0% |
| !! | AGTGAATAGAATTAAAAAAA+TGG | - | chr5.3:3623547-3623566 | None:intergenic | 15.0% |
| !! | ATTATGATAAAACTGTTATA+TGG | - | chr5.3:3622831-3622850 | None:intergenic | 15.0% |
| !! | ATTGTAATTATTAAAGTAAC+AGG | - | chr5.3:3621345-3621364 | None:intergenic | 15.0% |
| !! | GAATTTCATTAAAATAAGTA+TGG | + | chr5.3:3624923-3624942 | MS.gene072757:CDS | 15.0% |
| !! | GTGAATAGAATTAAAAAAAT+GGG | - | chr5.3:3623546-3623565 | None:intergenic | 15.0% |
| !! | TGTAAAAATTAACATGAAAA+GGG | + | chr5.3:3622612-3622631 | MS.gene072757:intron | 15.0% |
| !! | TTGTAAAAATTAACATGAAA+AGG | + | chr5.3:3622611-3622630 | MS.gene072757:intron | 15.0% |
| !! | TTGTAATTATTAAAGTAACA+GGG | - | chr5.3:3621344-3621363 | None:intergenic | 15.0% |
| !!! | AAAAAACTATTTTCTTCAAA+AGG | + | chr5.3:3624845-3624864 | MS.gene072757:intron | 15.0% |
| !!! | ATAATATTTTCTAGAAAACA+TGG | - | chr5.3:3622952-3622971 | None:intergenic | 15.0% |
| !!! | GAAAGATAATTATTTTTTAG+AGG | + | chr5.3:3622394-3622413 | MS.gene072757:intron | 15.0% |
| !!! | TTTTAAAACAGAAAATGTAA+AGG | - | chr5.3:3623360-3623379 | None:intergenic | 15.0% |
| !! | ACAACTTAGAATAATGAAAT+TGG | + | chr5.3:3622225-3622244 | MS.gene072757:intron | 20.0% |
| !! | AGATTCATTAAACAATGTAA+AGG | + | chr5.3:3624778-3624797 | MS.gene072757:intron | 20.0% |
| !! | ATTGATGAGATAAAAATGAA+GGG | + | chr5.3:3621964-3621983 | MS.gene072757:intron | 20.0% |
| !! | GTATATCTCTAAATAACTTT+GGG | + | chr5.3:3624539-3624558 | MS.gene072757:intron | 20.0% |
| !! | GTATTACAAGTTATAAAGAA+TGG | + | chr5.3:3623080-3623099 | MS.gene072757:intron | 20.0% |
| !! | TAAAATATAAATCCAAAGGA+AGG | - | chr5.3:3622990-3623009 | None:intergenic | 20.0% |
| !! | TAAACTTTCCATAATAGTTA+AGG | - | chr5.3:3624470-3624489 | None:intergenic | 20.0% |
| !! | TATTGATGAGATAAAAATGA+AGG | + | chr5.3:3621963-3621982 | MS.gene072757:intron | 20.0% |
| !! | TGTATATCTCTAAATAACTT+TGG | + | chr5.3:3624538-3624557 | MS.gene072757:intron | 20.0% |
| !! | TTGAATTCAATTCCTATATT+TGG | + | chr5.3:3621271-3621290 | MS.gene072757:CDS | 20.0% |
| !!! | AAACACAAATGCAATTTTTT+TGG | - | chr5.3:3623317-3623336 | None:intergenic | 20.0% |
| !!! | AACACAAATGCAATTTTTTT+GGG | - | chr5.3:3623316-3623335 | None:intergenic | 20.0% |
| !!! | AATACAACATCAAATTCTTT+TGG | + | chr5.3:3622848-3622867 | MS.gene072757:intron | 20.0% |
| !!! | ATACAACATCAAATTCTTTT+GGG | + | chr5.3:3622849-3622868 | MS.gene072757:intron | 20.0% |
| !!! | ATGTAATAGTTTGTTTGATA+GGG | - | chr5.3:3623858-3623877 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTTTGATCTTGT+TGG | - | chr5.3:3624417-3624436 | None:intergenic | 20.0% |
| !!! | CGATTTGTAATAGAATTTTA+TGG | - | chr5.3:3623776-3623795 | None:intergenic | 20.0% |
| !!! | CTCTATTTTCTATTTTTGAA+TGG | + | chr5.3:3622580-3622599 | MS.gene072757:intron | 20.0% |
| !!! | GATTTTTTCCATTTCAAAAA+TGG | + | chr5.3:3624704-3624723 | MS.gene072757:intron | 20.0% |
| !!! | TAAAAAAGTACTTGTATATC+TGG | - | chr5.3:3623521-3623540 | None:intergenic | 20.0% |
| !!! | TCAATTAATTTGCTTGTTTT+TGG | + | chr5.3:3622472-3622491 | MS.gene072757:intron | 20.0% |
| !!! | TTTTGTTTTTTGATCTTGTT+GGG | - | chr5.3:3624416-3624435 | None:intergenic | 20.0% |
| !!! | TTTTTGAAATGGAAAAAATC+AGG | - | chr5.3:3624704-3624723 | None:intergenic | 20.0% |
| ! | AACCAAATGCAAAACAATAA+TGG | + | chr5.3:3621879-3621898 | MS.gene072757:intron | 25.0% |
| ! | AATGAAATGAAGTTGAAGAT+AGG | - | chr5.3:3621008-3621027 | None:intergenic | 25.0% |
| ! | AGCAATATAATGAACACTAT+TGG | + | chr5.3:3622753-3622772 | MS.gene072757:intron | 25.0% |
| ! | AGTAATGAGATTTGAACATA+TGG | - | chr5.3:3623285-3623304 | None:intergenic | 25.0% |
| ! | ATCAAACAAACTATTACATG+AGG | + | chr5.3:3623859-3623878 | MS.gene072757:intron | 25.0% |
| ! | ATTGACACATCTTCTAAATA+TGG | + | chr5.3:3624157-3624176 | MS.gene072757:intron | 25.0% |
| ! | CGAAAATGAAAATACATTTG+AGG | - | chr5.3:3621051-3621070 | None:intergenic | 25.0% |
| ! | CTGATCTGAATAATATTCTT+AGG | + | chr5.3:3623052-3623071 | MS.gene072757:intron | 25.0% |
| ! | GATGAAAATAAATCTACATG+AGG | + | chr5.3:3624440-3624459 | MS.gene072757:intron | 25.0% |
| ! | TCAAACAAACTATTACATGA+GGG | + | chr5.3:3623860-3623879 | MS.gene072757:intron | 25.0% |
| ! | TGATAAAACTGTTATATGGT+TGG | - | chr5.3:3622827-3622846 | None:intergenic | 25.0% |
| ! | TTGACACATCTTCTAAATAT+GGG | + | chr5.3:3624158-3624177 | MS.gene072757:intron | 25.0% |
| ! | TTGATGAGATAAAAATGAAG+GGG | + | chr5.3:3621965-3621984 | MS.gene072757:intron | 25.0% |
| !! | ATGTATTTTCATTTTCGCAT+AGG | + | chr5.3:3621054-3621073 | MS.gene072757:intron | 25.0% |
| !! | CAAATTTGGATTTTCCAAAA+TGG | + | chr5.3:3624268-3624287 | MS.gene072757:intron | 25.0% |
| !! | CTGACTTGAATCAATTAATT+TGG | + | chr5.3:3623909-3623928 | MS.gene072757:intron | 25.0% |
| !! | TAGAATGTTTATAAAGCACT+TGG | - | chr5.3:3624319-3624338 | None:intergenic | 25.0% |
| !! | TGTATTTTCATTTTCGCATA+GGG | + | chr5.3:3621055-3621074 | MS.gene072757:intron | 25.0% |
| !! | TTCAATTCACCAACATTTTT+CGG | + | chr5.3:3620960-3620979 | MS.gene072757:CDS | 25.0% |
| !! | TTTCTAGAAAACATGGAATT+TGG | - | chr5.3:3622945-3622964 | None:intergenic | 25.0% |
| !!! | AAATCATTTTTCTCCACAAT+TGG | + | chr5.3:3623724-3623743 | MS.gene072757:CDS | 25.0% |
| !!! | CATGTAATAGTTTGTTTGAT+AGG | - | chr5.3:3623859-3623878 | None:intergenic | 25.0% |
| !!! | TCATTTATTTAGGTCTTGTT+TGG | + | chr5.3:3621423-3621442 | MS.gene072757:intron | 25.0% |
| !!! | TGTTTTGTTCTTTGTTTTGA+AGG | + | chr5.3:3622133-3622152 | MS.gene072757:intron | 25.0% |
| !!! | TTCCATTATTGTTTTGCATT+TGG | - | chr5.3:3621884-3621903 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGATCTTGTTG+GGG | - | chr5.3:3624415-3624434 | None:intergenic | 25.0% |
| AAAATCAGATGATGAACAGA+AGG | + | chr5.3:3623464-3623483 | MS.gene072757:CDS | 30.0% | |
| AATACCCAATTTACGAATTC+TGG | - | chr5.3:3624731-3624750 | None:intergenic | 30.0% | |
| ACAAGACCTAAATAAATGAC+CGG | - | chr5.3:3621422-3621441 | None:intergenic | 30.0% | |
| ACAATATCACTAGACTTCAA+TGG | + | chr5.3:3622281-3622300 | MS.gene072757:intron | 30.0% | |
| ACATCCAACATTATGCTATA+AGG | - | chr5.3:3621468-3621487 | None:intergenic | 30.0% | |
| AGATAAAGGAAAAACCTGAA+CGG | - | chr5.3:3622562-3622581 | None:intergenic | 30.0% | |
| AGGAGGTAATATTTGGTATT+TGG | + | chr5.3:3623484-3623503 | MS.gene072757:intron | 30.0% | |
| AGTAGTATTTCATTACGCTT+CGG | + | chr5.3:3624233-3624252 | MS.gene072757:intron | 30.0% | |
| ATGCTATAAGGGCTTAATTA+AGG | - | chr5.3:3621456-3621475 | None:intergenic | 30.0% | |
| ATTCCTATATTTGGAGATGT+TGG | + | chr5.3:3621280-3621299 | MS.gene072757:CDS | 30.0% | |
| CATCCAACATTATGCTATAA+GGG | - | chr5.3:3621467-3621486 | None:intergenic | 30.0% | |
| GAGGAAAACCTTAACTATTA+TGG | + | chr5.3:3624459-3624478 | MS.gene072757:intron | 30.0% | |
| GCTATCTGCATATAAAAGAA+AGG | - | chr5.3:3624577-3624596 | None:intergenic | 30.0% | |
| GGACTAAGATAGTTTATGTA+AGG | + | chr5.3:3623259-3623278 | MS.gene072757:intron | 30.0% | |
| TACCTATAGAATATAGGTCA+TGG | + | chr5.3:3624871-3624890 | MS.gene072757:CDS | 30.0% | |
| TCAGATCAGATAATCAGATT+AGG | - | chr5.3:3623041-3623060 | None:intergenic | 30.0% | |
| TCAGATGTATTCGAAGAATT+TGG | + | chr5.3:3621939-3621958 | MS.gene072757:intron | 30.0% | |
| TGACACATCTTCTAAATATG+GGG | + | chr5.3:3624159-3624178 | MS.gene072757:intron | 30.0% | |
| TGATGAGATAAAAATGAAGG+GGG | + | chr5.3:3621966-3621985 | MS.gene072757:intron | 30.0% | |
| TTACTTCCGGTCATTTATTT+AGG | + | chr5.3:3621413-3621432 | MS.gene072757:intron | 30.0% | |
| TTCCATGACCTATATTCTAT+AGG | - | chr5.3:3624876-3624895 | None:intergenic | 30.0% | |
| TTCTTTCGAACTCATCTAAT+AGG | + | chr5.3:3623104-3623123 | MS.gene072757:intron | 30.0% | |
| TTGAAGTCTAGTGATATTGT+TGG | - | chr5.3:3622281-3622300 | None:intergenic | 30.0% | |
| TTGCATCAACTTATCAACAA+TGG | - | chr5.3:3622177-3622196 | None:intergenic | 30.0% | |
| ! | AATTGCATTTGTGTTTGCTA+TGG | + | chr5.3:3623321-3623340 | MS.gene072757:intron | 30.0% |
| ! | CTGATATTTTTCTCTGAACT+GGG | + | chr5.3:3621777-3621796 | MS.gene072757:CDS | 30.0% |
| ! | GATTTTTGTTGCACTTTAGT+TGG | - | chr5.3:3624294-3624313 | None:intergenic | 30.0% |
| ! | TCAATTCACCAACATTTTTC+GGG | + | chr5.3:3620961-3620980 | MS.gene072757:CDS | 30.0% |
| ! | TCTGTTCATCATCTGATTTT+TGG | - | chr5.3:3623464-3623483 | None:intergenic | 30.0% |
| ! | TTAAGATTTCAATCGACTTC+AGG | + | chr5.3:3623392-3623411 | MS.gene072757:intron | 30.0% |
| ! | TTAGCAGTTTCTGATTTTTC+TGG | + | chr5.3:3623622-3623641 | MS.gene072757:CDS | 30.0% |
| ! | TTTACTAGGGACATTTTTGT+CGG | + | chr5.3:3624612-3624631 | MS.gene072757:CDS | 30.0% |
| !! | AGTTTGTTTGATAGGGATTT+TGG | - | chr5.3:3623851-3623870 | None:intergenic | 30.0% |
| !! | ATTCTGGTCCATTTTTGAAA+TGG | - | chr5.3:3624715-3624734 | None:intergenic | 30.0% |
| !! | ATTGTTTTATGCTCTATCAC+AGG | + | chr5.3:3621746-3621765 | MS.gene072757:intron | 30.0% |
| !! | TCTAATAGGTTAATTTGCAC+AGG | + | chr5.3:3623118-3623137 | MS.gene072757:intron | 30.0% |
| !! | TTTGGAGCAAGATGTTTTTA+TGG | - | chr5.3:3623833-3623852 | None:intergenic | 30.0% |
| !!! | CTGTTTTAAAATTGAACACG+TGG | + | chr5.3:3623369-3623388 | MS.gene072757:intron | 30.0% |
| !!! | TAATTTGCTTGTTTTTGGCA+GGG | + | chr5.3:3622477-3622496 | MS.gene072757:intron | 30.0% |
| !!! | TTAATTTGCTTGTTTTTGGC+AGG | + | chr5.3:3622476-3622495 | MS.gene072757:intron | 30.0% |
| !!! | TTGTTTTTTGATCTTGTTGG+GGG | - | chr5.3:3624414-3624433 | None:intergenic | 30.0% |
| AAACCACAGTATATCAGGAA+CGG | - | chr5.3:3624667-3624686 | None:intergenic | 35.0% | |
| AAGCCCTTATAGCATAATGT+TGG | + | chr5.3:3621461-3621480 | MS.gene072757:intron | 35.0% | |
| AAGCTATCCTGAAGAGTTTA+CGG | + | chr5.3:3621548-3621567 | MS.gene072757:intron | 35.0% | |
| AATGGAAGAGGATATAAGTG+AGG | - | chr5.3:3620894-3620913 | None:intergenic | 35.0% | |
| ACAGCAGCAATATCATCAAT+AGG | - | chr5.3:3623162-3623181 | None:intergenic | 35.0% | |
| ACCAGAGATAAACATCACAA+GGG | - | chr5.3:3622703-3622722 | None:intergenic | 35.0% | |
| ATGGACCAGAATTCGTAAAT+TGG | + | chr5.3:3624723-3624742 | MS.gene072757:intron | 35.0% | |
| ATGGAGGTGAATTTACCAAT+AGG | - | chr5.3:3623188-3623207 | None:intergenic | 35.0% | |
| CTAACAAACCACAGTATATC+AGG | - | chr5.3:3624672-3624691 | None:intergenic | 35.0% | |
| CTTATTTCCGTAAACTCTTC+AGG | - | chr5.3:3621558-3621577 | None:intergenic | 35.0% | |
| GAACAGAAGGAGGTAATATT+TGG | + | chr5.3:3623477-3623496 | MS.gene072757:intron | 35.0% | |
| GCATTTGTACAAAACTCTTC+AGG | + | chr5.3:3622342-3622361 | MS.gene072757:intron | 35.0% | |
| GGACATATCAAAAGTGAACA+TGG | + | chr5.3:3622730-3622749 | MS.gene072757:intron | 35.0% | |
| GGGAACAACAAGTACAAATT+TGG | + | chr5.3:3624254-3624273 | MS.gene072757:intron | 35.0% | |
| GTACCAAATCTAGGTCATTA+GGG | - | chr5.3:3624392-3624411 | None:intergenic | 35.0% | |
| GTAGTATTTCATTACGCTTC+GGG | + | chr5.3:3624234-3624253 | MS.gene072757:intron | 35.0% | |
| TACCAGAGATAAACATCACA+AGG | - | chr5.3:3622704-3622723 | None:intergenic | 35.0% | |
| TATGTAAACGCGGTAGTATT+AGG | + | chr5.3:3623211-3623230 | MS.gene072757:intron | 35.0% | |
| TCACCAACATCTCCAAATAT+AGG | - | chr5.3:3621286-3621305 | None:intergenic | 35.0% | |
| TCTTCTGATGATACTGATGA+TGG | + | chr5.3:3621154-3621173 | MS.gene072757:CDS | 35.0% | |
| TGAAACTGCTTAAAGAGTTC+CGG | + | chr5.3:3624353-3624372 | MS.gene072757:intron | 35.0% | |
| TGAGTGTTTGATGTTTATGC+AGG | + | chr5.3:3622012-3622031 | MS.gene072757:intron | 35.0% | |
| TGGACCAGAATTCGTAAATT+GGG | + | chr5.3:3624724-3624743 | MS.gene072757:intron | 35.0% | |
| TGTTTATCTCTGGTATGCAT+TGG | + | chr5.3:3622709-3622728 | MS.gene072757:intron | 35.0% | |
| TTTACTTCTACTCCTTCCTT+TGG | + | chr5.3:3622975-3622994 | MS.gene072757:intron | 35.0% | |
| ! | AATGTCAACTCTGTTACTTC+CGG | + | chr5.3:3621400-3621419 | MS.gene072757:intron | 35.0% |
| ! | AATTTGAGATTGCAGAGAAG+AGG | - | chr5.3:3620929-3620948 | None:intergenic | 35.0% |
| ! | AGGTGCTACCTATAGAATAT+AGG | + | chr5.3:3624865-3624884 | MS.gene072757:intron | 35.0% |
| ! | CTGTTATATGGTTGGTCAAA+AGG | - | chr5.3:3622819-3622838 | None:intergenic | 35.0% |
| ! | GCATTGAGAATCGGTATTTT+CGG | - | chr5.3:3621113-3621132 | None:intergenic | 35.0% |
| ! | GCTGATATTTTTCTCTGAAC+TGG | + | chr5.3:3621776-3621795 | MS.gene072757:CDS | 35.0% |
| ! | TCTGTGGATAATTTTCTGCA+CGG | + | chr5.3:3624900-3624919 | MS.gene072757:CDS | 35.0% |
| ! | TGACGATGTTTTCTATGCAA+TGG | + | chr5.3:3623577-3623596 | MS.gene072757:intron | 35.0% |
| !! | CTTAGTTTTTGTTGCTGAGT+GGG | + | chr5.3:3623696-3623715 | MS.gene072757:CDS | 35.0% |
| !! | GTTGTTTTCATTGGGACATT+TGG | + | chr5.3:3622064-3622083 | MS.gene072757:CDS | 35.0% |
| !! | GTTTCTGATTTTTCTGGAGA+CGG | + | chr5.3:3623628-3623647 | MS.gene072757:CDS | 35.0% |
| !! | TAGGTTAATTTGCACAGGTT+TGG | + | chr5.3:3623123-3623142 | MS.gene072757:intron | 35.0% |
| !! | TCTTAGTTTTTGTTGCTGAG+TGG | + | chr5.3:3623695-3623714 | MS.gene072757:CDS | 35.0% |
| !! | TTAGTTTTTGTTGCTGAGTG+GGG | + | chr5.3:3623697-3623716 | MS.gene072757:CDS | 35.0% |
| !!! | AGACTGTTTTGGAGAACTTA+TGG | - | chr5.3:3621616-3621635 | None:intergenic | 35.0% |
| !!! | TTTTTGGCTATCACTAGATG+AGG | - | chr5.3:3623448-3623467 | None:intergenic | 35.0% |
| ACACATTCTGTGTTGCCAAT+TGG | - | chr5.3:3621135-3621154 | None:intergenic | 40.0% | |
| ACCCTTGTGATGTTTATCTC+TGG | + | chr5.3:3622699-3622718 | MS.gene072757:intron | 40.0% | |
| AGGTGGTGAAAGATGAAAAG+TGG | - | chr5.3:3620874-3620893 | None:intergenic | 40.0% | |
| ATCAGATGATGAACAGAAGG+AGG | + | chr5.3:3623467-3623486 | MS.gene072757:CDS | 40.0% | |
| ATGAAGTTGAAGATAGGTGC+AGG | - | chr5.3:3621002-3621021 | None:intergenic | 40.0% | |
| ATGCAACAGTTTCGACATCA+AGG | - | chr5.3:3621670-3621689 | None:intergenic | 40.0% | |
| CAATGGTTCCTACATTAACC+AGG | + | chr5.3:3623594-3623613 | MS.gene072757:intron | 40.0% | |
| CAGGCTTATATTGTGTCTAG+AGG | + | chr5.3:3622361-3622380 | MS.gene072757:intron | 40.0% | |
| CCTCCATGTTTATGTAAACG+CGG | + | chr5.3:3623201-3623220 | MS.gene072757:intron | 40.0% | |
| CGCACTTCAACATACTTATC+CGG | + | chr5.3:3621219-3621238 | MS.gene072757:CDS | 40.0% | |
| CTACCGCGTTTACATAAACA+TGG | - | chr5.3:3623207-3623226 | None:intergenic | 40.0% | |
| CTTCCCTAATGACCTAGATT+TGG | + | chr5.3:3624386-3624405 | MS.gene072757:intron | 40.0% | |
| GAAAAGTGGTGGCTCTTAAA+TGG | - | chr5.3:3620860-3620879 | None:intergenic | 40.0% | |
| GGTACCAAATCTAGGTCATT+AGG | - | chr5.3:3624393-3624412 | None:intergenic | 40.0% | |
| TAACTCTGCCTGGTTAATGT+AGG | - | chr5.3:3623605-3623624 | None:intergenic | 40.0% | |
| TAGGTCATGGAAATCTTCTG+TGG | + | chr5.3:3624884-3624903 | MS.gene072757:CDS | 40.0% | |
| TAGTAAAGAGCCACCAAGTA+CGG | - | chr5.3:3624599-3624618 | None:intergenic | 40.0% | |
| TATATGCAGATAGCCGTACT+TGG | + | chr5.3:3624583-3624602 | MS.gene072757:intron | 40.0% | |
| TCGAATACATCTGAACAGAG+AGG | - | chr5.3:3621933-3621952 | None:intergenic | 40.0% | |
| TGATGCAATGCAAGCAATTG+TGG | + | chr5.3:3622189-3622208 | MS.gene072757:intron | 40.0% | |
| TGGTGAAAGATGAAAAGTGG+TGG | - | chr5.3:3620871-3620890 | None:intergenic | 40.0% | |
| TGTTCTTTCGCAGAAAACTC+CGG | - | chr5.3:3624981-3625000 | None:intergenic | 40.0% | |
| TTAGCAGCTAGAAATTCAGC+TGG | + | chr5.3:3622040-3622059 | MS.gene072757:CDS | 40.0% | |
| ! | AATCGACTTCAGGTGTACTT+CGG | + | chr5.3:3623402-3623421 | MS.gene072757:intron | 40.0% |
| ! | ATGTTGGTGAATTGAAAGCG+TGG | - | chr5.3:3620956-3620975 | None:intergenic | 40.0% |
| ! | CAACACTAGTGAGACTGTTT+TGG | - | chr5.3:3621627-3621646 | None:intergenic | 40.0% |
| ! | CTGTGGATAATTTTCTGCAC+GGG | + | chr5.3:3624901-3624920 | MS.gene072757:CDS | 40.0% |
| ! | TACTTGGTGGCTCTTTACTA+GGG | + | chr5.3:3624599-3624618 | MS.gene072757:CDS | 40.0% |
| ! | TATTGCTGCTGTTTGCCTAT+TGG | + | chr5.3:3623170-3623189 | MS.gene072757:CDS | 40.0% |
| ! | TGCACTTTAGTTGGCCATTT+TGG | - | chr5.3:3624285-3624304 | None:intergenic | 40.0% |
| ! | TGCCAATTGGCATTGAGAAT+CGG | - | chr5.3:3621122-3621141 | None:intergenic | 40.0% |
| ! | TGGTGGCTCTTAAATGGTTT+TGG | - | chr5.3:3620854-3620873 | None:intergenic | 40.0% |
| !! | AAAAGTGCTGACAATTGTGC+TGG | - | chr5.3:3623674-3623693 | None:intergenic | 40.0% |
| !! | TACCGATTCTCAATGCCAAT+TGG | + | chr5.3:3621117-3621136 | MS.gene072757:CDS | 40.0% |
| !!! | CAACATTTTTCGGGCTACAA+CGG | + | chr5.3:3620970-3620989 | MS.gene072757:CDS | 40.0% |
| !!! | CAGCTGGTGTTGTTTTCATT+GGG | + | chr5.3:3622056-3622075 | MS.gene072757:CDS | 40.0% |
| !!! | TCAGCTGGTGTTGTTTTCAT+TGG | + | chr5.3:3622055-3622074 | MS.gene072757:CDS | 40.0% |
| AAAAATGAAGGGGGAAGCTC+TGG | + | chr5.3:3621975-3621994 | MS.gene072757:intron | 45.0% | |
| AAATCAGAAGCAGCAACTGC+CGG | - | chr5.3:3621241-3621260 | None:intergenic | 45.0% | |
| AAGAGGAGGAGGAGGAAAAA+TGG | - | chr5.3:3620912-3620931 | None:intergenic | 45.0% | |
| AATGCTCTACCACTGAGCTA+TGG | + | chr5.3:3622676-3622695 | MS.gene072757:intron | 45.0% | |
| ACTGTCATATCTGTCGCTCT+AGG | + | chr5.3:3622505-3622524 | MS.gene072757:CDS | 45.0% | |
| ACTTCAGCACTCACCAATTG+TGG | - | chr5.3:3623740-3623759 | None:intergenic | 45.0% | |
| AGGAGGAGGAAAAATGGAAG+AGG | - | chr5.3:3620906-3620925 | None:intergenic | 45.0% | |
| ATGTTGAAGTGCGAAGAACG+CGG | - | chr5.3:3621212-3621231 | None:intergenic | 45.0% | |
| CATCCGTTCCTGATATACTG+TGG | + | chr5.3:3624661-3624680 | MS.gene072757:intron | 45.0% | |
| CCGCGTTTACATAAACATGG+AGG | - | chr5.3:3623204-3623223 | None:intergenic | 45.0% | |
| CGTTGTAGCCCGAAAAATGT+TGG | - | chr5.3:3620972-3620991 | None:intergenic | 45.0% | |
| GCATTTGACTGCAGATCAAG+AGG | - | chr5.3:3622661-3622680 | None:intergenic | 45.0% | |
| GGAAGAGGATATAAGTGAGG+TGG | - | chr5.3:3620891-3620910 | None:intergenic | 45.0% | |
| TAACATGAAAAGGGCCCAAC+CGG | + | chr5.3:3622621-3622640 | MS.gene072757:intron | 45.0% | |
| TAGGATTGAGCTAGTGGTGA+AGG | + | chr5.3:3623238-3623257 | MS.gene072757:intron | 45.0% | |
| TCGGAGAAGGTAACTTCTTC+TGG | + | chr5.3:3624631-3624650 | MS.gene072757:intron | 45.0% | |
| TGCAAGGGCTAAATAGTAGG+AGG | - | chr5.3:3624056-3624075 | None:intergenic | 45.0% | |
| TGCTGCAAGGGCTAAATAGT+AGG | - | chr5.3:3624059-3624078 | None:intergenic | 45.0% | |
| TTAGGGAAGAGATAGCTCAC+CGG | - | chr5.3:3624375-3624394 | None:intergenic | 45.0% | |
| TTCGGCAACAGAGTCATGAT+CGG | - | chr5.3:3621095-3621114 | None:intergenic | 45.0% | |
| TTGAGATTGCAGAGAAGAGG+AGG | - | chr5.3:3620926-3620945 | None:intergenic | 45.0% | |
| ! | AGGGACATTTTTGTCGGAGA+AGG | + | chr5.3:3624618-3624637 | MS.gene072757:CDS | 45.0% |
| ! | ATCGACTTCAGGTGTACTTC+GGG | + | chr5.3:3623403-3623422 | MS.gene072757:intron | 45.0% |
| ! | GCACAGGTTTTGCTTCAGTT+AGG | + | chr5.3:3621311-3621330 | MS.gene072757:intron | 45.0% |
| ! | GCTGCTTCTGATTTTGCTAC+TGG | + | chr5.3:3621247-3621266 | MS.gene072757:CDS | 45.0% |
| ! | GTACTTGGTGGCTCTTTACT+AGG | + | chr5.3:3624598-3624617 | MS.gene072757:CDS | 45.0% |
| ! | TTGGTGAATTGAAAGCGTGG+TGG | - | chr5.3:3620953-3620972 | None:intergenic | 45.0% |
| !! | ATTTTTCTGGAGACGGTGCT+GGG | + | chr5.3:3623635-3623654 | MS.gene072757:CDS | 45.0% |
| !! | GATGTTGGTGACTTAAGCAC+AGG | + | chr5.3:3621295-3621314 | MS.gene072757:CDS | 45.0% |
| !! | TGGTCATGGTGTTGCAACTT+TGG | + | chr5.3:3624117-3624136 | MS.gene072757:CDS | 45.0% |
| !! | TTGTTGGGGGTACCAAATCT+AGG | - | chr5.3:3624401-3624420 | None:intergenic | 45.0% |
| AACATGAAAAGGGCCCAACC+GGG | + | chr5.3:3622622-3622641 | MS.gene072757:intron | 50.0% | |
| ACTGCAGATCAAGAGGTCAC+CGG | - | chr5.3:3622654-3622673 | None:intergenic | 50.0% | |
| AGATTGCAGAGAAGAGGAGG+AGG | - | chr5.3:3620923-3620942 | None:intergenic | 50.0% | |
| ATGCAGATAGCCGTACTTGG+TGG | + | chr5.3:3624586-3624605 | MS.gene072757:intron | 50.0% | |
| CAGAAACTGCTAACTCTGCC+TGG | - | chr5.3:3623615-3623634 | None:intergenic | 50.0% | |
| CGCGGTAGTATTAGGTCACT+AGG | + | chr5.3:3623219-3623238 | MS.gene072757:intron | 50.0% | |
| GATCCAGCTATGACTCCCAA+GGG | - | chr5.3:3624091-3624110 | None:intergenic | 50.0% | |
| GCGCAACATGTTAGATGCTC+CGG | + | chr5.3:3624959-3624978 | MS.gene072757:CDS | 50.0% | |
| GGTCACTAGGATTGAGCTAG+TGG | + | chr5.3:3623232-3623251 | MS.gene072757:intron | 50.0% | |
| TCGACTTCAGGTGTACTTCG+GGG | + | chr5.3:3623404-3623423 | MS.gene072757:intron | 50.0% | |
| TGATCCAGCTATGACTCCCA+AGG | - | chr5.3:3624092-3624111 | None:intergenic | 50.0% | |
| TTGACGAACTCTTGCCGTTC+AGG | + | chr5.3:3622545-3622564 | MS.gene072757:CDS | 50.0% | |
| ! | ACTAGATGAGGCATCCAGCA+GGG | - | chr5.3:3623436-3623455 | None:intergenic | 50.0% |
| !! | GATTTTTCTGGAGACGGTGC+TGG | + | chr5.3:3623634-3623653 | MS.gene072757:CDS | 50.0% |
| AGGGTGAAGAAGCTGCTGCA+AGG | - | chr5.3:3624072-3624091 | None:intergenic | 55.0% | |
| CACAAGGGTCCATAGCTCAG+TGG | - | chr5.3:3622688-3622707 | None:intergenic | 55.0% | |
| GCAGCAGCTTCTTCACCCTT+GGG | + | chr5.3:3624073-3624092 | MS.gene072757:CDS | 55.0% | |
| GGGAGTCATAGCTGGATCAC+TGG | + | chr5.3:3624093-3624112 | MS.gene072757:CDS | 55.0% | |
| GGGTGAAGAAGCTGCTGCAA+GGG | - | chr5.3:3624071-3624090 | None:intergenic | 55.0% | |
| GTCATAGCTGGATCACTGGC+TGG | + | chr5.3:3624097-3624116 | MS.gene072757:CDS | 55.0% | |
| TCACCCTTGGGAGTCATAGC+TGG | + | chr5.3:3624085-3624104 | MS.gene072757:CDS | 55.0% | |
| TGCAGCAGCTTCTTCACCCT+TGG | + | chr5.3:3624072-3624091 | MS.gene072757:CDS | 55.0% | |
| TTGCAGAGAAGAGGAGGAGG+AGG | - | chr5.3:3620920-3620939 | None:intergenic | 55.0% | |
| ! | CACTAGATGAGGCATCCAGC+AGG | - | chr5.3:3623437-3623456 | None:intergenic | 55.0% |
| ! | GCTGGATCACTGGCTGGTCA+TGG | + | chr5.3:3624103-3624122 | MS.gene072757:CDS | 60.0% |
| !! | AGAGGTCACCGGTTCGAACC+CGG | - | chr5.3:3622643-3622662 | None:intergenic | 60.0% |
| !! | TCACCGGTTCGAACCCGGTT+GGG | - | chr5.3:3622638-3622657 | None:intergenic | 60.0% |
| CTTCGGGGTCTCTACCCTGC+TGG | + | chr5.3:3623419-3623438 | MS.gene072757:CDS | 65.0% | |
| !! | GTCACCGGTTCGAACCCGGT+TGG | - | chr5.3:3622639-3622658 | None:intergenic | 65.0% |
| GGGCCCAACCGGGTTCGAAC+CGG | + | chr5.3:3622632-3622651 | MS.gene072757:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3620812 | 3625019 | 3620812 | ID=MS.gene072757 |
| chr5.3 | mRNA | 3620812 | 3625019 | 3620812 | ID=MS.gene072757.t1;Parent=MS.gene072757 |
| chr5.3 | exon | 3620812 | 3620991 | 3620812 | ID=MS.gene072757.t1.exon1;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3620812 | 3620991 | 3620812 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3621076 | 3621327 | 3621076 | ID=MS.gene072757.t1.exon2;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3621076 | 3621327 | 3621076 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3621768 | 3621821 | 3621768 | ID=MS.gene072757.t1.exon3;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3621768 | 3621821 | 3621768 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3622034 | 3622095 | 3622034 | ID=MS.gene072757.t1.exon4;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3622034 | 3622095 | 3622034 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3622498 | 3622566 | 3622498 | ID=MS.gene072757.t1.exon5;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3622498 | 3622566 | 3622498 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3623140 | 3623191 | 3623140 | ID=MS.gene072757.t1.exon6;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3623140 | 3623191 | 3623140 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3623414 | 3623488 | 3623414 | ID=MS.gene072757.t1.exon7;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3623414 | 3623488 | 3623414 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3623616 | 3623745 | 3623616 | ID=MS.gene072757.t1.exon8;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3623616 | 3623745 | 3623616 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3624068 | 3624138 | 3624068 | ID=MS.gene072757.t1.exon9;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3624068 | 3624138 | 3624068 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3624592 | 3624639 | 3624592 | ID=MS.gene072757.t1.exon10;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3624592 | 3624639 | 3624592 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| chr5.3 | exon | 3624867 | 3625019 | 3624867 | ID=MS.gene072757.t1.exon11;Parent=MS.gene072757.t1 |
| chr5.3 | CDS | 3624867 | 3625019 | 3624867 | ID=cds.MS.gene072757.t1;Parent=MS.gene072757.t1 |
| Gene Sequence |
| Protein sequence |
