Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21530.t1 | XP_003611376.1 | 88.5 | 234 | 19 | 3 | 1 | 231 | 1 | 229 | 9.40E-91 | 343.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21530.t1 | P82413 | 77.5 | 138 | 30 | 1 | 95 | 231 | 96 | 233 | 2.1e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21530.t1 | B7FKU8 | 88.5 | 234 | 19 | 3 | 1 | 231 | 1 | 229 | 6.8e-91 | 343.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene21530 | 0.847768 | 9.38E-60 | -1.69E-46 |
| MS.gene049171 | MS.gene21530 | 0.817495 | 3.20E-52 | -1.69E-46 |
| MS.gene049173 | MS.gene21530 | 0.811769 | 5.93E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene21530 | 0.860369 | 2.17E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene21530 | 0.834732 | 2.53E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene21530 | 0.848484 | 5.95E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene21530 | 0.822013 | 2.97E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene21530 | 0.848757 | 5.00E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene21530 | 0.89549 | 9.12E-76 | -1.69E-46 |
| MS.gene049491 | MS.gene21530 | 0.855979 | 4.38E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene21530 | 0.840011 | 1.12E-57 | -1.69E-46 |
| MS.gene049614 | MS.gene21530 | 0.878713 | 2.25E-69 | -1.69E-46 |
| MS.gene049661 | MS.gene21530 | 0.842566 | 2.39E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene21530 | 0.830304 | 3.17E-55 | -1.69E-46 |
| MS.gene049760 | MS.gene21530 | 0.863265 | 2.82E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene21530 | 0.891699 | 3.13E-74 | -1.69E-46 |
| MS.gene050076 | MS.gene21530 | 0.88882 | 4.20E-73 | -1.69E-46 |
| MS.gene050163 | MS.gene21530 | 0.881991 | 1.51E-70 | -1.69E-46 |
| MS.gene050165 | MS.gene21530 | 0.842521 | 2.46E-58 | -1.69E-46 |
| MS.gene050301 | MS.gene21530 | 0.857475 | 1.59E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene21530 | 0.836913 | 7.08E-57 | -1.69E-46 |
| MS.gene050432 | MS.gene21530 | 0.865575 | 5.35E-65 | -1.69E-46 |
| MS.gene050475 | MS.gene21530 | -0.845332 | 4.34E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene21530 | 0.807091 | 5.99E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene21530 | 0.818754 | 1.66E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene21530 | 0.808613 | 2.84E-50 | -1.69E-46 |
| MS.gene05053 | MS.gene21530 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene050541 | MS.gene21530 | -0.841 | 6.20E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene21530 | 0.851122 | 1.09E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene21530 | 0.843496 | 1.35E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene21530 | 0.806989 | 6.29E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene21530 | 0.816919 | 4.31E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene21530 | 0.840446 | 8.65E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene21530 | 0.915397 | 6.18E-85 | -1.69E-46 |
| MS.gene050770 | MS.gene21530 | 0.917932 | 2.90E-86 | -1.69E-46 |
| MS.gene050772 | MS.gene21530 | 0.855715 | 5.24E-62 | -1.69E-46 |
| MS.gene050783 | MS.gene21530 | 0.853739 | 1.96E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene21530 | 0.820129 | 8.07E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene21530 | 0.835584 | 1.54E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene21530 | 0.854584 | 1.12E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene21530 | 0.908957 | 9.68E-82 | -1.69E-46 |
| MS.gene05105 | MS.gene21530 | 0.852543 | 4.31E-61 | -1.69E-46 |
| MS.gene051228 | MS.gene21530 | 0.848715 | 5.14E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene21530 | 0.878706 | 2.26E-69 | -1.69E-46 |
| MS.gene051471 | MS.gene21530 | 0.855338 | 6.75E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene21530 | 0.82467 | 7.12E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene21530 | 0.866917 | 2.01E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene21530 | 0.826255 | 3.00E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene21530 | 0.839218 | 1.81E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene21530 | 0.837364 | 5.43E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene21530 | 0.832269 | 1.04E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene21530 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene21530 | 0.859999 | 2.80E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene21530 | 0.827264 | 1.72E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene21530 | 0.892059 | 2.25E-74 | -1.69E-46 |
| MS.gene052290 | MS.gene21530 | 0.885304 | 9.12E-72 | -1.69E-46 |
| MS.gene052293 | MS.gene21530 | 0.826104 | 3.26E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene21530 | 0.869758 | 2.44E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene21530 | 0.8347 | 2.57E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene21530 | 0.871642 | 5.85E-67 | -1.69E-46 |
| MS.gene052340 | MS.gene21530 | 0.801038 | 1.09E-48 | -1.69E-46 |
| MS.gene052379 | MS.gene21530 | 0.884366 | 2.04E-71 | -1.69E-46 |
| MS.gene052421 | MS.gene21530 | 0.869421 | 3.14E-66 | -1.69E-46 |
| MS.gene052481 | MS.gene21530 | 0.831729 | 1.42E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene21530 | 0.849403 | 3.31E-60 | -1.69E-46 |
| MS.gene052485 | MS.gene21530 | 0.831852 | 1.32E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene21530 | 0.866646 | 2.45E-65 | -1.69E-46 |
| MS.gene052670 | MS.gene21530 | 0.812659 | 3.79E-51 | -1.69E-46 |
| MS.gene053009 | MS.gene21530 | 0.894548 | 2.22E-75 | -1.69E-46 |
| MS.gene053103 | MS.gene21530 | 0.881737 | 1.87E-70 | -1.69E-46 |
| MS.gene053104 | MS.gene21530 | 0.856218 | 3.73E-62 | -1.69E-46 |
| MS.gene053107 | MS.gene21530 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene21530 | 0.861762 | 8.17E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene21530 | 0.840228 | 9.87E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene21530 | 0.865611 | 5.21E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene21530 | 0.854259 | 1.39E-61 | -1.69E-46 |
| MS.gene053322 | MS.gene21530 | 0.944806 | 9.90E-104 | -1.69E-46 |
| MS.gene053384 | MS.gene21530 | 0.803894 | 2.80E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene21530 | 0.814763 | 1.31E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene21530 | 0.817031 | 4.07E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene21530 | 0.872812 | 2.38E-67 | -1.69E-46 |
| MS.gene053813 | MS.gene21530 | 0.838659 | 2.52E-57 | -1.69E-46 |
| MS.gene053915 | MS.gene21530 | 0.820253 | 7.56E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene21530 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene21530 | 0.853452 | 2.37E-61 | -1.69E-46 |
| MS.gene054376 | MS.gene21530 | 0.912307 | 2.26E-83 | -1.69E-46 |
| MS.gene054408 | MS.gene21530 | 0.814126 | 1.81E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene21530 | 0.818245 | 2.17E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene21530 | 0.811013 | 8.66E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene21530 | 0.82967 | 4.52E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene21530 | 0.862649 | 4.37E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene21530 | 0.900261 | 8.74E-78 | -1.69E-46 |
| MS.gene054803 | MS.gene21530 | 0.899643 | 1.62E-77 | -1.69E-46 |
| MS.gene054804 | MS.gene21530 | 0.903592 | 2.96E-79 | -1.69E-46 |
| MS.gene054927 | MS.gene21530 | 0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene21530 | 0.80591 | 1.06E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene21530 | 0.855977 | 4.39E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene21530 | 0.821288 | 4.37E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene21530 | 0.838849 | 2.25E-57 | -1.69E-46 |
| MS.gene055254 | MS.gene21530 | 0.864282 | 1.36E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene21530 | 0.854235 | 1.41E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene21530 | 0.816821 | 4.54E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene21530 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene21530 | 0.905179 | 5.64E-80 | -1.69E-46 |
| MS.gene055412 | MS.gene21530 | 0.898709 | 4.07E-77 | -1.69E-46 |
| MS.gene055422 | MS.gene21530 | 0.840347 | 9.18E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene21530 | 0.825862 | 3.72E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene21530 | 0.927147 | 1.76E-91 | -1.69E-46 |
| MS.gene055502 | MS.gene21530 | 0.833394 | 5.47E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene21530 | 0.838807 | 2.31E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene21530 | 0.816097 | 6.59E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene21530 | 0.90498 | 6.95E-80 | -1.69E-46 |
| MS.gene055722 | MS.gene21530 | 0.85269 | 3.91E-61 | -1.69E-46 |
| MS.gene055896 | MS.gene21530 | 0.823392 | 1.42E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene21530 | 0.882524 | 9.70E-71 | -1.69E-46 |
| MS.gene055930 | MS.gene21530 | 0.803491 | 3.40E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene21530 | 0.834521 | 2.86E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene21530 | 0.87431 | 7.46E-68 | -1.69E-46 |
| MS.gene056191 | MS.gene21530 | 0.819066 | 1.41E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene21530 | 0.865213 | 6.95E-65 | -1.69E-46 |
| MS.gene056407 | MS.gene21530 | 0.845181 | 4.77E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene21530 | 0.834998 | 2.17E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene21530 | 0.804566 | 2.03E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene21530 | 0.801537 | 8.59E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene21530 | 0.865016 | 8.01E-65 | -1.69E-46 |
| MS.gene056612 | MS.gene21530 | 0.808489 | 3.02E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene21530 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene21530 | 0.815801 | 7.67E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene21530 | 0.839985 | 1.14E-57 | -1.69E-46 |
| MS.gene056931 | MS.gene21530 | 0.800796 | 1.22E-48 | -1.69E-46 |
| MS.gene056935 | MS.gene21530 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene21530 | 0.917265 | 6.56E-86 | -1.69E-46 |
| MS.gene05702 | MS.gene21530 | 0.809559 | 1.78E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene21530 | 0.881199 | 2.93E-70 | -1.69E-46 |
| MS.gene057124 | MS.gene21530 | 0.811623 | 6.38E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene21530 | 0.927719 | 7.94E-92 | -1.69E-46 |
| MS.gene057146 | MS.gene21530 | 0.900737 | 5.43E-78 | -1.69E-46 |
| MS.gene057285 | MS.gene21530 | 0.82303 | 1.72E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene21530 | 0.861572 | 9.34E-64 | -1.69E-46 |
| MS.gene057331 | MS.gene21530 | 0.843639 | 1.24E-58 | -1.69E-46 |
| MS.gene05733 | MS.gene21530 | 0.807416 | 5.11E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene21530 | 0.826162 | 3.16E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene21530 | 0.907842 | 3.27E-81 | -1.69E-46 |
| MS.gene057478 | MS.gene21530 | -0.803415 | 3.52E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene21530 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene21530 | 0.881113 | 3.14E-70 | -1.69E-46 |
| MS.gene058082 | MS.gene21530 | 0.819133 | 1.36E-52 | -1.69E-46 |
| MS.gene058130 | MS.gene21530 | 0.80947 | 1.86E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene21530 | 0.839379 | 1.64E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene21530 | 0.907524 | 4.62E-81 | -1.69E-46 |
| MS.gene058323 | MS.gene21530 | 0.849602 | 2.91E-60 | -1.69E-46 |
| MS.gene058365 | MS.gene21530 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene21530 | 0.848946 | 4.43E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene21530 | 0.827071 | 1.92E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene21530 | 0.916007 | 2.99E-85 | -1.69E-46 |
| MS.gene058723 | MS.gene21530 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene21530 | 0.819213 | 1.31E-52 | -1.69E-46 |
| MS.gene058787 | MS.gene21530 | 0.815768 | 7.80E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene21530 | 0.839006 | 2.05E-57 | -1.69E-46 |
| MS.gene058903 | MS.gene21530 | 0.814262 | 1.68E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene21530 | 0.808899 | 2.47E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene21530 | 0.836828 | 7.45E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene21530 | 0.800753 | 1.24E-48 | -1.69E-46 |
| MS.gene059029 | MS.gene21530 | 0.873999 | 9.51E-68 | -1.69E-46 |
| MS.gene05907 | MS.gene21530 | 0.814917 | 1.21E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene21530 | 0.843379 | 1.45E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene21530 | 0.832496 | 9.15E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene21530 | 0.913341 | 6.88E-84 | -1.69E-46 |
| MS.gene059597 | MS.gene21530 | 0.861597 | 9.17E-64 | -1.69E-46 |
| MS.gene05959 | MS.gene21530 | 0.823602 | 1.27E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene21530 | 0.880368 | 5.81E-70 | -1.69E-46 |
| MS.gene059677 | MS.gene21530 | 0.83585 | 1.32E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene21530 | 0.886512 | 3.21E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene21530 | 0.882486 | 1.00E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene21530 | 0.886825 | 2.44E-72 | -1.69E-46 |
| MS.gene059711 | MS.gene21530 | 0.844358 | 7.95E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene21530 | 0.853094 | 3.00E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene21530 | 0.808333 | 3.26E-50 | -1.69E-46 |
| MS.gene059858 | MS.gene21530 | 0.812794 | 3.54E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene21530 | 0.824325 | 8.58E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene21530 | 0.833407 | 5.43E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene21530 | 0.937711 | 2.22E-98 | -1.69E-46 |
| MS.gene060005 | MS.gene21530 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene060193 | MS.gene21530 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene060356 | MS.gene21530 | 0.844968 | 5.44E-59 | -1.69E-46 |
| MS.gene060403 | MS.gene21530 | 0.823382 | 1.43E-53 | -1.69E-46 |
| MS.gene060675 | MS.gene21530 | 0.810518 | 1.11E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene21530 | 0.86491 | 8.65E-65 | -1.69E-46 |
| MS.gene060818 | MS.gene21530 | 0.870829 | 1.09E-66 | -1.69E-46 |
| MS.gene060837 | MS.gene21530 | 0.820632 | 6.19E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene21530 | 0.854197 | 1.45E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene21530 | 0.837946 | 3.85E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene21530 | 0.814248 | 1.70E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene21530 | -0.836373 | 9.72E-57 | -1.69E-46 |
| MS.gene061134 | MS.gene21530 | 0.814858 | 1.24E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene21530 | 0.874562 | 6.13E-68 | -1.69E-46 |
| MS.gene061171 | MS.gene21530 | 0.844385 | 7.81E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene21530 | 0.934774 | 2.40E-96 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21530.t1 | MTR_5g013300 | 88.034 | 234 | 20 | 3 | 1 | 231 | 1 | 229 | 3.81e-147 | 409 |
| MS.gene21530.t1 | MTR_3g058620 | 49.640 | 139 | 66 | 1 | 90 | 224 | 77 | 215 | 6.93e-40 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21530.t1 | AT4G17560 | 58.824 | 221 | 60 | 6 | 21 | 231 | 26 | 225 | 2.43e-70 | 215 |
| MS.gene21530.t1 | AT5G47190 | 58.333 | 216 | 69 | 3 | 31 | 231 | 20 | 229 | 9.03e-69 | 211 |
| MS.gene21530.t1 | AT4G11630 | 54.286 | 105 | 48 | 0 | 120 | 224 | 115 | 219 | 1.45e-37 | 131 |
| MS.gene21530.t1 | AT5G11750 | 54.286 | 105 | 48 | 0 | 120 | 224 | 119 | 223 | 2.23e-37 | 130 |
| MS.gene21530.t1 | AT5G11750 | 52.830 | 106 | 50 | 0 | 119 | 224 | 142 | 247 | 2.51e-36 | 129 |
| MS.gene21530.t1 | AT1G24240 | 52.381 | 105 | 50 | 0 | 120 | 224 | 112 | 216 | 2.14e-29 | 110 |
Find 70 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGACAATACCTTTATAAA+TGG | 0.225579 | 5.3:-6248943 | None:intergenic |
| CTTCTTCGACCTCAATTTCA+TGG | 0.303030 | 5.3:+6247494 | MS.gene21530:CDS |
| AACTGAAGGAGAACAGGTTT+TGG | 0.311686 | 5.3:+6247639 | MS.gene21530:CDS |
| GTCCTACTTGCAGGAAGTTC+CGG | 0.324320 | 5.3:+6248902 | MS.gene21530:intron |
| GGCTTCCCAAGTATTTCTTC+AGG | 0.325939 | 5.3:+6247251 | MS.gene21530:CDS |
| GTAACTTACCCTTCATTTCC+AGG | 0.329154 | 5.3:+6247470 | MS.gene21530:CDS |
| TGTTAAGCTTGGTGATGTTA+TGG | 0.331706 | 5.3:+6247708 | MS.gene21530:CDS |
| TCATTTGAAAGTGGAGAATC+TGG | 0.340991 | 5.3:-6249966 | None:intergenic |
| CGTAGGTTATCCATTTATAA+AGG | 0.341243 | 5.3:+6248933 | MS.gene21530:CDS |
| ATTTGAAACAGCCTCGGAAT+TGG | 0.345574 | 5.3:-6247569 | None:intergenic |
| GTCTTGCCTGCCTGACCTTT+CGG | 0.348430 | 5.3:-6249919 | None:intergenic |
| ACTTTGATTTCTTTGATGTT+TGG | 0.358077 | 5.3:-6249887 | None:intergenic |
| GAAGAGAAACCTAGCTTTGT+TGG | 0.359069 | 5.3:-6247418 | None:intergenic |
| GTTAAGCTTGGTGATGTTAT+GGG | 0.359187 | 5.3:+6247709 | MS.gene21530:CDS |
| TCAGCATTATCCGAAGCTTC+AGG | 0.367212 | 5.3:-6247604 | None:intergenic |
| TTTGTTGGAGGACATTGATT+AGG | 0.374475 | 5.3:-6247403 | None:intergenic |
| GGATAATGCTGATGAAGTTT+CGG | 0.394551 | 5.3:+6247615 | MS.gene21530:CDS |
| TTCGGAAACTGAAGGAGAAC+AGG | 0.400877 | 5.3:+6247633 | MS.gene21530:CDS |
| CGCGTCCGAAGAATTATTGC+CGG | 0.419736 | 5.3:+6248999 | MS.gene21530:CDS |
| CCACAATATCTCCAGTCCTT+AGG | 0.437951 | 5.3:-6248771 | None:intergenic |
| TTGTGCAGATATTGCATAAG+AGG | 0.442143 | 5.3:+6248710 | MS.gene21530:intron |
| GATAACCTACGTTTGTTCTC+CGG | 0.447583 | 5.3:-6248921 | None:intergenic |
| ACGAGAAGCGAGGGTGGAAG+CGG | 0.476314 | 5.3:-6247449 | None:intergenic |
| CGAAGAATTATTGCCGGCAC+AGG | 0.476448 | 5.3:+6249005 | MS.gene21530:CDS |
| CGAAGAAGCCCTGGAAATGA+AGG | 0.478400 | 5.3:-6247479 | None:intergenic |
| TGATGAAAATCCTGAAGCTT+CGG | 0.493188 | 5.3:+6247594 | MS.gene21530:CDS |
| ATAAAACCTGAAGAAATACT+TGG | 0.497075 | 5.3:-6247257 | None:intergenic |
| ACGAGTTTGTCTAGGCGGCT+TGG | 0.497233 | 5.3:-6247686 | None:intergenic |
| CTGTGCCGGCAATAATTCTT+CGG | 0.499754 | 5.3:-6249004 | None:intergenic |
| TGGTAAAGCACCGAAAGGTC+AGG | 0.504557 | 5.3:+6249909 | MS.gene21530:CDS |
| CAATGTCCTCCAACAAAGCT+AGG | 0.507926 | 5.3:+6247409 | MS.gene21530:CDS |
| TTTGGATTCTGCATCTGAGG+TGG | 0.512535 | 5.3:+6247657 | MS.gene21530:CDS |
| ATATCTCCAGTCCTTAGGTC+AGG | 0.513987 | 5.3:-6248766 | None:intergenic |
| CCTAAGGACTGGAGATATTG+TGG | 0.515943 | 5.3:+6248771 | MS.gene21530:CDS |
| GACTATCTCAACCCCTGTGC+CGG | 0.526794 | 5.3:-6249018 | None:intergenic |
| ATCAACATTTGAAACAGCCT+CGG | 0.532181 | 5.3:-6247575 | None:intergenic |
| GGATTCTGCATCTGAGGTGG+AGG | 0.532596 | 5.3:+6247660 | MS.gene21530:CDS |
| GTGACCTTATCATTTGAAAG+TGG | 0.534354 | 5.3:-6249975 | None:intergenic |
| TAACTTACCCTTCATTTCCA+GGG | 0.543085 | 5.3:+6247471 | MS.gene21530:CDS |
| AGATATTGTGGAAATCAGAT+TGG | 0.543994 | 5.3:+6248783 | MS.gene21530:CDS |
| TTAAGCTTGGTGATGTTATG+GGG | 0.548890 | 5.3:+6247710 | MS.gene21530:CDS |
| GTCATATCAAGACAAAATGC+TGG | 0.549163 | 5.3:+6248960 | MS.gene21530:CDS |
| AATTGAGGTCGAAGAAGCCC+TGG | 0.553413 | 5.3:-6247488 | None:intergenic |
| ATTACAGCGCCATGAAATTG+AGG | 0.555928 | 5.3:-6247503 | None:intergenic |
| GAGAAACCTAGCTTTGTTGG+AGG | 0.558664 | 5.3:-6247415 | None:intergenic |
| ACCACTCCTGACCTAAGGAC+TGG | 0.565262 | 5.3:+6248760 | MS.gene21530:CDS |
| TCAGCTCTCACAATAAAACT+AGG | 0.565579 | 5.3:-6247544 | None:intergenic |
| GAAGAATTATTGCCGGCACA+GGG | 0.573107 | 5.3:+6249006 | MS.gene21530:CDS |
| AGACAAACTCGTGTTAAGCT+TGG | 0.574922 | 5.3:+6247697 | MS.gene21530:CDS |
| TCCAGTCCTTAGGTCAGGAG+TGG | 0.583721 | 5.3:-6248761 | None:intergenic |
| AGCTTAACACGAGTTTGTCT+AGG | 0.586483 | 5.3:-6247694 | None:intergenic |
| TGAGGACCACTCCTGACCTA+AGG | 0.591875 | 5.3:+6248755 | MS.gene21530:CDS |
| TAAAACCTGAAGAAATACTT+GGG | 0.592119 | 5.3:-6247256 | None:intergenic |
| CATTTGAAAGTGGAGAATCT+GGG | 0.592345 | 5.3:-6249965 | None:intergenic |
| TAAGTTACGAGAAGCGAGGG+TGG | 0.596133 | 5.3:-6247455 | None:intergenic |
| TGTGCAGATATTGCATAAGA+GGG | 0.596182 | 5.3:+6248711 | MS.gene21530:intron |
| AAACTAGGTTTAGCAATGAG+AGG | 0.610020 | 5.3:-6247529 | None:intergenic |
| GGGTAAGTTACGAGAAGCGA+GGG | 0.612377 | 5.3:-6247458 | None:intergenic |
| AAAGCACCGAAAGGTCAGGC+AGG | 0.614155 | 5.3:+6249913 | MS.gene21530:CDS |
| GATGAAGTTTCGGAAACTGA+AGG | 0.614399 | 5.3:+6247625 | MS.gene21530:CDS |
| GAGAGCTGATTCCAATTCCG+AGG | 0.627170 | 5.3:+6247558 | MS.gene21530:CDS |
| TTAACACGAGTTTGTCTAGG+CGG | 0.648787 | 5.3:-6247691 | None:intergenic |
| AAACATCAAAGAAATCAAAG+TGG | 0.650615 | 5.3:+6249889 | MS.gene21530:CDS |
| CAAAGTGGTAAAGCACCGAA+AGG | 0.655009 | 5.3:+6249904 | MS.gene21530:CDS |
| AAGAATTATTGCCGGCACAG+GGG | 0.659206 | 5.3:+6249007 | MS.gene21530:CDS |
| TTGCAGCTTCAGATGAAGTG+AGG | 0.663436 | 5.3:+6248737 | MS.gene21530:CDS |
| TAAGCTTGGTGATGTTATGG+GGG | 0.663709 | 5.3:+6247711 | MS.gene21530:CDS |
| GAAGAAGCCCTGGAAATGAA+GGG | 0.680632 | 5.3:-6247478 | None:intergenic |
| AGGGTAAGTTACGAGAAGCG+AGG | 0.688532 | 5.3:-6247459 | None:intergenic |
| AAGTTCCGGAGAACAAACGT+AGG | 0.780898 | 5.3:+6248916 | MS.gene21530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTATGAAATATGATATTA+AGG | + | chr5.3:6249693-6249712 | MS.gene21530:intron | 15.0% |
| !! | TATGCTTATAATAGAAAATT+TGG | + | chr5.3:6248022-6248041 | MS.gene21530:intron | 15.0% |
| !!! | CTATTTCATTTTCATATATT+TGG | - | chr5.3:6249234-6249253 | None:intergenic | 15.0% |
| !! | AATATTACTTACACATGAAT+AGG | + | chr5.3:6248066-6248085 | MS.gene21530:intron | 20.0% |
| !! | ACTAATCCCTATTAAATTAT+TGG | - | chr5.3:6249079-6249098 | None:intergenic | 20.0% |
| !! | AGTAGTCTATATATTAACAT+TGG | - | chr5.3:6247965-6247984 | None:intergenic | 20.0% |
| !! | ATAAGATGATATGATTTATG+TGG | + | chr5.3:6248867-6248886 | MS.gene21530:intron | 20.0% |
| !! | CAAAAATCCAAATTCTAATA+TGG | - | chr5.3:6248367-6248386 | None:intergenic | 20.0% |
| !! | CAAAAGAAGAAAAAAAATGA+GGG | + | chr5.3:6248646-6248665 | MS.gene21530:intron | 20.0% |
| !! | CAAATTAATATGTTGAAGAA+GGG | + | chr5.3:6248842-6248861 | MS.gene21530:intron | 20.0% |
| !! | CTAATCCCTATTAAATTATT+GGG | - | chr5.3:6249078-6249097 | None:intergenic | 20.0% |
| !! | TATGACAATACCTTTATAAA+TGG | - | chr5.3:6248946-6248965 | None:intergenic | 20.0% |
| !! | TCAAATTAATATGTTGAAGA+AGG | + | chr5.3:6248841-6248860 | MS.gene21530:intron | 20.0% |
| !! | TTTAAACAACTTCGAATAAT+AGG | - | chr5.3:6248306-6248325 | None:intergenic | 20.0% |
| !! | TTTCTCCCAATAATTTAATA+GGG | + | chr5.3:6249070-6249089 | MS.gene21530:intron | 20.0% |
| !!! | AAGTATTTGTTACAATGAAT+TGG | - | chr5.3:6247314-6247333 | None:intergenic | 20.0% |
| !!! | CATATTAGAATTTGGATTTT+TGG | + | chr5.3:6248365-6248384 | MS.gene21530:intron | 20.0% |
| !!! | CTCATTTTTTTTCTTCTTTT+GGG | - | chr5.3:6248647-6248666 | None:intergenic | 20.0% |
| !!! | TTATAAAATGAAGCGTTTAT+CGG | + | chr5.3:6249806-6249825 | MS.gene21530:intron | 20.0% |
| ! | AAACATCAAAGAAATCAAAG+TGG | + | chr5.3:6249889-6249908 | MS.gene21530:CDS | 25.0% |
| ! | ACCAATTTCTTAACAATGAA+AGG | - | chr5.3:6249378-6249397 | None:intergenic | 25.0% |
| ! | ACCTTTCATTGTTAAGAAAT+TGG | + | chr5.3:6249374-6249393 | MS.gene21530:intron | 25.0% |
| ! | ACTACTAGTAAATGTTCATT+AGG | + | chr5.3:6247982-6248001 | MS.gene21530:intron | 25.0% |
| ! | AGAGATATCATTAAACAACT+AGG | - | chr5.3:6249540-6249559 | None:intergenic | 25.0% |
| ! | ATAAAACCTGAAGAAATACT+TGG | - | chr5.3:6247260-6247279 | None:intergenic | 25.0% |
| ! | ATATCCTTGATCTTACAAAT+TGG | + | chr5.3:6249433-6249452 | MS.gene21530:intron | 25.0% |
| ! | ATTTCTATTTGAAGGTTACA+TGG | + | chr5.3:6248544-6248563 | MS.gene21530:intron | 25.0% |
| ! | CCAAAAGAAGAAAAAAAATG+AGG | + | chr5.3:6248645-6248664 | MS.gene21530:intron | 25.0% |
| ! | CTATTAAATTATTGGGAGAA+AGG | - | chr5.3:6249071-6249090 | None:intergenic | 25.0% |
| ! | CTTTCTCCCAATAATTTAAT+AGG | + | chr5.3:6249069-6249088 | MS.gene21530:intron | 25.0% |
| ! | TAAAACCTGAAGAAATACTT+GGG | - | chr5.3:6247259-6247278 | None:intergenic | 25.0% |
| ! | TACAACACATTTAATGTGTT+GGG | - | chr5.3:6248443-6248462 | None:intergenic | 25.0% |
| ! | TCAAATAGAAATTTGATCCA+AGG | - | chr5.3:6248536-6248555 | None:intergenic | 25.0% |
| ! | TGGATCAAATTTCTATTTGA+AGG | + | chr5.3:6248536-6248555 | MS.gene21530:intron | 25.0% |
| ! | TTAATAACAGTATAGAGTCA+TGG | - | chr5.3:6247750-6247769 | None:intergenic | 25.0% |
| !! | AAGGATATTTTCATCTGTAT+TGG | - | chr5.3:6249421-6249440 | None:intergenic | 25.0% |
| !! | ACTTTGATTTCTTTGATGTT+TGG | - | chr5.3:6249890-6249909 | None:intergenic | 25.0% |
| !! | ATTTTATAAGGCAAGGTAAT+GGG | - | chr5.3:6249795-6249814 | None:intergenic | 25.0% |
| !! | CATTGTTAAGAAATTGGTTT+AGG | + | chr5.3:6249380-6249399 | MS.gene21530:intron | 25.0% |
| !! | GATAAACGCTTCATTTTATA+AGG | - | chr5.3:6249807-6249826 | None:intergenic | 25.0% |
| !!! | CCTCATTTTTTTTCTTCTTT+TGG | - | chr5.3:6248648-6248667 | None:intergenic | 25.0% |
| !!! | CTTTGCATTATTTTTCTCTA+AGG | + | chr5.3:6249644-6249663 | MS.gene21530:intron | 25.0% |
| AAAGAACTGCATACGTTTAT+TGG | - | chr5.3:6249628-6249647 | None:intergenic | 30.0% | |
| AAATGAAATCTCATGTGTGT+TGG | - | chr5.3:6247844-6247863 | None:intergenic | 30.0% | |
| ACGTAATAATGTGATCCATT+TGG | - | chr5.3:6249749-6249768 | None:intergenic | 30.0% | |
| AGACCTTATAAGCACTAAAA+AGG | + | chr5.3:6248400-6248419 | MS.gene21530:intron | 30.0% | |
| AGATATTGTGGAAATCAGAT+TGG | + | chr5.3:6248783-6248802 | MS.gene21530:CDS | 30.0% | |
| ATCTTCCAACATATTTACCT+TGG | + | chr5.3:6248516-6248535 | MS.gene21530:intron | 30.0% | |
| ATTACTTACACATGAATAGG+AGG | + | chr5.3:6248069-6248088 | MS.gene21530:intron | 30.0% | |
| ATTCAAGCAAATTAGCCAAA+TGG | + | chr5.3:6249731-6249750 | MS.gene21530:intron | 30.0% | |
| CATTTCATTTGCCATCATTT+CGG | - | chr5.3:6248469-6248488 | None:intergenic | 30.0% | |
| CGTAGGTTATCCATTTATAA+AGG | + | chr5.3:6248933-6248952 | MS.gene21530:CDS | 30.0% | |
| CTACAACACATTTAATGTGT+TGG | - | chr5.3:6248444-6248463 | None:intergenic | 30.0% | |
| GCTCATACCATATTAGAATT+TGG | + | chr5.3:6248357-6248376 | MS.gene21530:intron | 30.0% | |
| GTTGGGTTTATTCATCAATA+TGG | - | chr5.3:6248426-6248445 | None:intergenic | 30.0% | |
| TATGAGCTCTCATTTAACAA+AGG | - | chr5.3:6248344-6248363 | None:intergenic | 30.0% | |
| TGGATAATAATGAGATGAGA+GGG | - | chr5.3:6247294-6247313 | None:intergenic | 30.0% | |
| TTAAACAACTAGGACTGAAA+AGG | - | chr5.3:6249530-6249549 | None:intergenic | 30.0% | |
| TTGATCCAAGGTAAATATGT+TGG | - | chr5.3:6248524-6248543 | None:intergenic | 30.0% | |
| TTGGATAATAATGAGATGAG+AGG | - | chr5.3:6247295-6247314 | None:intergenic | 30.0% | |
| ! | CATTTTATAAGGCAAGGTAA+TGG | - | chr5.3:6249796-6249815 | None:intergenic | 30.0% |
| ! | TCATTATTGCTGTTGTGATT+AGG | + | chr5.3:6249103-6249122 | MS.gene21530:intron | 30.0% |
| !! | TTTTTAGTGCTTATAAGGTC+TGG | - | chr5.3:6248401-6248420 | None:intergenic | 30.0% |
| !!! | TTTATTTTTGTCCTACTTGC+AGG | + | chr5.3:6248893-6248912 | MS.gene21530:intron | 30.0% |
| AAACTAGGTTTAGCAATGAG+AGG | - | chr5.3:6247532-6247551 | None:intergenic | 35.0% | |
| AAACTGGAAGATGGGAATTT+GGG | + | chr5.3:6249139-6249158 | MS.gene21530:intron | 35.0% | |
| AATGTTGTGTTTACGAGGAT+TGG | - | chr5.3:6248141-6248160 | None:intergenic | 35.0% | |
| ACCTTCTACATAGAATCCAA+AGG | - | chr5.3:6248200-6248219 | None:intergenic | 35.0% | |
| CATTTGAAAGTGGAGAATCT+GGG | - | chr5.3:6249968-6249987 | None:intergenic | 35.0% | |
| CCTTCTACATAGAATCCAAA+GGG | - | chr5.3:6248199-6248218 | None:intergenic | 35.0% | |
| CGAAATGATGGCAAATGAAA+TGG | + | chr5.3:6248467-6248486 | MS.gene21530:intron | 35.0% | |
| GAGTCCAATTTGTAAGATCA+AGG | - | chr5.3:6249440-6249459 | None:intergenic | 35.0% | |
| GGAATCATGTTAGTGTCAAT+AGG | - | chr5.3:6249774-6249793 | None:intergenic | 35.0% | |
| GGATAATGCTGATGAAGTTT+CGG | + | chr5.3:6247615-6247634 | MS.gene21530:CDS | 35.0% | |
| GTCATATCAAGACAAAATGC+TGG | + | chr5.3:6248960-6248979 | MS.gene21530:CDS | 35.0% | |
| GTTGGAAAGTCAAACAGAAA+GGG | - | chr5.3:6249495-6249514 | None:intergenic | 35.0% | |
| TAACTTACCCTTCATTTCCA+GGG | + | chr5.3:6247471-6247490 | MS.gene21530:CDS | 35.0% | |
| TCAGCTCTCACAATAAAACT+AGG | - | chr5.3:6247547-6247566 | None:intergenic | 35.0% | |
| TCATTTGAAAGTGGAGAATC+TGG | - | chr5.3:6249969-6249988 | None:intergenic | 35.0% | |
| TGATGAAAATCCTGAAGCTT+CGG | + | chr5.3:6247594-6247613 | MS.gene21530:CDS | 35.0% | |
| TGTGCAGATATTGCATAAGA+GGG | + | chr5.3:6248711-6248730 | MS.gene21530:intron | 35.0% | |
| TGTTGGAAAGTCAAACAGAA+AGG | - | chr5.3:6249496-6249515 | None:intergenic | 35.0% | |
| TGTTGTGATTAGGATAGAAG+AGG | + | chr5.3:6249113-6249132 | MS.gene21530:intron | 35.0% | |
| TTATAAGGTCTGGATGCATT+TGG | - | chr5.3:6248391-6248410 | None:intergenic | 35.0% | |
| TTGTGCAGATATTGCATAAG+AGG | + | chr5.3:6248710-6248729 | MS.gene21530:intron | 35.0% | |
| ! | ACGCTTCATTTTATAAGGCA+AGG | - | chr5.3:6249802-6249821 | None:intergenic | 35.0% |
| ! | ATCAACATTTGAAACAGCCT+CGG | - | chr5.3:6247578-6247597 | None:intergenic | 35.0% |
| ! | CTCTTTCCTCTAAAAGAATG+AGG | + | chr5.3:6249556-6249575 | MS.gene21530:intron | 35.0% |
| ! | TCTCAACCTCATTCTTTTAG+AGG | - | chr5.3:6249565-6249584 | None:intergenic | 35.0% |
| ! | TGTTTGACTTTCCAACACTT+TGG | + | chr5.3:6249499-6249518 | MS.gene21530:intron | 35.0% |
| ! | TTTGTTGGAGGACATTGATT+AGG | - | chr5.3:6247406-6247425 | None:intergenic | 35.0% |
| !! | AAAAGGCATTTCCAAAGTGT+TGG | - | chr5.3:6249513-6249532 | None:intergenic | 35.0% |
| !! | CCATTTGCTTTTGACACTTT+CGG | - | chr5.3:6248246-6248265 | None:intergenic | 35.0% |
| !! | GCAAAGTTGCAGATTTTAAC+AGG | - | chr5.3:6249354-6249373 | None:intergenic | 35.0% |
| !! | GTTAAGCTTGGTGATGTTAT+GGG | + | chr5.3:6247709-6247728 | MS.gene21530:CDS | 35.0% |
| !! | TCAATGAACTCTGAAATGCA+TGG | + | chr5.3:6248681-6248700 | MS.gene21530:intron | 35.0% |
| !! | TGGCCTTTTTAGTGCTTATA+AGG | - | chr5.3:6248406-6248425 | None:intergenic | 35.0% |
| !! | TGTTAAGCTTGGTGATGTTA+TGG | + | chr5.3:6247708-6247727 | MS.gene21530:CDS | 35.0% |
| !! | TTAAGCTTGGTGATGTTATG+GGG | + | chr5.3:6247710-6247729 | MS.gene21530:CDS | 35.0% |
| !!! | ATTGGTTTTGCCATCCAAAA+AGG | - | chr5.3:6248123-6248142 | None:intergenic | 35.0% |
| AACACAACATTCATGGACCT+AGG | + | chr5.3:6248150-6248169 | MS.gene21530:intron | 40.0% | |
| AAGAGGTTCAAACTGGAAGA+TGG | + | chr5.3:6249130-6249149 | MS.gene21530:intron | 40.0% | |
| ACCAATTCATCTCTGTAAGG+AGG | - | chr5.3:6248282-6248301 | None:intergenic | 40.0% | |
| AGAATCCAAAGGGTTATGCA+TGG | - | chr5.3:6248189-6248208 | None:intergenic | 40.0% | |
| AGACAAACTCGTGTTAAGCT+TGG | + | chr5.3:6247697-6247716 | MS.gene21530:CDS | 40.0% | |
| AGAGGTTCAAACTGGAAGAT+GGG | + | chr5.3:6249131-6249150 | MS.gene21530:intron | 40.0% | |
| AGCTTAACACGAGTTTGTCT+AGG | - | chr5.3:6247697-6247716 | None:intergenic | 40.0% | |
| AGGATAGAAGAGGTTCAAAC+TGG | + | chr5.3:6249123-6249142 | MS.gene21530:intron | 40.0% | |
| ATGGCAATGTTATGTCTCCT+AGG | - | chr5.3:6248170-6248189 | None:intergenic | 40.0% | |
| ATTACAGCGCCATGAAATTG+AGG | - | chr5.3:6247506-6247525 | None:intergenic | 40.0% | |
| CAAACTGGAAGATGGGAATT+TGG | + | chr5.3:6249138-6249157 | MS.gene21530:intron | 40.0% | |
| CAAATGAAATGGCCTAAAGG+TGG | + | chr5.3:6248478-6248497 | MS.gene21530:intron | 40.0% | |
| CCATGAATGTTGTGTTTACG+AGG | - | chr5.3:6248146-6248165 | None:intergenic | 40.0% | |
| CCCTTTGGATTCTATGTAGA+AGG | + | chr5.3:6248196-6248215 | MS.gene21530:intron | 40.0% | |
| CCTCGTAAACACAACATTCA+TGG | + | chr5.3:6248143-6248162 | MS.gene21530:intron | 40.0% | |
| CTTCTTCGACCTCAATTTCA+TGG | + | chr5.3:6247494-6247513 | MS.gene21530:CDS | 40.0% | |
| GATAACCTACGTTTGTTCTC+CGG | - | chr5.3:6248924-6248943 | None:intergenic | 40.0% | |
| GATGAAGTTTCGGAAACTGA+AGG | + | chr5.3:6247625-6247644 | MS.gene21530:CDS | 40.0% | |
| GGTACCAATTCATCTCTGTA+AGG | - | chr5.3:6248285-6248304 | None:intergenic | 40.0% | |
| GGTCATCCAATGTCTCTAAA+GGG | - | chr5.3:6249213-6249232 | None:intergenic | 40.0% | |
| GTAACTTACCCTTCATTTCC+AGG | + | chr5.3:6247470-6247489 | MS.gene21530:CDS | 40.0% | |
| TAACACAAAATGCAGCAGCT+TGG | - | chr5.3:6249296-6249315 | None:intergenic | 40.0% | |
| TCCTCCTTACAGAGATGAAT+TGG | + | chr5.3:6248278-6248297 | MS.gene21530:intron | 40.0% | |
| TGGAAGATCTGCCTTAATTG+CGG | - | chr5.3:6248504-6248523 | None:intergenic | 40.0% | |
| TGGCAAATGAAATGGCCTAA+AGG | + | chr5.3:6248475-6248494 | MS.gene21530:intron | 40.0% | |
| TGGTCATCCAATGTCTCTAA+AGG | - | chr5.3:6249214-6249233 | None:intergenic | 40.0% | |
| TTAACACGAGTTTGTCTAGG+CGG | - | chr5.3:6247694-6247713 | None:intergenic | 40.0% | |
| ! | AACTGAAGGAGAACAGGTTT+TGG | + | chr5.3:6247639-6247658 | MS.gene21530:CDS | 40.0% |
| ! | ATTTGAAACAGCCTCGGAAT+TGG | - | chr5.3:6247572-6247591 | None:intergenic | 40.0% |
| ! | TGAAGTCCCTTTAGAGACAT+TGG | + | chr5.3:6249204-6249223 | MS.gene21530:intron | 40.0% |
| !! | AAGAGTGAGGGTACTTACAT+TGG | - | chr5.3:6249047-6249066 | None:intergenic | 40.0% |
| !! | AGAGTGAGGGTACTTACATT+GGG | - | chr5.3:6249046-6249065 | None:intergenic | 40.0% |
| !! | CAGATTTTAACAGGCAACCA+TGG | - | chr5.3:6249345-6249364 | None:intergenic | 40.0% |
| !! | CCGAAAGTGTCAAAAGCAAA+TGG | + | chr5.3:6248243-6248262 | MS.gene21530:intron | 40.0% |
| !! | GAAGAGAAACCTAGCTTTGT+TGG | - | chr5.3:6247421-6247440 | None:intergenic | 40.0% |
| !! | TAAGCTTGGTGATGTTATGG+GGG | + | chr5.3:6247711-6247730 | MS.gene21530:CDS | 40.0% |
| AAGAATTATTGCCGGCACAG+GGG | + | chr5.3:6249007-6249026 | MS.gene21530:CDS | 45.0% | |
| AAGTTCCGGAGAACAAACGT+AGG | + | chr5.3:6248916-6248935 | MS.gene21530:CDS | 45.0% | |
| ACACAAACACGAACACCAGA+CGG | - | chr5.3:6247895-6247914 | None:intergenic | 45.0% | |
| ACACATGAATAGGAGGCAAG+CGG | + | chr5.3:6248076-6248095 | MS.gene21530:intron | 45.0% | |
| ATATCTCCAGTCCTTAGGTC+AGG | - | chr5.3:6248769-6248788 | None:intergenic | 45.0% | |
| ATTGGACTCACTCACTCCAT+TGG | + | chr5.3:6249451-6249470 | MS.gene21530:intron | 45.0% | |
| CAATGTCCTCCAACAAAGCT+AGG | + | chr5.3:6247409-6247428 | MS.gene21530:CDS | 45.0% | |
| CATGGTACCAGTACTAGCAT+AGG | - | chr5.3:6249327-6249346 | None:intergenic | 45.0% | |
| CATTGCCATGCATAACCCTT+TGG | + | chr5.3:6248181-6248200 | MS.gene21530:intron | 45.0% | |
| CCACAATATCTCCAGTCCTT+AGG | - | chr5.3:6248774-6248793 | None:intergenic | 45.0% | |
| CCTAAGGACTGGAGATATTG+TGG | + | chr5.3:6248771-6248790 | MS.gene21530:CDS | 45.0% | |
| GAAGAAGCCCTGGAAATGAA+GGG | - | chr5.3:6247481-6247500 | None:intergenic | 45.0% | |
| GAAGAATTATTGCCGGCACA+GGG | + | chr5.3:6249006-6249025 | MS.gene21530:CDS | 45.0% | |
| GCACGATTACAACTCTCCAA+TGG | - | chr5.3:6249470-6249489 | None:intergenic | 45.0% | |
| GGCTTCCCAAGTATTTCTTC+AGG | + | chr5.3:6247251-6247270 | MS.gene21530:CDS | 45.0% | |
| TCAGCATTATCCGAAGCTTC+AGG | - | chr5.3:6247607-6247626 | None:intergenic | 45.0% | |
| TGCCATCCAAAAAGGTCTAG+CGG | - | chr5.3:6248115-6248134 | None:intergenic | 45.0% | |
| TGTCATGCCTATGCTAGTAC+TGG | + | chr5.3:6249317-6249336 | MS.gene21530:intron | 45.0% | |
| TTCGGAAACTGAAGGAGAAC+AGG | + | chr5.3:6247633-6247652 | MS.gene21530:CDS | 45.0% | |
| TTGCAGCTTCAGATGAAGTG+AGG | + | chr5.3:6248737-6248756 | MS.gene21530:CDS | 45.0% | |
| TTTGGATTCTGCATCTGAGG+TGG | + | chr5.3:6247657-6247676 | MS.gene21530:CDS | 45.0% | |
| ! | CTGTGCCGGCAATAATTCTT+CGG | - | chr5.3:6249007-6249026 | None:intergenic | 45.0% |
| ! | GCACTGACACTTCAGATCAA+AGG | + | chr5.3:6247813-6247832 | MS.gene21530:intron | 45.0% |
| !! | CAAAGTGGTAAAGCACCGAA+AGG | + | chr5.3:6249904-6249923 | MS.gene21530:CDS | 45.0% |
| !! | CTATGCTAGTACTGGTACCA+TGG | + | chr5.3:6249325-6249344 | MS.gene21530:intron | 45.0% |
| !! | GAGAAACCTAGCTTTGTTGG+AGG | - | chr5.3:6247418-6247437 | None:intergenic | 45.0% |
| !!! | GGTTTTGGATTCTGCATCTG+AGG | + | chr5.3:6247654-6247673 | MS.gene21530:CDS | 45.0% |
| AATTGAGGTCGAAGAAGCCC+TGG | - | chr5.3:6247491-6247510 | None:intergenic | 50.0% | |
| AGGGTAAGTTACGAGAAGCG+AGG | - | chr5.3:6247462-6247481 | None:intergenic | 50.0% | |
| CACATGAATAGGAGGCAAGC+GGG | + | chr5.3:6248077-6248096 | MS.gene21530:intron | 50.0% | |
| CCTAAAGGTGGCCGCAATTA+AGG | + | chr5.3:6248490-6248509 | MS.gene21530:intron | 50.0% | |
| CCTTAATTGCGGCCACCTTT+AGG | - | chr5.3:6248493-6248512 | None:intergenic | 50.0% | |
| CGAAGAAGCCCTGGAAATGA+AGG | - | chr5.3:6247482-6247501 | None:intergenic | 50.0% | |
| CGAAGAATTATTGCCGGCAC+AGG | + | chr5.3:6249005-6249024 | MS.gene21530:CDS | 50.0% | |
| CGCGTCCGAAGAATTATTGC+CGG | + | chr5.3:6248999-6249018 | MS.gene21530:CDS | 50.0% | |
| GGGTAAGTTACGAGAAGCGA+GGG | - | chr5.3:6247461-6247480 | None:intergenic | 50.0% | |
| GTCCTACTTGCAGGAAGTTC+CGG | + | chr5.3:6248902-6248921 | MS.gene21530:intron | 50.0% | |
| TAAGTTACGAGAAGCGAGGG+TGG | - | chr5.3:6247458-6247477 | None:intergenic | 50.0% | |
| TGGGAGAAAGGCAAGAGTGA+GGG | - | chr5.3:6249059-6249078 | None:intergenic | 50.0% | |
| TTGGGAGAAAGGCAAGAGTG+AGG | - | chr5.3:6249060-6249079 | None:intergenic | 50.0% | |
| TTTCGGCTTCCTAGCATCAG+AGG | - | chr5.3:6248229-6248248 | None:intergenic | 50.0% | |
| ! | GAGAGCTGATTCCAATTCCG+AGG | + | chr5.3:6247558-6247577 | MS.gene21530:CDS | 50.0% |
| ! | GTGTTGTAGCGCCGAAATGA+TGG | + | chr5.3:6248455-6248474 | MS.gene21530:intron | 50.0% |
| !! | TGGTAAAGCACCGAAAGGTC+AGG | + | chr5.3:6249909-6249928 | MS.gene21530:CDS | 50.0% |
| ACCACTCCTGACCTAAGGAC+TGG | + | chr5.3:6248760-6248779 | MS.gene21530:CDS | 55.0% | |
| ACGAGTTTGTCTAGGCGGCT+TGG | - | chr5.3:6247689-6247708 | None:intergenic | 55.0% | |
| CTCCGGAACTTCCTGCAAGT+AGG | - | chr5.3:6248907-6248926 | None:intergenic | 55.0% | |
| GACTATCTCAACCCCTGTGC+CGG | - | chr5.3:6249021-6249040 | None:intergenic | 55.0% | |
| GGTCAACAGCCTCTGATGCT+AGG | + | chr5.3:6248217-6248236 | MS.gene21530:intron | 55.0% | |
| GTCTTGCCTGCCTGACCTTT+CGG | - | chr5.3:6249922-6249941 | None:intergenic | 55.0% | |
| TCCAGTCCTTAGGTCAGGAG+TGG | - | chr5.3:6248764-6248783 | None:intergenic | 55.0% | |
| TGAGGACCACTCCTGACCTA+AGG | + | chr5.3:6248755-6248774 | MS.gene21530:CDS | 55.0% | |
| ! | CGCCGCTAGACCTTTTTGGA+TGG | + | chr5.3:6248110-6248129 | MS.gene21530:intron | 55.0% |
| ! | GGATTCTGCATCTGAGGTGG+AGG | + | chr5.3:6247660-6247679 | MS.gene21530:CDS | 55.0% |
| !! | AAAGCACCGAAAGGTCAGGC+AGG | + | chr5.3:6249913-6249932 | MS.gene21530:CDS | 55.0% |
| ACGAGAAGCGAGGGTGGAAG+CGG | - | chr5.3:6247452-6247471 | None:intergenic | 60.0% | |
| CGAGAGTTGTCGTGTCCGTC+TGG | + | chr5.3:6247877-6247896 | MS.gene21530:intron | 60.0% | |
| ! | GCTGCGCCGCTAGACCTTTT+TGG | + | chr5.3:6248106-6248125 | MS.gene21530:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 6247249 | 6249988 | 6247249 | ID=MS.gene21530 |
| chr5.3 | mRNA | 6247249 | 6249988 | 6247249 | ID=MS.gene21530.t1;Parent=MS.gene21530 |
| chr5.3 | exon | 6247249 | 6247272 | 6247249 | ID=MS.gene21530.t1.exon1;Parent=MS.gene21530.t1 |
| chr5.3 | CDS | 6247249 | 6247272 | 6247249 | ID=cds.MS.gene21530.t1;Parent=MS.gene21530.t1 |
| chr5.3 | exon | 6247391 | 6247732 | 6247391 | ID=MS.gene21530.t1.exon2;Parent=MS.gene21530.t1 |
| chr5.3 | CDS | 6247391 | 6247732 | 6247391 | ID=cds.MS.gene21530.t1;Parent=MS.gene21530.t1 |
| chr5.3 | exon | 6248718 | 6248804 | 6248718 | ID=MS.gene21530.t1.exon3;Parent=MS.gene21530.t1 |
| chr5.3 | CDS | 6248718 | 6248804 | 6248718 | ID=cds.MS.gene21530.t1;Parent=MS.gene21530.t1 |
| chr5.3 | exon | 6248915 | 6249048 | 6248915 | ID=MS.gene21530.t1.exon4;Parent=MS.gene21530.t1 |
| chr5.3 | CDS | 6248915 | 6249048 | 6248915 | ID=cds.MS.gene21530.t1;Parent=MS.gene21530.t1 |
| chr5.3 | exon | 6249880 | 6249988 | 6249880 | ID=MS.gene21530.t1.exon5;Parent=MS.gene21530.t1 |
| chr5.3 | CDS | 6249880 | 6249988 | 6249880 | ID=cds.MS.gene21530.t1;Parent=MS.gene21530.t1 |
| Gene Sequence |
| Protein sequence |
