Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49765.t1 | XP_013446933.1 | 94.6 | 185 | 10 | 0 | 36 | 220 | 38 | 222 | 9.20E-104 | 386.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49765.t1 | Q67YC9 | 62.6 | 163 | 60 | 1 | 37 | 199 | 36 | 197 | 1.7e-58 | 227.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49765.t1 | A0A072U547 | 94.6 | 185 | 10 | 0 | 36 | 220 | 38 | 222 | 6.6e-104 | 386.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene49765 | 0.859084 | 5.28E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene49765 | 0.890955 | 6.17E-74 | -1.69E-46 |
| MS.gene049173 | MS.gene49765 | 0.859148 | 5.06E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene49765 | 0.863018 | 3.36E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene49765 | 0.885024 | 1.16E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene49765 | 0.815606 | 8.48E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene49765 | 0.915149 | 8.29E-85 | -1.69E-46 |
| MS.gene049320 | MS.gene49765 | 0.880927 | 3.67E-70 | -1.69E-46 |
| MS.gene049427 | MS.gene49765 | 0.889625 | 2.05E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene49765 | 0.885201 | 9.97E-72 | -1.69E-46 |
| MS.gene049614 | MS.gene49765 | 0.844611 | 6.79E-59 | -1.69E-46 |
| MS.gene049627 | MS.gene49765 | 0.840857 | 6.75E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene49765 | 0.8441 | 9.32E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene49765 | 0.89741 | 1.45E-76 | -1.69E-46 |
| MS.gene05010 | MS.gene49765 | 0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene050163 | MS.gene49765 | 0.885026 | 1.16E-71 | -1.69E-46 |
| MS.gene050165 | MS.gene49765 | 0.861325 | 1.11E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene49765 | 0.815143 | 1.07E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene49765 | 0.870935 | 1.00E-66 | -1.69E-46 |
| MS.gene050432 | MS.gene49765 | 0.806189 | 9.28E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene49765 | 0.869214 | 3.66E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene49765 | 0.861752 | 8.23E-64 | -1.69E-46 |
| MS.gene050538 | MS.gene49765 | 0.832125 | 1.13E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene49765 | 0.855868 | 4.72E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene49765 | 0.872675 | 2.65E-67 | -1.69E-46 |
| MS.gene050612 | MS.gene49765 | 0.849749 | 2.65E-60 | -1.69E-46 |
| MS.gene050675 | MS.gene49765 | 0.834052 | 3.75E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene49765 | 0.872673 | 2.65E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene49765 | 0.89698 | 2.19E-76 | -1.69E-46 |
| MS.gene050767 | MS.gene49765 | 0.841474 | 4.65E-58 | -1.69E-46 |
| MS.gene050770 | MS.gene49765 | 0.844782 | 6.11E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene49765 | 0.896599 | 3.16E-76 | -1.69E-46 |
| MS.gene050781 | MS.gene49765 | 0.81773 | 2.83E-52 | -1.69E-46 |
| MS.gene050783 | MS.gene49765 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene49765 | 0.831409 | 1.70E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene49765 | 0.825036 | 5.83E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene49765 | 0.814088 | 1.84E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene49765 | 0.81353 | 2.44E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene49765 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene49765 | 0.897054 | 2.04E-76 | -1.69E-46 |
| MS.gene050986 | MS.gene49765 | 0.849263 | 3.62E-60 | -1.69E-46 |
| MS.gene05100 | MS.gene49765 | 0.876026 | 1.94E-68 | -1.69E-46 |
| MS.gene05101 | MS.gene49765 | 0.807001 | 6.25E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene49765 | 0.827115 | 1.87E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene49765 | 0.823764 | 1.16E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene49765 | 0.814058 | 1.87E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene49765 | 0.874572 | 6.08E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene49765 | 0.857495 | 1.57E-62 | -1.69E-46 |
| MS.gene051666 | MS.gene49765 | 0.867732 | 1.10E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene49765 | 0.823654 | 1.23E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene49765 | 0.858743 | 6.68E-63 | -1.69E-46 |
| MS.gene051810 | MS.gene49765 | 0.855364 | 6.63E-62 | -1.69E-46 |
| MS.gene051838 | MS.gene49765 | 0.817545 | 3.12E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene49765 | 0.847132 | 1.40E-59 | -1.69E-46 |
| MS.gene052164 | MS.gene49765 | 0.82966 | 4.55E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene49765 | 0.887161 | 1.82E-72 | -1.69E-46 |
| MS.gene052310 | MS.gene49765 | 0.822407 | 2.41E-53 | -1.69E-46 |
| MS.gene052322 | MS.gene49765 | 0.828018 | 1.13E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene49765 | 0.874079 | 8.93E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene49765 | 0.86232 | 5.51E-64 | -1.69E-46 |
| MS.gene052481 | MS.gene49765 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene49765 | 0.832025 | 1.20E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene49765 | 0.848282 | 6.77E-60 | -1.69E-46 |
| MS.gene052485 | MS.gene49765 | 0.802666 | 5.04E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene49765 | 0.843205 | 1.62E-58 | -1.69E-46 |
| MS.gene052501 | MS.gene49765 | 0.851644 | 7.76E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene49765 | 0.862972 | 3.47E-64 | -1.69E-46 |
| MS.gene052505 | MS.gene49765 | 0.843701 | 1.19E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene49765 | 0.815576 | 8.62E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene49765 | 0.895101 | 1.32E-75 | -1.69E-46 |
| MS.gene052822 | MS.gene49765 | 0.82197 | 3.04E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene49765 | 0.85355 | 2.22E-61 | -1.69E-46 |
| MS.gene052825 | MS.gene49765 | 0.847499 | 1.11E-59 | -1.69E-46 |
| MS.gene052870 | MS.gene49765 | 0.845165 | 4.81E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene49765 | 0.850217 | 1.96E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene49765 | 0.826017 | 3.42E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene49765 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene49765 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene49765 | 0.821511 | 3.88E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene49765 | 0.843175 | 1.65E-58 | -1.69E-46 |
| MS.gene053104 | MS.gene49765 | 0.854013 | 1.63E-61 | -1.69E-46 |
| MS.gene053107 | MS.gene49765 | 0.849297 | 3.54E-60 | -1.69E-46 |
| MS.gene053203 | MS.gene49765 | 0.850221 | 1.95E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene49765 | 0.858461 | 8.11E-63 | -1.69E-46 |
| MS.gene053213 | MS.gene49765 | 0.919012 | 7.66E-87 | -1.69E-46 |
| MS.gene053286 | MS.gene49765 | 0.912633 | 1.56E-83 | -1.69E-46 |
| MS.gene053322 | MS.gene49765 | 0.890944 | 6.23E-74 | -1.69E-46 |
| MS.gene053436 | MS.gene49765 | 0.868651 | 5.57E-66 | -1.69E-46 |
| MS.gene053479 | MS.gene49765 | 0.816283 | 5.99E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene49765 | 0.827209 | 1.77E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene49765 | 0.888079 | 8.11E-73 | -1.69E-46 |
| MS.gene053579 | MS.gene49765 | 0.834528 | 2.85E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene49765 | 0.820286 | 7.43E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene49765 | 0.862874 | 3.72E-64 | -1.69E-46 |
| MS.gene053813 | MS.gene49765 | 0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene49765 | 0.856124 | 3.98E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene49765 | 0.812494 | 4.12E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene49765 | 0.829901 | 3.97E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene49765 | 0.889586 | 2.12E-73 | -1.69E-46 |
| MS.gene054421 | MS.gene49765 | -0.802859 | 4.59E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene49765 | 0.853849 | 1.82E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene49765 | 0.875713 | 2.48E-68 | -1.69E-46 |
| MS.gene054642 | MS.gene49765 | 0.891688 | 3.16E-74 | -1.69E-46 |
| MS.gene05470 | MS.gene49765 | 0.838435 | 2.88E-57 | -1.69E-46 |
| MS.gene054802 | MS.gene49765 | 0.828249 | 9.99E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene49765 | 0.824451 | 8.02E-54 | -1.69E-46 |
| MS.gene054804 | MS.gene49765 | 0.82863 | 8.08E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene49765 | 0.854555 | 1.14E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene49765 | 0.875902 | 2.14E-68 | -1.69E-46 |
| MS.gene05505 | MS.gene49765 | 0.87006 | 1.94E-66 | -1.69E-46 |
| MS.gene055206 | MS.gene49765 | 0.862256 | 5.76E-64 | -1.69E-46 |
| MS.gene055212 | MS.gene49765 | 0.842719 | 2.18E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene49765 | 0.834499 | 2.89E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene49765 | 0.852136 | 5.63E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene49765 | 0.886503 | 3.23E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene49765 | 0.840544 | 8.16E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene49765 | 0.859991 | 2.82E-63 | -1.69E-46 |
| MS.gene055499 | MS.gene49765 | 0.859926 | 2.95E-63 | -1.69E-46 |
| MS.gene055502 | MS.gene49765 | 0.891176 | 5.04E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene49765 | 0.842753 | 2.13E-58 | -1.69E-46 |
| MS.gene055605 | MS.gene49765 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene055629 | MS.gene49765 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene49765 | 0.829443 | 5.13E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene49765 | 0.81778 | 2.76E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene49765 | 0.886268 | 3.96E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene49765 | 0.875829 | 2.26E-68 | -1.69E-46 |
| MS.gene055748 | MS.gene49765 | 0.837659 | 4.56E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene49765 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene49765 | 0.826427 | 2.73E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene49765 | 0.82085 | 5.51E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene49765 | 0.853542 | 2.23E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene49765 | 0.864654 | 1.04E-64 | -1.69E-46 |
| MS.gene055956 | MS.gene49765 | -0.816474 | 5.43E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene49765 | 0.813535 | 2.44E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene49765 | 0.867981 | 9.17E-66 | -1.69E-46 |
| MS.gene056166 | MS.gene49765 | 0.825008 | 5.92E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene49765 | 0.895702 | 7.46E-76 | -1.69E-46 |
| MS.gene056409 | MS.gene49765 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene056446 | MS.gene49765 | 0.821983 | 3.02E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene49765 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene49765 | 0.840557 | 8.09E-58 | -1.69E-46 |
| MS.gene056510 | MS.gene49765 | 0.858518 | 7.80E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene49765 | 0.803762 | 2.99E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene49765 | 0.84984 | 2.50E-60 | -1.69E-46 |
| MS.gene056610 | MS.gene49765 | 0.836496 | 9.04E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene49765 | 0.89704 | 2.07E-76 | -1.69E-46 |
| MS.gene056692 | MS.gene49765 | 0.864285 | 1.36E-64 | -1.69E-46 |
| MS.gene056897 | MS.gene49765 | 0.856759 | 2.59E-62 | -1.69E-46 |
| MS.gene056898 | MS.gene49765 | 0.819012 | 1.45E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene49765 | 0.829258 | 5.69E-55 | -1.69E-46 |
| MS.gene057011 | MS.gene49765 | 0.887256 | 1.67E-72 | -1.69E-46 |
| MS.gene057076 | MS.gene49765 | 0.832993 | 6.89E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene49765 | 0.87819 | 3.43E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene49765 | 0.860692 | 1.73E-63 | -1.69E-46 |
| MS.gene057196 | MS.gene49765 | 0.817952 | 2.53E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene49765 | 0.873357 | 1.57E-67 | -1.69E-46 |
| MS.gene057332 | MS.gene49765 | 0.815122 | 1.09E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene49765 | 0.917842 | 3.24E-86 | -1.69E-46 |
| MS.gene057658 | MS.gene49765 | 0.862803 | 3.91E-64 | -1.69E-46 |
| MS.gene057831 | MS.gene49765 | 0.870486 | 1.41E-66 | -1.69E-46 |
| MS.gene057856 | MS.gene49765 | 0.807227 | 5.60E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene49765 | 0.802256 | 6.11E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene49765 | 0.879944 | 8.24E-70 | -1.69E-46 |
| MS.gene058130 | MS.gene49765 | 0.834879 | 2.32E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene49765 | 0.802521 | 5.39E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene49765 | 0.867214 | 1.61E-65 | -1.69E-46 |
| MS.gene058338 | MS.gene49765 | 0.840335 | 9.25E-58 | -1.69E-46 |
| MS.gene05837 | MS.gene49765 | 0.852907 | 3.39E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene49765 | 0.908458 | 1.67E-81 | -1.69E-46 |
| MS.gene058444 | MS.gene49765 | 0.809332 | 1.99E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene49765 | 0.910692 | 1.41E-82 | -1.69E-46 |
| MS.gene058660 | MS.gene49765 | 0.808652 | 2.79E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene49765 | 0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene49765 | 0.817163 | 3.80E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene49765 | 0.872563 | 2.89E-67 | -1.69E-46 |
| MS.gene058838 | MS.gene49765 | 0.860209 | 2.42E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene49765 | 0.877945 | 4.18E-69 | -1.69E-46 |
| MS.gene059022 | MS.gene49765 | 0.870946 | 9.93E-67 | -1.69E-46 |
| MS.gene059023 | MS.gene49765 | 0.890321 | 1.10E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene49765 | 0.85094 | 1.23E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene49765 | 0.807877 | 4.08E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene49765 | 0.817953 | 2.52E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene49765 | 0.819631 | 1.05E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene49765 | 0.866042 | 3.81E-65 | -1.69E-46 |
| MS.gene059455 | MS.gene49765 | 0.810603 | 1.06E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene49765 | 0.88412 | 2.51E-71 | -1.69E-46 |
| MS.gene059667 | MS.gene49765 | 0.800568 | 1.36E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene49765 | 0.890548 | 8.92E-74 | -1.69E-46 |
| MS.gene059688 | MS.gene49765 | 0.831853 | 1.32E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene49765 | 0.813245 | 2.82E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene49765 | 0.823055 | 1.70E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene49765 | 0.888653 | 4.88E-73 | -1.69E-46 |
| MS.gene059756 | MS.gene49765 | 0.889157 | 3.11E-73 | -1.69E-46 |
| MS.gene059801 | MS.gene49765 | 0.843033 | 1.80E-58 | -1.69E-46 |
| MS.gene059858 | MS.gene49765 | 0.812338 | 4.46E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene49765 | 0.830686 | 2.55E-55 | -1.69E-46 |
| MS.gene059902 | MS.gene49765 | 0.847652 | 1.01E-59 | -1.69E-46 |
| MS.gene059960 | MS.gene49765 | 0.885423 | 8.24E-72 | -1.69E-46 |
| MS.gene060193 | MS.gene49765 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene060403 | MS.gene49765 | 0.821601 | 3.70E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene49765 | 0.818751 | 1.66E-52 | -1.69E-46 |
| MS.gene060675 | MS.gene49765 | 0.830283 | 3.20E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene49765 | 0.811987 | 5.32E-51 | -1.69E-46 |
| MS.gene060727 | MS.gene49765 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene060728 | MS.gene49765 | 0.802522 | 5.39E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene49765 | 0.866602 | 2.53E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene49765 | 0.877979 | 4.07E-69 | -1.69E-46 |
| MS.gene060804 | MS.gene49765 | 0.856621 | 2.84E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene49765 | 0.82645 | 2.70E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene49765 | 0.831921 | 1.27E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene49765 | 0.822131 | 2.79E-53 | -1.69E-46 |
| MS.gene06092 | MS.gene49765 | 0.899946 | 1.20E-77 | -1.69E-46 |
| MS.gene060982 | MS.gene49765 | 0.8279 | 1.21E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene49765 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene49765 | 0.82752 | 1.50E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene49765 | 0.916968 | 9.40E-86 | -1.69E-46 |
| MS.gene061171 | MS.gene49765 | 0.829279 | 5.62E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene49765 | 0.888477 | 5.71E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49765.t1 | MTR_8g096080 | 92.342 | 222 | 15 | 1 | 1 | 220 | 1 | 222 | 2.13e-153 | 424 |
| MS.gene49765.t1 | MTR_8g096110 | 82.648 | 219 | 38 | 0 | 1 | 219 | 1 | 219 | 8.34e-129 | 362 |
| MS.gene49765.t1 | MTR_8g096100 | 72.642 | 212 | 57 | 1 | 1 | 211 | 1 | 212 | 1.56e-106 | 306 |
| MS.gene49765.t1 | MTR_3g098490 | 66.842 | 190 | 56 | 3 | 1 | 187 | 1 | 186 | 3.03e-90 | 264 |
| MS.gene49765.t1 | MTR_3g098500 | 61.579 | 190 | 70 | 2 | 1 | 187 | 7 | 196 | 8.12e-83 | 246 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49765.t1 | AT3G23760 | 62.162 | 185 | 67 | 2 | 9 | 191 | 11 | 194 | 1.41e-83 | 247 |
| MS.gene49765.t1 | AT4G14100 | 55.556 | 198 | 87 | 1 | 9 | 206 | 8 | 204 | 6.34e-81 | 240 |
Find 58 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCCTTCTGTTGTGTATT+TGG | 0.136397 | 4.4:+7285449 | None:intergenic |
| GCTTGATGGTGCTAATTATT+TGG | 0.169784 | 4.4:-7285790 | MS.gene49765:CDS |
| GCTCCTTCTGTTGTGTATTT+GGG | 0.213711 | 4.4:+7285450 | None:intergenic |
| TCCGGCCACGGCGCCGGAAT+TGG | 0.215529 | 4.4:+7286041 | None:intergenic |
| GGGAGAAAGTCGAATTTATT+TGG | 0.267906 | 4.4:-7285731 | MS.gene49765:CDS |
| CCACGACCCAATTGGCTTGA+TGG | 0.304709 | 4.4:-7285804 | MS.gene49765:CDS |
| CTTGATGGTGCTAATTATTT+GGG | 0.312059 | 4.4:-7285789 | MS.gene49765:CDS |
| CCGGCCACGGCGCCGGAATT+GGG | 0.367218 | 4.4:+7286042 | None:intergenic |
| TGAGAACATCAAGCTGGTAT+TGG | 0.386461 | 4.4:+7285922 | None:intergenic |
| AGGACTGAGTGGAACTGTTC+CGG | 0.404511 | 4.4:+7286023 | None:intergenic |
| ATTAGCACCATCAAGCCAAT+TGG | 0.405118 | 4.4:+7285797 | None:intergenic |
| GACCACAGAGGACCCAATTC+CGG | 0.405830 | 4.4:-7286054 | MS.gene49765:CDS |
| TTCTCAAATATGACCTTGAA+TGG | 0.424620 | 4.4:-7285905 | MS.gene49765:CDS |
| AATGTTGAAATTTCGTCCAT+TGG | 0.430457 | 4.4:+7285947 | None:intergenic |
| ATTTGAGGTTGGAGCAGTAC+TGG | 0.443095 | 4.4:-7285527 | MS.gene49765:CDS |
| ATGTTGAAATTTCGTCCATT+GGG | 0.444878 | 4.4:+7285948 | None:intergenic |
| CTCTTCGAAAACAAGACTTA+TGG | 0.444999 | 4.4:-7285980 | MS.gene49765:CDS |
| AACTGTTCCGGCCACGGCGC+CGG | 0.448851 | 4.4:+7286035 | None:intergenic |
| TGGTGCCATTGTTCCATTCA+AGG | 0.450465 | 4.4:+7285892 | None:intergenic |
| CCCAATTCCGGCGCCGTGGC+CGG | 0.459468 | 4.4:-7286042 | MS.gene49765:CDS |
| TTGGTATTCCACGACCCAAT+TGG | 0.459870 | 4.4:-7285812 | MS.gene49765:CDS |
| AACATTACACAGAAAATTGT+CGG | 0.472163 | 4.4:+7285755 | None:intergenic |
| ACTAATGAGTGAGATGAGAT+AGG | 0.485469 | 4.4:-7285377 | None:intergenic |
| CTCCTTCTGTTGTGTATTTG+GGG | 0.486624 | 4.4:+7285451 | None:intergenic |
| ACTGGATGATGCCCATTGGC+AGG | 0.511220 | 4.4:-7285509 | MS.gene49765:CDS |
| AGCCGCTTCTGTTGAGGAGT+AGG | 0.512649 | 4.4:+7286003 | None:intergenic |
| ACTTTGCAAGTGTGCTCGAA+AGG | 0.514114 | 4.4:+7285849 | None:intergenic |
| TTAGCACCATCAAGCCAATT+GGG | 0.517591 | 4.4:+7285798 | None:intergenic |
| AACAAGACTTATGGTACGAT+TGG | 0.522229 | 4.4:-7285971 | MS.gene49765:CDS |
| GAGTGGAACTGTTCCGGCCA+CGG | 0.525676 | 4.4:+7286029 | None:intergenic |
| TGGTCGAAGTTGAGAGATGA+AGG | 0.525737 | 4.4:+7286072 | None:intergenic |
| GAAGAGAGCCGCTTCTGTTG+AGG | 0.544198 | 4.4:+7285997 | None:intergenic |
| TACTGATGTGATGACATTTG+AGG | 0.549841 | 4.4:-7285542 | MS.gene49765:CDS |
| AATGCATTCTTCTGTGGCAG+AGG | 0.552048 | 4.4:+7286121 | None:intergenic |
| AATAGACAGGAGCCTGCCAA+TGG | 0.552630 | 4.4:+7285497 | None:intergenic |
| TTATGGTACGATTGGCCCAA+TGG | 0.556501 | 4.4:-7285963 | MS.gene49765:CDS |
| CTTTGCAAGTGTGCTCGAAA+GGG | 0.564893 | 4.4:+7285850 | None:intergenic |
| AAGTTGAGAGATGAAGGAAG+AGG | 0.569210 | 4.4:+7286078 | None:intergenic |
| CCATCAAGCCAATTGGGTCG+TGG | 0.576651 | 4.4:+7285804 | None:intergenic |
| ATAGACAGGAGCCTGCCAAT+GGG | 0.577912 | 4.4:+7285498 | None:intergenic |
| GTCCTACTCCTCAACAGAAG+CGG | 0.579821 | 4.4:-7286005 | MS.gene49765:CDS |
| AACCCCAAATACACAACAGA+AGG | 0.582352 | 4.4:-7285453 | MS.gene49765:CDS |
| TCGTAGAAGATCCACTTGAC+AGG | 0.590706 | 4.4:+7285681 | None:intergenic |
| TCACTAAAAGACCTGTCAAG+TGG | 0.590795 | 4.4:-7285692 | MS.gene49765:CDS |
| TATGACCTTGAATGGAACAA+TGG | 0.591932 | 4.4:-7285897 | MS.gene49765:CDS |
| GCCTTACTAAAACAATAGAC+AGG | 0.594404 | 4.4:+7285484 | None:intergenic |
| CATATTTGAGAACATCAAGC+TGG | 0.600302 | 4.4:+7285916 | None:intergenic |
| AGGGTCGAGAGTGTAGAGAA+AGG | 0.604953 | 4.4:+7285869 | None:intergenic |
| CAAACAAATGCATTCTTCTG+TGG | 0.604964 | 4.4:+7286115 | None:intergenic |
| CAGTACTGGATGATGCCCAT+TGG | 0.615897 | 4.4:-7285513 | MS.gene49765:CDS |
| CGCCGGAATTGGGTCCTCTG+TGG | 0.626171 | 4.4:+7286052 | None:intergenic |
| GATGTGATGACATTTGAGGT+TGG | 0.629445 | 4.4:-7285538 | MS.gene49765:CDS |
| GTCAAGTGGATCTTCTACGA+TGG | 0.629602 | 4.4:-7285678 | MS.gene49765:intron |
| AGGACCCAATTCCGGCGCCG+TGG | 0.635409 | 4.4:-7286046 | MS.gene49765:CDS |
| AAAGTGACTCAATATGATGT+TGG | 0.647948 | 4.4:-7285831 | MS.gene49765:CDS |
| TGTTGAGGAGTAGGACTGAG+TGG | 0.648618 | 4.4:+7286012 | None:intergenic |
| GTCGAGAGTGTAGAGAAAGG+TGG | 0.677328 | 4.4:+7285872 | None:intergenic |
| TCTCTCAACTTCGACCACAG+AGG | 0.720290 | 4.4:-7286066 | MS.gene49765:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTCATTATATGATGAT+TGG | - | chr4.4:7285922-7285941 | MS.gene49765:CDS | 15.0% |
| ! | AACATTACACAGAAAATTGT+CGG | + | chr4.4:7285751-7285770 | None:intergenic | 25.0% |
| ! | CTACATATAGCTAAAATTAC+TGG | - | chr4.4:7285876-7285895 | MS.gene49765:CDS | 25.0% |
| !! | ACAATTTTCTGTGTAATGTT+TGG | - | chr4.4:7285751-7285770 | MS.gene49765:CDS | 25.0% |
| !! | CAATTTTCTGTGTAATGTTT+GGG | - | chr4.4:7285752-7285771 | MS.gene49765:CDS | 25.0% |
| AAAGTGACTCAATATGATGT+TGG | - | chr4.4:7285672-7285691 | MS.gene49765:intron | 30.0% | |
| AATGTTGAAATTTCGTCCAT+TGG | + | chr4.4:7285559-7285578 | None:intergenic | 30.0% | |
| ATGTTGAAATTTCGTCCATT+GGG | + | chr4.4:7285558-7285577 | None:intergenic | 30.0% | |
| TTCTCAAATATGACCTTGAA+TGG | - | chr4.4:7285598-7285617 | MS.gene49765:intron | 30.0% | |
| !! | CTTGATGGTGCTAATTATTT+GGG | - | chr4.4:7285714-7285733 | MS.gene49765:CDS | 30.0% |
| !!! | CTATTGTTGATGATTTTCGT+TGG | - | chr4.4:7286101-7286120 | MS.gene49765:CDS | 30.0% |
| !!! | TCCTGTCTATTGTTTTAGTA+AGG | - | chr4.4:7286018-7286037 | MS.gene49765:CDS | 30.0% |
| AACAAGACTTATGGTACGAT+TGG | - | chr4.4:7285532-7285551 | MS.gene49765:CDS | 35.0% | |
| CAAACAAATGCATTCTTCTG+TGG | + | chr4.4:7285391-7285410 | None:intergenic | 35.0% | |
| CATATTTGAGAACATCAAGC+TGG | + | chr4.4:7285590-7285609 | None:intergenic | 35.0% | |
| CTCTTCGAAAACAAGACTTA+TGG | - | chr4.4:7285523-7285542 | MS.gene49765:CDS | 35.0% | |
| GCCTTACTAAAACAATAGAC+AGG | + | chr4.4:7286022-7286041 | None:intergenic | 35.0% | |
| GGGAGAAAGTCGAATTTATT+TGG | - | chr4.4:7285772-7285791 | MS.gene49765:CDS | 35.0% | |
| TACTGATGTGATGACATTTG+AGG | - | chr4.4:7285961-7285980 | MS.gene49765:CDS | 35.0% | |
| TATGACCTTGAATGGAACAA+TGG | - | chr4.4:7285606-7285625 | MS.gene49765:intron | 35.0% | |
| !! | GCTTGATGGTGCTAATTATT+TGG | - | chr4.4:7285713-7285732 | MS.gene49765:CDS | 35.0% |
| !!! | CTATTGTTTTAGTAAGGCTG+AGG | - | chr4.4:7286024-7286043 | MS.gene49765:CDS | 35.0% |
| AACCCCAAATACACAACAGA+AGG | - | chr4.4:7286050-7286069 | MS.gene49765:CDS | 40.0% | |
| AAGTTGAGAGATGAAGGAAG+AGG | + | chr4.4:7285428-7285447 | None:intergenic | 40.0% | |
| ATATGATGATTGGTGAGTGC+AGG | - | chr4.4:7285932-7285951 | MS.gene49765:CDS | 40.0% | |
| ATTAGCACCATCAAGCCAAT+TGG | + | chr4.4:7285709-7285728 | None:intergenic | 40.0% | |
| CTCCTTCTGTTGTGTATTTG+GGG | + | chr4.4:7286055-7286074 | None:intergenic | 40.0% | |
| GCTCCTTCTGTTGTGTATTT+GGG | + | chr4.4:7286056-7286075 | None:intergenic | 40.0% | |
| TCACTAAAAGACCTGTCAAG+TGG | - | chr4.4:7285811-7285830 | MS.gene49765:CDS | 40.0% | |
| TGAGAACATCAAGCTGGTAT+TGG | + | chr4.4:7285584-7285603 | None:intergenic | 40.0% | |
| TGCTCCTTCTGTTGTGTATT+TGG | + | chr4.4:7286057-7286076 | None:intergenic | 40.0% | |
| TTAGCACCATCAAGCCAATT+GGG | + | chr4.4:7285708-7285727 | None:intergenic | 40.0% | |
| ! | GATGTGATGACATTTGAGGT+TGG | - | chr4.4:7285965-7285984 | MS.gene49765:CDS | 40.0% |
| AATGCATTCTTCTGTGGCAG+AGG | + | chr4.4:7285385-7285404 | None:intergenic | 45.0% | |
| ACTTTGCAAGTGTGCTCGAA+AGG | + | chr4.4:7285657-7285676 | None:intergenic | 45.0% | |
| CTTTGCAAGTGTGCTCGAAA+GGG | + | chr4.4:7285656-7285675 | None:intergenic | 45.0% | |
| GTCAAGTGGATCTTCTACGA+TGG | - | chr4.4:7285825-7285844 | MS.gene49765:CDS | 45.0% | |
| TCGTAGAAGATCCACTTGAC+AGG | + | chr4.4:7285825-7285844 | None:intergenic | 45.0% | |
| TGGTCGAAGTTGAGAGATGA+AGG | + | chr4.4:7285434-7285453 | None:intergenic | 45.0% | |
| TTGGTATTCCACGACCCAAT+TGG | - | chr4.4:7285691-7285710 | MS.gene49765:CDS | 45.0% | |
| ! | ATTTGAGGTTGGAGCAGTAC+TGG | - | chr4.4:7285976-7285995 | MS.gene49765:CDS | 45.0% |
| ! | TTATGGTACGATTGGCCCAA+TGG | - | chr4.4:7285540-7285559 | MS.gene49765:CDS | 45.0% |
| !! | TGGTGCCATTGTTCCATTCA+AGG | + | chr4.4:7285614-7285633 | None:intergenic | 45.0% |
| AATAGACAGGAGCCTGCCAA+TGG | + | chr4.4:7286009-7286028 | None:intergenic | 50.0% | |
| AGGACTGAGTGGAACTGTTC+CGG | + | chr4.4:7285483-7285502 | None:intergenic | 50.0% | |
| ATAGACAGGAGCCTGCCAAT+GGG | + | chr4.4:7286008-7286027 | None:intergenic | 50.0% | |
| GTCCTACTCCTCAACAGAAG+CGG | - | chr4.4:7285498-7285517 | MS.gene49765:CDS | 50.0% | |
| TCTCTCAACTTCGACCACAG+AGG | - | chr4.4:7285437-7285456 | MS.gene49765:CDS | 50.0% | |
| TGTTGAGGAGTAGGACTGAG+TGG | + | chr4.4:7285494-7285513 | None:intergenic | 50.0% | |
| ! | AGGGTCGAGAGTGTAGAGAA+AGG | + | chr4.4:7285637-7285656 | None:intergenic | 50.0% |
| ! | CAGTACTGGATGATGCCCAT+TGG | - | chr4.4:7285990-7286009 | MS.gene49765:CDS | 50.0% |
| ! | GTCGAGAGTGTAGAGAAAGG+TGG | + | chr4.4:7285634-7285653 | None:intergenic | 50.0% |
| ACTGGATGATGCCCATTGGC+AGG | - | chr4.4:7285994-7286013 | MS.gene49765:CDS | 55.0% | |
| AGCCGCTTCTGTTGAGGAGT+AGG | + | chr4.4:7285503-7285522 | None:intergenic | 55.0% | |
| CCATCAAGCCAATTGGGTCG+TGG | + | chr4.4:7285702-7285721 | None:intergenic | 55.0% | |
| GAAGAGAGCCGCTTCTGTTG+AGG | + | chr4.4:7285509-7285528 | None:intergenic | 55.0% | |
| GACCACAGAGGACCCAATTC+CGG | - | chr4.4:7285449-7285468 | MS.gene49765:CDS | 55.0% | |
| !! | CCACGACCCAATTGGCTTGA+TGG | - | chr4.4:7285699-7285718 | MS.gene49765:CDS | 55.0% |
| GAGTGGAACTGTTCCGGCCA+CGG | + | chr4.4:7285477-7285496 | None:intergenic | 60.0% | |
| CGCCGGAATTGGGTCCTCTG+TGG | + | chr4.4:7285454-7285473 | None:intergenic | 65.0% | |
| AACTGTTCCGGCCACGGCGC+CGG | + | chr4.4:7285471-7285490 | None:intergenic | 70.0% | |
| AGGACCCAATTCCGGCGCCG+TGG | - | chr4.4:7285457-7285476 | MS.gene49765:CDS | 70.0% | |
| CCCAATTCCGGCGCCGTGGC+CGG | - | chr4.4:7285461-7285480 | MS.gene49765:CDS | 75.0% | |
| ! | CCGGCCACGGCGCCGGAATT+GGG | + | chr4.4:7285464-7285483 | None:intergenic | 75.0% |
| ! | TCCGGCCACGGCGCCGGAAT+TGG | + | chr4.4:7285465-7285484 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7285378 | 7286147 | 7285378 | ID=MS.gene49765 |
| chr4.4 | mRNA | 7285378 | 7286147 | 7285378 | ID=MS.gene49765.t1;Parent=MS.gene49765 |
| chr4.4 | exon | 7285679 | 7286147 | 7285679 | ID=MS.gene49765.t1.exon1;Parent=MS.gene49765.t1 |
| chr4.4 | CDS | 7285679 | 7286147 | 7285679 | ID=cds.MS.gene49765.t1;Parent=MS.gene49765.t1 |
| chr4.4 | exon | 7285378 | 7285571 | 7285378 | ID=MS.gene49765.t1.exon2;Parent=MS.gene49765.t1 |
| chr4.4 | CDS | 7285378 | 7285571 | 7285378 | ID=cds.MS.gene49765.t1;Parent=MS.gene49765.t1 |
| Gene Sequence |
| Protein sequence |
