Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78945.t1 | XP_003612831.1 | 98.9 | 377 | 4 | 0 | 1 | 377 | 1 | 377 | 1.10E-210 | 742.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78945.t1 | O82290 | 61.8 | 380 | 134 | 4 | 3 | 371 | 2 | 381 | 6.2e-125 | 448.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78945.t1 | G7KCE4 | 98.9 | 377 | 4 | 0 | 1 | 377 | 1 | 377 | 8.2e-211 | 742.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene78945 | 0.846729 | 1.81E-59 | -1.69E-46 |
| MS.gene049171 | MS.gene78945 | 0.843404 | 1.43E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene78945 | 0.832116 | 1.14E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene78945 | 0.814789 | 1.29E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene78945 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene78945 | 0.817717 | 2.85E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene78945 | 0.81039 | 1.18E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene78945 | 0.802281 | 6.04E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene78945 | 0.827968 | 1.17E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene78945 | 0.810256 | 1.26E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene78945 | 0.847665 | 1.00E-59 | -1.69E-46 |
| MS.gene050699 | MS.gene78945 | 0.823132 | 1.63E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene78945 | 0.85223 | 5.29E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene78945 | 0.806359 | 8.55E-50 | -1.69E-46 |
| MS.gene050781 | MS.gene78945 | 0.862713 | 4.17E-64 | -1.69E-46 |
| MS.gene050783 | MS.gene78945 | 0.804842 | 1.78E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene78945 | 0.835145 | 1.99E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene78945 | 0.860329 | 2.23E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene78945 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene78945 | 0.815512 | 8.90E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene78945 | 0.814498 | 1.49E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene78945 | 0.813029 | 3.15E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene78945 | 0.808596 | 2.87E-50 | -1.69E-46 |
| MS.gene052501 | MS.gene78945 | 0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene78945 | 0.817907 | 2.58E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene78945 | 0.82486 | 6.42E-54 | -1.69E-46 |
| MS.gene052670 | MS.gene78945 | 0.819902 | 9.10E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene78945 | 0.816616 | 5.04E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene78945 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene78945 | 0.80288 | 4.55E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene78945 | 0.828322 | 9.59E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene78945 | 0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene78945 | 0.824957 | 6.09E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene78945 | 0.80563 | 1.22E-49 | -1.69E-46 |
| MS.gene053579 | MS.gene78945 | 0.819442 | 1.16E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene78945 | 0.830658 | 2.59E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene78945 | 0.809474 | 1.86E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene78945 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene78945 | 0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene78945 | 0.833045 | 6.68E-56 | -1.69E-46 |
| MS.gene054927 | MS.gene78945 | 0.852246 | 5.23E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene78945 | 0.825545 | 4.42E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene78945 | 0.816725 | 4.77E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene78945 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene78945 | 0.812541 | 4.03E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene78945 | 0.827268 | 1.72E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene78945 | 0.834291 | 3.26E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene78945 | 0.806724 | 7.16E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene78945 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene057196 | MS.gene78945 | 0.807244 | 5.56E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene78945 | 0.827136 | 1.85E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene78945 | 0.850999 | 1.18E-60 | -1.69E-46 |
| MS.gene057831 | MS.gene78945 | 0.858411 | 8.39E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene78945 | 0.817374 | 3.41E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene78945 | 0.83855 | 2.69E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene78945 | 0.864553 | 1.12E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene78945 | 0.816064 | 6.70E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene78945 | 0.821573 | 3.76E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene78945 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene05914 | MS.gene78945 | 0.805406 | 1.36E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene78945 | 0.801875 | 7.33E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene78945 | 0.829303 | 5.55E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene78945 | 0.831446 | 1.66E-55 | -1.69E-46 |
| MS.gene059756 | MS.gene78945 | 0.829255 | 5.70E-55 | -1.69E-46 |
| MS.gene060675 | MS.gene78945 | 0.808391 | 3.17E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene78945 | 0.83283 | 7.56E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene78945 | 0.857941 | 1.16E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene78945 | 0.859374 | 4.32E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78945.t1 | MTR_5g029550 | 98.939 | 377 | 4 | 0 | 1 | 377 | 1 | 377 | 0.0 | 765 |
| MS.gene78945.t1 | MTR_5g029550 | 98.592 | 284 | 4 | 0 | 1 | 284 | 1 | 284 | 0.0 | 571 |
| MS.gene78945.t1 | MTR_5g029550 | 98.347 | 242 | 4 | 0 | 1 | 242 | 1 | 242 | 2.61e-173 | 482 |
| MS.gene78945.t1 | MTR_1g009450 | 76.190 | 126 | 10 | 1 | 219 | 344 | 13 | 118 | 5.05e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78945.t1 | AT2G35500 | 65.029 | 346 | 115 | 2 | 26 | 371 | 42 | 381 | 6.48e-158 | 449 |
Find 88 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCTCTTCAGCCACTTTA+TGG | 0.119123 | 5.3:-18506978 | None:intergenic |
| GAACGAAGTGAGTTGAAATT+TGG | 0.220360 | 5.3:-18506121 | None:intergenic |
| CTGGAAGTTTCTTGTCTGAT+AGG | 0.299443 | 5.3:-18509085 | None:intergenic |
| GTTTCACCACCTTCACTTGA+TGG | 0.305523 | 5.3:-18509708 | None:intergenic |
| TTTATGCAGGATTTACTGTT+TGG | 0.310413 | 5.3:+18508382 | MS.gene78945:CDS |
| TCGTAAGTTGTGGTGGAAAC+AGG | 0.339571 | 5.3:-18506217 | None:intergenic |
| TGAAGAGCTTGCTACTGGTC+TGG | 0.344091 | 5.3:+18506990 | MS.gene78945:CDS |
| GAAGAGCTTGCTACTGGTCT+GGG | 0.347927 | 5.3:+18506991 | MS.gene78945:CDS |
| TTAAACCCTCGGAAACAATA+TGG | 0.358216 | 5.3:+18506705 | MS.gene78945:CDS |
| GGCAGTGAAGGAGCATTTGC+AGG | 0.372222 | 5.3:-18506194 | None:intergenic |
| CTATCAGACAAGAAACTTCC+AGG | 0.381417 | 5.3:+18509086 | MS.gene78945:CDS |
| CTGCTGGAAGATCTGATAAA+TGG | 0.382309 | 5.3:+18508352 | MS.gene78945:CDS |
| AAGTACAGTGCCTTCGCCTT+CGG | 0.393292 | 5.3:-18508179 | None:intergenic |
| ATGGAGTTAAGATTAAATAT+AGG | 0.407883 | 5.3:+18506557 | MS.gene78945:CDS |
| ATTGAGAAAATAACGATGAA+TGG | 0.409404 | 5.3:-18506150 | None:intergenic |
| AGGGCAGCAGTTGCAACATT+AGG | 0.414670 | 5.3:+18508315 | MS.gene78945:CDS |
| TCACCACTCCCGCTGCTCTC+AGG | 0.440859 | 5.3:+18506041 | MS.gene78945:CDS |
| AAAATGATCCCGAGTTGAAA+TGG | 0.441420 | 5.3:+18506857 | MS.gene78945:CDS |
| GGAGGTAAACATGGTGCTGC+TGG | 0.447752 | 5.3:+18508336 | MS.gene78945:CDS |
| TTGAGAAAATAACGATGAAT+GGG | 0.450204 | 5.3:-18506149 | None:intergenic |
| AGTGCTCTGCTAGTCATGTA+AGG | 0.451996 | 5.3:+18508295 | MS.gene78945:intron |
| ACTTACATGAATCCACAGTT+TGG | 0.453144 | 5.3:-18507230 | None:intergenic |
| GACATCCCAATCTTATGTAT+AGG | 0.456670 | 5.3:-18509647 | None:intergenic |
| GGCCTGACATCATGGAATCA+TGG | 0.458410 | 5.3:+18506878 | MS.gene78945:CDS |
| AGATGTGGTTGTGAAATTAC+AGG | 0.459192 | 5.3:+18508998 | MS.gene78945:CDS |
| GGAAGAAACCTGAGAGCAGC+GGG | 0.467446 | 5.3:-18506049 | None:intergenic |
| ATTAGTGTCTATCAACGTAA+TGG | 0.470764 | 5.3:-18506666 | None:intergenic |
| TTAGTGTCTATCAACGTAAT+GGG | 0.472184 | 5.3:-18506665 | None:intergenic |
| TCATGGGAATCACTTGCTGC+TGG | 0.474008 | 5.3:+18506895 | MS.gene78945:CDS |
| TCCCATGATTCCATGATGTC+AGG | 0.474648 | 5.3:-18506880 | None:intergenic |
| GAGCATTTGCAGGGAGAAAG+AGG | 0.479003 | 5.3:-18506184 | None:intergenic |
| AAAAGCCTATACATAAGATT+GGG | 0.479493 | 5.3:+18509642 | MS.gene78945:CDS |
| GATTGGGATGTCGTGGTGAT+TGG | 0.488854 | 5.3:+18509658 | MS.gene78945:CDS |
| TTTCTGGTTGTGGGATTTGG+AGG | 0.494317 | 5.3:-18506070 | None:intergenic |
| AAATGGCGACATCTTTATGC+AGG | 0.496184 | 5.3:+18508369 | MS.gene78945:CDS |
| TTATGCTAAAAGTGTGGCAC+AGG | 0.496935 | 5.3:+18509034 | MS.gene78945:CDS |
| AAACCTGAGAGCAGCGGGAG+TGG | 0.498023 | 5.3:-18506044 | None:intergenic |
| TCACTTGATGGATCCCAACC+AGG | 0.504453 | 5.3:-18509696 | None:intergenic |
| TTCTGATAATGCTTCAGAGA+TGG | 0.507023 | 5.3:+18506538 | MS.gene78945:CDS |
| AAGAAGCACAAAAGACATAT+CGG | 0.507065 | 5.3:+18506592 | MS.gene78945:CDS |
| GCCTGACATCATGGAATCAT+GGG | 0.510245 | 5.3:+18506879 | MS.gene78945:CDS |
| CACTGAAATCAACCATAAAG+TGG | 0.512784 | 5.3:+18506966 | MS.gene78945:CDS |
| AAGATTAAATATAGGAAGCA+TGG | 0.513771 | 5.3:+18506565 | MS.gene78945:CDS |
| GTGGCTGAAGAGCTTGCTAC+TGG | 0.517891 | 5.3:+18506985 | MS.gene78945:CDS |
| GGAACATCAATCTATCTTGT+CGG | 0.520634 | 5.3:+18506937 | MS.gene78945:CDS |
| ATTCCAGGGCTGCTTGCTGA+AGG | 0.526249 | 5.3:+18508142 | MS.gene78945:intron |
| CGTAAGTTGTGGTGGAAACA+GGG | 0.526645 | 5.3:-18506216 | None:intergenic |
| GTTGAAATGGCCTGACATCA+TGG | 0.528159 | 5.3:+18506870 | MS.gene78945:CDS |
| CACTTTATGGTTGATTTCAG+TGG | 0.529748 | 5.3:-18506965 | None:intergenic |
| AGGAAGAAACCTGAGAGCAG+CGG | 0.533503 | 5.3:-18506050 | None:intergenic |
| ACATGAATCCACAGTTTGGT+TGG | 0.537166 | 5.3:-18507226 | None:intergenic |
| CACAAACCATATTGTTTCCG+AGG | 0.544173 | 5.3:-18506711 | None:intergenic |
| TTGTCACAGACTGAAGCATC+AGG | 0.554748 | 5.3:+18508405 | MS.gene78945:CDS |
| GGTGGAAACAGGGGCAGTGA+AGG | 0.554825 | 5.3:-18506206 | None:intergenic |
| AGTGAAGGTGGTGAAACTCT+TGG | 0.556988 | 5.3:+18509714 | MS.gene78945:CDS |
| GCAGCAGTTGCAACATTAGG+AGG | 0.571731 | 5.3:+18508318 | MS.gene78945:CDS |
| ATGTCAGGCCATTTCAACTC+GGG | 0.582362 | 5.3:-18506865 | None:intergenic |
| CACTTGATGGATCCCAACCA+GGG | 0.588545 | 5.3:-18509695 | None:intergenic |
| AAGTACCTCGTAAGTTGTGG+TGG | 0.588574 | 5.3:-18506224 | None:intergenic |
| TACATAAGATTGGGATGTCG+TGG | 0.592456 | 5.3:+18509651 | MS.gene78945:CDS |
| CTGTACTTGAAAGCATAAGT+AGG | 0.593080 | 5.3:+18508194 | MS.gene78945:CDS |
| GATGTCAGGCCATTTCAACT+CGG | 0.596436 | 5.3:-18506866 | None:intergenic |
| AGATGAAGATTCAGCAAGGG+AGG | 0.603993 | 5.3:+18508929 | MS.gene78945:intron |
| AAGAGCTTGCTACTGGTCTG+GGG | 0.608924 | 5.3:+18506992 | MS.gene78945:CDS |
| AGTAAGTACCTCGTAAGTTG+TGG | 0.609430 | 5.3:-18506227 | None:intergenic |
| GACTCAGTAGCCGAAGGCGA+AGG | 0.609903 | 5.3:+18508169 | MS.gene78945:CDS |
| GCAGTGAAGGAGCATTTGCA+GGG | 0.610757 | 5.3:-18506193 | None:intergenic |
| GGTTGTGAAATTACAGGGAT+GGG | 0.612080 | 5.3:+18509004 | MS.gene78945:CDS |
| TGTTTCCACCACAACTTACG+AGG | 0.616074 | 5.3:+18506219 | MS.gene78945:CDS |
| AGCATTTGCAGGGAGAAAGA+GGG | 0.616324 | 5.3:-18506183 | None:intergenic |
| GTGCTCTGCTAGTCATGTAA+GGG | 0.626183 | 5.3:+18508296 | MS.gene78945:intron |
| ACAAACCATATTGTTTCCGA+GGG | 0.626224 | 5.3:-18506710 | None:intergenic |
| AACTTATTCCAACCAAACTG+TGG | 0.626590 | 5.3:+18507218 | MS.gene78945:CDS |
| TACAGATGAAGATTCAGCAA+GGG | 0.627827 | 5.3:+18508926 | MS.gene78945:intron |
| GGTTGGGATCCATCAAGTGA+AGG | 0.641352 | 5.3:+18509699 | MS.gene78945:CDS |
| TGGTTGTGAAATTACAGGGA+TGG | 0.647286 | 5.3:+18509003 | MS.gene78945:CDS |
| GGTTCTGACTCAGTAGCCGA+AGG | 0.651113 | 5.3:+18508163 | MS.gene78945:CDS |
| TCCTGCTTATGCTAAAAGTG+TGG | 0.654346 | 5.3:+18509028 | MS.gene78945:CDS |
| TGCATATACGAATGCAGATG+TGG | 0.657277 | 5.3:+18508983 | MS.gene78945:CDS |
| TATAGATGATGATCATCTTG+TGG | 0.662960 | 5.3:+18506822 | MS.gene78945:CDS |
| ATACAGATGAAGATTCAGCA+AGG | 0.667293 | 5.3:+18508925 | MS.gene78945:intron |
| CTTGATGGATCCCAACCAGG+GGG | 0.667634 | 5.3:-18509693 | None:intergenic |
| ACTTGATGGATCCCAACCAG+GGG | 0.672298 | 5.3:-18509694 | None:intergenic |
| GTAAGTTGTGGTGGAAACAG+GGG | 0.682098 | 5.3:-18506215 | None:intergenic |
| GCAACATTAGGAGGTAAACA+TGG | 0.688881 | 5.3:+18508327 | MS.gene78945:CDS |
| TGGGATCCATCAAGTGAAGG+TGG | 0.694285 | 5.3:+18509702 | MS.gene78945:CDS |
| GATGTGGTTGTGAAATTACA+GGG | 0.701042 | 5.3:+18508999 | MS.gene78945:CDS |
| TATGCTAAAAGTGTGGCACA+GGG | 0.729528 | 5.3:+18509035 | MS.gene78945:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATAGAAAAAGAAAT+TGG | - | chr5.3:18506438-18506457 | None:intergenic | 10.0% |
| !!! | AATTTATTCATTTAATTTTC+TGG | + | chr5.3:18508223-18508242 | MS.gene78945:intron | 10.0% |
| !!! | ATTTTAGTTGATATATTATT+TGG | + | chr5.3:18508430-18508449 | MS.gene78945:intron | 10.0% |
| !! | GCAAAAATATATCAAAATAT+TGG | - | chr5.3:18507833-18507852 | None:intergenic | 15.0% |
| !! | TCTAATTATCAATATTCATA+AGG | + | chr5.3:18507037-18507056 | MS.gene78945:intron | 15.0% |
| !!! | ATTTTAAACTACGTTAAAAA+TGG | + | chr5.3:18506736-18506755 | MS.gene78945:intron | 15.0% |
| !!! | CTTTTTATAATTTGATCTTT+TGG | + | chr5.3:18506460-18506479 | MS.gene78945:intron | 15.0% |
| !!! | TTTGTTTTTATGATTTATTC+AGG | - | chr5.3:18507966-18507985 | None:intergenic | 15.0% |
| !! | AAATGATTCAAGAAAAATGA+TGG | - | chr5.3:18507715-18507734 | None:intergenic | 20.0% |
| !! | ATGGAGTTAAGATTAAATAT+AGG | + | chr5.3:18506557-18506576 | MS.gene78945:CDS | 20.0% |
| !! | TAATATTACAATAGAACTCT+AGG | + | chr5.3:18507393-18507412 | MS.gene78945:intron | 20.0% |
| !!! | AATTGGTTTTAGTTGAAAAT+TGG | + | chr5.3:18506377-18506396 | MS.gene78945:intron | 20.0% |
| !!! | ATTGAGAAATCAAACATTTT+TGG | + | chr5.3:18506284-18506303 | MS.gene78945:intron | 20.0% |
| !!! | TTGTTGGAAATTTTTCAAAA+CGG | + | chr5.3:18508632-18508651 | MS.gene78945:intron | 20.0% |
| !!! | TTTTGAAAAATTTCCAACAA+AGG | - | chr5.3:18508632-18508651 | None:intergenic | 20.0% |
| ! | AAAAAGCCTATACATAAGAT+TGG | + | chr5.3:18509641-18509660 | MS.gene78945:CDS | 25.0% |
| ! | AAAAGCCTATACATAAGATT+GGG | + | chr5.3:18509642-18509661 | MS.gene78945:CDS | 25.0% |
| ! | AAGATTAAATATAGGAAGCA+TGG | + | chr5.3:18506565-18506584 | MS.gene78945:CDS | 25.0% |
| ! | ATAAAATTTCTTCGAGTCAA+GGG | - | chr5.3:18508540-18508559 | None:intergenic | 25.0% |
| ! | ATCAGTTTGACTCTAATTTA+AGG | + | chr5.3:18507466-18507485 | MS.gene78945:intron | 25.0% |
| ! | ATTGAGAAAATAACGATGAA+TGG | - | chr5.3:18506153-18506172 | None:intergenic | 25.0% |
| ! | ATTTGTACATTACAAACAGT+AGG | - | chr5.3:18506266-18506285 | None:intergenic | 25.0% |
| ! | CAAAGATATGTTACAAATTG+AGG | + | chr5.3:18507635-18507654 | MS.gene78945:intron | 25.0% |
| ! | GATTATCCATATGCTAAAAT+AGG | - | chr5.3:18507546-18507565 | None:intergenic | 25.0% |
| ! | GTTAATACACTGCAATATAT+AGG | - | chr5.3:18508110-18508129 | None:intergenic | 25.0% |
| ! | TCTAAATGTACCTTCTATAT+AGG | + | chr5.3:18509516-18509535 | MS.gene78945:intron | 25.0% |
| ! | TGAATGTCATAAACTAAAAC+TGG | + | chr5.3:18509430-18509449 | MS.gene78945:intron | 25.0% |
| ! | TGACATTCATTAAGTTTCAT+AGG | - | chr5.3:18509419-18509438 | None:intergenic | 25.0% |
| ! | TTGAGAAAATAACGATGAAT+GGG | - | chr5.3:18506152-18506171 | None:intergenic | 25.0% |
| !! | AATTTAAGGTACTACCTAAA+AGG | + | chr5.3:18507480-18507499 | MS.gene78945:intron | 25.0% |
| !! | ATACTAATATCTTTCGAGTA+GGG | - | chr5.3:18508003-18508022 | None:intergenic | 25.0% |
| !! | TGAGTTTGATTTATAACTGA+TGG | + | chr5.3:18506487-18506506 | MS.gene78945:intron | 25.0% |
| !! | TGATAGGATTAACTGTTTTA+GGG | - | chr5.3:18509072-18509091 | None:intergenic | 25.0% |
| !!! | AATAACTCTAAGATAAACCT+CGG | - | chr5.3:18507933-18507952 | None:intergenic | 25.0% |
| !!! | AATTGGTTTTGGTTGAAAAT+TGG | + | chr5.3:18506360-18506379 | MS.gene78945:intron | 25.0% |
| !!! | TTTGATATATTTTTGCGAGT+TGG | + | chr5.3:18507837-18507856 | MS.gene78945:intron | 25.0% |
| AACAAATGTAATCGTATTCC+AGG | + | chr5.3:18508127-18508146 | MS.gene78945:intron | 30.0% | |
| AAGTGAGAAAACTAAACAAG+GGG | + | chr5.3:18508676-18508695 | MS.gene78945:intron | 30.0% | |
| ACAAATGTAATCGTATTCCA+GGG | + | chr5.3:18508128-18508147 | MS.gene78945:intron | 30.0% | |
| AGAAGTGAGAAAACTAAACA+AGG | + | chr5.3:18508674-18508693 | MS.gene78945:intron | 30.0% | |
| AGTCAAAGTAACACACATAA+CGG | - | chr5.3:18507613-18507632 | None:intergenic | 30.0% | |
| ATGATTGAATCAACCTTTGT+TGG | + | chr5.3:18508616-18508635 | MS.gene78945:intron | 30.0% | |
| ATTAATATCCCTGACAATGT+TGG | - | chr5.3:18507880-18507899 | None:intergenic | 30.0% | |
| ATTAGTGTCTATCAACGTAA+TGG | - | chr5.3:18506669-18506688 | None:intergenic | 30.0% | |
| CCTTCTATATAGGATGAAAA+TGG | + | chr5.3:18509526-18509545 | MS.gene78945:intron | 30.0% | |
| CTACTCGAAAGATATTAGTA+TGG | + | chr5.3:18508002-18508021 | MS.gene78945:intron | 30.0% | |
| CTAGTAAGAGACATTACTAT+AGG | - | chr5.3:18507435-18507454 | None:intergenic | 30.0% | |
| GAAAATGGAGACTGAAAATA+AGG | + | chr5.3:18509541-18509560 | MS.gene78945:intron | 30.0% | |
| GAAGTGAGAAAACTAAACAA+GGG | + | chr5.3:18508675-18508694 | MS.gene78945:intron | 30.0% | |
| GATAAAATTTCTTCGAGTCA+AGG | - | chr5.3:18508541-18508560 | None:intergenic | 30.0% | |
| GGAGAAATAATTATGTGAAG+TGG | + | chr5.3:18507070-18507089 | MS.gene78945:intron | 30.0% | |
| TATAGATGATGATCATCTTG+TGG | + | chr5.3:18506822-18506841 | MS.gene78945:CDS | 30.0% | |
| TATGCTAAAATAGGCAGAAT+TGG | - | chr5.3:18507537-18507556 | None:intergenic | 30.0% | |
| TCAAAACAAGATTGGACTAT+TGG | - | chr5.3:18508488-18508507 | None:intergenic | 30.0% | |
| TCATTACAAAGATTGTGTGT+TGG | + | chr5.3:18508559-18508578 | MS.gene78945:intron | 30.0% | |
| TGGTTGAATGGTTATGATTT+GGG | + | chr5.3:18506793-18506812 | MS.gene78945:intron | 30.0% | |
| TTAGTGTCTATCAACGTAAT+GGG | - | chr5.3:18506668-18506687 | None:intergenic | 30.0% | |
| TTCAAGGTTCAAAACAAGAT+TGG | - | chr5.3:18508496-18508515 | None:intergenic | 30.0% | |
| TTTAATGTTCATCTCTTCTC+AGG | + | chr5.3:18507163-18507182 | MS.gene78945:intron | 30.0% | |
| TTTATGCAGGATTTACTGTT+TGG | + | chr5.3:18508382-18508401 | MS.gene78945:CDS | 30.0% | |
| ! | AACAAAGGTTGATTCAATCA+TGG | - | chr5.3:18508617-18508636 | None:intergenic | 30.0% |
| ! | AAGAAGCACAAAAGACATAT+CGG | + | chr5.3:18506592-18506611 | MS.gene78945:CDS | 30.0% |
| ! | AGTAACTCTTTTGTACTTAG+TGG | - | chr5.3:18507195-18507214 | None:intergenic | 30.0% |
| ! | CATACTAATATCTTTCGAGT+AGG | - | chr5.3:18508004-18508023 | None:intergenic | 30.0% |
| ! | CATTTCGTTAAGAGTATGTT+TGG | + | chr5.3:18509252-18509271 | MS.gene78945:intron | 30.0% |
| ! | CCATTTTCATCCTATATAGA+AGG | - | chr5.3:18509529-18509548 | None:intergenic | 30.0% |
| ! | CTGATAGGATTAACTGTTTT+AGG | - | chr5.3:18509073-18509092 | None:intergenic | 30.0% |
| ! | GAAGAAGTTGAATGTTTTTC+TGG | - | chr5.3:18506089-18506108 | None:intergenic | 30.0% |
| ! | GCTCAAGATTTTATGTCATA+AGG | + | chr5.3:18509464-18509483 | MS.gene78945:intron | 30.0% |
| !! | ATAACTCTAAGATAAACCTC+GGG | - | chr5.3:18507932-18507951 | None:intergenic | 30.0% |
| !! | CAGAAGTTTGATGTTTTAAG+GGG | - | chr5.3:18509206-18509225 | None:intergenic | 30.0% |
| !! | CCAGAAGTTTGATGTTTTAA+GGG | - | chr5.3:18509207-18509226 | None:intergenic | 30.0% |
| !! | GAAATTTTTCAAAACGGTGT+GGG | + | chr5.3:18508638-18508657 | MS.gene78945:intron | 30.0% |
| !!! | ATTCTGCCTATTTTAGCATA+TGG | + | chr5.3:18507537-18507556 | MS.gene78945:intron | 30.0% |
| !!! | GCATCTTGTTTTAGTATAAG+AGG | + | chr5.3:18508029-18508048 | MS.gene78945:intron | 30.0% |
| !!! | TGTTTTAGTATAAGAGGACA+TGG | + | chr5.3:18508035-18508054 | MS.gene78945:intron | 30.0% |
| !!! | TTGAATGTTTTTCTGGTTGT+GGG | - | chr5.3:18506082-18506101 | None:intergenic | 30.0% |
| AACTTATTCCAACCAAACTG+TGG | + | chr5.3:18507218-18507237 | MS.gene78945:CDS | 35.0% | |
| AATAAATCAGCACAACTACC+TGG | - | chr5.3:18509107-18509126 | None:intergenic | 35.0% | |
| AATCTTAGATTTGCAACCCT+GGG | + | chr5.3:18507897-18507916 | MS.gene78945:intron | 35.0% | |
| AATGTTGCTAAGTGTGTGTT+TGG | + | chr5.3:18506322-18506341 | MS.gene78945:intron | 35.0% | |
| ACAAACCATATTGTTTCCGA+GGG | - | chr5.3:18506713-18506732 | None:intergenic | 35.0% | |
| ACAAAGATTGTGTGTTGGAT+GGG | + | chr5.3:18508564-18508583 | MS.gene78945:intron | 35.0% | |
| ACAAATTGAGGAACCAAATC+TGG | + | chr5.3:18507647-18507666 | MS.gene78945:intron | 35.0% | |
| ACTCAAACAGTCAAATGGAT+TGG | - | chr5.3:18509158-18509177 | None:intergenic | 35.0% | |
| ACTTACATGAATCCACAGTT+TGG | - | chr5.3:18507233-18507252 | None:intergenic | 35.0% | |
| AGATGTGGTTGTGAAATTAC+AGG | + | chr5.3:18508998-18509017 | MS.gene78945:CDS | 35.0% | |
| ATACAGATGAAGATTCAGCA+AGG | + | chr5.3:18508925-18508944 | MS.gene78945:intron | 35.0% | |
| ATATAGGATTTAAGCGACTG+AGG | - | chr5.3:18508094-18508113 | None:intergenic | 35.0% | |
| ATGAATTTCATCAACGACAG+AGG | - | chr5.3:18507682-18507701 | None:intergenic | 35.0% | |
| ATGTTGGCAAAGTTCACTTA+TGG | - | chr5.3:18507864-18507883 | None:intergenic | 35.0% | |
| CACTGAAATCAACCATAAAG+TGG | + | chr5.3:18506966-18506985 | MS.gene78945:CDS | 35.0% | |
| CCCTTAAAACATCAAACTTC+TGG | + | chr5.3:18509204-18509223 | MS.gene78945:intron | 35.0% | |
| GACATCCCAATCTTATGTAT+AGG | - | chr5.3:18509650-18509669 | None:intergenic | 35.0% | |
| GAGGAAGAAAAAACCAGATT+TGG | - | chr5.3:18507663-18507682 | None:intergenic | 35.0% | |
| GATGTGGTTGTGAAATTACA+GGG | + | chr5.3:18508999-18509018 | MS.gene78945:CDS | 35.0% | |
| GGAACATCAATCTATCTTGT+CGG | + | chr5.3:18506937-18506956 | MS.gene78945:CDS | 35.0% | |
| GGTTTAATCCTGTCAAAAAG+AGG | - | chr5.3:18506692-18506711 | None:intergenic | 35.0% | |
| GTGGTTGAATGGTTATGATT+TGG | + | chr5.3:18506792-18506811 | MS.gene78945:intron | 35.0% | |
| TAATCTTAGATTTGCAACCC+TGG | + | chr5.3:18507896-18507915 | MS.gene78945:intron | 35.0% | |
| TACAAAGATTGTGTGTTGGA+TGG | + | chr5.3:18508563-18508582 | MS.gene78945:intron | 35.0% | |
| TACAGATGAAGATTCAGCAA+GGG | + | chr5.3:18508926-18508945 | MS.gene78945:intron | 35.0% | |
| TATGGATAATCAGTGTCACA+TGG | + | chr5.3:18507555-18507574 | MS.gene78945:intron | 35.0% | |
| TATTCATAAGGCTCGTAACT+AGG | + | chr5.3:18507049-18507068 | MS.gene78945:intron | 35.0% | |
| TCATAACCATTCAACCACAA+AGG | - | chr5.3:18506790-18506809 | None:intergenic | 35.0% | |
| TGACTACTCAAACAGTCAAA+TGG | - | chr5.3:18509163-18509182 | None:intergenic | 35.0% | |
| TTAAACCCTCGGAAACAATA+TGG | + | chr5.3:18506705-18506724 | MS.gene78945:CDS | 35.0% | |
| ! | AAAATGATCCCGAGTTGAAA+TGG | + | chr5.3:18506857-18506876 | MS.gene78945:CDS | 35.0% |
| ! | ACACTAATCCTCTTTTTGAC+AGG | + | chr5.3:18506681-18506700 | MS.gene78945:CDS | 35.0% |
| ! | CACTTTATGGTTGATTTCAG+TGG | - | chr5.3:18506968-18506987 | None:intergenic | 35.0% |
| ! | CTGTACTTGAAAGCATAAGT+AGG | + | chr5.3:18508194-18508213 | MS.gene78945:CDS | 35.0% |
| ! | GAACGAAGTGAGTTGAAATT+TGG | - | chr5.3:18506124-18506143 | None:intergenic | 35.0% |
| ! | GCCAGAAGTTTGATGTTTTA+AGG | - | chr5.3:18509208-18509227 | None:intergenic | 35.0% |
| ! | TCTGTCGTTGATGAAATTCA+TGG | + | chr5.3:18507681-18507700 | MS.gene78945:intron | 35.0% |
| ! | TGGAATTTTGAACCGTAGTT+TGG | + | chr5.3:18506756-18506775 | MS.gene78945:intron | 35.0% |
| ! | TTCTGATAATGCTTCAGAGA+TGG | + | chr5.3:18506538-18506557 | MS.gene78945:CDS | 35.0% |
| ! | TTCTGGATACTTTTGTTGCT+AGG | + | chr5.3:18508240-18508259 | MS.gene78945:intron | 35.0% |
| ! | TTTTGACAGGATTAAACCCT+CGG | + | chr5.3:18506694-18506713 | MS.gene78945:CDS | 35.0% |
| !! | AGGACGATGAAAATTGGTTT+TGG | + | chr5.3:18506349-18506368 | MS.gene78945:intron | 35.0% |
| !! | GGAAATTTTTCAAAACGGTG+TGG | + | chr5.3:18508637-18508656 | MS.gene78945:intron | 35.0% |
| !! | TAACTCTAAGATAAACCTCG+GGG | - | chr5.3:18507931-18507950 | None:intergenic | 35.0% |
| !!! | CTGTACCTTGTTTTTTCTTC+CGG | + | chr5.3:18507260-18507279 | MS.gene78945:intron | 35.0% |
| !!! | GTTGAATGTTTTTCTGGTTG+TGG | - | chr5.3:18506083-18506102 | None:intergenic | 35.0% |
| !!! | TGACTCATCTCTTGTTTTCA+AGG | - | chr5.3:18508512-18508531 | None:intergenic | 35.0% |
| !!! | TTTTTTCTTCCGGATGTCTT+GGG | + | chr5.3:18507270-18507289 | MS.gene78945:intron | 35.0% |
| AAACTTCTGGCCTGATAACT+TGG | + | chr5.3:18509217-18509236 | MS.gene78945:intron | 40.0% | |
| AAATGGCGACATCTTTATGC+AGG | + | chr5.3:18508369-18508388 | MS.gene78945:CDS | 40.0% | |
| AAGCAACTGTCCAAGTTATC+AGG | - | chr5.3:18509230-18509249 | None:intergenic | 40.0% | |
| AAGGCGAAAAGACCAAACTA+CGG | - | chr5.3:18506771-18506790 | None:intergenic | 40.0% | |
| ACATGAATCCACAGTTTGGT+TGG | - | chr5.3:18507229-18507248 | None:intergenic | 40.0% | |
| AGTAAGTACCTCGTAAGTTG+TGG | - | chr5.3:18506230-18506249 | None:intergenic | 40.0% | |
| CAAAGATTGTGTGTTGGATG+GGG | + | chr5.3:18508565-18508584 | MS.gene78945:intron | 40.0% | |
| CACAAACCATATTGTTTCCG+AGG | - | chr5.3:18506714-18506733 | None:intergenic | 40.0% | |
| CAGAATCGCACATCAATCAT+AGG | - | chr5.3:18507115-18507134 | None:intergenic | 40.0% | |
| CTATCAGACAAGAAACTTCC+AGG | + | chr5.3:18509086-18509105 | MS.gene78945:CDS | 40.0% | |
| CTGCTGGAAGATCTGATAAA+TGG | + | chr5.3:18508352-18508371 | MS.gene78945:CDS | 40.0% | |
| CTGGAAGTTTCTTGTCTGAT+AGG | - | chr5.3:18509088-18509107 | None:intergenic | 40.0% | |
| GAACTTTGCCAACATTGTCA+GGG | + | chr5.3:18507869-18507888 | MS.gene78945:intron | 40.0% | |
| GACATCCGGAAGAAAAAACA+AGG | - | chr5.3:18507268-18507287 | None:intergenic | 40.0% | |
| GCAACATTAGGAGGTAAACA+TGG | + | chr5.3:18508327-18508346 | MS.gene78945:CDS | 40.0% | |
| GGAGTCTAATGTGACATCAA+GGG | - | chr5.3:18509137-18509156 | None:intergenic | 40.0% | |
| GGTTGTGAAATTACAGGGAT+GGG | + | chr5.3:18509004-18509023 | MS.gene78945:CDS | 40.0% | |
| TACAAACAGTAGGAGACAGT+TGG | - | chr5.3:18506256-18506275 | None:intergenic | 40.0% | |
| TACATAAGATTGGGATGTCG+TGG | + | chr5.3:18509651-18509670 | MS.gene78945:CDS | 40.0% | |
| TCCTGCTTATGCTAAAAGTG+TGG | + | chr5.3:18509028-18509047 | MS.gene78945:CDS | 40.0% | |
| TGAACTTTGCCAACATTGTC+AGG | + | chr5.3:18507868-18507887 | MS.gene78945:intron | 40.0% | |
| TGATGTGCGATTCTGATCAA+TGG | + | chr5.3:18507120-18507139 | MS.gene78945:intron | 40.0% | |
| TGCATATACGAATGCAGATG+TGG | + | chr5.3:18508983-18509002 | MS.gene78945:CDS | 40.0% | |
| TGGAGTCTAATGTGACATCA+AGG | - | chr5.3:18509138-18509157 | None:intergenic | 40.0% | |
| TGGTTGTGAAATTACAGGGA+TGG | + | chr5.3:18509003-18509022 | MS.gene78945:CDS | 40.0% | |
| ! | ACTATCAGAGTTTTGCAGTC+AGG | + | chr5.3:18506638-18506657 | MS.gene78945:CDS | 40.0% |
| ! | GGATCATCACAGCTTTTGAA+AGG | + | chr5.3:18506916-18506935 | MS.gene78945:CDS | 40.0% |
| ! | GTCTAGACTTGAAGCCTTTT+AGG | - | chr5.3:18507497-18507516 | None:intergenic | 40.0% |
| ! | TATGCTAAAAGTGTGGCACA+GGG | + | chr5.3:18509035-18509054 | MS.gene78945:CDS | 40.0% |
| ! | TGAATGGTTATGATTTGGGC+AGG | + | chr5.3:18506797-18506816 | MS.gene78945:intron | 40.0% |
| ! | TTATGCTAAAAGTGTGGCAC+AGG | + | chr5.3:18509034-18509053 | MS.gene78945:CDS | 40.0% |
| ! | TTTTCGCCTTTGTGGTTGAA+TGG | + | chr5.3:18506781-18506800 | MS.gene78945:intron | 40.0% |
| !! | AAAGTGGGTTGTGACCTTAA+GGG | + | chr5.3:18507775-18507794 | MS.gene78945:intron | 40.0% |
| !! | ATTTTTCAAAACGGTGTGGG+TGG | + | chr5.3:18508641-18508660 | MS.gene78945:intron | 40.0% |
| !! | CTAAGTGTGTGTTTGGTTCT+AGG | + | chr5.3:18506329-18506348 | MS.gene78945:intron | 40.0% |
| !! | GGTTCTAGGACGATGAAAAT+TGG | + | chr5.3:18506343-18506362 | MS.gene78945:intron | 40.0% |
| !! | TAAAGTGGGTTGTGACCTTA+AGG | + | chr5.3:18507774-18507793 | MS.gene78945:intron | 40.0% |
| !! | TTTTTCAAAACGGTGTGGGT+GGG | + | chr5.3:18508642-18508661 | MS.gene78945:intron | 40.0% |
| !!! | GTTTTTCTGGTTGTGGGATT+TGG | - | chr5.3:18506076-18506095 | None:intergenic | 40.0% |
| !!! | GTTTTTTCTTCCGGATGTCT+TGG | + | chr5.3:18507269-18507288 | MS.gene78945:intron | 40.0% |
| !!! | TCTGTTTGCGAGTTGGTTTT+TGG | + | chr5.3:18507798-18507817 | MS.gene78945:intron | 40.0% |
| !!! | TTTGCGAGTTGGTTTTTGGA+GGG | + | chr5.3:18507802-18507821 | MS.gene78945:intron | 40.0% |
| AAACATCAAACCCCCTGGTT+GGG | + | chr5.3:18509683-18509702 | MS.gene78945:CDS | 45.0% | |
| AACTCGCAAACAGACCCTTA+AGG | - | chr5.3:18507792-18507811 | None:intergenic | 45.0% | |
| AAGGAATAGCCCAAGACATC+CGG | - | chr5.3:18507282-18507301 | None:intergenic | 45.0% | |
| AAGTACCTCGTAAGTTGTGG+TGG | - | chr5.3:18506227-18506246 | None:intergenic | 45.0% | |
| AATCATTTCAGACCCCATCC+CGG | + | chr5.3:18507727-18507746 | MS.gene78945:intron | 45.0% | |
| AGATGAAGATTCAGCAAGGG+AGG | + | chr5.3:18508929-18508948 | MS.gene78945:intron | 45.0% | |
| AGCATTTGCAGGGAGAAAGA+GGG | - | chr5.3:18506186-18506205 | None:intergenic | 45.0% | |
| AGTGAAGGTGGTGAAACTCT+TGG | + | chr5.3:18509714-18509733 | MS.gene78945:CDS | 45.0% | |
| AGTGCTCTGCTAGTCATGTA+AGG | + | chr5.3:18508295-18508314 | MS.gene78945:intron | 45.0% | |
| ATGTCAGGCCATTTCAACTC+GGG | - | chr5.3:18506868-18506887 | None:intergenic | 45.0% | |
| CACACATAACGGCTACAGAA+AGG | - | chr5.3:18507602-18507621 | None:intergenic | 45.0% | |
| GATGTCAGGCCATTTCAACT+CGG | - | chr5.3:18506869-18506888 | None:intergenic | 45.0% | |
| GCCTGACATCATGGAATCAT+GGG | + | chr5.3:18506879-18506898 | MS.gene78945:CDS | 45.0% | |
| GTGCTCTGCTAGTCATGTAA+GGG | + | chr5.3:18508296-18508315 | MS.gene78945:intron | 45.0% | |
| GTTCAACTCTGTCATCATGC+AGG | + | chr5.3:18509615-18509634 | MS.gene78945:intron | 45.0% | |
| GTTGAAATGGCCTGACATCA+TGG | + | chr5.3:18506870-18506889 | MS.gene78945:CDS | 45.0% | |
| GTTTCACCACCTTCACTTGA+TGG | - | chr5.3:18509711-18509730 | None:intergenic | 45.0% | |
| TCCCATGATTCCATGATGTC+AGG | - | chr5.3:18506883-18506902 | None:intergenic | 45.0% | |
| TGTTTCCACCACAACTTACG+AGG | + | chr5.3:18506219-18506238 | MS.gene78945:CDS | 45.0% | |
| TTAAGGGTCTGTTTGCGAGT+TGG | + | chr5.3:18507791-18507810 | MS.gene78945:intron | 45.0% | |
| ! | AACCCAAAAGTGGTTGGTCA+CGG | + | chr5.3:18507751-18507770 | MS.gene78945:intron | 45.0% |
| ! | CAAGCTCTTCAGCCACTTTA+TGG | - | chr5.3:18506981-18507000 | None:intergenic | 45.0% |
| ! | CGTAAGTTGTGGTGGAAACA+GGG | - | chr5.3:18506219-18506238 | None:intergenic | 45.0% |
| ! | GCCACACTTTTAGCATAAGC+AGG | - | chr5.3:18509032-18509051 | None:intergenic | 45.0% |
| ! | GTAAGTTGTGGTGGAAACAG+GGG | - | chr5.3:18506218-18506237 | None:intergenic | 45.0% |
| ! | TCGTAAGTTGTGGTGGAAAC+AGG | - | chr5.3:18506220-18506239 | None:intergenic | 45.0% |
| ! | TTACCGTGACCAACCACTTT+TGG | - | chr5.3:18507757-18507776 | None:intergenic | 45.0% |
| ! | TTGTCACAGACTGAAGCATC+AGG | + | chr5.3:18508405-18508424 | MS.gene78945:CDS | 45.0% |
| !! | GTTTGGTCTTTTCGCCTTTG+TGG | + | chr5.3:18506773-18506792 | MS.gene78945:intron | 45.0% |
| !! | TACCGTGACCAACCACTTTT+GGG | - | chr5.3:18507756-18507775 | None:intergenic | 45.0% |
| !! | TTTCTGGTTGTGGGATTTGG+AGG | - | chr5.3:18506073-18506092 | None:intergenic | 45.0% |
| !!! | ACCAACCACTTTTGGGTTTC+CGG | - | chr5.3:18507749-18507768 | None:intergenic | 45.0% |
| !!! | GTTTGCGAGTTGGTTTTTGG+AGG | + | chr5.3:18507801-18507820 | MS.gene78945:intron | 45.0% |
| AAGTACAGTGCCTTCGCCTT+CGG | - | chr5.3:18508182-18508201 | None:intergenic | 50.0% | |
| AATTCAGGAGGCGAAGAGTG+TGG | + | chr5.3:18508588-18508607 | MS.gene78945:intron | 50.0% | |
| AGGAAGAAACCTGAGAGCAG+CGG | - | chr5.3:18506053-18506072 | None:intergenic | 50.0% | |
| AGGGCAGCAGTTGCAACATT+AGG | + | chr5.3:18508315-18508334 | MS.gene78945:CDS | 50.0% | |
| ATTTGCAACCCTGGGAACCT+CGG | + | chr5.3:18507905-18507924 | MS.gene78945:intron | 50.0% | |
| CAAACATCAAACCCCCTGGT+TGG | + | chr5.3:18509682-18509701 | MS.gene78945:CDS | 50.0% | |
| CAACCAGGGGGTTTGATGTT+TGG | - | chr5.3:18509684-18509703 | None:intergenic | 50.0% | |
| GAGCATTTGCAGGGAGAAAG+AGG | - | chr5.3:18506187-18506206 | None:intergenic | 50.0% | |
| GATTGGGATGTCGTGGTGAT+TGG | + | chr5.3:18509658-18509677 | MS.gene78945:CDS | 50.0% | |
| GCAGCAGTTGCAACATTAGG+AGG | + | chr5.3:18508318-18508337 | MS.gene78945:CDS | 50.0% | |
| GGCCTGACATCATGGAATCA+TGG | + | chr5.3:18506878-18506897 | MS.gene78945:CDS | 50.0% | |
| GGGCTATTCCTTCCACCATA+GGG | + | chr5.3:18507290-18507309 | MS.gene78945:intron | 50.0% | |
| GGTTGGGATCCATCAAGTGA+AGG | + | chr5.3:18509699-18509718 | MS.gene78945:CDS | 50.0% | |
| GTGTGTTGGATGGGGAATTC+AGG | + | chr5.3:18508573-18508592 | MS.gene78945:intron | 50.0% | |
| TGGGATCCATCAAGTGAAGG+TGG | + | chr5.3:18509702-18509721 | MS.gene78945:CDS | 50.0% | |
| TGGGCTATTCCTTCCACCAT+AGG | + | chr5.3:18507289-18507308 | MS.gene78945:intron | 50.0% | |
| TGTTGGATGGGGAATTCAGG+AGG | + | chr5.3:18508576-18508595 | MS.gene78945:intron | 50.0% | |
| ! | ACTTGATGGATCCCAACCAG+GGG | - | chr5.3:18509697-18509716 | None:intergenic | 50.0% |
| ! | AGTGGTTGGTCACGGTAAAG+TGG | + | chr5.3:18507759-18507778 | MS.gene78945:intron | 50.0% |
| ! | CACTTGATGGATCCCAACCA+GGG | - | chr5.3:18509698-18509717 | None:intergenic | 50.0% |
| ! | GTGGTTGGTCACGGTAAAGT+GGG | + | chr5.3:18507760-18507779 | MS.gene78945:intron | 50.0% |
| ! | TCACTTGATGGATCCCAACC+AGG | - | chr5.3:18509699-18509718 | None:intergenic | 50.0% |
| ! | TCATGGGAATCACTTGCTGC+TGG | + | chr5.3:18506895-18506914 | MS.gene78945:CDS | 50.0% |
| !! | AAGAGCTTGCTACTGGTCTG+GGG | + | chr5.3:18506992-18507011 | MS.gene78945:CDS | 50.0% |
| !! | GAAGAGCTTGCTACTGGTCT+GGG | + | chr5.3:18506991-18507010 | MS.gene78945:CDS | 50.0% |
| !! | GCAGTGAAGGAGCATTTGCA+GGG | - | chr5.3:18506196-18506215 | None:intergenic | 50.0% |
| !! | TGAAGAGCTTGCTACTGGTC+TGG | + | chr5.3:18506990-18507009 | MS.gene78945:CDS | 50.0% |
| !!! | ACTTTTGGGTTTCCGGGATG+GGG | - | chr5.3:18507742-18507761 | None:intergenic | 50.0% |
| !!! | CACTTTTGGGTTTCCGGGAT+GGG | - | chr5.3:18507743-18507762 | None:intergenic | 50.0% |
| !!! | CCAACCACTTTTGGGTTTCC+GGG | - | chr5.3:18507748-18507767 | None:intergenic | 50.0% |
| AGAACCTTGCAGCCCTATGG+TGG | - | chr5.3:18507305-18507324 | None:intergenic | 55.0% | |
| CCATCCCGGAAACCCAAAAG+TGG | + | chr5.3:18507741-18507760 | MS.gene78945:intron | 55.0% | |
| CCCGGAAACCCAAAAGTGGT+TGG | + | chr5.3:18507745-18507764 | MS.gene78945:intron | 55.0% | |
| GGAAGAAACCTGAGAGCAGC+GGG | - | chr5.3:18506052-18506071 | None:intergenic | 55.0% | |
| TAAGATAAACCTCGGGGCCG+AGG | - | chr5.3:18507925-18507944 | None:intergenic | 55.0% | |
| TCAAAACGGTGTGGGTGGGT+GGG | + | chr5.3:18508646-18508665 | MS.gene78945:intron | 55.0% | |
| TGCAGAACCTTGCAGCCCTA+TGG | - | chr5.3:18507308-18507327 | None:intergenic | 55.0% | |
| TGGCCAAACATCAAACCCCC+TGG | + | chr5.3:18509678-18509697 | MS.gene78945:CDS | 55.0% | |
| TTCAAAACGGTGTGGGTGGG+TGG | + | chr5.3:18508645-18508664 | MS.gene78945:intron | 55.0% | |
| ! | ATTCCAGGGCTGCTTGCTGA+AGG | + | chr5.3:18508142-18508161 | MS.gene78945:intron | 55.0% |
| ! | CTTGATGGATCCCAACCAGG+GGG | - | chr5.3:18509696-18509715 | None:intergenic | 55.0% |
| ! | GGTTCTGACTCAGTAGCCGA+AGG | + | chr5.3:18508163-18508182 | MS.gene78945:CDS | 55.0% |
| !! | GGAGGTAAACATGGTGCTGC+TGG | + | chr5.3:18508336-18508355 | MS.gene78945:CDS | 55.0% |
| !! | GGCAGTGAAGGAGCATTTGC+AGG | - | chr5.3:18506197-18506216 | None:intergenic | 55.0% |
| !! | GTGGCTGAAGAGCTTGCTAC+TGG | + | chr5.3:18506985-18507004 | MS.gene78945:CDS | 55.0% |
| !!! | CCACTTTTGGGTTTCCGGGA+TGG | - | chr5.3:18507744-18507763 | None:intergenic | 55.0% |
| AAAACGGTGTGGGTGGGTGG+GGG | + | chr5.3:18508648-18508667 | MS.gene78945:intron | 60.0% | |
| AAACCTGAGAGCAGCGGGAG+TGG | - | chr5.3:18506047-18506066 | None:intergenic | 60.0% | |
| CAAAACGGTGTGGGTGGGTG+GGG | + | chr5.3:18508647-18508666 | MS.gene78945:intron | 60.0% | |
| CCTTCCACCATAGGGCTGCA+AGG | + | chr5.3:18507298-18507317 | MS.gene78945:intron | 60.0% | |
| GAACCTTCAGCAAGCAGCCC+TGG | - | chr5.3:18508148-18508167 | None:intergenic | 60.0% | |
| GACTCAGTAGCCGAAGGCGA+AGG | + | chr5.3:18508169-18508188 | MS.gene78945:CDS | 60.0% | |
| GGTGGAAACAGGGGCAGTGA+AGG | - | chr5.3:18506209-18506228 | None:intergenic | 60.0% | |
| ! | CCTTGCAGCCCTATGGTGGA+AGG | - | chr5.3:18507301-18507320 | None:intergenic | 60.0% |
| TCACCACTCCCGCTGCTCTC+AGG | + | chr5.3:18506041-18506060 | MS.gene78945:CDS | 65.0% | |
| ACCTCGGGGCCGAGGTTCCC+AGG | - | chr5.3:18507917-18507936 | None:intergenic | 75.0% | |
| CCTCGGGGCCGAGGTTCCCA+GGG | - | chr5.3:18507916-18507935 | None:intergenic | 75.0% | |
| ! | CCCTGGGAACCTCGGCCCCG+AGG | + | chr5.3:18507913-18507932 | MS.gene78945:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 18506028 | 18509746 | 18506028 | ID=MS.gene78945 |
| chr5.3 | mRNA | 18506028 | 18509746 | 18506028 | ID=MS.gene78945.t1;Parent=MS.gene78945 |
| chr5.3 | exon | 18506028 | 18506240 | 18506028 | ID=MS.gene78945.t1.exon1;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18506028 | 18506240 | 18506028 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18506536 | 18506726 | 18506536 | ID=MS.gene78945.t1.exon2;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18506536 | 18506726 | 18506536 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18506819 | 18507013 | 18506819 | ID=MS.gene78945.t1.exon3;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18506819 | 18507013 | 18506819 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18507185 | 18507246 | 18507185 | ID=MS.gene78945.t1.exon4;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18507185 | 18507246 | 18507185 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18508149 | 18508215 | 18508149 | ID=MS.gene78945.t1.exon5;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18508149 | 18508215 | 18508149 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18508308 | 18508426 | 18508308 | ID=MS.gene78945.t1.exon6;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18508308 | 18508426 | 18508308 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18508931 | 18509107 | 18508931 | ID=MS.gene78945.t1.exon7;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18508931 | 18509107 | 18508931 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| chr5.3 | exon | 18509637 | 18509746 | 18509637 | ID=MS.gene78945.t1.exon8;Parent=MS.gene78945.t1 |
| chr5.3 | CDS | 18509637 | 18509746 | 18509637 | ID=cds.MS.gene78945.t1;Parent=MS.gene78945.t1 |
| Gene Sequence |
| Protein sequence |
