Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58071.t1 | XP_003610284.1 | 95.5 | 266 | 12 | 0 | 1 | 266 | 1 | 266 | 1.30E-131 | 479.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58071.t1 | O82234 | 55.4 | 269 | 100 | 4 | 1 | 254 | 1 | 264 | 5.1e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58071.t1 | G7JFJ8 | 95.5 | 266 | 12 | 0 | 1 | 266 | 1 | 266 | 9.1e-132 | 479.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene58071 | 0.913907 | 3.57E-84 | -1.69E-46 |
| MS.gene049171 | MS.gene58071 | 0.845819 | 3.20E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene58071 | 0.843843 | 1.09E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene58071 | 0.860292 | 2.29E-63 | -1.69E-46 |
| MS.gene049285 | MS.gene58071 | 0.853291 | 2.63E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene58071 | 0.830143 | 3.47E-55 | -1.69E-46 |
| MS.gene049351 | MS.gene58071 | 0.824971 | 6.05E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene58071 | 0.888446 | 5.86E-73 | -1.69E-46 |
| MS.gene049609 | MS.gene58071 | 0.856243 | 3.67E-62 | -1.69E-46 |
| MS.gene049615 | MS.gene58071 | 0.836164 | 1.10E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene58071 | 0.804613 | 1.99E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene58071 | 0.892695 | 1.25E-74 | -1.69E-46 |
| MS.gene050076 | MS.gene58071 | 0.835807 | 1.35E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene58071 | 0.853796 | 1.89E-61 | -1.69E-46 |
| MS.gene050165 | MS.gene58071 | 0.821064 | 4.92E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene58071 | 0.827519 | 1.50E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene58071 | 0.831049 | 2.08E-55 | -1.69E-46 |
| MS.gene050479 | MS.gene58071 | -0.805051 | 1.61E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene58071 | 0.814827 | 1.26E-51 | -1.69E-46 |
| MS.gene050507 | MS.gene58071 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene050518 | MS.gene58071 | 0.82455 | 7.60E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene58071 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene58071 | 0.84177 | 3.88E-58 | -1.69E-46 |
| MS.gene050547 | MS.gene58071 | -0.815804 | 7.66E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene58071 | 0.843424 | 1.41E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene58071 | 0.858731 | 6.74E-63 | -1.69E-46 |
| MS.gene050612 | MS.gene58071 | 0.804593 | 2.01E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene58071 | 0.861092 | 1.31E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene58071 | 0.838386 | 2.97E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene58071 | 0.882329 | 1.14E-70 | -1.69E-46 |
| MS.gene050767 | MS.gene58071 | 0.831597 | 1.53E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene58071 | 0.835288 | 1.83E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene58071 | 0.856075 | 4.11E-62 | -1.69E-46 |
| MS.gene050781 | MS.gene58071 | 0.853626 | 2.11E-61 | -1.69E-46 |
| MS.gene050783 | MS.gene58071 | 0.858077 | 1.06E-62 | -1.69E-46 |
| MS.gene05080 | MS.gene58071 | 0.815991 | 6.96E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene58071 | 0.875112 | 3.98E-68 | -1.69E-46 |
| MS.gene050950 | MS.gene58071 | 0.8681 | 8.39E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene58071 | 0.870509 | 1.38E-66 | -1.69E-46 |
| MS.gene05101 | MS.gene58071 | 0.834411 | 3.05E-56 | -1.69E-46 |
| MS.gene05105 | MS.gene58071 | 0.846717 | 1.82E-59 | -1.69E-46 |
| MS.gene051167 | MS.gene58071 | -0.806937 | 6.45E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene58071 | 0.88893 | 3.81E-73 | -1.69E-46 |
| MS.gene051471 | MS.gene58071 | 0.807218 | 5.63E-50 | -1.69E-46 |
| MS.gene051525 | MS.gene58071 | 0.815045 | 1.13E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene58071 | 0.856751 | 2.60E-62 | -1.69E-46 |
| MS.gene051666 | MS.gene58071 | 0.903635 | 2.83E-79 | -1.69E-46 |
| MS.gene051692 | MS.gene58071 | 0.805232 | 1.47E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene58071 | 0.847227 | 1.32E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene58071 | 0.813672 | 2.27E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene58071 | 0.810224 | 1.28E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene58071 | 0.809059 | 2.28E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene58071 | 0.805425 | 1.34E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene58071 | 0.841386 | 4.90E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene58071 | 0.855794 | 4.97E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene58071 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene58071 | 0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene58071 | 0.839511 | 1.52E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene58071 | 0.876171 | 1.73E-68 | -1.69E-46 |
| MS.gene052481 | MS.gene58071 | 0.85473 | 1.01E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene58071 | 0.823317 | 1.48E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene58071 | 0.826917 | 2.09E-54 | -1.69E-46 |
| MS.gene052501 | MS.gene58071 | 0.849167 | 3.85E-60 | -1.69E-46 |
| MS.gene052503 | MS.gene58071 | 0.825324 | 4.99E-54 | -1.69E-46 |
| MS.gene052505 | MS.gene58071 | 0.849829 | 2.52E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene58071 | 0.867363 | 1.45E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene58071 | 0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene58071 | 0.815102 | 1.10E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene58071 | 0.853356 | 2.52E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene58071 | 0.856418 | 3.26E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene58071 | 0.849512 | 3.08E-60 | -1.69E-46 |
| MS.gene053107 | MS.gene58071 | 0.876836 | 1.02E-68 | -1.69E-46 |
| MS.gene053203 | MS.gene58071 | 0.808191 | 3.50E-50 | -1.69E-46 |
| MS.gene053207 | MS.gene58071 | 0.842287 | 2.84E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene58071 | 0.871058 | 9.12E-67 | -1.69E-46 |
| MS.gene053286 | MS.gene58071 | 0.859273 | 4.64E-63 | -1.69E-46 |
| MS.gene053322 | MS.gene58071 | 0.894798 | 1.76E-75 | -1.69E-46 |
| MS.gene053436 | MS.gene58071 | 0.854744 | 1.00E-61 | -1.69E-46 |
| MS.gene053574 | MS.gene58071 | 0.835658 | 1.48E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene58071 | 0.889777 | 1.79E-73 | -1.69E-46 |
| MS.gene053626 | MS.gene58071 | 0.812511 | 4.09E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene58071 | 0.863659 | 2.13E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene58071 | 0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene053915 | MS.gene58071 | 0.822872 | 1.88E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene58071 | 0.811548 | 6.62E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene58071 | 0.813307 | 2.74E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene58071 | 0.826423 | 2.74E-54 | -1.69E-46 |
| MS.gene054408 | MS.gene58071 | 0.864253 | 1.39E-64 | -1.69E-46 |
| MS.gene054595 | MS.gene58071 | 0.824634 | 7.26E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene58071 | 0.837388 | 5.35E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene58071 | 0.858108 | 1.03E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene58071 | 0.803492 | 3.40E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene58071 | 0.869914 | 2.17E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene58071 | 0.866117 | 3.60E-65 | -1.69E-46 |
| MS.gene054804 | MS.gene58071 | 0.869732 | 2.48E-66 | -1.69E-46 |
| MS.gene054927 | MS.gene58071 | 0.841461 | 4.69E-58 | -1.69E-46 |
| MS.gene05505 | MS.gene58071 | 0.855406 | 6.45E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene58071 | 0.815708 | 8.05E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene58071 | 0.851221 | 1.02E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene58071 | 0.810139 | 1.34E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene58071 | 0.837182 | 6.04E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene58071 | 0.8343 | 3.25E-56 | -1.69E-46 |
| MS.gene055370 | MS.gene58071 | 0.831942 | 1.25E-55 | -1.69E-46 |
| MS.gene055397 | MS.gene58071 | 0.848991 | 4.31E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene58071 | 0.87318 | 1.79E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene58071 | 0.845641 | 3.58E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene58071 | 0.848407 | 6.25E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene58071 | 0.817001 | 4.14E-52 | -1.69E-46 |
| MS.gene055605 | MS.gene58071 | 0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene055647 | MS.gene58071 | 0.846636 | 1.92E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene58071 | 0.814478 | 1.51E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene58071 | 0.809852 | 1.54E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene58071 | 0.821093 | 4.85E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene58071 | 0.841532 | 4.49E-58 | -1.69E-46 |
| MS.gene056040 | MS.gene58071 | 0.818972 | 1.48E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene58071 | 0.820089 | 8.25E-53 | -1.69E-46 |
| MS.gene056263 | MS.gene58071 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene58071 | 0.843318 | 1.51E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene58071 | 0.8666 | 2.53E-65 | -1.69E-46 |
| MS.gene056452 | MS.gene58071 | 0.81234 | 4.45E-51 | -1.69E-46 |
| MS.gene056497 | MS.gene58071 | 0.817802 | 2.73E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene58071 | 0.807837 | 4.16E-50 | -1.69E-46 |
| MS.gene056610 | MS.gene58071 | 0.81195 | 5.42E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene58071 | 0.83603 | 1.19E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene58071 | 0.831146 | 1.97E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene58071 | 0.818095 | 2.34E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene58071 | 0.911002 | 9.95E-83 | -1.69E-46 |
| MS.gene057048 | MS.gene58071 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene58071 | 0.825162 | 5.45E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene58071 | 0.82489 | 6.32E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene58071 | 0.882779 | 7.82E-71 | -1.69E-46 |
| MS.gene057146 | MS.gene58071 | 0.88422 | 2.31E-71 | -1.69E-46 |
| MS.gene057196 | MS.gene58071 | 0.83042 | 2.97E-55 | -1.69E-46 |
| MS.gene057295 | MS.gene58071 | 0.815191 | 1.05E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene58071 | 0.814849 | 1.25E-51 | -1.69E-46 |
| MS.gene057332 | MS.gene58071 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene58071 | 0.896655 | 2.99E-76 | -1.69E-46 |
| MS.gene057658 | MS.gene58071 | 0.84381 | 1.11E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene58071 | 0.80855 | 2.93E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene58071 | 0.820395 | 7.02E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene58071 | 0.845858 | 3.12E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene58071 | 0.812276 | 4.60E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene58071 | 0.89845 | 5.25E-77 | -1.69E-46 |
| MS.gene058130 | MS.gene58071 | 0.813656 | 2.29E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene58071 | 0.851166 | 1.06E-60 | -1.69E-46 |
| MS.gene058293 | MS.gene58071 | 0.880369 | 5.81E-70 | -1.69E-46 |
| MS.gene058323 | MS.gene58071 | 0.841019 | 6.12E-58 | -1.69E-46 |
| MS.gene058376 | MS.gene58071 | 0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene58071 | 0.833654 | 4.71E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene58071 | 0.870273 | 1.65E-66 | -1.69E-46 |
| MS.gene058444 | MS.gene58071 | 0.804977 | 1.67E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene58071 | 0.874519 | 6.34E-68 | -1.69E-46 |
| MS.gene058660 | MS.gene58071 | 0.8702 | 1.75E-66 | -1.69E-46 |
| MS.gene058700 | MS.gene58071 | 0.81337 | 2.65E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene58071 | 0.839698 | 1.36E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene58071 | 0.850317 | 1.84E-60 | -1.69E-46 |
| MS.gene058993 | MS.gene58071 | 0.811249 | 7.70E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene58071 | 0.837382 | 5.37E-57 | -1.69E-46 |
| MS.gene059141 | MS.gene58071 | 0.841488 | 4.61E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene58071 | 0.805098 | 1.57E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene58071 | 0.867102 | 1.75E-65 | -1.69E-46 |
| MS.gene059536 | MS.gene58071 | 0.874969 | 4.46E-68 | -1.69E-46 |
| MS.gene059597 | MS.gene58071 | 0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene58071 | 0.842045 | 3.29E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene58071 | 0.83586 | 1.31E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene58071 | 0.848887 | 4.60E-60 | -1.69E-46 |
| MS.gene059692 | MS.gene58071 | 0.832088 | 1.15E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene58071 | 0.840265 | 9.65E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene58071 | 0.852064 | 5.90E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene58071 | 0.835242 | 1.88E-56 | -1.69E-46 |
| MS.gene059801 | MS.gene58071 | 0.820182 | 7.85E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene58071 | 0.819046 | 1.43E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene58071 | 0.906327 | 1.67E-80 | -1.69E-46 |
| MS.gene060193 | MS.gene58071 | 0.831525 | 1.59E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene58071 | 0.849903 | 2.40E-60 | -1.69E-46 |
| MS.gene060675 | MS.gene58071 | 0.828327 | 9.56E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene58071 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene58071 | 0.825588 | 4.32E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene58071 | 0.844941 | 5.53E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene58071 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene58071 | 0.821733 | 3.45E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene58071 | 0.80194 | 7.10E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene58071 | 0.899271 | 2.34E-77 | -1.69E-46 |
| MS.gene061041 | MS.gene58071 | 0.816218 | 6.19E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene58071 | 0.889093 | 3.30E-73 | -1.69E-46 |
| MS.gene061200 | MS.gene58071 | 0.894219 | 3.03E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58071.t1 | MTR_4g130530 | 95.489 | 266 | 12 | 0 | 1 | 266 | 1 | 266 | 1.33e-180 | 497 |
| MS.gene58071.t1 | MTR_4g130530 | 95.045 | 222 | 11 | 0 | 1 | 222 | 1 | 222 | 5.01e-148 | 413 |
| MS.gene58071.t1 | MTR_4g130530 | 95.152 | 165 | 8 | 0 | 1 | 165 | 1 | 165 | 1.56e-104 | 301 |
| MS.gene58071.t1 | MTR_7g017820 | 96.970 | 33 | 1 | 0 | 188 | 220 | 4 | 36 | 8.23e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58071.t1 | AT2G24060 | 55.556 | 270 | 98 | 4 | 1 | 254 | 1 | 264 | 1.55e-89 | 268 |
| MS.gene58071.t1 | AT4G30690 | 57.371 | 251 | 98 | 4 | 1 | 250 | 14 | 256 | 4.92e-87 | 261 |
| MS.gene58071.t1 | AT4G30690 | 50.199 | 251 | 88 | 4 | 1 | 250 | 14 | 228 | 3.26e-72 | 222 |
| MS.gene58071.t1 | AT1G34360 | 34.783 | 115 | 71 | 2 | 82 | 194 | 23 | 135 | 4.46e-11 | 63.2 |
| MS.gene58071.t1 | AT1G34360 | 34.783 | 115 | 71 | 2 | 82 | 194 | 89 | 201 | 4.50e-11 | 63.2 |
| MS.gene58071.t1 | AT1G34360 | 33.913 | 115 | 72 | 2 | 82 | 194 | 89 | 201 | 4.57e-11 | 63.2 |
Find 57 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTGCTTCAGCTTTCTT+TGG | 0.232978 | 8.4:-3847563 | None:intergenic |
| GGATTTGAAGGAGCTTAAAA+TGG | 0.251941 | 8.4:+3846265 | MS.gene58071:CDS |
| TTGTTAGAATAATGAATTAC+AGG | 0.335848 | 8.4:+3844827 | MS.gene58071:CDS |
| TATTGATCAGAGTCAGAATA+TGG | 0.349868 | 8.4:+3844270 | MS.gene58071:CDS |
| TTAGAATACGTACCTAAGTT+TGG | 0.359504 | 8.4:-3844150 | None:intergenic |
| TGAAGATGCTGAACTTGATT+TGG | 0.377323 | 8.4:+3844330 | MS.gene58071:CDS |
| TCATCGTCAGCATCTTTGTT+AGG | 0.382465 | 8.4:-3844110 | None:intergenic |
| TGCGAGGCTTTGAGTTTAAC+GGG | 0.413405 | 8.4:-3843939 | None:intergenic |
| GATTTGAAGGAGCTTAAAAT+GGG | 0.419531 | 8.4:+3846266 | MS.gene58071:CDS |
| ATGCGAGGCTTTGAGTTTAA+CGG | 0.431987 | 8.4:-3843940 | None:intergenic |
| CACCGTAACGAACGGTTGCG+TGG | 0.437086 | 8.4:-3844034 | None:intergenic |
| TAATTCATTATTCTAACAAC+AGG | 0.442385 | 8.4:-3844823 | None:intergenic |
| AAGGTCATAGTAAACCTTAA+AGG | 0.442796 | 8.4:+3847094 | MS.gene58071:CDS |
| GCTTTCTTTGGTGTTTCTTG+AGG | 0.453019 | 8.4:-3847551 | None:intergenic |
| AACGGGAACGACGGTGGTGG+TGG | 0.470380 | 8.4:-3843922 | None:intergenic |
| GTGTAAACCAACGCCATGGC+TGG | 0.473725 | 8.4:+3843894 | None:intergenic |
| CGTCCTTCCGCCTACGGTGG+CGG | 0.475627 | 8.4:+3844065 | MS.gene58071:CDS |
| TGGAGTAGTATCTCTTGATC+AGG | 0.480101 | 8.4:+3844294 | MS.gene58071:CDS |
| AACCTCCGTCCTTCCGCCTA+CGG | 0.484697 | 8.4:+3844059 | MS.gene58071:CDS |
| AGGGAGAAGATTGAAAATTG+AGG | 0.492839 | 8.4:-3843995 | None:intergenic |
| GTGGGAAGGAAGAGTGAATG+AGG | 0.494919 | 8.4:-3844015 | None:intergenic |
| AGCTAGTCGGATGGATTTGA+AGG | 0.496946 | 8.4:+3846253 | MS.gene58071:intron |
| GGGAGAAGATTGAAAATTGA+GGG | 0.497096 | 8.4:-3843994 | None:intergenic |
| GAAATAGGTCGAATACCGTT+AGG | 0.499801 | 8.4:+3844245 | MS.gene58071:intron |
| GATTGAAAATTGAGGGAATG+AGG | 0.509324 | 8.4:-3843987 | None:intergenic |
| CCTTCCGCCTACGGTGGCGG+TGG | 0.531353 | 8.4:+3844068 | MS.gene58071:CDS |
| TGGGAAGGAAGAGTGAATGA+GGG | 0.537972 | 8.4:-3844014 | None:intergenic |
| GATCAGCAGAAGAAAAGTGC+TGG | 0.542127 | 8.4:+3846128 | MS.gene58071:CDS |
| CGCCACCGTAGGCGGAAGGA+CGG | 0.545325 | 8.4:-3844064 | None:intergenic |
| TCGTCAGCATCTTTGTTAGG+AGG | 0.545365 | 8.4:-3844107 | None:intergenic |
| TCCCACGCAACCGTTCGTTA+CGG | 0.549673 | 8.4:+3844032 | MS.gene58071:CDS |
| AGCTGAAGCAGATGAAGTCT+CGG | 0.555824 | 8.4:+3847571 | MS.gene58071:CDS |
| TCAGCATCTTTGTTAGGAGG+AGG | 0.559988 | 8.4:-3844104 | None:intergenic |
| CTCTCGACCTCTCCAAACTT+AGG | 0.560626 | 8.4:+3844138 | MS.gene58071:CDS |
| TAACGAACGGTTGCGTGGGA+AGG | 0.567710 | 8.4:-3844029 | None:intergenic |
| TTCATTATTCTAACAACAGG+AGG | 0.568824 | 8.4:-3844820 | None:intergenic |
| GATCAGAGTCAGAATATGGT+TGG | 0.572223 | 8.4:+3844274 | MS.gene58071:CDS |
| GAAGTTGCCACCGCCACCGT+AGG | 0.573642 | 8.4:-3844075 | None:intergenic |
| ACCGTAACGAACGGTTGCGT+GGG | 0.576730 | 8.4:-3844033 | None:intergenic |
| CTCCGTCCTTCCGCCTACGG+TGG | 0.582540 | 8.4:+3844062 | MS.gene58071:CDS |
| GTTGCCACCGCCACCGTAGG+CGG | 0.587312 | 8.4:-3844072 | None:intergenic |
| TCATGTGCAGCTTGCAACAG+AGG | 0.599439 | 8.4:+3847460 | MS.gene58071:intron |
| GAGTTTAACGGGAACGACGG+TGG | 0.603870 | 8.4:-3843928 | None:intergenic |
| CCACCGCCACCGTAGGCGGA+AGG | 0.608125 | 8.4:-3844068 | None:intergenic |
| CACCGTAGGCGGAAGGACGG+AGG | 0.610477 | 8.4:-3844061 | None:intergenic |
| TTTAACGGGAACGACGGTGG+TGG | 0.617395 | 8.4:-3843925 | None:intergenic |
| GGTGGTGGTAATGCCAGCCA+TGG | 0.622734 | 8.4:-3843907 | None:intergenic |
| TCTTGATCAGGCAATTCGAA+TGG | 0.623560 | 8.4:+3844306 | MS.gene58071:CDS |
| TTTATTAGAGAATAGATGCG+AGG | 0.635663 | 8.4:-3843955 | None:intergenic |
| TGTGCAGCTTGCAACAGAGG+AGG | 0.648795 | 8.4:+3847463 | MS.gene58071:intron |
| ACTCTGATCAATAAGCCTAA+CGG | 0.652818 | 8.4:-3844260 | None:intergenic |
| GAGGTTAACACCGTAACGAA+CGG | 0.655700 | 8.4:-3844042 | None:intergenic |
| TTTGAGTTTAACGGGAACGA+CGG | 0.669820 | 8.4:-3843931 | None:intergenic |
| CTGTACGTTTGAAAGCTGCA+CGG | 0.670288 | 8.4:+3846951 | MS.gene58071:CDS |
| ATTTGAAGGAGCTTAAAATG+GGG | 0.674873 | 8.4:+3846267 | MS.gene58071:CDS |
| GTAGGTAATAGTATCTGCAG+AGG | 0.675285 | 8.4:+3844792 | MS.gene58071:intron |
| ATACGTACCTAAGTTTGGAG+AGG | 0.687696 | 8.4:-3844145 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTGTAAATGATATAA+AGG | - | chr8.4:3846184-3846203 | None:intergenic | 10.0% |
| !! | AAAAATTAACAAGTAAAGAT+AGG | - | chr8.4:3846527-3846546 | None:intergenic | 15.0% |
| !! | AATGATTATATTATATGGTT+TGG | + | chr8.4:3845206-3845225 | MS.gene58071:intron | 15.0% |
| !! | GTAAATGATTTAAATAGAAA+AGG | - | chr8.4:3847334-3847353 | None:intergenic | 15.0% |
| !! | TGTAAAAGAAGAAAAATATA+AGG | - | chr8.4:3846073-3846092 | None:intergenic | 15.0% |
| !! | TGTAAAGTTTAATATATTTC+AGG | - | chr8.4:3844869-3844888 | None:intergenic | 15.0% |
| !! | TTTAGATATAAAATACACTT+AGG | - | chr8.4:3847431-3847450 | None:intergenic | 15.0% |
| !!! | AATCATCAATATTTCTATAA+GGG | + | chr8.4:3846419-3846438 | MS.gene58071:intron | 15.0% |
| !!! | AGAAATATTGATGATTAAAT+TGG | - | chr8.4:3846415-3846434 | None:intergenic | 15.0% |
| !!! | ATATCTTATTTTATTATCAC+TGG | + | chr8.4:3847387-3847406 | MS.gene58071:intron | 15.0% |
| !!! | ATTTTGTTTATTGTTTTGTT+TGG | + | chr8.4:3846889-3846908 | MS.gene58071:intron | 15.0% |
| !!! | TAATCATCAATATTTCTATA+AGG | + | chr8.4:3846418-3846437 | MS.gene58071:intron | 15.0% |
| !! | AAGTTTAATATATTTCAGGA+CGG | - | chr8.4:3844865-3844884 | None:intergenic | 20.0% |
| !! | ACAAAAATTCGAAATAGAAA+TGG | - | chr8.4:3844199-3844218 | None:intergenic | 20.0% |
| !! | ACCATCTTAATCTTAAAAAA+CGG | - | chr8.4:3845613-3845632 | None:intergenic | 20.0% |
| !! | ATATAGTATAAAAAAACCAG+TGG | + | chr8.4:3844966-3844985 | MS.gene58071:intron | 20.0% |
| !! | TAATTCATTATTCTAACAAC+AGG | - | chr8.4:3844826-3844845 | None:intergenic | 20.0% |
| !! | TATACCAATGTTATGAAAAT+TGG | - | chr8.4:3845294-3845313 | None:intergenic | 20.0% |
| !! | TTGTTAGAATAATGAATTAC+AGG | + | chr8.4:3844827-3844846 | MS.gene58071:CDS | 20.0% |
| !!! | AAAGCAATGCTTTTAAAAAT+CGG | + | chr8.4:3845002-3845021 | MS.gene58071:intron | 20.0% |
| !!! | AAATGGATAACTCAATTTTT+AGG | + | chr8.4:3845550-3845569 | MS.gene58071:intron | 20.0% |
| !!! | AATGGATAACTCAATTTTTA+GGG | + | chr8.4:3845551-3845570 | MS.gene58071:intron | 20.0% |
| !!! | ATTATATTATATGGTTTGGA+TGG | + | chr8.4:3845210-3845229 | MS.gene58071:intron | 20.0% |
| !!! | ATTTACAATTTTACAGAACT+CGG | + | chr8.4:3846191-3846210 | MS.gene58071:intron | 20.0% |
| !!! | ATTTTCATAACATTGGTATA+AGG | + | chr8.4:3845294-3845313 | MS.gene58071:intron | 20.0% |
| !!! | TATTTTATATCTAAACCACA+CGG | + | chr8.4:3847436-3847455 | MS.gene58071:intron | 20.0% |
| !!! | TGTTATTTTTGTAAGTCTTT+AGG | + | chr8.4:3845577-3845596 | MS.gene58071:intron | 20.0% |
| !!! | TTACTTTCGATTTTTGAAAT+AGG | + | chr8.4:3844230-3844249 | MS.gene58071:intron | 20.0% |
| !!! | TTATTTCGAATGTTCATTTT+TGG | + | chr8.4:3845342-3845361 | MS.gene58071:intron | 20.0% |
| !!! | TTTTCTATGAAACATAAGAA+AGG | - | chr8.4:3846319-3846338 | None:intergenic | 20.0% |
| ! | AATTCGAAATAGAAATGGAA+TGG | - | chr8.4:3844194-3844213 | None:intergenic | 25.0% |
| ! | AGATATAAAATACACTTAGG+CGG | - | chr8.4:3847428-3847447 | None:intergenic | 25.0% |
| ! | AGCTACATTAAAAAGATCAT+TGG | - | chr8.4:3846237-3846256 | None:intergenic | 25.0% |
| ! | ATATCTGAATTCTTGTTCTT+TGG | + | chr8.4:3846354-3846373 | MS.gene58071:intron | 25.0% |
| ! | GATAGACAATTATCCAAATT+TGG | + | chr8.4:3845403-3845422 | MS.gene58071:intron | 25.0% |
| ! | TGTCTTGAATGTTGTTAATT+TGG | + | chr8.4:3845791-3845810 | MS.gene58071:intron | 25.0% |
| ! | TTCTGTCAAGATATAAATGA+TGG | - | chr8.4:3846722-3846741 | None:intergenic | 25.0% |
| !! | ATCTTTTTAATGTAGCTAGT+CGG | + | chr8.4:3846240-3846259 | MS.gene58071:intron | 25.0% |
| !! | ATTTTATATCTAAACCACAC+GGG | + | chr8.4:3847437-3847456 | MS.gene58071:intron | 25.0% |
| !! | TTGAATGTTGTTAATTTGGA+TGG | + | chr8.4:3845795-3845814 | MS.gene58071:intron | 25.0% |
| !!! | GCTGTTTTAATAAGATATCT+TGG | + | chr8.4:3844551-3844570 | MS.gene58071:intron | 25.0% |
| !!! | TCATTCCGATTTTGTTTTTT+CGG | + | chr8.4:3845840-3845859 | MS.gene58071:intron | 25.0% |
| AAAATAAGATATCAGCAGAG+TGG | - | chr8.4:3847379-3847398 | None:intergenic | 30.0% | |
| AAAATGGGGTAATATCCTAA+AGG | + | chr8.4:3846281-3846300 | MS.gene58071:intron | 30.0% | |
| AACATAAGAAAGGATGATCT+AGG | - | chr8.4:3846309-3846328 | None:intergenic | 30.0% | |
| AAGAAAAATAACCCAAGACA+AGG | - | chr8.4:3846767-3846786 | None:intergenic | 30.0% | |
| AAGGTCATAGTAAACCTTAA+AGG | + | chr8.4:3847094-3847113 | MS.gene58071:CDS | 30.0% | |
| AGCATTTGTACCAAAAAAGA+AGG | + | chr8.4:3847235-3847254 | MS.gene58071:intron | 30.0% | |
| ATAAAAAAACCAGTGGTTGA+TGG | + | chr8.4:3844973-3844992 | MS.gene58071:intron | 30.0% | |
| ATTTGAAGGAGCTTAAAATG+GGG | + | chr8.4:3846267-3846286 | MS.gene58071:CDS | 30.0% | |
| CAATGTTATGAAAATTGGAC+CGG | - | chr8.4:3845289-3845308 | None:intergenic | 30.0% | |
| CATAAGTAATATGTGCTCAA+AGG | - | chr8.4:3844725-3844744 | None:intergenic | 30.0% | |
| GAAATAGAAATGGAATGGAA+TGG | - | chr8.4:3844189-3844208 | None:intergenic | 30.0% | |
| GATTTGAAGGAGCTTAAAAT+GGG | + | chr8.4:3846266-3846285 | MS.gene58071:CDS | 30.0% | |
| GGTTCATAAAAAGTAAACTC+TGG | - | chr8.4:3846819-3846838 | None:intergenic | 30.0% | |
| TAAAGCATAAACCTTGTCTT+GGG | + | chr8.4:3846753-3846772 | MS.gene58071:intron | 30.0% | |
| TAAATATCTGCAGTGTGAAA+TGG | + | chr8.4:3845533-3845552 | MS.gene58071:intron | 30.0% | |
| TAAGAGCAAGAAAAAAAGAC+AGG | - | chr8.4:3845720-3845739 | None:intergenic | 30.0% | |
| TACTGCTCAAAGATAAACAT+AGG | + | chr8.4:3846675-3846694 | MS.gene58071:intron | 30.0% | |
| TATGTTTATCTTTGAGCAGT+AGG | - | chr8.4:3846676-3846695 | None:intergenic | 30.0% | |
| TATTGATCAGAGTCAGAATA+TGG | + | chr8.4:3844270-3844289 | MS.gene58071:CDS | 30.0% | |
| TCAAAGATAAACATAGGAAG+TGG | + | chr8.4:3846681-3846700 | MS.gene58071:intron | 30.0% | |
| TCTATCATATAGGCATGATT+TGG | + | chr8.4:3844376-3844395 | MS.gene58071:intron | 30.0% | |
| TTAAAGCATAAACCTTGTCT+TGG | + | chr8.4:3846752-3846771 | MS.gene58071:intron | 30.0% | |
| TTAGAATACGTACCTAAGTT+TGG | - | chr8.4:3844153-3844172 | None:intergenic | 30.0% | |
| TTATTGCCGTACATTCTTAT+GGG | + | chr8.4:3846469-3846488 | MS.gene58071:intron | 30.0% | |
| TTCATAACATTGGTATAAGG+TGG | + | chr8.4:3845297-3845316 | MS.gene58071:intron | 30.0% | |
| TTCATTATTCTAACAACAGG+AGG | - | chr8.4:3844823-3844842 | None:intergenic | 30.0% | |
| TTGACTCAGTTCTATCATAT+AGG | + | chr8.4:3844366-3844385 | MS.gene58071:intron | 30.0% | |
| TTGTGTTAAGTGAAAGTCAA+AGG | - | chr8.4:3845957-3845976 | None:intergenic | 30.0% | |
| TTTATTAGAGAATAGATGCG+AGG | - | chr8.4:3843958-3843977 | None:intergenic | 30.0% | |
| TTTCATGAAACAACGTGTTT+GGG | - | chr8.4:3845925-3845944 | None:intergenic | 30.0% | |
| ! | ATGTTGTTAATTTGGATGGT+AGG | + | chr8.4:3845799-3845818 | MS.gene58071:intron | 30.0% |
| ! | CTGGTAAGCATTGTATTTAT+TGG | + | chr8.4:3846147-3846166 | MS.gene58071:intron | 30.0% |
| ! | TCAAGTGTATTCAGATCTTT+TGG | + | chr8.4:3847054-3847073 | MS.gene58071:intron | 30.0% |
| !! | ATTCTTTTTCACGACCTTTA+AGG | - | chr8.4:3847111-3847130 | None:intergenic | 30.0% |
| !! | ATTTTTGAATGATGGTGACA+AGG | + | chr8.4:3846976-3846995 | MS.gene58071:CDS | 30.0% |
| !! | GTTCCAATTTTAATGTGACA+GGG | + | chr8.4:3845468-3845487 | MS.gene58071:intron | 30.0% |
| !! | TAAAAAGTAAACTCTGGAAC+TGG | - | chr8.4:3846813-3846832 | None:intergenic | 30.0% |
| !! | TGAACTGATTTGAAACAGTT+GGG | - | chr8.4:3844669-3844688 | None:intergenic | 30.0% |
| !! | TTATGAAGATGTTTTTGTCG+CGG | - | chr8.4:3847499-3847518 | None:intergenic | 30.0% |
| !! | TTCCAATTTTAATGTGACAG+GGG | + | chr8.4:3845469-3845488 | MS.gene58071:intron | 30.0% |
| !!! | ATTCCGATTTTGTTTTTTCG+GGG | + | chr8.4:3845842-3845861 | MS.gene58071:intron | 30.0% |
| !!! | CATTCCGATTTTGTTTTTTC+GGG | + | chr8.4:3845841-3845860 | MS.gene58071:intron | 30.0% |
| !!! | GCCGTTTTTTAAGATTAAGA+TGG | + | chr8.4:3845609-3845628 | MS.gene58071:intron | 30.0% |
| !!! | TTCTGCACTTCAGTTTTATT+TGG | - | chr8.4:3847530-3847549 | None:intergenic | 30.0% |
| AAGGTCGTGAAAAAGAATTC+AGG | + | chr8.4:3847113-3847132 | MS.gene58071:CDS | 35.0% | |
| AATATGTGCTCAAAGGTCAA+TGG | - | chr8.4:3844718-3844737 | None:intergenic | 35.0% | |
| AATCAGAAGAATCTCTTGGT+GGG | + | chr8.4:3845975-3845994 | MS.gene58071:intron | 35.0% | |
| AATCAGATTTGACCCATTCT+TGG | + | chr8.4:3846382-3846401 | MS.gene58071:intron | 35.0% | |
| AATTGGTCCATAACCAAGAA+TGG | - | chr8.4:3846398-3846417 | None:intergenic | 35.0% | |
| ACACAATCAGAAGAATCTCT+TGG | + | chr8.4:3845971-3845990 | MS.gene58071:intron | 35.0% | |
| ACTCTGATCAATAAGCCTAA+CGG | - | chr8.4:3844263-3844282 | None:intergenic | 35.0% | |
| ACTTGTGGCTACTTAATGAT+TGG | - | chr8.4:3845371-3845390 | None:intergenic | 35.0% | |
| AGAATGGGTCAAATCTGATT+AGG | - | chr8.4:3846382-3846401 | None:intergenic | 35.0% | |
| AGGATTAAACAAACTCCTCT+TGG | - | chr8.4:3846656-3846675 | None:intergenic | 35.0% | |
| AGGGAGAAGATTGAAAATTG+AGG | - | chr8.4:3843998-3844017 | None:intergenic | 35.0% | |
| ATCATTAAGTAGCCACAAGT+AGG | + | chr8.4:3845371-3845390 | MS.gene58071:intron | 35.0% | |
| ATGACATGACACAATTGCAT+AGG | + | chr8.4:3844742-3844761 | MS.gene58071:intron | 35.0% | |
| ATTGGTCCATAACCAAGAAT+GGG | - | chr8.4:3846397-3846416 | None:intergenic | 35.0% | |
| ATTTGACCCATTCTTGGTTA+TGG | + | chr8.4:3846388-3846407 | MS.gene58071:intron | 35.0% | |
| CTTTCATGAAACAACGTGTT+TGG | - | chr8.4:3845926-3845945 | None:intergenic | 35.0% | |
| GAAACGCTATACACCAAATT+TGG | - | chr8.4:3845419-3845438 | None:intergenic | 35.0% | |
| GATTGAAAATTGAGGGAATG+AGG | - | chr8.4:3843990-3844009 | None:intergenic | 35.0% | |
| GCTAGACAATGATACAACTA+AGG | - | chr8.4:3845077-3845096 | None:intergenic | 35.0% | |
| GGATTTGAAGGAGCTTAAAA+TGG | + | chr8.4:3846265-3846284 | MS.gene58071:CDS | 35.0% | |
| GGGAGAAGATTGAAAATTGA+GGG | - | chr8.4:3843997-3844016 | None:intergenic | 35.0% | |
| GTAAACCCCATAAGAATGTA+CGG | - | chr8.4:3846478-3846497 | None:intergenic | 35.0% | |
| GTTATTGCCGTACATTCTTA+TGG | + | chr8.4:3846468-3846487 | MS.gene58071:intron | 35.0% | |
| TATTGCCGTACATTCTTATG+GGG | + | chr8.4:3846470-3846489 | MS.gene58071:intron | 35.0% | |
| TGAAGATGCTGAACTTGATT+TGG | + | chr8.4:3844330-3844349 | MS.gene58071:CDS | 35.0% | |
| TGCAGATACTATTACCTACA+GGG | - | chr8.4:3844791-3844810 | None:intergenic | 35.0% | |
| TGCTTCTTGGTTATGAACTT+GGG | + | chr8.4:3846610-3846629 | MS.gene58071:intron | 35.0% | |
| TTACTCTATGTTCTCTTGGA+AGG | + | chr8.4:3846494-3846513 | MS.gene58071:intron | 35.0% | |
| TTATGAACTTGGGTTCAGTT+AGG | + | chr8.4:3846620-3846639 | MS.gene58071:intron | 35.0% | |
| TTGCTTCTTGGTTATGAACT+TGG | + | chr8.4:3846609-3846628 | MS.gene58071:intron | 35.0% | |
| ! | AATGAGTATTGCGAATGCAA+GGG | + | chr8.4:3844606-3844625 | MS.gene58071:intron | 35.0% |
| ! | ATTGTTCACAACTTGCTTCT+TGG | + | chr8.4:3846597-3846616 | MS.gene58071:intron | 35.0% |
| ! | CGGTCCAATTTTCATAACAT+TGG | + | chr8.4:3845287-3845306 | MS.gene58071:intron | 35.0% |
| ! | GCACGGAAATTTTTGAATGA+TGG | + | chr8.4:3846968-3846987 | MS.gene58071:CDS | 35.0% |
| ! | TAATGAGTATTGCGAATGCA+AGG | + | chr8.4:3844605-3844624 | MS.gene58071:intron | 35.0% |
| ! | TTTTAATGTAGCTAGTCGGA+TGG | + | chr8.4:3846244-3846263 | MS.gene58071:intron | 35.0% |
| !! | GGATTGATTGAGCTATTTCT+AGG | + | chr8.4:3844627-3844646 | MS.gene58071:intron | 35.0% |
| !! | GGTTCCAATTTTAATGTGAC+AGG | + | chr8.4:3845467-3845486 | MS.gene58071:intron | 35.0% |
| !! | GTGAACTGATTTGAAACAGT+TGG | - | chr8.4:3844670-3844689 | None:intergenic | 35.0% |
| !!! | GGTTTGGATGGTTAGTTTTT+TGG | + | chr8.4:3845222-3845241 | MS.gene58071:intron | 35.0% |
| ACATAGGAAGTGGCAAATGT+CGG | + | chr8.4:3846691-3846710 | MS.gene58071:intron | 40.0% | |
| ACTAAGGTTGAACCACTGAA+CGG | - | chr8.4:3845061-3845080 | None:intergenic | 40.0% | |
| AGTAGCCACAAGTAGGTTAT+AGG | + | chr8.4:3845378-3845397 | MS.gene58071:intron | 40.0% | |
| ATACGTACCTAAGTTTGGAG+AGG | - | chr8.4:3844148-3844167 | None:intergenic | 40.0% | |
| ATCAGAAGAATCTCTTGGTG+GGG | + | chr8.4:3845976-3845995 | MS.gene58071:intron | 40.0% | |
| ATCGTCCTATAACCTACTTG+TGG | - | chr8.4:3845386-3845405 | None:intergenic | 40.0% | |
| CAATCAGAAGAATCTCTTGG+TGG | + | chr8.4:3845974-3845993 | MS.gene58071:intron | 40.0% | |
| CCACCCCGAAAAAACAAAAT+CGG | - | chr8.4:3845848-3845867 | None:intergenic | 40.0% | |
| CTACAACTCAAAACTAACGC+TGG | - | chr8.4:3846840-3846859 | None:intergenic | 40.0% | |
| CTCCCCTGTCACATTAAAAT+TGG | - | chr8.4:3845474-3845493 | None:intergenic | 40.0% | |
| CTGCAGATACTATTACCTAC+AGG | - | chr8.4:3844792-3844811 | None:intergenic | 40.0% | |
| GAAATAGGTCGAATACCGTT+AGG | + | chr8.4:3844245-3844264 | MS.gene58071:intron | 40.0% | |
| GATCAGAGTCAGAATATGGT+TGG | + | chr8.4:3844274-3844293 | MS.gene58071:CDS | 40.0% | |
| GCAGATACTATTACCTACAG+GGG | - | chr8.4:3844790-3844809 | None:intergenic | 40.0% | |
| GGGTTTACTCTATGTTCTCT+TGG | + | chr8.4:3846490-3846509 | MS.gene58071:intron | 40.0% | |
| GTAGGTAATAGTATCTGCAG+AGG | + | chr8.4:3844792-3844811 | MS.gene58071:intron | 40.0% | |
| GTATCTGTAAAGCACGTCAT+AGG | - | chr8.4:3847262-3847281 | None:intergenic | 40.0% | |
| GTGCTTTACAGATACTCTCT+TGG | + | chr8.4:3847267-3847286 | MS.gene58071:intron | 40.0% | |
| TCATCGTCAGCATCTTTGTT+AGG | - | chr8.4:3844113-3844132 | None:intergenic | 40.0% | |
| TCATCTGCTTCAGCTTTCTT+TGG | - | chr8.4:3847566-3847585 | None:intergenic | 40.0% | |
| TCTTGATCAGGCAATTCGAA+TGG | + | chr8.4:3844306-3844325 | MS.gene58071:CDS | 40.0% | |
| TGGAGTAGTATCTCTTGATC+AGG | + | chr8.4:3844294-3844313 | MS.gene58071:CDS | 40.0% | |
| TGGTATAAGGTGGTCATGTA+AGG | + | chr8.4:3845307-3845326 | MS.gene58071:intron | 40.0% | |
| TTTGTAATGCCATCAACCAC+TGG | - | chr8.4:3844985-3845004 | None:intergenic | 40.0% | |
| ! | AATCGGTTCAGTCATTGAAC+TGG | + | chr8.4:3845019-3845038 | MS.gene58071:intron | 40.0% |
| ! | AGACGTTTTCAGAACGATGT+TGG | + | chr8.4:3847157-3847176 | MS.gene58071:CDS | 40.0% |
| ! | GACGTTTTCAGAACGATGTT+GGG | + | chr8.4:3847158-3847177 | MS.gene58071:CDS | 40.0% |
| ! | TCTTTTGGATCAATTGCTGC+AGG | + | chr8.4:3847069-3847088 | MS.gene58071:intron | 40.0% |
| ! | TTTGAGTTTAACGGGAACGA+CGG | - | chr8.4:3843934-3843953 | None:intergenic | 40.0% |
| ! | TTTTCAGAACGATGTTGGGA+AGG | + | chr8.4:3847162-3847181 | MS.gene58071:CDS | 40.0% |
| !! | ATAAGGAACGCTGACTTTCA+AGG | - | chr8.4:3846056-3846075 | None:intergenic | 40.0% |
| !! | ATGCGAGGCTTTGAGTTTAA+CGG | - | chr8.4:3843943-3843962 | None:intergenic | 40.0% |
| !! | CTAGCCTTATGCAACTACTT+GGG | + | chr8.4:3845445-3845464 | MS.gene58071:intron | 40.0% |
| !! | GCTTTCTTTGGTGTTTCTTG+AGG | - | chr8.4:3847554-3847573 | None:intergenic | 40.0% |
| !! | TAGCCTTATGCAACTACTTG+GGG | + | chr8.4:3845446-3845465 | MS.gene58071:intron | 40.0% |
| !! | TCTAGCCTTATGCAACTACT+TGG | + | chr8.4:3845444-3845463 | MS.gene58071:intron | 40.0% |
| !!! | CGATTTTGTTTTTTCGGGGT+GGG | + | chr8.4:3845846-3845865 | MS.gene58071:intron | 40.0% |
| !!! | CGTCATAGGACCTTCTTTTT+TGG | - | chr8.4:3847248-3847267 | None:intergenic | 40.0% |
| !!! | GATTTTGTTTTTTCGGGGTG+GGG | + | chr8.4:3845847-3845866 | MS.gene58071:intron | 40.0% |
| AGCTGAAGCAGATGAAGTCT+CGG | + | chr8.4:3847571-3847590 | MS.gene58071:CDS | 45.0% | |
| AGGATGATCTAGGCTCCTTT+AGG | - | chr8.4:3846299-3846318 | None:intergenic | 45.0% | |
| CATAGGAAGTGGCAAATGTC+GGG | + | chr8.4:3846692-3846711 | MS.gene58071:intron | 45.0% | |
| CTCACTTGCATACTTACTCG+CGG | + | chr8.4:3846029-3846048 | MS.gene58071:intron | 45.0% | |
| CTGTACGTTTGAAAGCTGCA+CGG | + | chr8.4:3846951-3846970 | MS.gene58071:CDS | 45.0% | |
| GAACCCCAAGTAGTTGCATA+AGG | - | chr8.4:3845452-3845471 | None:intergenic | 45.0% | |
| GAGGTTAACACCGTAACGAA+CGG | - | chr8.4:3844045-3844064 | None:intergenic | 45.0% | |
| GAGTAAGTATGCAAGTGAGC+AGG | - | chr8.4:3846028-3846047 | None:intergenic | 45.0% | |
| GGATCAATTGCTGCAGGTTA+AGG | + | chr8.4:3847075-3847094 | MS.gene58071:intron | 45.0% | |
| GTTATGAAAATTGGACCGGC+TGG | - | chr8.4:3845285-3845304 | None:intergenic | 45.0% | |
| TCAGCATCTTTGTTAGGAGG+AGG | - | chr8.4:3844107-3844126 | None:intergenic | 45.0% | |
| TCGACCAGAACATAGCAAAG+CGG | - | chr8.4:3847197-3847216 | None:intergenic | 45.0% | |
| TCGTCAGCATCTTTGTTAGG+AGG | - | chr8.4:3844110-3844129 | None:intergenic | 45.0% | |
| TGGGAAGGAAGAGTGAATGA+GGG | - | chr8.4:3844017-3844036 | None:intergenic | 45.0% | |
| TTAGGAAACGACACACCAAG+AGG | + | chr8.4:3846638-3846657 | MS.gene58071:intron | 45.0% | |
| TTGATTAGACTCCTCCTGAC+TGG | + | chr8.4:3845251-3845270 | MS.gene58071:intron | 45.0% | |
| TTTAATGTGACAGGGGAGAG+TGG | + | chr8.4:3845476-3845495 | MS.gene58071:intron | 45.0% | |
| ! | AGCTAGTCGGATGGATTTGA+AGG | + | chr8.4:3846253-3846272 | MS.gene58071:intron | 45.0% |
| ! | GATCAGCAGAAGAAAAGTGC+TGG | + | chr8.4:3846128-3846147 | MS.gene58071:CDS | 45.0% |
| !! | AAAATTGGACCGGCTGGTTT+GGG | - | chr8.4:3845279-3845298 | None:intergenic | 45.0% |
| !! | TGCGAGGCTTTGAGTTTAAC+GGG | - | chr8.4:3843942-3843961 | None:intergenic | 45.0% |
| !!! | CCGATTTTGTTTTTTCGGGG+TGG | + | chr8.4:3845845-3845864 | MS.gene58071:intron | 45.0% |
| !! | TATAAAATGATTATATTATA+TGG | + | chr8.4:3845201-3845220 | MS.gene58071:intron | 5.0% |
| ACAGGGGAGAGTGGTAGTAA+AGG | + | chr8.4:3845485-3845504 | MS.gene58071:intron | 50.0% | |
| CTCTCGACCTCTCCAAACTT+AGG | + | chr8.4:3844138-3844157 | MS.gene58071:CDS | 50.0% | |
| GACACTCATTCACCGTTCAG+TGG | + | chr8.4:3845046-3845065 | MS.gene58071:intron | 50.0% | |
| GGGAGAGTGGTAGTAAAGGT+GGG | + | chr8.4:3845489-3845508 | MS.gene58071:intron | 50.0% | |
| GTGGGAAGGAAGAGTGAATG+AGG | - | chr8.4:3844018-3844037 | None:intergenic | 50.0% | |
| GTTGTGTGTGTGTGTGTGTG+TGG | - | chr8.4:3844918-3844937 | None:intergenic | 50.0% | |
| TACCTACAGGGGAAAGAGAG+TGG | - | chr8.4:3844779-3844798 | None:intergenic | 50.0% | |
| TCATGTGCAGCTTGCAACAG+AGG | + | chr8.4:3847460-3847479 | MS.gene58071:intron | 50.0% | |
| TTCCACTCTCTTTCCCCTGT+AGG | + | chr8.4:3844774-3844793 | MS.gene58071:intron | 50.0% | |
| ! | GAAAATTGGACCGGCTGGTT+TGG | - | chr8.4:3845280-3845299 | None:intergenic | 50.0% |
| ! | GGTAGTAAAGGTGGGAGCAT+TGG | + | chr8.4:3845497-3845516 | MS.gene58071:intron | 50.0% |
| !! | GATGCCGCTTTGCTATGTTC+TGG | + | chr8.4:3847190-3847209 | MS.gene58071:intron | 50.0% |
| ACCGTAACGAACGGTTGCGT+GGG | - | chr8.4:3844036-3844055 | None:intergenic | 55.0% | |
| GAGTTTAACGGGAACGACGG+TGG | - | chr8.4:3843931-3843950 | None:intergenic | 55.0% | |
| GGGGAGAGTGGTAGTAAAGG+TGG | + | chr8.4:3845488-3845507 | MS.gene58071:intron | 55.0% | |
| TAACGAACGGTTGCGTGGGA+AGG | - | chr8.4:3844032-3844051 | None:intergenic | 55.0% | |
| TCCCACGCAACCGTTCGTTA+CGG | + | chr8.4:3844032-3844051 | MS.gene58071:CDS | 55.0% | |
| TGTGCAGCTTGCAACAGAGG+AGG | + | chr8.4:3847463-3847482 | MS.gene58071:intron | 55.0% | |
| TTTAACGGGAACGACGGTGG+TGG | - | chr8.4:3843928-3843947 | None:intergenic | 55.0% | |
| ! | GCGTGTGTGGGTGCTATAAG+CGG | - | chr8.4:3844420-3844439 | None:intergenic | 55.0% |
| AACCTCCGTCCTTCCGCCTA+CGG | + | chr8.4:3844059-3844078 | MS.gene58071:CDS | 60.0% | |
| CAAGCTGCACATGACCCGTG+TGG | - | chr8.4:3847454-3847473 | None:intergenic | 60.0% | |
| CACCGTAACGAACGGTTGCG+TGG | - | chr8.4:3844037-3844056 | None:intergenic | 60.0% | |
| GTGTGTGTGTGCGCGTGTGT+GGG | - | chr8.4:3844432-3844451 | None:intergenic | 60.0% | |
| TGTGTGTGTGTGCGCGTGTG+TGG | - | chr8.4:3844433-3844452 | None:intergenic | 60.0% | |
| ! | TGACTGGCTCCCAAACCAGC+CGG | + | chr8.4:3845267-3845286 | MS.gene58071:intron | 60.0% |
| ! | TGGTTTGGGAGCCAGTCAGG+AGG | - | chr8.4:3845265-3845284 | None:intergenic | 60.0% |
| GAAGTTGCCACCGCCACCGT+AGG | - | chr8.4:3844078-3844097 | None:intergenic | 65.0% | |
| ! | AACGGGAACGACGGTGGTGG+TGG | - | chr8.4:3843925-3843944 | None:intergenic | 65.0% |
| !! | GGCTGGTTTGGGAGCCAGTC+AGG | - | chr8.4:3845268-3845287 | None:intergenic | 65.0% |
| CACCGTAGGCGGAAGGACGG+AGG | - | chr8.4:3844064-3844083 | None:intergenic | 70.0% | |
| CGCCACCGTAGGCGGAAGGA+CGG | - | chr8.4:3844067-3844086 | None:intergenic | 70.0% | |
| CGTCCTTCCGCCTACGGTGG+CGG | + | chr8.4:3844065-3844084 | MS.gene58071:CDS | 70.0% | |
| CTCCGTCCTTCCGCCTACGG+TGG | + | chr8.4:3844062-3844081 | MS.gene58071:CDS | 70.0% | |
| GTTGCCACCGCCACCGTAGG+CGG | - | chr8.4:3844075-3844094 | None:intergenic | 70.0% | |
| CCACCGCCACCGTAGGCGGA+AGG | - | chr8.4:3844071-3844090 | None:intergenic | 75.0% | |
| ! | CCTTCCGCCTACGGTGGCGG+TGG | + | chr8.4:3844068-3844087 | MS.gene58071:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 3843909 | 3847610 | 3843909 | ID=MS.gene58071 |
| chr8.4 | mRNA | 3843909 | 3847610 | 3843909 | ID=MS.gene58071.t1;Parent=MS.gene58071 |
| chr8.4 | exon | 3843909 | 3844159 | 3843909 | ID=MS.gene58071.t1.exon1;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3843909 | 3844159 | 3843909 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3844252 | 3844351 | 3844252 | ID=MS.gene58071.t1.exon2;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3844252 | 3844351 | 3844252 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3844796 | 3844848 | 3844796 | ID=MS.gene58071.t1.exon3;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3844796 | 3844848 | 3844796 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3846094 | 3846149 | 3846094 | ID=MS.gene58071.t1.exon4;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3846094 | 3846149 | 3846094 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3846255 | 3846288 | 3846255 | ID=MS.gene58071.t1.exon5;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3846255 | 3846288 | 3846255 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3846925 | 3846997 | 3846925 | ID=MS.gene58071.t1.exon6;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3846925 | 3846997 | 3846925 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3847091 | 3847183 | 3847091 | ID=MS.gene58071.t1.exon7;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3847091 | 3847183 | 3847091 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| chr8.4 | exon | 3847470 | 3847610 | 3847470 | ID=MS.gene58071.t1.exon8;Parent=MS.gene58071.t1 |
| chr8.4 | CDS | 3847470 | 3847610 | 3847470 | ID=cds.MS.gene58071.t1;Parent=MS.gene58071.t1 |
| Gene Sequence |
| Protein sequence |
