Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58210.t1 | XP_003610263.1 | 93.7 | 126 | 6 | 1 | 1 | 126 | 1 | 124 | 1.00E-49 | 206.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58210.t1 | P23326 | 55.8 | 138 | 47 | 5 | 1 | 126 | 1 | 136 | 7.4e-20 | 98.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58210.t1 | B7FGY3 | 93.7 | 126 | 6 | 1 | 1 | 126 | 1 | 124 | 7.5e-50 | 206.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene58210 | 0.823237 | 1.54E-53 | -1.69E-46 |
MS.gene049284 | MS.gene58210 | 0.824026 | 1.01E-53 | -1.69E-46 |
MS.gene049351 | MS.gene58210 | 0.865851 | 4.37E-65 | -1.69E-46 |
MS.gene049427 | MS.gene58210 | 0.847116 | 1.42E-59 | -1.69E-46 |
MS.gene049491 | MS.gene58210 | 0.836378 | 9.69E-57 | -1.69E-46 |
MS.gene049614 | MS.gene58210 | 0.844769 | 6.16E-59 | -1.69E-46 |
MS.gene049661 | MS.gene58210 | 0.85319 | 2.81E-61 | -1.69E-46 |
MS.gene049662 | MS.gene58210 | 0.853997 | 1.65E-61 | -1.69E-46 |
MS.gene049758 | MS.gene58210 | 0.840081 | 1.08E-57 | -1.69E-46 |
MS.gene049760 | MS.gene58210 | 0.818043 | 2.41E-52 | -1.69E-46 |
MS.gene049805 | MS.gene58210 | 0.844761 | 6.19E-59 | -1.69E-46 |
MS.gene049910 | MS.gene58210 | 0.802773 | 4.78E-49 | -1.69E-46 |
MS.gene050076 | MS.gene58210 | 0.891621 | 3.36E-74 | -1.69E-46 |
MS.gene050231 | MS.gene58210 | 0.819684 | 1.02E-52 | -1.69E-46 |
MS.gene050301 | MS.gene58210 | 0.878986 | 1.80E-69 | -1.69E-46 |
MS.gene050397 | MS.gene58210 | 0.823699 | 1.20E-53 | -1.69E-46 |
MS.gene050432 | MS.gene58210 | 0.868915 | 4.58E-66 | -1.69E-46 |
MS.gene050529 | MS.gene58210 | 0.838503 | 2.77E-57 | -1.69E-46 |
MS.gene05053 | MS.gene58210 | 0.808465 | 3.06E-50 | -1.69E-46 |
MS.gene050670 | MS.gene58210 | 0.841293 | 5.19E-58 | -1.69E-46 |
MS.gene050767 | MS.gene58210 | 0.862625 | 4.44E-64 | -1.69E-46 |
MS.gene050770 | MS.gene58210 | 0.863437 | 2.49E-64 | -1.69E-46 |
MS.gene050783 | MS.gene58210 | 0.817796 | 2.74E-52 | -1.69E-46 |
MS.gene050812 | MS.gene58210 | 0.840346 | 9.19E-58 | -1.69E-46 |
MS.gene05101 | MS.gene58210 | 0.874547 | 6.20E-68 | -1.69E-46 |
MS.gene05105 | MS.gene58210 | 0.83517 | 1.96E-56 | -1.69E-46 |
MS.gene051387 | MS.gene58210 | 0.839541 | 1.49E-57 | -1.69E-46 |
MS.gene051471 | MS.gene58210 | 0.877873 | 4.43E-69 | -1.69E-46 |
MS.gene051582 | MS.gene58210 | 0.849583 | 2.95E-60 | -1.69E-46 |
MS.gene051666 | MS.gene58210 | 0.840181 | 1.01E-57 | -1.69E-46 |
MS.gene051692 | MS.gene58210 | 0.800661 | 1.30E-48 | -1.69E-46 |
MS.gene051877 | MS.gene58210 | 0.829649 | 4.57E-55 | -1.69E-46 |
MS.gene052078 | MS.gene58210 | 0.864638 | 1.05E-64 | -1.69E-46 |
MS.gene052178 | MS.gene58210 | 0.821694 | 3.52E-53 | -1.69E-46 |
MS.gene052188 | MS.gene58210 | 0.843041 | 1.79E-58 | -1.69E-46 |
MS.gene052253 | MS.gene58210 | 0.83023 | 3.30E-55 | -1.69E-46 |
MS.gene052271 | MS.gene58210 | 0.803032 | 4.23E-49 | -1.69E-46 |
MS.gene052290 | MS.gene58210 | 0.871484 | 6.60E-67 | -1.69E-46 |
MS.gene052310 | MS.gene58210 | 0.878737 | 2.20E-69 | -1.69E-46 |
MS.gene052322 | MS.gene58210 | 0.834868 | 2.34E-56 | -1.69E-46 |
MS.gene052326 | MS.gene58210 | 0.893732 | 4.78E-75 | -1.69E-46 |
MS.gene052340 | MS.gene58210 | 0.829402 | 5.25E-55 | -1.69E-46 |
MS.gene052379 | MS.gene58210 | 0.826155 | 3.17E-54 | -1.69E-46 |
MS.gene052421 | MS.gene58210 | 0.855846 | 4.79E-62 | -1.69E-46 |
MS.gene052481 | MS.gene58210 | 0.821161 | 4.68E-53 | -1.69E-46 |
MS.gene052484 | MS.gene58210 | 0.804119 | 2.52E-49 | -1.69E-46 |
MS.gene052485 | MS.gene58210 | 0.849957 | 2.32E-60 | -1.69E-46 |
MS.gene052615 | MS.gene58210 | 0.802445 | 5.59E-49 | -1.69E-46 |
MS.gene053103 | MS.gene58210 | 0.88947 | 2.35E-73 | -1.69E-46 |
MS.gene053104 | MS.gene58210 | 0.842749 | 2.14E-58 | -1.69E-46 |
MS.gene053209 | MS.gene58210 | 0.843712 | 1.18E-58 | -1.69E-46 |
MS.gene053322 | MS.gene58210 | 0.890079 | 1.36E-73 | -1.69E-46 |
MS.gene053557 | MS.gene58210 | 0.811399 | 7.14E-51 | -1.69E-46 |
MS.gene053813 | MS.gene58210 | 0.81769 | 2.89E-52 | -1.69E-46 |
MS.gene053836 | MS.gene58210 | 0.864031 | 1.63E-64 | -1.69E-46 |
MS.gene053915 | MS.gene58210 | 0.800804 | 1.21E-48 | -1.69E-46 |
MS.gene053971 | MS.gene58210 | 0.810789 | 9.68E-51 | -1.69E-46 |
MS.gene054123 | MS.gene58210 | 0.857856 | 1.23E-62 | -1.69E-46 |
MS.gene054376 | MS.gene58210 | 0.844369 | 7.89E-59 | -1.69E-46 |
MS.gene054473 | MS.gene58210 | 0.808404 | 3.15E-50 | -1.69E-46 |
MS.gene05455 | MS.gene58210 | 0.834003 | 3.85E-56 | -1.69E-46 |
MS.gene054802 | MS.gene58210 | 0.868176 | 7.93E-66 | -1.69E-46 |
MS.gene054803 | MS.gene58210 | 0.866962 | 1.94E-65 | -1.69E-46 |
MS.gene054804 | MS.gene58210 | 0.868848 | 4.81E-66 | -1.69E-46 |
MS.gene05505 | MS.gene58210 | 0.833238 | 5.98E-56 | -1.69E-46 |
MS.gene055116 | MS.gene58210 | 0.825314 | 5.02E-54 | -1.69E-46 |
MS.gene055254 | MS.gene58210 | 0.806008 | 1.01E-49 | -1.69E-46 |
MS.gene055277 | MS.gene58210 | 0.904423 | 1.25E-79 | -1.69E-46 |
MS.gene055390 | MS.gene58210 | 0.855056 | 8.15E-62 | -1.69E-46 |
MS.gene055397 | MS.gene58210 | 0.83785 | 4.07E-57 | -1.69E-46 |
MS.gene055412 | MS.gene58210 | 0.898848 | 3.55E-77 | -1.69E-46 |
MS.gene055422 | MS.gene58210 | 0.878568 | 2.53E-69 | -1.69E-46 |
MS.gene055428 | MS.gene58210 | 0.8844 | 1.98E-71 | -1.69E-46 |
MS.gene055499 | MS.gene58210 | 0.84067 | 7.56E-58 | -1.69E-46 |
MS.gene055647 | MS.gene58210 | 0.803679 | 3.11E-49 | -1.69E-46 |
MS.gene055896 | MS.gene58210 | 0.816407 | 5.62E-52 | -1.69E-46 |
MS.gene05592 | MS.gene58210 | 0.831137 | 1.98E-55 | -1.69E-46 |
MS.gene056191 | MS.gene58210 | 0.82191 | 3.14E-53 | -1.69E-46 |
MS.gene056407 | MS.gene58210 | 0.872366 | 3.36E-67 | -1.69E-46 |
MS.gene056410 | MS.gene58210 | 0.815219 | 1.03E-51 | -1.69E-46 |
MS.gene056609 | MS.gene58210 | 0.819063 | 1.41E-52 | -1.69E-46 |
MS.gene056612 | MS.gene58210 | 0.836237 | 1.05E-56 | -1.69E-46 |
MS.gene056659 | MS.gene58210 | 0.815653 | 8.28E-52 | -1.69E-46 |
MS.gene056796 | MS.gene58210 | 0.824517 | 7.73E-54 | -1.69E-46 |
MS.gene056897 | MS.gene58210 | 0.802619 | 5.15E-49 | -1.69E-46 |
MS.gene056931 | MS.gene58210 | 0.800799 | 1.22E-48 | -1.69E-46 |
MS.gene057011 | MS.gene58210 | 0.89388 | 4.16E-75 | -1.69E-46 |
MS.gene05702 | MS.gene58210 | 0.845199 | 4.71E-59 | -1.69E-46 |
MS.gene057121 | MS.gene58210 | 0.809507 | 1.83E-50 | -1.69E-46 |
MS.gene057123 | MS.gene58210 | 0.867922 | 9.57E-66 | -1.69E-46 |
MS.gene057124 | MS.gene58210 | 0.810131 | 1.34E-50 | -1.69E-46 |
MS.gene057129 | MS.gene58210 | 0.870075 | 1.92E-66 | -1.69E-46 |
MS.gene057146 | MS.gene58210 | 0.852127 | 5.66E-61 | -1.69E-46 |
MS.gene057245 | MS.gene58210 | 0.816154 | 6.40E-52 | -1.69E-46 |
MS.gene057295 | MS.gene58210 | 0.834655 | 2.64E-56 | -1.69E-46 |
MS.gene05733 | MS.gene58210 | 0.838842 | 2.26E-57 | -1.69E-46 |
MS.gene057416 | MS.gene58210 | 0.826022 | 3.41E-54 | -1.69E-46 |
MS.gene057749 | MS.gene58210 | 0.812804 | 3.53E-51 | -1.69E-46 |
MS.gene057823 | MS.gene58210 | 0.822468 | 2.33E-53 | -1.69E-46 |
MS.gene058002 | MS.gene58210 | 0.84717 | 1.37E-59 | -1.69E-46 |
MS.gene058006 | MS.gene58210 | 0.808798 | 2.59E-50 | -1.69E-46 |
MS.gene058019 | MS.gene58210 | 0.812751 | 3.62E-51 | -1.69E-46 |
MS.gene058082 | MS.gene58210 | 0.814033 | 1.89E-51 | -1.69E-46 |
MS.gene05811 | MS.gene58210 | 0.835005 | 2.16E-56 | -1.69E-46 |
MS.gene058233 | MS.gene58210 | 0.880504 | 5.20E-70 | -1.69E-46 |
MS.gene058276 | MS.gene58210 | 0.80084 | 1.19E-48 | -1.69E-46 |
MS.gene058293 | MS.gene58210 | 0.914581 | 1.62E-84 | -1.69E-46 |
MS.gene058323 | MS.gene58210 | 0.804609 | 1.99E-49 | -1.69E-46 |
MS.gene058365 | MS.gene58210 | 0.844821 | 5.96E-59 | -1.69E-46 |
MS.gene058660 | MS.gene58210 | 0.914467 | 1.85E-84 | -1.69E-46 |
MS.gene058787 | MS.gene58210 | 0.820723 | 5.90E-53 | -1.69E-46 |
MS.gene058928 | MS.gene58210 | 0.821966 | 3.05E-53 | -1.69E-46 |
MS.gene05907 | MS.gene58210 | 0.845271 | 4.51E-59 | -1.69E-46 |
MS.gene059141 | MS.gene58210 | 0.8074 | 5.15E-50 | -1.69E-46 |
MS.gene059326 | MS.gene58210 | 0.807804 | 4.23E-50 | -1.69E-46 |
MS.gene059518 | MS.gene58210 | 0.81897 | 1.48E-52 | -1.69E-46 |
MS.gene059536 | MS.gene58210 | 0.847978 | 8.21E-60 | -1.69E-46 |
MS.gene059597 | MS.gene58210 | 0.88189 | 1.65E-70 | -1.69E-46 |
MS.gene05959 | MS.gene58210 | 0.826593 | 2.49E-54 | -1.69E-46 |
MS.gene059676 | MS.gene58210 | 0.870758 | 1.15E-66 | -1.69E-46 |
MS.gene059688 | MS.gene58210 | 0.887452 | 1.41E-72 | -1.69E-46 |
MS.gene059692 | MS.gene58210 | 0.891225 | 4.82E-74 | -1.69E-46 |
MS.gene059695 | MS.gene58210 | 0.893545 | 5.69E-75 | -1.69E-46 |
MS.gene059708 | MS.gene58210 | 0.826662 | 2.40E-54 | -1.69E-46 |
MS.gene059711 | MS.gene58210 | 0.812985 | 3.22E-51 | -1.69E-46 |
MS.gene05984 | MS.gene58210 | 0.837536 | 4.91E-57 | -1.69E-46 |
MS.gene059894 | MS.gene58210 | 0.861056 | 1.34E-63 | -1.69E-46 |
MS.gene059960 | MS.gene58210 | 0.876405 | 1.43E-68 | -1.69E-46 |
MS.gene06037 | MS.gene58210 | 0.818253 | 2.16E-52 | -1.69E-46 |
MS.gene060403 | MS.gene58210 | 0.825756 | 3.94E-54 | -1.69E-46 |
MS.gene060407 | MS.gene58210 | 0.80468 | 1.92E-49 | -1.69E-46 |
MS.gene060559 | MS.gene58210 | 0.804377 | 2.22E-49 | -1.69E-46 |
MS.gene060675 | MS.gene58210 | 0.802897 | 4.51E-49 | -1.69E-46 |
MS.gene060804 | MS.gene58210 | 0.846936 | 1.59E-59 | -1.69E-46 |
MS.gene060818 | MS.gene58210 | 0.81174 | 6.02E-51 | -1.69E-46 |
MS.gene060837 | MS.gene58210 | 0.808596 | 2.87E-50 | -1.69E-46 |
MS.gene06090 | MS.gene58210 | 0.827282 | 1.71E-54 | -1.69E-46 |
MS.gene06092 | MS.gene58210 | 0.810979 | 8.80E-51 | -1.69E-46 |
MS.gene061041 | MS.gene58210 | 0.814149 | 1.78E-51 | -1.69E-46 |
MS.gene061049 | MS.gene58210 | 0.873212 | 1.75E-67 | -1.69E-46 |
MS.gene061051 | MS.gene58210 | -0.845889 | 3.06E-59 | -1.69E-46 |
MS.gene061200 | MS.gene58210 | 0.870407 | 1.49E-66 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58210.t1 | MTR_4g130300 | 93.651 | 126 | 6 | 1 | 1 | 126 | 1 | 124 | 1.51e-66 | 198 |
MS.gene58210.t1 | MTR_4g130300 | 90.909 | 88 | 6 | 1 | 1 | 88 | 1 | 86 | 4.90e-48 | 150 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58210.t1 | AT2G24090 | 81.818 | 55 | 10 | 0 | 71 | 125 | 66 | 120 | 6.74e-25 | 92.8 |
Find 29 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGCATCAGCAAAGCGATTT+AGG | 0.147866 | 8.2:+4371423 | MS.gene58210:intron |
CAAGATTGAACAAACCATTT+TGG | 0.208259 | 8.2:-4371534 | None:intergenic |
GAAATTGAGACTCTCCAAAA+TGG | 0.323830 | 8.2:+4371520 | MS.gene58210:CDS |
GGCATCAGCAAAGCGATTTA+GGG | 0.327417 | 8.2:+4371424 | MS.gene58210:intron |
CGATTTAGGGTTACCGGTGC+TGG | 0.339311 | 8.2:+4371437 | MS.gene58210:CDS |
TAGTAACCATGGAATGGTTT+TGG | 0.345248 | 8.2:-4371263 | None:intergenic |
GCAAAGCGATTTAGGGTTAC+CGG | 0.390331 | 8.2:+4371431 | MS.gene58210:CDS |
TCAATTCCCTCAAACTCAAT+TGG | 0.415519 | 8.2:+4371211 | MS.gene58210:CDS |
AAAATCGTGCGTCGGAGAGC+AGG | 0.438969 | 8.2:+4371461 | MS.gene58210:CDS |
GAATTGACATTGTTTGAGAA+AGG | 0.445692 | 8.2:-4371195 | None:intergenic |
TACTAGACCAATTGAGTTTG+AGG | 0.451953 | 8.2:-4371218 | None:intergenic |
ACTAGACCAATTGAGTTTGA+GGG | 0.466679 | 8.2:-4371217 | None:intergenic |
CTCACTATCGTATCCGCTAA+AGG | 0.476723 | 8.2:+4371300 | MS.gene58210:CDS |
AGGATAGGATAGAACCTTGT+GGG | 0.517887 | 8.2:-4371337 | None:intergenic |
ACACACTCTTAACATGGCGT+TGG | 0.535399 | 8.2:+4371074 | None:intergenic |
TCTTAACCAAAACCATTCCA+TGG | 0.537305 | 8.2:+4371257 | MS.gene58210:CDS |
TTTCAATTTGTAGCCTTTAG+CGG | 0.541342 | 8.2:-4371313 | None:intergenic |
CATGGCGTTGGCTTCTGCAA+CGG | 0.545322 | 8.2:+4371086 | None:intergenic |
GCGAGGAGAAGTAGTAACCA+TGG | 0.549868 | 8.2:-4371274 | None:intergenic |
CGAGTAGAGGAAGAAGAAGA+TGG | 0.569694 | 8.2:-4371147 | None:intergenic |
GAGAAGTAGTAACCATGGAA+TGG | 0.608033 | 8.2:-4371269 | None:intergenic |
AAGTCTCAAGGCGGCAAAGG+AGG | 0.608560 | 8.2:-4371118 | None:intergenic |
TGAAAGTCTCAAGGCGGCAA+AGG | 0.614182 | 8.2:-4371121 | None:intergenic |
GTAGAGGAAGAAGAAGATGG+TGG | 0.614461 | 8.2:-4371144 | None:intergenic |
AGATGGTGGTGAAAGTCTCA+AGG | 0.634963 | 8.2:-4371130 | None:intergenic |
ACTGAAAGAGACACGAGTAG+AGG | 0.649199 | 8.2:-4371160 | None:intergenic |
GATACGATAGTGAGAGAGCG+AGG | 0.653895 | 8.2:-4371291 | None:intergenic |
CTACAAATTGAAAACCCACA+AGG | 0.682218 | 8.2:+4371323 | MS.gene58210:CDS |
TGGTGGTGAAAGTCTCAAGG+CGG | 0.774344 | 8.2:-4371127 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTGAATTTCATTTTTC+AGG | + | chr8.2:4371403-4371422 | MS.gene58210:intron | 15.0% |
! | ATACATAGTTAAACTTGAAG+TGG | - | chr8.2:4371372-4371391 | None:intergenic | 25.0% |
! | TACATAGTTAAACTTGAAGT+GGG | - | chr8.2:4371371-4371390 | None:intergenic | 25.0% |
! | TCTACAAAAAGAATAAGAAG+AGG | + | chr8.2:4371498-4371517 | MS.gene58210:CDS | 25.0% |
GAATTGACATTGTTTGAGAA+AGG | - | chr8.2:4371198-4371217 | None:intergenic | 30.0% | |
TTTCAATTTGTAGCCTTTAG+CGG | - | chr8.2:4371316-4371335 | None:intergenic | 30.0% | |
! | CAAGATTGAACAAACCATTT+TGG | - | chr8.2:4371537-4371556 | None:intergenic | 30.0% |
!!! | GAATGGTTTTGGTTAAGAAT+TGG | - | chr8.2:4371255-4371274 | None:intergenic | 30.0% |
ACTAGACCAATTGAGTTTGA+GGG | - | chr8.2:4371220-4371239 | None:intergenic | 35.0% | |
CTACAAATTGAAAACCCACA+AGG | + | chr8.2:4371323-4371342 | MS.gene58210:CDS | 35.0% | |
GAAATTGAGACTCTCCAAAA+TGG | + | chr8.2:4371520-4371539 | MS.gene58210:CDS | 35.0% | |
TACTAGACCAATTGAGTTTG+AGG | - | chr8.2:4371221-4371240 | None:intergenic | 35.0% | |
TCAATTCCCTCAAACTCAAT+TGG | + | chr8.2:4371211-4371230 | MS.gene58210:CDS | 35.0% | |
TCTTAACCAAAACCATTCCA+TGG | + | chr8.2:4371257-4371276 | MS.gene58210:CDS | 35.0% | |
! | TAGTAACCATGGAATGGTTT+TGG | - | chr8.2:4371266-4371285 | None:intergenic | 35.0% |
!!! | GTTTTGGTTAAGAATTGGAG+CGG | - | chr8.2:4371250-4371269 | None:intergenic | 35.0% |
AGGATAGGATAGAACCTTGT+GGG | - | chr8.2:4371340-4371359 | None:intergenic | 40.0% | |
GAGAAGTAGTAACCATGGAA+TGG | - | chr8.2:4371272-4371291 | None:intergenic | 40.0% | |
! | AAGTGGGTTTGAAAGAGGAT+AGG | - | chr8.2:4371355-4371374 | None:intergenic | 40.0% |
! | ACTTGAAGTGGGTTTGAAAG+AGG | - | chr8.2:4371360-4371379 | None:intergenic | 40.0% |
ACTGAAAGAGACACGAGTAG+AGG | - | chr8.2:4371163-4371182 | None:intergenic | 45.0% | |
AGGCATCAGCAAAGCGATTT+AGG | + | chr8.2:4371423-4371442 | MS.gene58210:intron | 45.0% | |
CGAGTAGAGGAAGAAGAAGA+TGG | - | chr8.2:4371150-4371169 | None:intergenic | 45.0% | |
CTCACTATCGTATCCGCTAA+AGG | + | chr8.2:4371300-4371319 | MS.gene58210:CDS | 45.0% | |
GAGGATAGGATAGAACCTTG+TGG | - | chr8.2:4371341-4371360 | None:intergenic | 45.0% | |
GGCATCAGCAAAGCGATTTA+GGG | + | chr8.2:4371424-4371443 | MS.gene58210:intron | 45.0% | |
GTAGAGGAAGAAGAAGATGG+TGG | - | chr8.2:4371147-4371166 | None:intergenic | 45.0% | |
! | AGATGGTGGTGAAAGTCTCA+AGG | - | chr8.2:4371133-4371152 | None:intergenic | 45.0% |
! | GCAAAGCGATTTAGGGTTAC+CGG | + | chr8.2:4371431-4371450 | MS.gene58210:CDS | 45.0% |
GATACGATAGTGAGAGAGCG+AGG | - | chr8.2:4371294-4371313 | None:intergenic | 50.0% | |
GCGAGGAGAAGTAGTAACCA+TGG | - | chr8.2:4371277-4371296 | None:intergenic | 50.0% | |
GTGCTGGAAAAATCGTGCGT+CGG | + | chr8.2:4371453-4371472 | MS.gene58210:CDS | 50.0% | |
TGAAAGTCTCAAGGCGGCAA+AGG | - | chr8.2:4371124-4371143 | None:intergenic | 50.0% | |
! | ACGCACGATTTTTCCAGCAC+CGG | - | chr8.2:4371453-4371472 | None:intergenic | 50.0% |
! | TGGTGGTGAAAGTCTCAAGG+CGG | - | chr8.2:4371130-4371149 | None:intergenic | 50.0% |
AAAATCGTGCGTCGGAGAGC+AGG | + | chr8.2:4371461-4371480 | MS.gene58210:CDS | 55.0% | |
AAGTCTCAAGGCGGCAAAGG+AGG | - | chr8.2:4371121-4371140 | None:intergenic | 55.0% | |
! | CGATTTAGGGTTACCGGTGC+TGG | + | chr8.2:4371437-4371456 | MS.gene58210:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 4371087 | 4371571 | 4371087 | ID=MS.gene58210 |
chr8.2 | mRNA | 4371087 | 4371571 | 4371087 | ID=MS.gene58210.t1;Parent=MS.gene58210 |
chr8.2 | exon | 4371087 | 4371344 | 4371087 | ID=MS.gene58210.t1.exon1;Parent=MS.gene58210.t1 |
chr8.2 | CDS | 4371087 | 4371344 | 4371087 | ID=cds.MS.gene58210.t1;Parent=MS.gene58210.t1 |
chr8.2 | exon | 4371425 | 4371571 | 4371425 | ID=MS.gene58210.t1.exon2;Parent=MS.gene58210.t1 |
chr8.2 | CDS | 4371425 | 4371571 | 4371425 | ID=cds.MS.gene58210.t1;Parent=MS.gene58210.t1 |
Gene Sequence |
Protein sequence |