Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061819.t1 | KEH28429.1 | 90.1 | 81 | 5 | 1 | 1 | 81 | 1 | 78 | 6.70E-31 | 142.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061819.t1 | A0A072UFB0 | 90.1 | 81 | 5 | 1 | 1 | 81 | 1 | 78 | 4.8e-31 | 142.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene061819 | 0.833621 | 4.80E-56 | -1.69E-46 |
| MS.gene049171 | MS.gene061819 | 0.845549 | 3.79E-59 | -1.69E-46 |
| MS.gene049173 | MS.gene061819 | 0.81033 | 1.22E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene061819 | 0.864471 | 1.19E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene061819 | 0.84343 | 1.41E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene061819 | 0.879278 | 1.42E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene061819 | 0.868427 | 6.58E-66 | -1.69E-46 |
| MS.gene049427 | MS.gene061819 | 0.86562 | 5.17E-65 | -1.69E-46 |
| MS.gene049609 | MS.gene061819 | 0.84522 | 4.65E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene061819 | 0.848979 | 4.34E-60 | -1.69E-46 |
| MS.gene049627 | MS.gene061819 | 0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene061819 | 0.805371 | 1.38E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene061819 | 0.846603 | 1.96E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene061819 | 0.842957 | 1.88E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene061819 | 0.874023 | 9.33E-68 | -1.69E-46 |
| MS.gene050165 | MS.gene061819 | 0.848217 | 7.05E-60 | -1.69E-46 |
| MS.gene050333 | MS.gene061819 | 0.837145 | 6.18E-57 | -1.69E-46 |
| MS.gene050432 | MS.gene061819 | 0.834468 | 2.95E-56 | -1.69E-46 |
| MS.gene050475 | MS.gene061819 | -0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene061819 | 0.841321 | 5.10E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene061819 | 0.849071 | 4.09E-60 | -1.69E-46 |
| MS.gene050538 | MS.gene061819 | 0.825613 | 4.26E-54 | -1.69E-46 |
| MS.gene050541 | MS.gene061819 | -0.808591 | 2.87E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene061819 | 0.802075 | 6.66E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene061819 | 0.842563 | 2.40E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene061819 | 0.847419 | 1.17E-59 | -1.69E-46 |
| MS.gene050675 | MS.gene061819 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene061819 | 0.869162 | 3.81E-66 | -1.69E-46 |
| MS.gene050747 | MS.gene061819 | 0.826568 | 2.53E-54 | -1.69E-46 |
| MS.gene050767 | MS.gene061819 | 0.850423 | 1.71E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene061819 | 0.854467 | 1.21E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene061819 | 0.871712 | 5.54E-67 | -1.69E-46 |
| MS.gene050950 | MS.gene061819 | 0.833011 | 6.81E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene061819 | 0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene061819 | 0.86026 | 2.34E-63 | -1.69E-46 |
| MS.gene05101 | MS.gene061819 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene061819 | 0.820828 | 5.58E-53 | -1.69E-46 |
| MS.gene051228 | MS.gene061819 | 0.819845 | 9.38E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene061819 | 0.842725 | 2.17E-58 | -1.69E-46 |
| MS.gene051434 | MS.gene061819 | 0.816804 | 4.58E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene061819 | 0.825415 | 4.75E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene061819 | 0.847224 | 1.32E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene061819 | 0.809119 | 2.22E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene061819 | 0.825125 | 5.56E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene061819 | 0.873026 | 2.02E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene061819 | 0.86793 | 9.52E-66 | -1.69E-46 |
| MS.gene051877 | MS.gene061819 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene052271 | MS.gene061819 | 0.903136 | 4.74E-79 | -1.69E-46 |
| MS.gene052290 | MS.gene061819 | 0.844172 | 8.91E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene061819 | 0.827226 | 1.76E-54 | -1.69E-46 |
| MS.gene052322 | MS.gene061819 | 0.80874 | 2.67E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene061819 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene061819 | 0.872827 | 2.36E-67 | -1.69E-46 |
| MS.gene052421 | MS.gene061819 | 0.8158 | 7.68E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene061819 | 0.82113 | 4.75E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene061819 | 0.834845 | 2.37E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene061819 | 0.808237 | 3.42E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene061819 | 0.870859 | 1.06E-66 | -1.69E-46 |
| MS.gene052870 | MS.gene061819 | 0.825811 | 3.82E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene061819 | 0.828138 | 1.06E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene061819 | 0.815565 | 8.66E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene061819 | 0.832528 | 8.98E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene061819 | 0.831655 | 1.48E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene061819 | 0.849964 | 2.31E-60 | -1.69E-46 |
| MS.gene053107 | MS.gene061819 | 0.82386 | 1.10E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene061819 | 0.852238 | 5.26E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene061819 | 0.890842 | 6.83E-74 | -1.69E-46 |
| MS.gene053286 | MS.gene061819 | 0.881747 | 1.86E-70 | -1.69E-46 |
| MS.gene053322 | MS.gene061819 | 0.905781 | 2.99E-80 | -1.69E-46 |
| MS.gene053436 | MS.gene061819 | 0.808356 | 3.22E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene061819 | 0.830213 | 3.33E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene061819 | 0.848016 | 8.02E-60 | -1.69E-46 |
| MS.gene053813 | MS.gene061819 | 0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene061819 | 0.807298 | 5.41E-50 | -1.69E-46 |
| MS.gene053915 | MS.gene061819 | 0.830329 | 3.12E-55 | -1.69E-46 |
| MS.gene054376 | MS.gene061819 | 0.846386 | 2.24E-59 | -1.69E-46 |
| MS.gene054408 | MS.gene061819 | 0.822657 | 2.11E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene061819 | 0.814498 | 1.49E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene061819 | 0.853625 | 2.11E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene061819 | 0.885906 | 5.42E-72 | -1.69E-46 |
| MS.gene054802 | MS.gene061819 | 0.869324 | 3.37E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene061819 | 0.86728 | 1.54E-65 | -1.69E-46 |
| MS.gene054804 | MS.gene061819 | 0.869649 | 2.64E-66 | -1.69E-46 |
| MS.gene054954 | MS.gene061819 | 0.832228 | 1.07E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene061819 | 0.831896 | 1.29E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene061819 | -0.808316 | 3.29E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene061819 | 0.873955 | 9.84E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene061819 | 0.81145 | 6.96E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene061819 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene061819 | 0.858081 | 1.05E-62 | -1.69E-46 |
| MS.gene055397 | MS.gene061819 | 0.863086 | 3.20E-64 | -1.69E-46 |
| MS.gene055412 | MS.gene061819 | 0.835692 | 1.45E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene061819 | 0.880705 | 4.40E-70 | -1.69E-46 |
| MS.gene055502 | MS.gene061819 | 0.869972 | 2.07E-66 | -1.69E-46 |
| MS.gene055577 | MS.gene061819 | 0.825889 | 3.66E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene061819 | 0.830669 | 2.58E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene061819 | 0.819997 | 8.65E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene061819 | 0.888024 | 8.52E-73 | -1.69E-46 |
| MS.gene055722 | MS.gene061819 | 0.849347 | 3.43E-60 | -1.69E-46 |
| MS.gene05592 | MS.gene061819 | 0.869192 | 3.72E-66 | -1.69E-46 |
| MS.gene055941 | MS.gene061819 | 0.837564 | 4.82E-57 | -1.69E-46 |
| MS.gene055956 | MS.gene061819 | -0.826194 | 3.10E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene061819 | 0.843109 | 1.72E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene061819 | 0.808111 | 3.64E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene061819 | 0.87975 | 9.66E-70 | -1.69E-46 |
| MS.gene056452 | MS.gene061819 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene061819 | 0.812089 | 5.05E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene061819 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene061819 | 0.878133 | 3.59E-69 | -1.69E-46 |
| MS.gene056692 | MS.gene061819 | 0.81962 | 1.06E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene061819 | 0.806771 | 7.00E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene061819 | 0.80959 | 1.76E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene061819 | 0.881527 | 2.23E-70 | -1.69E-46 |
| MS.gene057076 | MS.gene061819 | 0.818424 | 1.97E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene061819 | 0.811078 | 8.38E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene061819 | 0.888035 | 8.44E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene061819 | 0.854289 | 1.36E-61 | -1.69E-46 |
| MS.gene057196 | MS.gene061819 | 0.836603 | 8.50E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene061819 | 0.85106 | 1.13E-60 | -1.69E-46 |
| MS.gene057332 | MS.gene061819 | 0.801905 | 7.22E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene061819 | 0.891626 | 3.34E-74 | -1.69E-46 |
| MS.gene057658 | MS.gene061819 | 0.809485 | 1.85E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene061819 | 0.819882 | 9.20E-53 | -1.69E-46 |
| MS.gene058006 | MS.gene061819 | 0.810226 | 1.28E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene061819 | 0.854509 | 1.17E-61 | -1.69E-46 |
| MS.gene058130 | MS.gene061819 | 0.818065 | 2.38E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene061819 | 0.809012 | 2.33E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene061819 | 0.818413 | 1.99E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene061819 | 0.847547 | 1.08E-59 | -1.69E-46 |
| MS.gene058338 | MS.gene061819 | 0.822499 | 2.29E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene061819 | 0.826778 | 2.25E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene061819 | 0.888314 | 6.59E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene061819 | 0.858421 | 8.33E-63 | -1.69E-46 |
| MS.gene058660 | MS.gene061819 | 0.844518 | 7.19E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene061819 | 0.833532 | 5.05E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene061819 | 0.838112 | 3.49E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene061819 | 0.804352 | 2.25E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene061819 | 0.847959 | 8.31E-60 | -1.69E-46 |
| MS.gene058840 | MS.gene061819 | -0.805241 | 1.47E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene061819 | 0.844433 | 7.58E-59 | -1.69E-46 |
| MS.gene059023 | MS.gene061819 | 0.843358 | 1.47E-58 | -1.69E-46 |
| MS.gene059029 | MS.gene061819 | 0.859253 | 4.70E-63 | -1.69E-46 |
| MS.gene05934 | MS.gene061819 | 0.842702 | 2.20E-58 | -1.69E-46 |
| MS.gene059536 | MS.gene061819 | 0.871649 | 5.82E-67 | -1.69E-46 |
| MS.gene059676 | MS.gene061819 | 0.801611 | 8.30E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene061819 | 0.869315 | 3.39E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene061819 | 0.815275 | 1.00E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene061819 | 0.805849 | 1.09E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene061819 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene061819 | 0.85926 | 4.68E-63 | -1.69E-46 |
| MS.gene059756 | MS.gene061819 | 0.845504 | 3.90E-59 | -1.69E-46 |
| MS.gene059858 | MS.gene061819 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene061819 | 0.869285 | 3.47E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene061819 | 0.892703 | 1.24E-74 | -1.69E-46 |
| MS.gene060193 | MS.gene061819 | 0.821199 | 4.58E-53 | -1.69E-46 |
| MS.gene060675 | MS.gene061819 | 0.816153 | 6.41E-52 | -1.69E-46 |
| MS.gene060727 | MS.gene061819 | 0.807031 | 6.16E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene061819 | 0.802388 | 5.75E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene061819 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene061819 | 0.830134 | 3.48E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene061819 | 0.862423 | 5.12E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene061819 | 0.826084 | 3.29E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene061819 | 0.804054 | 2.60E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene061819 | 0.863812 | 1.91E-64 | -1.69E-46 |
| MS.gene061041 | MS.gene061819 | 0.824273 | 8.83E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene061819 | 0.834676 | 2.61E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene061819 | 0.873185 | 1.79E-67 | -1.69E-46 |
| MS.gene061171 | MS.gene061819 | 0.801606 | 8.32E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene061819 | 0.893416 | 6.41E-75 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061819.t1 | MTR_5g093240 | 90.123 | 81 | 5 | 1 | 1 | 81 | 1 | 78 | 6.47e-47 | 145 |
| MS.gene061819.t1 | MTR_5g093240 | 90.123 | 81 | 5 | 1 | 1 | 81 | 1 | 78 | 2.68e-46 | 143 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 27 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTCAGTAAGTTCATTA+AGG | 0.284385 | 5.1:-74304003 | MS.gene061819:CDS |
| CGCAGCAGCAACATTATCTA+AGG | 0.361910 | 5.1:-74304090 | MS.gene061819:CDS |
| GCAGCAACAACAATGATATC+TGG | 0.364461 | 5.1:+74303968 | None:intergenic |
| GCACAACACAAAACTACTTT+GGG | 0.366214 | 5.1:-74304062 | MS.gene061819:CDS |
| ATGGATCGGCGGGTTGTGGC+AGG | 0.389363 | 5.1:+74303939 | None:intergenic |
| GAAGCAATGAAGAGGGGAGG+TGG | 0.407582 | 5.1:+74304134 | None:intergenic |
| CTATGTGGCATGGTCTTGCT+TGG | 0.417895 | 5.1:+74304034 | None:intergenic |
| AGCACAACACAAAACTACTT+TGG | 0.452055 | 5.1:-74304063 | MS.gene061819:CDS |
| CAATGATATCTGGAATTGCC+TGG | 0.462076 | 5.1:+74303978 | None:intergenic |
| CTTACTGGGAGAAAAGTAGA+TGG | 0.479013 | 5.1:+74303920 | None:intergenic |
| GTAGATGGATCGGCGGGTTG+TGG | 0.490348 | 5.1:+74303935 | None:intergenic |
| CTTAGATAATGTTGCTGCTG+CGG | 0.540896 | 5.1:+74304091 | None:intergenic |
| TGCATGAGAAGCAATGAAGA+GGG | 0.563172 | 5.1:+74304127 | None:intergenic |
| TGGATCGGCGGGTTGTGGCA+GGG | 0.568272 | 5.1:+74303940 | None:intergenic |
| AGAAAAGTAGATGGATCGGC+GGG | 0.588206 | 5.1:+74303929 | None:intergenic |
| AATGATATCTGGAATTGCCT+GGG | 0.588413 | 5.1:+74303979 | None:intergenic |
| GAAGAAAAGTGCTTACTATG+TGG | 0.588606 | 5.1:+74304019 | None:intergenic |
| TGGGAGAAAAGTAGATGGAT+CGG | 0.598368 | 5.1:+74303925 | None:intergenic |
| GCAGCAACATTATCTAAGGA+TGG | 0.606428 | 5.1:-74304086 | MS.gene061819:CDS |
| AGTAAGTTCATTAAGGACCC+AGG | 0.609846 | 5.1:-74303996 | MS.gene061819:CDS |
| AAAGTGCTTACTATGTGGCA+TGG | 0.619717 | 5.1:+74304024 | None:intergenic |
| GGGGAGGTGGAGACAAGTCA+TGG | 0.642574 | 5.1:+74304147 | None:intergenic |
| ATGCATGAGAAGCAATGAAG+AGG | 0.647708 | 5.1:+74304126 | None:intergenic |
| TGAGAAGCAATGAAGAGGGG+AGG | 0.663602 | 5.1:+74304131 | None:intergenic |
| GAGAAAAGTAGATGGATCGG+CGG | 0.670606 | 5.1:+74303928 | None:intergenic |
| GCATGAGAAGCAATGAAGAG+GGG | 0.705476 | 5.1:+74304128 | None:intergenic |
| CACAACACAAAACTACTTTG+GGG | 0.712340 | 5.1:-74304061 | MS.gene061819:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAGTATTTTTTTTTTACACT+AGG | - | chr5.1:74304137-74304156 | MS.gene061819:CDS | 15.0% |
| ! | GTTCATTATGTCATATTTCA+TGG | - | chr5.1:74304107-74304126 | MS.gene061819:CDS | 25.0% |
| ! | TTTCTTCAGTAAGTTCATTA+AGG | - | chr5.1:74303979-74303998 | MS.gene061819:CDS | 25.0% |
| AGCACAACACAAAACTACTT+TGG | - | chr5.1:74303919-74303938 | MS.gene061819:intron | 35.0% | |
| CACAACACAAAACTACTTTG+GGG | - | chr5.1:74303921-74303940 | MS.gene061819:intron | 35.0% | |
| GCACAACACAAAACTACTTT+GGG | - | chr5.1:74303920-74303939 | MS.gene061819:intron | 35.0% | |
| ! | AATGATATCTGGAATTGCCT+GGG | + | chr5.1:74304006-74304025 | None:intergenic | 35.0% |
| !! | GAAGAAAAGTGCTTACTATG+TGG | + | chr5.1:74303966-74303985 | None:intergenic | 35.0% |
| AGAAAAGAACCGAACCTTAC+TGG | + | chr5.1:74304080-74304099 | None:intergenic | 40.0% | |
| AGTAAGTTCATTAAGGACCC+AGG | - | chr5.1:74303986-74304005 | MS.gene061819:CDS | 40.0% | |
| ATGCATGAGAAGCAATGAAG+AGG | + | chr5.1:74303859-74303878 | None:intergenic | 40.0% | |
| CTTACTGGGAGAAAAGTAGA+TGG | + | chr5.1:74304065-74304084 | None:intergenic | 40.0% | |
| CTTAGATAATGTTGCTGCTG+CGG | + | chr5.1:74303894-74303913 | None:intergenic | 40.0% | |
| GAAAAGAACCGAACCTTACT+GGG | + | chr5.1:74304079-74304098 | None:intergenic | 40.0% | |
| GCAGCAACAACAATGATATC+TGG | + | chr5.1:74304017-74304036 | None:intergenic | 40.0% | |
| GCAGCAACATTATCTAAGGA+TGG | - | chr5.1:74303896-74303915 | MS.gene061819:intron | 40.0% | |
| TGCATGAGAAGCAATGAAGA+GGG | + | chr5.1:74303858-74303877 | None:intergenic | 40.0% | |
| TGGGAGAAAAGTAGATGGAT+CGG | + | chr5.1:74304060-74304079 | None:intergenic | 40.0% | |
| ! | AAAGTGCTTACTATGTGGCA+TGG | + | chr5.1:74303961-74303980 | None:intergenic | 40.0% |
| ! | ACTTTTCTCCCAGTAAGGTT+CGG | - | chr5.1:74304068-74304087 | MS.gene061819:CDS | 40.0% |
| ! | CAATGATATCTGGAATTGCC+TGG | + | chr5.1:74304007-74304026 | None:intergenic | 40.0% |
| !! | CATCTACTTTTCTCCCAGTA+AGG | - | chr5.1:74304063-74304082 | MS.gene061819:CDS | 40.0% |
| AGAAAAGTAGATGGATCGGC+GGG | + | chr5.1:74304056-74304075 | None:intergenic | 45.0% | |
| CGCAGCAGCAACATTATCTA+AGG | - | chr5.1:74303892-74303911 | MS.gene061819:intron | 45.0% | |
| GAGAAAAGTAGATGGATCGG+CGG | + | chr5.1:74304057-74304076 | None:intergenic | 45.0% | |
| GCATGAGAAGCAATGAAGAG+GGG | + | chr5.1:74303857-74303876 | None:intergenic | 45.0% | |
| TGAGAAGCAATGAAGAGGGG+AGG | + | chr5.1:74303854-74303873 | None:intergenic | 50.0% | |
| ! | CTATGTGGCATGGTCTTGCT+TGG | + | chr5.1:74303951-74303970 | None:intergenic | 50.0% |
| GAAGCAATGAAGAGGGGAGG+TGG | + | chr5.1:74303851-74303870 | None:intergenic | 55.0% | |
| !! | GTAGATGGATCGGCGGGTTG+TGG | + | chr5.1:74304050-74304069 | None:intergenic | 60.0% |
| !! | ATGGATCGGCGGGTTGTGGC+AGG | + | chr5.1:74304046-74304065 | None:intergenic | 65.0% |
| !! | TGGATCGGCGGGTTGTGGCA+GGG | + | chr5.1:74304045-74304064 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 74303837 | 74304167 | 74303837 | ID=MS.gene061819 |
| chr5.1 | mRNA | 74303837 | 74304167 | 74303837 | ID=MS.gene061819.t1;Parent=MS.gene061819 |
| chr5.1 | exon | 74303925 | 74304167 | 74303925 | ID=MS.gene061819.t1.exon1;Parent=MS.gene061819.t1 |
| chr5.1 | CDS | 74303925 | 74304167 | 74303925 | ID=cds.MS.gene061819.t1;Parent=MS.gene061819.t1 |
| chr5.1 | exon | 74303837 | 74303845 | 74303837 | ID=MS.gene061819.t1.exon2;Parent=MS.gene061819.t1 |
| chr5.1 | CDS | 74303837 | 74303845 | 74303837 | ID=cds.MS.gene061819.t1;Parent=MS.gene061819.t1 |
| Gene Sequence |
| Protein sequence |
