Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96775.t1 | XP_013456761.1 | 97.8 | 490 | 11 | 0 | 1 | 490 | 1 | 490 | 1.40E-277 | 964.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96775.t1 | Q43088 | 88.8 | 490 | 54 | 1 | 1 | 490 | 1 | 489 | 2.2e-255 | 882.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96775.t1 | A0A072UM69 | 97.8 | 490 | 11 | 0 | 1 | 490 | 1 | 490 | 1.0e-277 | 964.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene96775.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene96775 | 0.877032 | 8.70E-69 | -1.69E-46 |
MS.gene049171 | MS.gene96775 | 0.890669 | 7.99E-74 | -1.69E-46 |
MS.gene049173 | MS.gene96775 | 0.849656 | 2.81E-60 | -1.69E-46 |
MS.gene049217 | MS.gene96775 | 0.837654 | 4.57E-57 | -1.69E-46 |
MS.gene049222 | MS.gene96775 | 0.875528 | 2.87E-68 | -1.69E-46 |
MS.gene049285 | MS.gene96775 | 0.890069 | 1.37E-73 | -1.69E-46 |
MS.gene049320 | MS.gene96775 | 0.852804 | 3.63E-61 | -1.69E-46 |
MS.gene049427 | MS.gene96775 | 0.875042 | 4.21E-68 | -1.69E-46 |
MS.gene049609 | MS.gene96775 | 0.869412 | 3.16E-66 | -1.69E-46 |
MS.gene049614 | MS.gene96775 | 0.820258 | 7.54E-53 | -1.69E-46 |
MS.gene049615 | MS.gene96775 | 0.800782 | 1.23E-48 | -1.69E-46 |
MS.gene049627 | MS.gene96775 | 0.840073 | 1.08E-57 | -1.69E-46 |
MS.gene049633 | MS.gene96775 | 0.837339 | 5.51E-57 | -1.69E-46 |
MS.gene049805 | MS.gene96775 | 0.893381 | 6.63E-75 | -1.69E-46 |
MS.gene05010 | MS.gene96775 | 0.809589 | 1.76E-50 | -1.69E-46 |
MS.gene050163 | MS.gene96775 | 0.883495 | 4.27E-71 | -1.69E-46 |
MS.gene050165 | MS.gene96775 | 0.856189 | 3.81E-62 | -1.69E-46 |
MS.gene050333 | MS.gene96775 | 0.858646 | 7.14E-63 | -1.69E-46 |
MS.gene050444 | MS.gene96775 | 0.815733 | 7.95E-52 | -1.69E-46 |
MS.gene050504 | MS.gene96775 | 0.865127 | 7.40E-65 | -1.69E-46 |
MS.gene050507 | MS.gene96775 | 0.811175 | 7.99E-51 | -1.69E-46 |
MS.gene050518 | MS.gene96775 | 0.840722 | 7.33E-58 | -1.69E-46 |
MS.gene050538 | MS.gene96775 | 0.821635 | 3.64E-53 | -1.69E-46 |
MS.gene050547 | MS.gene96775 | -0.800032 | 1.74E-48 | -1.69E-46 |
MS.gene050577 | MS.gene96775 | 0.858699 | 6.89E-63 | -1.69E-46 |
MS.gene050593 | MS.gene96775 | 0.865155 | 7.25E-65 | -1.69E-46 |
MS.gene050612 | MS.gene96775 | 0.839266 | 1.76E-57 | -1.69E-46 |
MS.gene050670 | MS.gene96775 | 0.815468 | 9.10E-52 | -1.69E-46 |
MS.gene050675 | MS.gene96775 | 0.821209 | 4.56E-53 | -1.69E-46 |
MS.gene050699 | MS.gene96775 | 0.854042 | 1.60E-61 | -1.69E-46 |
MS.gene050747 | MS.gene96775 | 0.895915 | 6.09E-76 | -1.69E-46 |
MS.gene050767 | MS.gene96775 | 0.822991 | 1.76E-53 | -1.69E-46 |
MS.gene050770 | MS.gene96775 | 0.825525 | 4.47E-54 | -1.69E-46 |
MS.gene050772 | MS.gene96775 | 0.872496 | 3.04E-67 | -1.69E-46 |
MS.gene050781 | MS.gene96775 | 0.852399 | 4.74E-61 | -1.69E-46 |
MS.gene050783 | MS.gene96775 | 0.827803 | 1.28E-54 | -1.69E-46 |
MS.gene05080 | MS.gene96775 | 0.826656 | 2.41E-54 | -1.69E-46 |
MS.gene050812 | MS.gene96775 | 0.84229 | 2.83E-58 | -1.69E-46 |
MS.gene05081 | MS.gene96775 | 0.822412 | 2.40E-53 | -1.69E-46 |
MS.gene050868 | MS.gene96775 | 0.809508 | 1.83E-50 | -1.69E-46 |
MS.gene050871 | MS.gene96775 | 0.807376 | 5.21E-50 | -1.69E-46 |
MS.gene050950 | MS.gene96775 | 0.891674 | 3.20E-74 | -1.69E-46 |
MS.gene050986 | MS.gene96775 | 0.827303 | 1.69E-54 | -1.69E-46 |
MS.gene05100 | MS.gene96775 | 0.876993 | 8.98E-69 | -1.69E-46 |
MS.gene05101 | MS.gene96775 | 0.808641 | 2.80E-50 | -1.69E-46 |
MS.gene05105 | MS.gene96775 | 0.826958 | 2.04E-54 | -1.69E-46 |
MS.gene051228 | MS.gene96775 | 0.821566 | 3.77E-53 | -1.69E-46 |
MS.gene051387 | MS.gene96775 | 0.844384 | 7.82E-59 | -1.69E-46 |
MS.gene051551 | MS.gene96775 | 0.81947 | 1.14E-52 | -1.69E-46 |
MS.gene051666 | MS.gene96775 | 0.888981 | 3.64E-73 | -1.69E-46 |
MS.gene051692 | MS.gene96775 | 0.824475 | 7.91E-54 | -1.69E-46 |
MS.gene051694 | MS.gene96775 | 0.86897 | 4.39E-66 | -1.69E-46 |
MS.gene051810 | MS.gene96775 | 0.821675 | 3.56E-53 | -1.69E-46 |
MS.gene051838 | MS.gene96775 | 0.829035 | 6.45E-55 | -1.69E-46 |
MS.gene051858 | MS.gene96775 | 0.849009 | 4.26E-60 | -1.69E-46 |
MS.gene051949 | MS.gene96775 | 0.817282 | 3.58E-52 | -1.69E-46 |
MS.gene052164 | MS.gene96775 | 0.830952 | 2.20E-55 | -1.69E-46 |
MS.gene052271 | MS.gene96775 | 0.843835 | 1.10E-58 | -1.69E-46 |
MS.gene052290 | MS.gene96775 | 0.80204 | 6.77E-49 | -1.69E-46 |
MS.gene052310 | MS.gene96775 | 0.830643 | 2.62E-55 | -1.69E-46 |
MS.gene052322 | MS.gene96775 | 0.831211 | 1.90E-55 | -1.69E-46 |
MS.gene052379 | MS.gene96775 | 0.859072 | 5.33E-63 | -1.69E-46 |
MS.gene052421 | MS.gene96775 | 0.865506 | 5.62E-65 | -1.69E-46 |
MS.gene052481 | MS.gene96775 | 0.839818 | 1.26E-57 | -1.69E-46 |
MS.gene052482 | MS.gene96775 | 0.802763 | 4.81E-49 | -1.69E-46 |
MS.gene052484 | MS.gene96775 | 0.839868 | 1.23E-57 | -1.69E-46 |
MS.gene052486 | MS.gene96775 | 0.810694 | 1.01E-50 | -1.69E-46 |
MS.gene052501 | MS.gene96775 | 0.860023 | 2.76E-63 | -1.69E-46 |
MS.gene052503 | MS.gene96775 | 0.863186 | 2.98E-64 | -1.69E-46 |
MS.gene052505 | MS.gene96775 | 0.847696 | 9.82E-60 | -1.69E-46 |
MS.gene052506 | MS.gene96775 | 0.811677 | 6.21E-51 | -1.69E-46 |
MS.gene052615 | MS.gene96775 | 0.862355 | 5.38E-64 | -1.69E-46 |
MS.gene052822 | MS.gene96775 | 0.812597 | 3.91E-51 | -1.69E-46 |
MS.gene052823 | MS.gene96775 | 0.85355 | 2.22E-61 | -1.69E-46 |
MS.gene052825 | MS.gene96775 | 0.852706 | 3.87E-61 | -1.69E-46 |
MS.gene052870 | MS.gene96775 | 0.841704 | 4.04E-58 | -1.69E-46 |
MS.gene052872 | MS.gene96775 | 0.850188 | 2.00E-60 | -1.69E-46 |
MS.gene052916 | MS.gene96775 | 0.815343 | 9.70E-52 | -1.69E-46 |
MS.gene052966 | MS.gene96775 | 0.804259 | 2.35E-49 | -1.69E-46 |
MS.gene052982 | MS.gene96775 | 0.843703 | 1.19E-58 | -1.69E-46 |
MS.gene053103 | MS.gene96775 | 0.857146 | 1.99E-62 | -1.69E-46 |
MS.gene053104 | MS.gene96775 | 0.853092 | 3.00E-61 | -1.69E-46 |
MS.gene053107 | MS.gene96775 | 0.845661 | 3.53E-59 | -1.69E-46 |
MS.gene053203 | MS.gene96775 | 0.845596 | 3.68E-59 | -1.69E-46 |
MS.gene053207 | MS.gene96775 | 0.862642 | 4.38E-64 | -1.69E-46 |
MS.gene053213 | MS.gene96775 | 0.887071 | 1.97E-72 | -1.69E-46 |
MS.gene053284 | MS.gene96775 | 0.811976 | 5.35E-51 | -1.69E-46 |
MS.gene053285 | MS.gene96775 | 0.819602 | 1.07E-52 | -1.69E-46 |
MS.gene053286 | MS.gene96775 | 0.878962 | 1.84E-69 | -1.69E-46 |
MS.gene053322 | MS.gene96775 | 0.889766 | 1.80E-73 | -1.69E-46 |
MS.gene053436 | MS.gene96775 | 0.84025 | 9.73E-58 | -1.69E-46 |
MS.gene053479 | MS.gene96775 | 0.800311 | 1.53E-48 | -1.69E-46 |
MS.gene053480 | MS.gene96775 | 0.812803 | 3.53E-51 | -1.69E-46 |
MS.gene053574 | MS.gene96775 | 0.847257 | 1.30E-59 | -1.69E-46 |
MS.gene053579 | MS.gene96775 | 0.848979 | 4.34E-60 | -1.69E-46 |
MS.gene053626 | MS.gene96775 | 0.807319 | 5.36E-50 | -1.69E-46 |
MS.gene053632 | MS.gene96775 | 0.867369 | 1.44E-65 | -1.69E-46 |
MS.gene053824 | MS.gene96775 | 0.858219 | 9.57E-63 | -1.69E-46 |
MS.gene053916 | MS.gene96775 | 0.829267 | 5.67E-55 | -1.69E-46 |
MS.gene054376 | MS.gene96775 | 0.808853 | 2.52E-50 | -1.69E-46 |
MS.gene054408 | MS.gene96775 | 0.872839 | 2.34E-67 | -1.69E-46 |
MS.gene054595 | MS.gene96775 | 0.838858 | 2.24E-57 | -1.69E-46 |
MS.gene054600 | MS.gene96775 | 0.861786 | 8.03E-64 | -1.69E-46 |
MS.gene054642 | MS.gene96775 | 0.874714 | 5.44E-68 | -1.69E-46 |
MS.gene05470 | MS.gene96775 | 0.843549 | 1.31E-58 | -1.69E-46 |
MS.gene054802 | MS.gene96775 | 0.836588 | 8.57E-57 | -1.69E-46 |
MS.gene054803 | MS.gene96775 | 0.834541 | 2.82E-56 | -1.69E-46 |
MS.gene054804 | MS.gene96775 | 0.837706 | 4.44E-57 | -1.69E-46 |
MS.gene054884 | MS.gene96775 | -0.810865 | 9.32E-51 | -1.69E-46 |
MS.gene054927 | MS.gene96775 | 0.834714 | 2.55E-56 | -1.69E-46 |
MS.gene054954 | MS.gene96775 | 0.841952 | 3.48E-58 | -1.69E-46 |
MS.gene05505 | MS.gene96775 | 0.859333 | 4.45E-63 | -1.69E-46 |
MS.gene055206 | MS.gene96775 | 0.865914 | 4.18E-65 | -1.69E-46 |
MS.gene055212 | MS.gene96775 | 0.826255 | 3.00E-54 | -1.69E-46 |
MS.gene055224 | MS.gene96775 | 0.838336 | 3.06E-57 | -1.69E-46 |
MS.gene055289 | MS.gene96775 | 0.852632 | 4.06E-61 | -1.69E-46 |
MS.gene055362 | MS.gene96775 | 0.868479 | 6.33E-66 | -1.69E-46 |
MS.gene055397 | MS.gene96775 | 0.831012 | 2.12E-55 | -1.69E-46 |
MS.gene055412 | MS.gene96775 | 0.851788 | 7.06E-61 | -1.69E-46 |
MS.gene055499 | MS.gene96775 | 0.847496 | 1.11E-59 | -1.69E-46 |
MS.gene055502 | MS.gene96775 | 0.878501 | 2.67E-69 | -1.69E-46 |
MS.gene055577 | MS.gene96775 | 0.859235 | 4.76E-63 | -1.69E-46 |
MS.gene055647 | MS.gene96775 | 0.841455 | 4.70E-58 | -1.69E-46 |
MS.gene055722 | MS.gene96775 | 0.853734 | 1.96E-61 | -1.69E-46 |
MS.gene055748 | MS.gene96775 | 0.845841 | 3.16E-59 | -1.69E-46 |
MS.gene055750 | MS.gene96775 | 0.825767 | 3.92E-54 | -1.69E-46 |
MS.gene055751 | MS.gene96775 | 0.828674 | 7.89E-55 | -1.69E-46 |
MS.gene05589 | MS.gene96775 | 0.817154 | 3.82E-52 | -1.69E-46 |
MS.gene05592 | MS.gene96775 | 0.825614 | 4.26E-54 | -1.69E-46 |
MS.gene055941 | MS.gene96775 | 0.870442 | 1.46E-66 | -1.69E-46 |
MS.gene055956 | MS.gene96775 | -0.816768 | 4.67E-52 | -1.69E-46 |
MS.gene056083 | MS.gene96775 | 0.861349 | 1.09E-63 | -1.69E-46 |
MS.gene056374 | MS.gene96775 | 0.859743 | 3.35E-63 | -1.69E-46 |
MS.gene056409 | MS.gene96775 | 0.838966 | 2.10E-57 | -1.69E-46 |
MS.gene056449 | MS.gene96775 | 0.81127 | 7.62E-51 | -1.69E-46 |
MS.gene056504 | MS.gene96775 | 0.827206 | 1.78E-54 | -1.69E-46 |
MS.gene056510 | MS.gene96775 | 0.830378 | 3.04E-55 | -1.69E-46 |
MS.gene056549 | MS.gene96775 | 0.830362 | 3.06E-55 | -1.69E-46 |
MS.gene056610 | MS.gene96775 | 0.859194 | 4.90E-63 | -1.69E-46 |
MS.gene056657 | MS.gene96775 | 0.857796 | 1.28E-62 | -1.69E-46 |
MS.gene056692 | MS.gene96775 | 0.860834 | 1.57E-63 | -1.69E-46 |
MS.gene056796 | MS.gene96775 | 0.811021 | 8.62E-51 | -1.69E-46 |
MS.gene056877 | MS.gene96775 | 0.800032 | 1.74E-48 | -1.69E-46 |
MS.gene056897 | MS.gene96775 | 0.864009 | 1.65E-64 | -1.69E-46 |
MS.gene056946 | MS.gene96775 | 0.802923 | 4.46E-49 | -1.69E-46 |
MS.gene057011 | MS.gene96775 | 0.883897 | 3.04E-71 | -1.69E-46 |
MS.gene057048 | MS.gene96775 | 0.816699 | 4.83E-52 | -1.69E-46 |
MS.gene057076 | MS.gene96775 | 0.802979 | 4.34E-49 | -1.69E-46 |
MS.gene057123 | MS.gene96775 | 0.814001 | 1.92E-51 | -1.69E-46 |
MS.gene057129 | MS.gene96775 | 0.877269 | 7.20E-69 | -1.69E-46 |
MS.gene057146 | MS.gene96775 | 0.853183 | 2.83E-61 | -1.69E-46 |
MS.gene057196 | MS.gene96775 | 0.847554 | 1.07E-59 | -1.69E-46 |
MS.gene057331 | MS.gene96775 | 0.835035 | 2.12E-56 | -1.69E-46 |
MS.gene057332 | MS.gene96775 | 0.817692 | 2.89E-52 | -1.69E-46 |
MS.gene057416 | MS.gene96775 | 0.902219 | 1.21E-78 | -1.69E-46 |
MS.gene057658 | MS.gene96775 | 0.886495 | 3.25E-72 | -1.69E-46 |
MS.gene057831 | MS.gene96775 | 0.85794 | 1.16E-62 | -1.69E-46 |
MS.gene057856 | MS.gene96775 | 0.828858 | 7.12E-55 | -1.69E-46 |
MS.gene058006 | MS.gene96775 | 0.80852 | 2.97E-50 | -1.69E-46 |
MS.gene058019 | MS.gene96775 | 0.87395 | 9.88E-68 | -1.69E-46 |
MS.gene058130 | MS.gene96775 | 0.804108 | 2.53E-49 | -1.69E-46 |
MS.gene058233 | MS.gene96775 | 0.821358 | 4.21E-53 | -1.69E-46 |
MS.gene058293 | MS.gene96775 | 0.843466 | 1.38E-58 | -1.69E-46 |
MS.gene058323 | MS.gene96775 | 0.859845 | 3.12E-63 | -1.69E-46 |
MS.gene058338 | MS.gene96775 | 0.844096 | 9.34E-59 | -1.69E-46 |
MS.gene058376 | MS.gene96775 | 0.802338 | 5.88E-49 | -1.69E-46 |
MS.gene05837 | MS.gene96775 | 0.839539 | 1.49E-57 | -1.69E-46 |
MS.gene058419 | MS.gene96775 | 0.891359 | 4.27E-74 | -1.69E-46 |
MS.gene058444 | MS.gene96775 | 0.835957 | 1.24E-56 | -1.69E-46 |
MS.gene058544 | MS.gene96775 | 0.893189 | 7.92E-75 | -1.69E-46 |
MS.gene058660 | MS.gene96775 | 0.815003 | 1.15E-51 | -1.69E-46 |
MS.gene058700 | MS.gene96775 | 0.808763 | 2.64E-50 | -1.69E-46 |
MS.gene058773 | MS.gene96775 | 0.845797 | 3.25E-59 | -1.69E-46 |
MS.gene058838 | MS.gene96775 | 0.891081 | 5.50E-74 | -1.69E-46 |
MS.gene05883 | MS.gene96775 | 0.849295 | 3.55E-60 | -1.69E-46 |
MS.gene059022 | MS.gene96775 | 0.853554 | 2.21E-61 | -1.69E-46 |
MS.gene059023 | MS.gene96775 | 0.87966 | 1.04E-69 | -1.69E-46 |
MS.gene059029 | MS.gene96775 | 0.822426 | 2.38E-53 | -1.69E-46 |
MS.gene05913 | MS.gene96775 | 0.81082 | 9.53E-51 | -1.69E-46 |
MS.gene05914 | MS.gene96775 | 0.844778 | 6.12E-59 | -1.69E-46 |
MS.gene05934 | MS.gene96775 | 0.880537 | 5.06E-70 | -1.69E-46 |
MS.gene059455 | MS.gene96775 | 0.801488 | 8.79E-49 | -1.69E-46 |
MS.gene059536 | MS.gene96775 | 0.888261 | 6.91E-73 | -1.69E-46 |
MS.gene059676 | MS.gene96775 | 0.809472 | 1.86E-50 | -1.69E-46 |
MS.gene059677 | MS.gene96775 | 0.875449 | 3.06E-68 | -1.69E-46 |
MS.gene059688 | MS.gene96775 | 0.817204 | 3.72E-52 | -1.69E-46 |
MS.gene059692 | MS.gene96775 | 0.805567 | 1.25E-49 | -1.69E-46 |
MS.gene059695 | MS.gene96775 | 0.812462 | 4.19E-51 | -1.69E-46 |
MS.gene059718 | MS.gene96775 | 0.885444 | 8.09E-72 | -1.69E-46 |
MS.gene059756 | MS.gene96775 | 0.87311 | 1.90E-67 | -1.69E-46 |
MS.gene059801 | MS.gene96775 | 0.859651 | 3.57E-63 | -1.69E-46 |
MS.gene059865 | MS.gene96775 | 0.801086 | 1.06E-48 | -1.69E-46 |
MS.gene059902 | MS.gene96775 | 0.847374 | 1.20E-59 | -1.69E-46 |
MS.gene059960 | MS.gene96775 | 0.881393 | 2.49E-70 | -1.69E-46 |
MS.gene060193 | MS.gene96775 | 0.833811 | 4.30E-56 | -1.69E-46 |
MS.gene060403 | MS.gene96775 | 0.807707 | 4.43E-50 | -1.69E-46 |
MS.gene060675 | MS.gene96775 | 0.80112 | 1.05E-48 | -1.69E-46 |
MS.gene060703 | MS.gene96775 | 0.808875 | 2.50E-50 | -1.69E-46 |
MS.gene060762 | MS.gene96775 | 0.865282 | 6.61E-65 | -1.69E-46 |
MS.gene06077 | MS.gene96775 | 0.86871 | 5.33E-66 | -1.69E-46 |
MS.gene060804 | MS.gene96775 | 0.839916 | 1.19E-57 | -1.69E-46 |
MS.gene060835 | MS.gene96775 | 0.833038 | 6.71E-56 | -1.69E-46 |
MS.gene060837 | MS.gene96775 | 0.803492 | 3.40E-49 | -1.69E-46 |
MS.gene06092 | MS.gene96775 | 0.8982 | 6.70E-77 | -1.69E-46 |
MS.gene060982 | MS.gene96775 | 0.81062 | 1.05E-50 | -1.69E-46 |
MS.gene061041 | MS.gene96775 | 0.818198 | 2.22E-52 | -1.69E-46 |
MS.gene061150 | MS.gene96775 | 0.926904 | 2.47E-91 | -1.69E-46 |
MS.gene061200 | MS.gene96775 | 0.879791 | 9.34E-70 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96775.t1 | MTR_4g082305 | 97.755 | 490 | 11 | 0 | 1 | 490 | 1 | 490 | 0.0 | 988 |
MS.gene96775.t1 | MTR_4g082305 | 97.535 | 284 | 7 | 0 | 1 | 284 | 1 | 284 | 0.0 | 572 |
MS.gene96775.t1 | MTR_3g082690 | 26.797 | 459 | 291 | 20 | 37 | 473 | 43 | 478 | 3.36e-25 | 108 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.30e-17 | 84.7 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.37e-17 | 84.7 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.62e-17 | 85.1 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.68e-17 | 84.7 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 1.87e-17 | 85.1 |
MS.gene96775.t1 | MTR_1g115980 | 27.891 | 294 | 175 | 10 | 54 | 334 | 33 | 302 | 2.21e-17 | 84.7 |
MS.gene96775.t1 | MTR_7g076590 | 29.412 | 323 | 150 | 13 | 55 | 311 | 8 | 318 | 4.90e-15 | 77.8 |
MS.gene96775.t1 | MTR_1g077040 | 30.052 | 193 | 121 | 6 | 60 | 244 | 11 | 197 | 7.10e-13 | 71.2 |
MS.gene96775.t1 | MTR_6g023320 | 24.171 | 422 | 261 | 17 | 61 | 446 | 73 | 471 | 3.62e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene96775.t1 | AT1G14030 | 64.069 | 462 | 157 | 3 | 23 | 483 | 24 | 477 | 0.0 | 609 |
MS.gene96775.t1 | AT3G07670 | 29.618 | 314 | 197 | 13 | 44 | 346 | 63 | 363 | 1.19e-22 | 101 |
MS.gene96775.t1 | AT4G20130 | 25.814 | 430 | 234 | 17 | 80 | 470 | 99 | 482 | 5.53e-18 | 87.0 |
MS.gene96775.t1 | AT3G07670 | 31.441 | 229 | 137 | 10 | 126 | 346 | 9 | 225 | 1.04e-17 | 85.1 |
MS.gene96775.t1 | AT3G55080 | 25.070 | 355 | 228 | 12 | 4 | 349 | 2 | 327 | 6.49e-17 | 83.6 |
MS.gene96775.t1 | AT4G20130 | 25.779 | 353 | 195 | 12 | 139 | 470 | 57 | 363 | 5.64e-15 | 77.0 |
MS.gene96775.t1 | AT4G20130 | 25.779 | 353 | 195 | 12 | 139 | 470 | 57 | 363 | 5.64e-15 | 77.0 |
MS.gene96775.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.54e-12 | 69.3 |
MS.gene96775.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.54e-12 | 69.3 |
MS.gene96775.t1 | AT5G14260 | 25.575 | 391 | 239 | 15 | 85 | 445 | 115 | 483 | 2.54e-12 | 69.3 |
MS.gene96775.t1 | AT3G55080 | 24.615 | 260 | 172 | 9 | 97 | 349 | 1 | 243 | 3.58e-12 | 68.6 |
MS.gene96775.t1 | AT3G55080 | 24.615 | 260 | 172 | 9 | 97 | 349 | 1 | 243 | 3.58e-12 | 68.6 |
MS.gene96775.t1 | AT3G55080 | 26.009 | 223 | 148 | 8 | 133 | 349 | 6 | 217 | 1.03e-11 | 66.6 |
MS.gene96775.t1 | AT3G55080 | 24.664 | 223 | 146 | 7 | 133 | 349 | 6 | 212 | 1.85e-11 | 65.9 |
Find 111 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACACTGGATGACTTCTTC+TGG | 0.230073 | 4.3:-28128717 | MS.gene96775:CDS |
GGGTACCGATGCTTTCTTAT+TGG | 0.244903 | 4.3:-28127458 | MS.gene96775:CDS |
ACTACTAACCTTGAAGTTCT+TGG | 0.282877 | 4.3:+28128974 | None:intergenic |
GATGACTTCTTCTGGGCATT+TGG | 0.290567 | 4.3:-28128709 | MS.gene96775:CDS |
CTCCAGCAGTTCAAACCTTC+TGG | 0.294167 | 4.3:-28129422 | MS.gene96775:CDS |
ACCAGCAAGGGCGGATTTGC+AGG | 0.304466 | 4.3:+28127345 | None:intergenic |
GGATTTATCCACAACCTCTT+AGG | 0.337946 | 4.3:+28129276 | None:intergenic |
TTCCAGAAGGTTTGAACTGC+TGG | 0.346946 | 4.3:+28129420 | None:intergenic |
CAGATGAAGAGTTGGTCCTT+TGG | 0.353677 | 4.3:+28129500 | None:intergenic |
GCCTGCAAATCCGCCCTTGC+TGG | 0.360260 | 4.3:-28127346 | MS.gene96775:CDS |
GCAGAGTTAGCTCTGGACTA+TGG | 0.370613 | 4.3:-28127673 | MS.gene96775:CDS |
CACTGTTCAGAGACTCCATC+TGG | 0.373117 | 4.3:-28127432 | MS.gene96775:CDS |
AAACTGATTCTACTATATAT+TGG | 0.380508 | 4.3:-28129116 | MS.gene96775:intron |
GATCTTCGAGCAGAAAGAAT+TGG | 0.388839 | 4.3:-28126964 | MS.gene96775:CDS |
TTCTGTCAAGGCAGGAGAAC+AGG | 0.398267 | 4.3:-28128065 | MS.gene96775:intron |
GCAACCAATCCTAAACCTTC+TGG | 0.402948 | 4.3:+28129339 | None:intergenic |
CTCAAGGATCTTGGACTTTG+CGG | 0.406199 | 4.3:-28126906 | MS.gene96775:CDS |
GAAAGGAGGCTCAAGGATCT+TGG | 0.407166 | 4.3:-28126915 | MS.gene96775:CDS |
GAAGAATGAATGTCTGAAAC+TGG | 0.408078 | 4.3:-28128785 | MS.gene96775:CDS |
TATGCATATCGATCTGCATT+TGG | 0.408825 | 4.3:+28127640 | None:intergenic |
GCTGTTGCTGCTTCAGAGAT+AGG | 0.410978 | 4.3:-28129249 | MS.gene96775:CDS |
TTCTCCTGCCTTGACAGAAA+GGG | 0.411526 | 4.3:+28128069 | None:intergenic |
GCTACTGATTTGACAGAGAA+AGG | 0.414228 | 4.3:+28129471 | None:intergenic |
GACACTGGATGACTTCTTCT+GGG | 0.421868 | 4.3:-28128716 | MS.gene96775:CDS |
ACTAGCTTTCACTGGTGTCT+TGG | 0.428693 | 4.3:+28129368 | None:intergenic |
AGTGCTACTAATCTCAGATA+TGG | 0.428804 | 4.3:+28127484 | None:intergenic |
TCTGAAGCAGCAACAGCATC+AGG | 0.439199 | 4.3:+28129255 | None:intergenic |
TTTCTTGATAATATTCCAAC+TGG | 0.444121 | 4.3:+28126934 | None:intergenic |
TGTGATTCCACTTGCAGACT+TGG | 0.445510 | 4.3:-28128638 | MS.gene96775:intron |
TGTTGTTTCTTATTAGAGAA+AGG | 0.454728 | 4.3:-28129188 | MS.gene96775:CDS |
CAGTTCAAACCTTCTGGAAG+TGG | 0.454992 | 4.3:-28129416 | MS.gene96775:CDS |
GGTCAAGAGAGGATTCTGTT+TGG | 0.455743 | 4.3:-28129167 | MS.gene96775:CDS |
ATAGTTTATTACCTGTTCAA+TGG | 0.458942 | 4.3:+28127312 | None:intergenic |
TGCAGGTGCCTAAGAGGTTG+TGG | 0.460079 | 4.3:-28129284 | MS.gene96775:CDS |
CATTTGGAATTCTCAGATCA+AGG | 0.465096 | 4.3:-28128693 | MS.gene96775:CDS |
GTTCTCCTGCCTTGACAGAA+AGG | 0.468467 | 4.3:+28128068 | None:intergenic |
AGATATGGAAGCATCCCTTC+TGG | 0.477120 | 4.3:+28127499 | None:intergenic |
CTCCTCATTATCACGGCTCA+TGG | 0.477204 | 4.3:+28127393 | None:intergenic |
CTCCATCTGGGGTCATCTTG+AGG | 0.481584 | 4.3:-28127419 | MS.gene96775:CDS |
AAGAGGCAAATCTAGATTCA+AGG | 0.484970 | 4.3:-28127046 | MS.gene96775:CDS |
AAGAAGTCATCCAGTGTCAC+AGG | 0.486528 | 4.3:+28128721 | None:intergenic |
GAAGAGCTCCAAGAACTTCA+AGG | 0.489004 | 4.3:-28128982 | MS.gene96775:intron |
GGTACCACACTAGCTTTCAC+TGG | 0.496675 | 4.3:+28129360 | None:intergenic |
TCTGTTTGGAAGCATTACTT+TGG | 0.496732 | 4.3:-28129153 | MS.gene96775:CDS |
GGGATTACCTATTTGCCCTA+AGG | 0.498091 | 4.3:-28128096 | MS.gene96775:CDS |
TTATCACACAACCATTGAAC+AGG | 0.500689 | 4.3:-28127323 | MS.gene96775:intron |
AAGCAATGCAGAGTTAGCTC+TGG | 0.510627 | 4.3:-28127680 | MS.gene96775:CDS |
AGTGTGGTACCAGAAGGTTT+AGG | 0.510846 | 4.3:-28129348 | MS.gene96775:CDS |
TATGCATACACCTTGACACT+GGG | 0.512341 | 4.3:-28127625 | MS.gene96775:CDS |
TTACTTTGGTATTCTGCCAC+AGG | 0.513694 | 4.3:-28129139 | MS.gene96775:CDS |
TCATCCAGTGTCACAGGAGA+AGG | 0.518798 | 4.3:+28128727 | None:intergenic |
CTGTTGCTGCTTCAGAGATA+GGG | 0.524576 | 4.3:-28129248 | MS.gene96775:CDS |
GGAAGCATCCCTTCTGGAAG+AGG | 0.525978 | 4.3:+28127505 | None:intergenic |
GCCCATGAGCCGTGATAATG+AGG | 0.527832 | 4.3:-28127395 | MS.gene96775:CDS |
TGGAAGTGGCTTCAAGAAGA+AGG | 0.530981 | 4.3:-28129402 | MS.gene96775:CDS |
ATCTGAGATTAGTAGCACTA+GGG | 0.531413 | 4.3:-28127480 | MS.gene96775:CDS |
GGTTTCTTCAGATGAAGAGT+TGG | 0.531719 | 4.3:+28129492 | None:intergenic |
TCTCCTGCCTTGACAGAAAG+GGG | 0.533728 | 4.3:+28128070 | None:intergenic |
CTTGGACTTTGCGGTGAAAG+TGG | 0.534968 | 4.3:-28126897 | MS.gene96775:CDS |
AGTTGGAATATTATCAAGAA+AGG | 0.536592 | 4.3:-28126932 | MS.gene96775:CDS |
AGAATTGGAACTAGACCAGT+TGG | 0.537321 | 4.3:-28126949 | MS.gene96775:CDS |
GTCAAATCAGTAGCTTCACT+TGG | 0.539419 | 4.3:-28129462 | MS.gene96775:CDS |
TCCTCATTATCACGGCTCAT+GGG | 0.543503 | 4.3:+28127394 | None:intergenic |
TATGAAGTCAAAGGACCAGC+TGG | 0.544591 | 4.3:-28128130 | MS.gene96775:CDS |
GCAGGATCGCAAGCTGAAAG+AGG | 0.551716 | 4.3:-28127063 | MS.gene96775:intron |
CACCTCAAGATGACCCCAGA+TGG | 0.552036 | 4.3:+28127417 | None:intergenic |
TCCCAAGAGAAAAGACCAGC+TGG | 0.553440 | 4.3:+28128115 | None:intergenic |
GGTACCAGAAGGTTTAGGAT+TGG | 0.557599 | 4.3:-28129343 | MS.gene96775:CDS |
ACTGTTCAGAGACTCCATCT+GGG | 0.560536 | 4.3:-28127431 | MS.gene96775:CDS |
TTGCTGCTTCAGAGATAGGG+AGG | 0.563350 | 4.3:-28129245 | MS.gene96775:CDS |
TATTAGAGAAAGGTCAAGAG+AGG | 0.570783 | 4.3:-28129178 | MS.gene96775:CDS |
TTCTTGAAGCCACTTCCAGA+AGG | 0.577013 | 4.3:+28129407 | None:intergenic |
TATAACCGCCCTCTTCCAGA+AGG | 0.578293 | 4.3:-28127514 | MS.gene96775:CDS |
ATGATCATCTGTAGTCACTC+TGG | 0.581191 | 4.3:+28128156 | None:intergenic |
GATCATGCTTATGAAGTCAA+AGG | 0.581508 | 4.3:-28128139 | MS.gene96775:CDS |
AGATCTCATCAATTTGCCGC+AGG | 0.582417 | 4.3:+28126982 | None:intergenic |
ATTTGGAATTCTCAGATCAA+GGG | 0.583610 | 4.3:-28128692 | MS.gene96775:CDS |
TATCTGAGATTAGTAGCACT+AGG | 0.584493 | 4.3:-28127481 | MS.gene96775:CDS |
ATATGCATACACCTTGACAC+TGG | 0.586569 | 4.3:-28127626 | MS.gene96775:CDS |
CTCGGATATCCCCAGTGTCA+AGG | 0.587901 | 4.3:+28127615 | None:intergenic |
GTTATTCCAGTGCAGGTCAG+AGG | 0.594794 | 4.3:-28129004 | MS.gene96775:intron |
TAGCAGTCGGAATAAGAGAA+GGG | 0.598131 | 4.3:-28127016 | MS.gene96775:CDS |
GTAGACGTTGCTGAGACCAA+TGG | 0.600772 | 4.3:-28127568 | MS.gene96775:CDS |
TCAAGGCTTGCAATAGCAGT+CGG | 0.600784 | 4.3:-28127029 | MS.gene96775:CDS |
TGGAATATTATCAAGAAAGG+AGG | 0.602703 | 4.3:-28126929 | MS.gene96775:CDS |
CTCCTGCCTTGACAGAAAGG+GGG | 0.606795 | 4.3:+28128071 | None:intergenic |
GTTCTTACCAAGTCTGCAAG+TGG | 0.608009 | 4.3:+28128631 | None:intergenic |
ATAGCAGTCGGAATAAGAGA+AGG | 0.608578 | 4.3:-28127017 | MS.gene96775:CDS |
TTATCAAGAAAGGAGGCTCA+AGG | 0.609776 | 4.3:-28126922 | MS.gene96775:CDS |
AAAGCTAGTGTGGTACCAGA+AGG | 0.610016 | 4.3:-28129354 | MS.gene96775:CDS |
TGCTGCTTCAGAGATAGGGA+GGG | 0.612119 | 4.3:-28129244 | MS.gene96775:CDS |
GGTGAAAGTGGTGATGTCCT+TGG | 0.620946 | 4.3:-28126885 | MS.gene96775:CDS |
GGTTGTGTGATAACCAGCAA+GGG | 0.628035 | 4.3:+28127333 | None:intergenic |
TGGTTGTGTGATAACCAGCA+AGG | 0.629031 | 4.3:+28127332 | None:intergenic |
AGCAGTCGGAATAAGAGAAG+GGG | 0.636940 | 4.3:-28127015 | MS.gene96775:CDS |
GAAGCATCCCTTCTGGAAGA+GGG | 0.639736 | 4.3:+28127506 | None:intergenic |
ATACTAGCTCCTCATTATCA+CGG | 0.640006 | 4.3:+28127386 | None:intergenic |
CTGTAGTCACTCTGGCACTG+TGG | 0.648083 | 4.3:+28128164 | None:intergenic |
ATAACCGCCCTCTTCCAGAA+GGG | 0.651691 | 4.3:-28127513 | MS.gene96775:CDS |
TGATTCCAATAAGAAAGCAT+CGG | 0.654051 | 4.3:+28127453 | None:intergenic |
GACACCAGTGAAAGCTAGTG+TGG | 0.671601 | 4.3:-28129364 | MS.gene96775:CDS |
TCTGAGATTAGTAGCACTAG+GGG | 0.673869 | 4.3:-28127479 | MS.gene96775:CDS |
CTGTTCAGAGACTCCATCTG+GGG | 0.675062 | 4.3:-28127430 | MS.gene96775:CDS |
TGTGTGATAACCAGCAAGGG+CGG | 0.678647 | 4.3:+28127336 | None:intergenic |
ATGCATACACCTTGACACTG+GGG | 0.698561 | 4.3:-28127624 | MS.gene96775:CDS |
ATAGTAGAATCAGTTTCCTG+TGG | 0.701752 | 4.3:+28129123 | None:intergenic |
GCATCCCTTCTGGAAGAGGG+CGG | 0.703925 | 4.3:+28127509 | None:intergenic |
AACAACATAACAGACAACCA+TGG | 0.720499 | 4.3:+28129204 | None:intergenic |
CTGAGATTAGTAGCACTAGG+GGG | 0.740933 | 4.3:-28127478 | MS.gene96775:CDS |
TGTGTAGTAAGTTGACACCA+TGG | 0.752669 | 4.3:-28129221 | MS.gene96775:CDS |
TGAGGAGCTAGTATGCAAAG+CGG | 0.776917 | 4.3:-28127377 | MS.gene96775:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATCAATATTTGAAAACA+TGG | + | chr4.3:28127514-28127533 | None:intergenic | 15.0% |
!! | TAATCAATATTTGAAAACAT+GGG | + | chr4.3:28127513-28127532 | None:intergenic | 15.0% |
!! | ACATTTCCAAATTCAATTTA+TGG | - | chr4.3:28128242-28128261 | MS.gene96775:intron | 20.0% |
!! | TGTAATGAAATATATAGACA+CGG | + | chr4.3:28129222-28129241 | None:intergenic | 20.0% |
!!! | AAACTGATTCTACTATATAT+TGG | - | chr4.3:28127323-28127342 | MS.gene96775:intron | 20.0% |
!!! | TCATTTTCATTTTTTGTTGA+AGG | + | chr4.3:28128223-28128242 | None:intergenic | 20.0% |
!!! | TGCTTTTGTTTAAATCATAT+TGG | + | chr4.3:28128744-28128763 | None:intergenic | 20.0% |
! | AAAACAAGTAAGACTCAATT+TGG | + | chr4.3:28128170-28128189 | None:intergenic | 25.0% |
! | AAGGAAAAAGCTTCTTATTA+GGG | + | chr4.3:28127696-28127715 | None:intergenic | 25.0% |
! | AGGTAATAAACTATACATTC+AGG | - | chr4.3:28129136-28129155 | MS.gene96775:CDS | 25.0% |
! | AGTTGGAATATTATCAAGAA+AGG | - | chr4.3:28129507-28129526 | MS.gene96775:CDS | 25.0% |
! | ATAGTTTATTACCTGTTCAA+TGG | + | chr4.3:28129130-28129149 | None:intergenic | 25.0% |
! | ATGAAAAGAAACATATGAAG+AGG | + | chr4.3:28128413-28128432 | None:intergenic | 25.0% |
! | ATTTCCTCTATTTGTTCTAA+AGG | + | chr4.3:28127888-28127907 | None:intergenic | 25.0% |
! | GGTAATAAACTATACATTCA+GGG | - | chr4.3:28129137-28129156 | MS.gene96775:CDS | 25.0% |
! | TCTGATCCATAAATTGAATT+TGG | + | chr4.3:28128251-28128270 | None:intergenic | 25.0% |
! | TGATTCTACTATATATTGGT+GGG | - | chr4.3:28127327-28127346 | MS.gene96775:CDS | 25.0% |
!! | GAAATTGAGTTCTTTTCATA+TGG | - | chr4.3:28127389-28127408 | MS.gene96775:CDS | 25.0% |
!! | TCAACATCTATTAGTTTACA+AGG | - | chr4.3:28128076-28128095 | MS.gene96775:CDS | 25.0% |
!! | TTTCCTCTATTTGTTCTAAA+GGG | + | chr4.3:28127887-28127906 | None:intergenic | 25.0% |
!! | TTTCTTGATAATATTCCAAC+TGG | + | chr4.3:28129508-28129527 | None:intergenic | 25.0% |
!! | TTTTGTTGAAGGATATTGAT+GGG | + | chr4.3:28128212-28128231 | None:intergenic | 25.0% |
!! | TTTTTGTTGAAGGATATTGA+TGG | + | chr4.3:28128213-28128232 | None:intergenic | 25.0% |
!!! | TAGAAATGATGTTATTTTGC+AGG | - | chr4.3:28127138-28127157 | MS.gene96775:intron | 25.0% |
!!! | TGTTGTTTCTTATTAGAGAA+AGG | - | chr4.3:28127251-28127270 | MS.gene96775:intron | 25.0% |
ACAGAAGAAGAGAAATGAAA+AGG | + | chr4.3:28127833-28127852 | None:intergenic | 30.0% | |
ATTCAGTTCATTCAAAGTTC+AGG | + | chr4.3:28127584-28127603 | None:intergenic | 30.0% | |
CTACTTTGTCGTCAAAAAAA+GGG | + | chr4.3:28128855-28128874 | None:intergenic | 30.0% | |
CTGATTCTACTATATATTGG+TGG | - | chr4.3:28127326-28127345 | MS.gene96775:CDS | 30.0% | |
CTTAAGAACATTAACTGATC+TGG | + | chr4.3:28127967-28127986 | None:intergenic | 30.0% | |
GAAGGAAAAAGCTTCTTATT+AGG | + | chr4.3:28127697-28127716 | None:intergenic | 30.0% | |
GAGAGTTTCTCAATTAAAAC+CGG | + | chr4.3:28128130-28128149 | None:intergenic | 30.0% | |
TATTCTCATTACCATCATGT+TGG | + | chr4.3:28129165-28129184 | None:intergenic | 30.0% | |
TCTACTTTGTCGTCAAAAAA+AGG | + | chr4.3:28128856-28128875 | None:intergenic | 30.0% | |
TGGAATATTATCAAGAAAGG+AGG | - | chr4.3:28129510-28129529 | MS.gene96775:CDS | 30.0% | |
TTAATTGAGAAACTCTCCAA+AGG | - | chr4.3:28128133-28128152 | MS.gene96775:CDS | 30.0% | |
TTGAATGAACTGAATTGAGT+AGG | - | chr4.3:28127589-28127608 | MS.gene96775:CDS | 30.0% | |
! | AAATCATCTTTTGCAACCAA+AGG | - | chr4.3:28126923-28126942 | MS.gene96775:CDS | 30.0% |
! | ATGCTTCTTTTTCCTTGATA+TGG | + | chr4.3:28128553-28128572 | None:intergenic | 30.0% |
! | ATTGCATTTTACGTAGTACA+TGG | - | chr4.3:28129287-28129306 | MS.gene96775:CDS | 30.0% |
! | ATTTGGAATTCTCAGATCAA+GGG | - | chr4.3:28127747-28127766 | MS.gene96775:intron | 30.0% |
! | TGATTCCAATAAGAAAGCAT+CGG | + | chr4.3:28128989-28129008 | None:intergenic | 30.0% |
! | TTCTCTTTTCACACAAACAA+GGG | - | chr4.3:28126899-28126918 | MS.gene96775:CDS | 30.0% |
! | TTGAGTTCTTTTCATATGGT+TGG | - | chr4.3:28127393-28127412 | MS.gene96775:CDS | 30.0% |
! | TTGCATTTTACGTAGTACAT+GGG | - | chr4.3:28129288-28129307 | MS.gene96775:CDS | 30.0% |
! | TTTTCATGCTTCTCAATTCT+TGG | - | chr4.3:28128671-28128690 | MS.gene96775:CDS | 30.0% |
!! | TTCCTCTATTTGTTCTAAAG+GGG | + | chr4.3:28127886-28127905 | None:intergenic | 30.0% |
!! | TTTGGATTAGTTTCTACCTT+TGG | + | chr4.3:28128152-28128171 | None:intergenic | 30.0% |
AACAACATAACAGACAACCA+TGG | + | chr4.3:28127238-28127257 | None:intergenic | 35.0% | |
AAGAGGCAAATCTAGATTCA+AGG | - | chr4.3:28129393-28129412 | MS.gene96775:CDS | 35.0% | |
ACTACTAACCTTGAAGTTCT+TGG | + | chr4.3:28127468-28127487 | None:intergenic | 35.0% | |
ATACTAGCTCCTCATTATCA+CGG | + | chr4.3:28129056-28129075 | None:intergenic | 35.0% | |
ATAGTAGAATCAGTTTCCTG+TGG | + | chr4.3:28127319-28127338 | None:intergenic | 35.0% | |
GAACAAAGCATACAAATTGC+AGG | - | chr4.3:28129358-28129377 | MS.gene96775:CDS | 35.0% | |
GATCATGCTTATGAAGTCAA+AGG | - | chr4.3:28128300-28128319 | MS.gene96775:intron | 35.0% | |
GTACTACGTAAAATGCAATG+AGG | + | chr4.3:28129286-28129305 | None:intergenic | 35.0% | |
TAAAGGGGCTGTAAACAATA+GGG | + | chr4.3:28127871-28127890 | None:intergenic | 35.0% | |
TATGCATATCGATCTGCATT+TGG | + | chr4.3:28128802-28128821 | None:intergenic | 35.0% | |
TATTAGAGAAAGGTCAAGAG+AGG | - | chr4.3:28127261-28127280 | MS.gene96775:intron | 35.0% | |
TTATCACACAACCATTGAAC+AGG | - | chr4.3:28129116-28129135 | MS.gene96775:intron | 35.0% | |
TTCATTCAAAGTTCAGGATG+TGG | + | chr4.3:28127578-28127597 | None:intergenic | 35.0% | |
! | AGGACTTCTTTTGTATGTGA+AGG | - | chr4.3:28128096-28128115 | MS.gene96775:CDS | 35.0% |
! | AGTGCTACTAATCTCAGATA+TGG | + | chr4.3:28128958-28128977 | None:intergenic | 35.0% |
! | ATATGGTTGGTTGATTCAGT+TGG | - | chr4.3:28127406-28127425 | MS.gene96775:CDS | 35.0% |
! | ATCTGAGATTAGTAGCACTA+GGG | - | chr4.3:28128959-28128978 | MS.gene96775:intron | 35.0% |
! | CAACTAGATTTTCATTGCGA+AGG | + | chr4.3:28127783-28127802 | None:intergenic | 35.0% |
! | CATTTGGAATTCTCAGATCA+AGG | - | chr4.3:28127746-28127765 | MS.gene96775:intron | 35.0% |
! | CTTCTCTTTTCACACAAACA+AGG | - | chr4.3:28126898-28126917 | MS.gene96775:CDS | 35.0% |
! | GAAGAATGAATGTCTGAAAC+TGG | - | chr4.3:28127654-28127673 | MS.gene96775:CDS | 35.0% |
! | GGACTTCTTTTGTATGTGAA+GGG | - | chr4.3:28128097-28128116 | MS.gene96775:CDS | 35.0% |
! | TATCTGAGATTAGTAGCACT+AGG | - | chr4.3:28128958-28128977 | MS.gene96775:intron | 35.0% |
! | TCTAAAATTATGTCCACGCT+AGG | + | chr4.3:28127943-28127962 | None:intergenic | 35.0% |
!! | TCTGTTTGGAAGCATTACTT+TGG | - | chr4.3:28127286-28127305 | MS.gene96775:intron | 35.0% |
!! | TGGTTGATTCAGTTGGTAAT+TGG | - | chr4.3:28127413-28127432 | MS.gene96775:CDS | 35.0% |
!!! | ATTGGTGGGTTTCTTTTGTT+TGG | - | chr4.3:28127341-28127360 | MS.gene96775:CDS | 35.0% |
!!! | CAGTTGGTAACTTTTACTGT+AGG | - | chr4.3:28128711-28128730 | MS.gene96775:CDS | 35.0% |
AAAGTTCTGCTGCAACTTTC+TGG | + | chr4.3:28128602-28128621 | None:intergenic | 40.0% | |
AAGGGGAAAAAATGATCCTG+CGG | - | chr4.3:28129441-28129460 | MS.gene96775:CDS | 40.0% | |
ACTCTATGATATTCCTAGCG+TGG | - | chr4.3:28127927-28127946 | MS.gene96775:intron | 40.0% | |
AGAATTGGAACTAGACCAGT+TGG | - | chr4.3:28129490-28129509 | MS.gene96775:CDS | 40.0% | |
ATAGCAGTCGGAATAAGAGA+AGG | - | chr4.3:28129422-28129441 | MS.gene96775:CDS | 40.0% | |
ATATGCATACACCTTGACAC+TGG | - | chr4.3:28128813-28128832 | MS.gene96775:CDS | 40.0% | |
ATGATCATCTGTAGTCACTC+TGG | + | chr4.3:28128286-28128305 | None:intergenic | 40.0% | |
CACATTCATAACTGTGCAGT+TGG | - | chr4.3:28128695-28128714 | MS.gene96775:CDS | 40.0% | |
CTAAAGGGGCTGTAAACAAT+AGG | + | chr4.3:28127872-28127891 | None:intergenic | 40.0% | |
GATCTTCGAGCAGAAAGAAT+TGG | - | chr4.3:28129475-28129494 | MS.gene96775:CDS | 40.0% | |
GGATTTATCCACAACCTCTT+AGG | + | chr4.3:28127166-28127185 | None:intergenic | 40.0% | |
GGTTTCTTCAGATGAAGAGT+TGG | + | chr4.3:28126950-28126969 | None:intergenic | 40.0% | |
GTAATTGGTTATTCCAGTGC+AGG | - | chr4.3:28127428-28127447 | MS.gene96775:CDS | 40.0% | |
GTCAAAAAAAGGGTCTGACT+CGG | + | chr4.3:28128845-28128864 | None:intergenic | 40.0% | |
GTCAAATCAGTAGCTTCACT+TGG | - | chr4.3:28126977-28126996 | MS.gene96775:CDS | 40.0% | |
TAGCAGTCGGAATAAGAGAA+GGG | - | chr4.3:28129423-28129442 | MS.gene96775:CDS | 40.0% | |
TATGCATACACCTTGACACT+GGG | - | chr4.3:28128814-28128833 | MS.gene96775:CDS | 40.0% | |
TGCTGTCTGAGAAAAACCAT+TGG | + | chr4.3:28128890-28128909 | None:intergenic | 40.0% | |
TTACTTTGGTATTCTGCCAC+AGG | - | chr4.3:28127300-28127319 | MS.gene96775:intron | 40.0% | |
TTATCAAGAAAGGAGGCTCA+AGG | - | chr4.3:28129517-28129536 | MS.gene96775:CDS | 40.0% | |
TTTCCTTGATATGGAAGAGC+TGG | + | chr4.3:28128544-28128563 | None:intergenic | 40.0% | |
! | AGTATTTTGCAAGGTCTCCA+AGG | + | chr4.3:28129574-28129593 | None:intergenic | 40.0% |
! | ATGGCTACAATCTTTTCTGG+AGG | - | chr4.3:28126863-28126882 | MS.gene96775:CDS | 40.0% |
! | GCAATCCAAGCTGTATTTTG+AGG | - | chr4.3:28128622-28128641 | MS.gene96775:intron | 40.0% |
! | TCTGAGATTAGTAGCACTAG+GGG | - | chr4.3:28128960-28128979 | MS.gene96775:intron | 40.0% |
! | TGTGTAGTAAGTTGACACCA+TGG | - | chr4.3:28127218-28127237 | MS.gene96775:intron | 40.0% |
!! | AGCCCCTTTAGAACAAATAG+AGG | - | chr4.3:28127881-28127900 | MS.gene96775:intron | 40.0% |
!! | CTTTCTGGCACTGATACATT+TGG | + | chr4.3:28128587-28128606 | None:intergenic | 40.0% |
!! | GCTACTGATTTGACAGAGAA+AGG | + | chr4.3:28126971-28126990 | None:intergenic | 40.0% |
!! | TTATTTTGCAGGTGCCTAAG+AGG | - | chr4.3:28127149-28127168 | MS.gene96775:intron | 40.0% |
AAAGCTAGTGTGGTACCAGA+AGG | - | chr4.3:28127085-28127104 | MS.gene96775:intron | 45.0% | |
AAGAAGTCATCCAGTGTCAC+AGG | + | chr4.3:28127721-28127740 | None:intergenic | 45.0% | |
AAGCAATGCAGAGTTAGCTC+TGG | - | chr4.3:28128759-28128778 | MS.gene96775:CDS | 45.0% | |
AATACATCCATGTCCATCCG+AGG | - | chr4.3:28128465-28128484 | MS.gene96775:intron | 45.0% | |
ACTGTTCAGAGACTCCATCT+GGG | - | chr4.3:28129008-28129027 | MS.gene96775:intron | 45.0% | |
AGATCTCATCAATTTGCCGC+AGG | + | chr4.3:28129460-28129479 | None:intergenic | 45.0% | |
AGCAGTCGGAATAAGAGAAG+GGG | - | chr4.3:28129424-28129443 | MS.gene96775:CDS | 45.0% | |
AGTGTGGTACCAGAAGGTTT+AGG | - | chr4.3:28127091-28127110 | MS.gene96775:intron | 45.0% | |
ATACATCCATGTCCATCCGA+GGG | - | chr4.3:28128466-28128485 | MS.gene96775:intron | 45.0% | |
ATGCATACACCTTGACACTG+GGG | - | chr4.3:28128815-28128834 | MS.gene96775:CDS | 45.0% | |
CATTCAGGGTTCCAACATGA+TGG | - | chr4.3:28129151-28129170 | MS.gene96775:CDS | 45.0% | |
CTCAAGGATCTTGGACTTTG+CGG | - | chr4.3:28129533-28129552 | MS.gene96775:CDS | 45.0% | |
CTGAGATTAGTAGCACTAGG+GGG | - | chr4.3:28128961-28128980 | MS.gene96775:intron | 45.0% | |
GAAGAGCTCCAAGAACTTCA+AGG | - | chr4.3:28127457-28127476 | MS.gene96775:CDS | 45.0% | |
GACACTGGATGACTTCTTCT+GGG | - | chr4.3:28127723-28127742 | MS.gene96775:intron | 45.0% | |
GATGACTTCTTCTGGGCATT+TGG | - | chr4.3:28127730-28127749 | MS.gene96775:intron | 45.0% | |
GCAACCAATCCTAAACCTTC+TGG | + | chr4.3:28127103-28127122 | None:intergenic | 45.0% | |
GGGATTACCTATTTGCCCTA+AGG | - | chr4.3:28128343-28128362 | MS.gene96775:intron | 45.0% | |
GGTCAAGAGAGGATTCTGTT+TGG | - | chr4.3:28127272-28127291 | MS.gene96775:intron | 45.0% | |
GGTTGTGTGATAACCAGCAA+GGG | + | chr4.3:28129109-28129128 | None:intergenic | 45.0% | |
GTATGTGAAGGGTCGTAAAC+CGG | - | chr4.3:28128108-28128127 | MS.gene96775:CDS | 45.0% | |
GTTCTTACCAAGTCTGCAAG+TGG | + | chr4.3:28127811-28127830 | None:intergenic | 45.0% | |
TAGCCAGCTCTTCCATATCA+AGG | - | chr4.3:28128538-28128557 | MS.gene96775:intron | 45.0% | |
TATGAAGTCAAAGGACCAGC+TGG | - | chr4.3:28128309-28128328 | MS.gene96775:intron | 45.0% | |
TCAAGGCTTGCAATAGCAGT+CGG | - | chr4.3:28129410-28129429 | MS.gene96775:CDS | 45.0% | |
TCCTCATTATCACGGCTCAT+GGG | + | chr4.3:28129048-28129067 | None:intergenic | 45.0% | |
TGACACTGGATGACTTCTTC+TGG | - | chr4.3:28127722-28127741 | MS.gene96775:intron | 45.0% | |
TGAGGAGCTAGTATGCAAAG+CGG | - | chr4.3:28129062-28129081 | MS.gene96775:intron | 45.0% | |
TGGAAGTGGCTTCAAGAAGA+AGG | - | chr4.3:28127037-28127056 | MS.gene96775:CDS | 45.0% | |
TGGTTGTGTGATAACCAGCA+AGG | + | chr4.3:28129110-28129129 | None:intergenic | 45.0% | |
TGTGATTCCACTTGCAGACT+TGG | - | chr4.3:28127801-28127820 | MS.gene96775:intron | 45.0% | |
TTCCAGAAGGTTTGAACTGC+TGG | + | chr4.3:28127022-28127041 | None:intergenic | 45.0% | |
TTCTCCTGCCTTGACAGAAA+GGG | + | chr4.3:28128373-28128392 | None:intergenic | 45.0% | |
TTCTTGAAGCCACTTCCAGA+AGG | + | chr4.3:28127035-28127054 | None:intergenic | 45.0% | |
TTGCGCCTCAAAATACAGCT+TGG | + | chr4.3:28128630-28128649 | None:intergenic | 45.0% | |
! | CAGATGAAGAGTTGGTCCTT+TGG | + | chr4.3:28126942-28126961 | None:intergenic | 45.0% |
! | CAGTTCAAACCTTCTGGAAG+TGG | - | chr4.3:28127023-28127042 | MS.gene96775:CDS | 45.0% |
! | CTGTTGCTGCTTCAGAGATA+GGG | - | chr4.3:28127191-28127210 | MS.gene96775:intron | 45.0% |
! | GGTACCAGAAGGTTTAGGAT+TGG | - | chr4.3:28127096-28127115 | MS.gene96775:intron | 45.0% |
! | TTTTCCTTCTCCTGTGACAC+TGG | - | chr4.3:28127708-28127727 | MS.gene96775:CDS | 45.0% |
!! | ACTAGCTTTCACTGGTGTCT+TGG | + | chr4.3:28127074-28127093 | None:intergenic | 45.0% |
!! | AGATATGGAAGCATCCCTTC+TGG | + | chr4.3:28128943-28128962 | None:intergenic | 45.0% |
!! | GGGTACCGATGCTTTCTTAT+TGG | - | chr4.3:28128981-28129000 | MS.gene96775:intron | 45.0% |
!!! | ACCAGCTGGTCTTTTCTCTT+GGG | - | chr4.3:28128323-28128342 | MS.gene96775:intron | 45.0% |
ATAACCGCCCTCTTCCAGAA+GGG | - | chr4.3:28128926-28128945 | MS.gene96775:intron | 50.0% | |
CACTGTTCAGAGACTCCATC+TGG | - | chr4.3:28129007-28129026 | MS.gene96775:intron | 50.0% | |
CTCCAGCAGTTCAAACCTTC+TGG | - | chr4.3:28127017-28127036 | MS.gene96775:CDS | 50.0% | |
CTCCTCATTATCACGGCTCA+TGG | + | chr4.3:28129049-28129068 | None:intergenic | 50.0% | |
CTGTTCAGAGACTCCATCTG+GGG | - | chr4.3:28129009-28129028 | MS.gene96775:intron | 50.0% | |
CTTGGACTTTGCGGTGAAAG+TGG | - | chr4.3:28129542-28129561 | MS.gene96775:CDS | 50.0% | |
GAAAGGAGGCTCAAGGATCT+TGG | - | chr4.3:28129524-28129543 | MS.gene96775:CDS | 50.0% | |
GACACCAGTGAAAGCTAGTG+TGG | - | chr4.3:28127075-28127094 | MS.gene96775:intron | 50.0% | |
GTAGACGTTGCTGAGACCAA+TGG | - | chr4.3:28128871-28128890 | MS.gene96775:intron | 50.0% | |
GTTATTCCAGTGCAGGTCAG+AGG | - | chr4.3:28127435-28127454 | MS.gene96775:CDS | 50.0% | |
GTTCTCCTGCCTTGACAGAA+AGG | + | chr4.3:28128374-28128393 | None:intergenic | 50.0% | |
TACATCCATGTCCATCCGAG+GGG | - | chr4.3:28128467-28128486 | MS.gene96775:intron | 50.0% | |
TATAACCGCCCTCTTCCAGA+AGG | - | chr4.3:28128925-28128944 | MS.gene96775:intron | 50.0% | |
TCATCCAGTGTCACAGGAGA+AGG | + | chr4.3:28127715-28127734 | None:intergenic | 50.0% | |
TCCCAAGAGAAAAGACCAGC+TGG | + | chr4.3:28128327-28128346 | None:intergenic | 50.0% | |
TCTCCTGCCTTGACAGAAAG+GGG | + | chr4.3:28128372-28128391 | None:intergenic | 50.0% | |
TGTGTGATAACCAGCAAGGG+CGG | + | chr4.3:28129106-28129125 | None:intergenic | 50.0% | |
TTCTGTCAAGGCAGGAGAAC+AGG | - | chr4.3:28128374-28128393 | MS.gene96775:intron | 50.0% | |
! | GAAGCATCCCTTCTGGAAGA+GGG | + | chr4.3:28128936-28128955 | None:intergenic | 50.0% |
! | GCTGTTGCTGCTTCAGAGAT+AGG | - | chr4.3:28127190-28127209 | MS.gene96775:intron | 50.0% |
! | GGTGAAAGTGGTGATGTCCT+TGG | - | chr4.3:28129554-28129573 | MS.gene96775:CDS | 50.0% |
! | TCTGAAGCAGCAACAGCATC+AGG | + | chr4.3:28127187-28127206 | None:intergenic | 50.0% |
! | TGCTGCTTCAGAGATAGGGA+GGG | - | chr4.3:28127195-28127214 | MS.gene96775:intron | 50.0% |
! | TTGCTGCTTCAGAGATAGGG+AGG | - | chr4.3:28127194-28127213 | MS.gene96775:intron | 50.0% |
!! | GCAGAGTTAGCTCTGGACTA+TGG | - | chr4.3:28128766-28128785 | MS.gene96775:CDS | 50.0% |
!! | GGTACCACACTAGCTTTCAC+TGG | + | chr4.3:28127082-28127101 | None:intergenic | 50.0% |
!!! | GACCAGCTGGTCTTTTCTCT+TGG | - | chr4.3:28128322-28128341 | MS.gene96775:intron | 50.0% |
AAGGAGCCCCCTTTCTGTCA+AGG | - | chr4.3:28128362-28128381 | MS.gene96775:intron | 55.0% | |
CACCTCAAGATGACCCCAGA+TGG | + | chr4.3:28129025-28129044 | None:intergenic | 55.0% | |
CTCCTGCCTTGACAGAAAGG+GGG | + | chr4.3:28128371-28128390 | None:intergenic | 55.0% | |
CTCGGATATCCCCAGTGTCA+AGG | + | chr4.3:28128827-28128846 | None:intergenic | 55.0% | |
CTGTAGTCACTCTGGCACTG+TGG | + | chr4.3:28128278-28128297 | None:intergenic | 55.0% | |
GAAAACCCCTCGGATGGACA+TGG | + | chr4.3:28128475-28128494 | None:intergenic | 55.0% | |
GACAGAAAGGGGGCTCCTTA+GGG | + | chr4.3:28128361-28128380 | None:intergenic | 55.0% | |
GCAGGATCGCAAGCTGAAAG+AGG | - | chr4.3:28129376-28129395 | MS.gene96775:CDS | 55.0% | |
TCCTACCGTCGAAAACCCCT+CGG | + | chr4.3:28128485-28128504 | None:intergenic | 55.0% | |
TGACAGAAAGGGGGCTCCTT+AGG | + | chr4.3:28128362-28128381 | None:intergenic | 55.0% | |
TGCAGGTGCCTAAGAGGTTG+TGG | - | chr4.3:28127155-28127174 | MS.gene96775:intron | 55.0% | |
! | CTCCATCTGGGGTCATCTTG+AGG | - | chr4.3:28129020-28129039 | MS.gene96775:intron | 55.0% |
! | GCCCATGAGCCGTGATAATG+AGG | - | chr4.3:28129044-28129063 | MS.gene96775:intron | 55.0% |
! | TCCATCCGAGGGGTTTTCGA+CGG | - | chr4.3:28128477-28128496 | MS.gene96775:intron | 55.0% |
!! | GGAAGCATCCCTTCTGGAAG+AGG | + | chr4.3:28128937-28128956 | None:intergenic | 55.0% |
ACCGTCGAAAACCCCTCGGA+TGG | + | chr4.3:28128481-28128500 | None:intergenic | 60.0% | |
AGCCCCCTTTCTGTCAAGGC+AGG | - | chr4.3:28128366-28128385 | MS.gene96775:intron | 60.0% | |
GCTCTTCCTCTGACCTGCAC+TGG | + | chr4.3:28127444-28127463 | None:intergenic | 60.0% | |
GGGGGCTCCTTAGGGCAAAT+AGG | + | chr4.3:28128353-28128372 | None:intergenic | 60.0% | |
! | ACCAGCAAGGGCGGATTTGC+AGG | + | chr4.3:28129097-28129116 | None:intergenic | 60.0% |
! | GCATCCCTTCTGGAAGAGGG+CGG | + | chr4.3:28128933-28128952 | None:intergenic | 60.0% |
! | TCCGAGGGGTTTTCGACGGT+AGG | - | chr4.3:28128481-28128500 | MS.gene96775:intron | 60.0% |
GCCTGCAAATCCGCCCTTGC+TGG | - | chr4.3:28129093-28129112 | MS.gene96775:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 28126863 | 28129598 | 28126863 | ID=MS.gene96775 |
chr4.3 | mRNA | 28126863 | 28129598 | 28126863 | ID=MS.gene96775.t1;Parent=MS.gene96775 |
chr4.3 | exon | 28129117 | 28129598 | 28129117 | ID=MS.gene96775.t1.exon1;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28129117 | 28129598 | 28129117 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
chr4.3 | exon | 28128983 | 28129011 | 28128983 | ID=MS.gene96775.t1.exon2;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28128983 | 28129011 | 28128983 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
chr4.3 | exon | 28128639 | 28128850 | 28128639 | ID=MS.gene96775.t1.exon3;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28128639 | 28128850 | 28128639 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
chr4.3 | exon | 28128066 | 28128191 | 28128066 | ID=MS.gene96775.t1.exon4;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28128066 | 28128191 | 28128066 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
chr4.3 | exon | 28127324 | 28127728 | 28127324 | ID=MS.gene96775.t1.exon5;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28127324 | 28127728 | 28127324 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
chr4.3 | exon | 28126863 | 28127081 | 28126863 | ID=MS.gene96775.t1.exon6;Parent=MS.gene96775.t1 |
chr4.3 | CDS | 28126863 | 28127081 | 28126863 | ID=cds.MS.gene96775.t1;Parent=MS.gene96775.t1 |
Gene Sequence |
Protein sequence |