Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063077.t1 | XP_003604081.1 | 92.5 | 573 | 20 | 5 | 1 | 551 | 1 | 572 | 1.60E-242 | 848.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063077.t1 | O22056 | 65.6 | 433 | 140 | 4 | 126 | 551 | 140 | 570 | 1.2e-148 | 528.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063077.t1 | G7J988 | 92.5 | 573 | 20 | 5 | 1 | 551 | 1 | 572 | 1.2e-242 | 848.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene063077 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene063077 | 0.801976 | 6.98E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene063077 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene063077 | 0.870994 | 9.58E-67 | -1.69E-46 |
| MS.gene049614 | MS.gene063077 | 0.861788 | 8.02E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene063077 | 0.802691 | 4.98E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene063077 | 0.859365 | 4.35E-63 | -1.69E-46 |
| MS.gene050165 | MS.gene063077 | 0.83474 | 2.52E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene063077 | 0.819141 | 1.36E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene063077 | 0.814655 | 1.38E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene063077 | 0.852031 | 6.03E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene063077 | 0.853681 | 2.03E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene063077 | 0.804005 | 2.66E-49 | -1.69E-46 |
| MS.gene050781 | MS.gene063077 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene050783 | MS.gene063077 | 0.832522 | 9.01E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene063077 | 0.82881 | 7.31E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene063077 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene063077 | 0.890457 | 9.68E-74 | -1.69E-46 |
| MS.gene052271 | MS.gene063077 | 0.837373 | 5.40E-57 | -1.69E-46 |
| MS.gene052290 | MS.gene063077 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene063077 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene052670 | MS.gene063077 | 0.835377 | 1.74E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene063077 | 0.830334 | 3.11E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene063077 | 0.823898 | 1.08E-53 | -1.69E-46 |
| MS.gene053322 | MS.gene063077 | 0.859398 | 4.25E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene063077 | 0.806885 | 6.62E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene063077 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene063077 | 0.840089 | 1.07E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene063077 | 0.804272 | 2.34E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene063077 | 0.825703 | 4.06E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene063077 | 0.829738 | 4.35E-55 | -1.69E-46 |
| MS.gene054803 | MS.gene063077 | 0.83112 | 2.00E-55 | -1.69E-46 |
| MS.gene054804 | MS.gene063077 | 0.831215 | 1.89E-55 | -1.69E-46 |
| MS.gene055397 | MS.gene063077 | 0.848763 | 4.98E-60 | -1.69E-46 |
| MS.gene055412 | MS.gene063077 | 0.865872 | 4.31E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene063077 | 0.869413 | 3.15E-66 | -1.69E-46 |
| MS.gene056374 | MS.gene063077 | 0.804008 | 2.65E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene063077 | 0.815104 | 1.10E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene063077 | 0.847775 | 9.34E-60 | -1.69E-46 |
| MS.gene057129 | MS.gene063077 | 0.846224 | 2.48E-59 | -1.69E-46 |
| MS.gene057146 | MS.gene063077 | 0.813744 | 2.19E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene063077 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene063077 | 0.813457 | 2.54E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene063077 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene063077 | 0.80172 | 7.88E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene063077 | 0.812082 | 5.07E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene063077 | 0.80549 | 1.30E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene063077 | 0.816085 | 6.63E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene063077 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene063077 | 0.838083 | 3.55E-57 | -1.69E-46 |
| MS.gene059677 | MS.gene063077 | 0.807613 | 4.64E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene063077 | 0.800816 | 1.21E-48 | -1.69E-46 |
| MS.gene059858 | MS.gene063077 | 0.809251 | 2.08E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene063077 | 0.866416 | 2.90E-65 | -1.69E-46 |
| MS.gene060675 | MS.gene063077 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene063077 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene063077 | 0.83714 | 6.20E-57 | -1.69E-46 |
| MS.gene061171 | MS.gene063077 | 0.819133 | 1.36E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene063077 | 0.869181 | 3.75E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063077.t1 | MTR_3g118290 | 91.638 | 574 | 23 | 6 | 1 | 551 | 1 | 572 | 0.0 | 948 |
| MS.gene063077.t1 | MTR_7g101840 | 35.219 | 389 | 243 | 2 | 169 | 548 | 164 | 552 | 2.72e-76 | 251 |
| MS.gene063077.t1 | MTR_1g063850 | 36.388 | 371 | 229 | 3 | 184 | 548 | 187 | 556 | 2.79e-74 | 246 |
| MS.gene063077.t1 | MTR_1g007370 | 33.542 | 319 | 198 | 4 | 239 | 549 | 235 | 547 | 4.07e-59 | 206 |
| MS.gene063077.t1 | MTR_3g033420 | 32.558 | 301 | 198 | 1 | 250 | 550 | 108 | 403 | 9.54e-47 | 169 |
| MS.gene063077.t1 | MTR_0172s0030 | 31.475 | 305 | 199 | 6 | 253 | 550 | 201 | 502 | 2.39e-42 | 159 |
| MS.gene063077.t1 | MTR_3g090900 | 29.191 | 346 | 217 | 8 | 225 | 550 | 177 | 514 | 2.56e-32 | 130 |
| MS.gene063077.t1 | MTR_1g007370 | 33.125 | 160 | 100 | 2 | 239 | 391 | 235 | 394 | 1.43e-29 | 120 |
| MS.gene063077.t1 | MTR_3g090900 | 25.556 | 270 | 185 | 6 | 194 | 448 | 145 | 413 | 1.06e-18 | 89.4 |
| MS.gene063077.t1 | MTR_3g033150 | 29.801 | 151 | 106 | 0 | 400 | 550 | 4 | 154 | 1.01e-15 | 75.1 |
| MS.gene063077.t1 | MTR_3g090900 | 25.926 | 216 | 144 | 6 | 194 | 394 | 145 | 359 | 5.45e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063077.t1 | AT1G08540 | 55.214 | 585 | 207 | 11 | 6 | 551 | 2 | 570 | 0.0 | 573 |
| MS.gene063077.t1 | AT2G36990 | 37.640 | 356 | 221 | 1 | 193 | 548 | 188 | 542 | 1.44e-77 | 254 |
| MS.gene063077.t1 | AT3G53920 | 34.405 | 311 | 198 | 2 | 240 | 549 | 264 | 569 | 3.21e-61 | 212 |
| MS.gene063077.t1 | AT5G13730 | 33.882 | 304 | 188 | 2 | 253 | 551 | 122 | 417 | 3.35e-52 | 184 |
| MS.gene063077.t1 | AT1G64860 | 29.775 | 356 | 228 | 9 | 203 | 550 | 159 | 500 | 1.09e-38 | 149 |
| MS.gene063077.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 253 | 550 | 219 | 517 | 2.18e-37 | 145 |
| MS.gene063077.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 253 | 550 | 219 | 517 | 2.18e-37 | 145 |
| MS.gene063077.t1 | AT5G24120 | 30.233 | 301 | 205 | 3 | 253 | 550 | 219 | 517 | 2.18e-37 | 145 |
| MS.gene063077.t1 | AT1G64860 | 29.677 | 310 | 197 | 8 | 203 | 504 | 159 | 455 | 6.87e-31 | 126 |
| MS.gene063077.t1 | AT3G53920 | 32.895 | 152 | 97 | 1 | 240 | 391 | 264 | 410 | 4.75e-28 | 117 |
Find 125 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGAGATCTGGGAGCTTT+TGG | 0.189205 | 3.3:+95931376 | None:intergenic |
| GCCAGAAGAGTCAGAGCTTC+TGG | 0.195456 | 3.3:-95933494 | MS.gene063077:CDS |
| CTAAGAAAACGTTTGAATTA+TGG | 0.201254 | 3.3:-95932600 | MS.gene063077:CDS |
| TCTTCGGCTGTTTCAGCTTC+AGG | 0.261013 | 3.3:+95931204 | None:intergenic |
| GTGTCTTGTAATTGTTGTTT+TGG | 0.271370 | 3.3:+95934021 | None:intergenic |
| GAGAGAAACAGGTGATTAAA+TGG | 0.275402 | 3.3:-95931119 | MS.gene063077:CDS |
| CTGAAAATTTACTTCTCAAA+TGG | 0.275681 | 3.3:-95933712 | MS.gene063077:CDS |
| ATCAGTTGCTAAGAATTATC+AGG | 0.278584 | 3.3:-95932529 | MS.gene063077:CDS |
| CCCAGAAGCTCTGACTCTTC+TGG | 0.279014 | 3.3:+95933493 | None:intergenic |
| AAACAGTTGTACAGTGAAAA+TGG | 0.280971 | 3.3:-95931475 | MS.gene063077:CDS |
| CGGTGGGTAGGGATTCTGTC+TGG | 0.304390 | 3.3:+95934167 | None:intergenic |
| AACTTTCTGTTCTAGAGATC+TGG | 0.306670 | 3.3:+95931366 | None:intergenic |
| CATTAAGCAGTTCATGAAAA+AGG | 0.308002 | 3.3:-95931175 | MS.gene063077:CDS |
| CAGGTGATTAAATGGAGATT+TGG | 0.320492 | 3.3:-95931111 | MS.gene063077:CDS |
| GAAGAAGTTGCCGAAGCAAC+TGG | 0.327598 | 3.3:-95931436 | MS.gene063077:CDS |
| AGAGAAGTATGATGCTTCTA+AGG | 0.329199 | 3.3:-95932103 | MS.gene063077:CDS |
| TTCAGAGAACTTAATTTCTT+CGG | 0.359443 | 3.3:+95933331 | None:intergenic |
| CCAGCCCACATTTGCTCAAT+GGG | 0.361480 | 3.3:-95932652 | MS.gene063077:CDS |
| GTGGTTGTTGATTATGTTGT+GGG | 0.362716 | 3.3:+95933753 | None:intergenic |
| TTAAAGTCATCCTCTTGGTT+GGG | 0.376197 | 3.3:+95933602 | None:intergenic |
| GCTAAGAATTATCAGGGATC+TGG | 0.378393 | 3.3:-95932522 | MS.gene063077:CDS |
| TGAAGACACTGCAAGAGATT+GGG | 0.385412 | 3.3:-95931071 | MS.gene063077:CDS |
| TCGGCAACTTCTTCATCGTC+AGG | 0.396141 | 3.3:+95931445 | None:intergenic |
| ATGAAGACACTGCAAGAGAT+TGG | 0.396405 | 3.3:-95931072 | MS.gene063077:CDS |
| GTTGTTGATTATGTTGTGGG+GGG | 0.398745 | 3.3:+95933756 | None:intergenic |
| GCTCAATGGGCTACAATGGC+AGG | 0.402429 | 3.3:-95932639 | MS.gene063077:CDS |
| AGTTCTCAACCTATGCTCAT+TGG | 0.407789 | 3.3:-95932074 | MS.gene063077:CDS |
| TGAAGATGTTCCATTATATC+TGG | 0.410021 | 3.3:+95933632 | None:intergenic |
| TGAAAATTTACTTCTCAAAT+GGG | 0.410175 | 3.3:-95933711 | MS.gene063077:CDS |
| TTAATCACCTGTTTCTCTCT+AGG | 0.411679 | 3.3:+95931123 | None:intergenic |
| TCTCAATCCTAGAGAGAAAC+AGG | 0.412404 | 3.3:-95931130 | MS.gene063077:CDS |
| GCCAGCCCACATTTGCTCAA+TGG | 0.421203 | 3.3:-95932653 | MS.gene063077:CDS |
| CCAGAAGAGTCAGAGCTTCT+GGG | 0.422406 | 3.3:-95933493 | MS.gene063077:CDS |
| GATGATGATGGCGGTGGGTA+GGG | 0.432222 | 3.3:+95934156 | None:intergenic |
| AAAGGACCTGGAAAAGGTAT+TGG | 0.433707 | 3.3:-95931157 | MS.gene063077:CDS |
| CATCGACAGCCCAGTTGCTT+CGG | 0.435866 | 3.3:+95931426 | None:intergenic |
| GGCAATGGATACAGCATCTT+CGG | 0.444268 | 3.3:+95933670 | None:intergenic |
| CTGCTTAATGAGCTGTTCTT+CGG | 0.445939 | 3.3:+95931188 | None:intergenic |
| TGCTCATTGGTGGATTAAAC+AGG | 0.447444 | 3.3:-95932061 | MS.gene063077:CDS |
| ACCAGCAGGACCAGATATAA+TGG | 0.448188 | 3.3:-95933642 | MS.gene063077:CDS |
| GGTGGTGGAACCAGACTTGA+AGG | 0.448899 | 3.3:+95933448 | None:intergenic |
| TGGGATGAGTCTGCAAGATC+TGG | 0.448927 | 3.3:-95932502 | MS.gene063077:CDS |
| GCTTAACAGTTCCACATGGT+GGG | 0.453802 | 3.3:-95931526 | MS.gene063077:intron |
| GGAGTTTGCCTGAGAGACAT+AGG | 0.455446 | 3.3:+95933913 | None:intergenic |
| GAGAACTTAATTTCTTCGGA+TGG | 0.458689 | 3.3:+95933335 | None:intergenic |
| GGTTGTTGATTATGTTGTGG+GGG | 0.461383 | 3.3:+95933755 | None:intergenic |
| GGAAATGATGGGTGTAAGTA+GGG | 0.462570 | 3.3:-95931049 | MS.gene063077:CDS |
| TAAGTTCTCTGAAGGAATAC+AGG | 0.465978 | 3.3:-95933321 | MS.gene063077:intron |
| GGGAAATGATGGGTGTAAGT+AGG | 0.467729 | 3.3:-95931050 | MS.gene063077:CDS |
| CTTGAAGGAGACGATGTTTG+TGG | 0.468675 | 3.3:+95933463 | None:intergenic |
| TCCATTATATCTGGTCCTGC+TGG | 0.469713 | 3.3:+95933641 | None:intergenic |
| TGATTCTACAGATGAGGAGG+AGG | 0.471033 | 3.3:+95933892 | None:intergenic |
| GGATGCCGCGGGCTTGTAAG+AGG | 0.472869 | 3.3:-95932129 | MS.gene063077:CDS |
| TCCTGCTGGTCCAGTGGCAA+TGG | 0.473175 | 3.3:+95933655 | None:intergenic |
| AGATCTCTAGAACAGAAAGT+TGG | 0.474573 | 3.3:-95931364 | MS.gene063077:CDS |
| ACCTTGGCCCTATGTCTCTC+AGG | 0.475145 | 3.3:-95933921 | MS.gene063077:CDS |
| AACATCGTCTCCTTCAAGTC+TGG | 0.484299 | 3.3:-95933458 | MS.gene063077:CDS |
| ATTAAAGTCATCCTCTTGGT+TGG | 0.488896 | 3.3:+95933601 | None:intergenic |
| GAGCATCAAATTTGAAATCA+AGG | 0.489172 | 3.3:+95933969 | None:intergenic |
| CTAAGAATTATCAGGGATCT+GGG | 0.490714 | 3.3:-95932521 | MS.gene063077:CDS |
| GATCTCTAGAACAGAAAGTT+GGG | 0.490872 | 3.3:-95931363 | MS.gene063077:CDS |
| GGCTTAACAGTTCCACATGG+TGG | 0.491941 | 3.3:-95931527 | MS.gene063077:intron |
| ACTTTCTGTTCTAGAGATCT+GGG | 0.492366 | 3.3:+95931367 | None:intergenic |
| GCAAGAGATTGGGGAAATGA+TGG | 0.494350 | 3.3:-95931061 | MS.gene063077:CDS |
| GGTGGGTAGGGATTCTGTCT+GGG | 0.501734 | 3.3:+95934168 | None:intergenic |
| TCTCAACCTATGCTCATTGG+TGG | 0.502003 | 3.3:-95932071 | MS.gene063077:CDS |
| GGTGGATTAAACAGGCAGTT+CGG | 0.505718 | 3.3:-95932053 | MS.gene063077:CDS |
| TCCATTGCCACTGGACCAGC+AGG | 0.505748 | 3.3:-95933656 | MS.gene063077:CDS |
| TGAAGCTCTTACTCTTGCTA+AGG | 0.508265 | 3.3:-95933828 | MS.gene063077:intron |
| TAAAGTCATCCTCTTGGTTG+GGG | 0.508635 | 3.3:+95933603 | None:intergenic |
| AAAATACTGCTGCAAATGCT+TGG | 0.508949 | 3.3:+95930969 | None:intergenic |
| TGGAGATTTGGTATGGATGA+TGG | 0.516643 | 3.3:-95931099 | MS.gene063077:CDS |
| CATCATTAAAGTCATCCTCT+TGG | 0.522501 | 3.3:+95933597 | None:intergenic |
| ATCTGGTCCTGCTGGTCCAG+TGG | 0.527770 | 3.3:+95933649 | None:intergenic |
| CCCATTGAGCAAATGTGGGC+TGG | 0.527803 | 3.3:+95932652 | None:intergenic |
| GTTGTTCTTAAGTAACGCAA+TGG | 0.530950 | 3.3:+95933383 | None:intergenic |
| TGATGATGATGGCGGTGGGT+AGG | 0.533434 | 3.3:+95934155 | None:intergenic |
| TCAAGTCTGGTTCCACCACC+AGG | 0.536953 | 3.3:-95933445 | MS.gene063077:CDS |
| GATTAAATGGAGATTTGGTA+TGG | 0.540033 | 3.3:-95931106 | MS.gene063077:CDS |
| CTTAACAGTTCCACATGGTG+GGG | 0.543723 | 3.3:-95931525 | MS.gene063077:intron |
| GGTGGTTGTTGATTATGTTG+TGG | 0.547660 | 3.3:+95933752 | None:intergenic |
| AGACTGAAAGTTTAAGACTC+TGG | 0.548233 | 3.3:+95931335 | None:intergenic |
| TGTAGCCCATTGAGCAAATG+TGG | 0.553613 | 3.3:+95932647 | None:intergenic |
| CTCAATGGGCTACAATGGCA+GGG | 0.555592 | 3.3:-95932638 | MS.gene063077:CDS |
| TCTCAAATGGGTTCAACACA+TGG | 0.558500 | 3.3:-95933699 | MS.gene063077:CDS |
| TCAGGGGTGGAAGGAAGTTG+CGG | 0.559046 | 3.3:+95933731 | None:intergenic |
| ATTTGCTCAATGGGCTACAA+TGG | 0.559335 | 3.3:-95932643 | MS.gene063077:CDS |
| TTGTTGATTATGTTGTGGGG+GGG | 0.562248 | 3.3:+95933757 | None:intergenic |
| GAAGAAATTAAGTTCTCTGA+AGG | 0.563158 | 3.3:-95933329 | MS.gene063077:CDS |
| GAAGACACTGCAAGAGATTG+GGG | 0.566948 | 3.3:-95931070 | MS.gene063077:CDS |
| GGCTGCTGCAAAGCTTGCAA+AGG | 0.568821 | 3.3:-95933807 | MS.gene063077:CDS |
| GAGAAGTATGATGCTTCTAA+GGG | 0.570079 | 3.3:-95932102 | MS.gene063077:CDS |
| CAACTGGGCTGTCGATGAAG+AGG | 0.570194 | 3.3:-95931420 | MS.gene063077:CDS |
| AAGTGATTCTACAGATGAGG+AGG | 0.571659 | 3.3:+95933889 | None:intergenic |
| AAGAGTCAGAGCTTCTGGGA+AGG | 0.580062 | 3.3:-95933489 | MS.gene063077:CDS |
| GATGCTGTATCCATTGCCAC+TGG | 0.580093 | 3.3:-95933665 | MS.gene063077:CDS |
| TGGTTGTTGATTATGTTGTG+GGG | 0.582065 | 3.3:+95933754 | None:intergenic |
| ACTAGTATAGATGCAAGATC+CGG | 0.582105 | 3.3:-95933536 | MS.gene063077:CDS |
| TTTAATCCACCAATGAGCAT+AGG | 0.584506 | 3.3:+95932065 | None:intergenic |
| AATCACTTTCTGTTCAGTCA+AGG | 0.588234 | 3.3:-95932029 | MS.gene063077:CDS |
| GAGTCTGCAAGATCTGGTCC+AGG | 0.588401 | 3.3:-95932496 | MS.gene063077:intron |
| GGTTACAGGAAGGATGCCGC+GGG | 0.590724 | 3.3:-95932140 | MS.gene063077:intron |
| CGAGGAACTTGAAGATGTAG+AGG | 0.592036 | 3.3:-95933573 | MS.gene063077:CDS |
| AAGAAGTGATTCTACAGATG+AGG | 0.593743 | 3.3:+95933886 | None:intergenic |
| GCCTGAGAGACATAGGGCCA+AGG | 0.601892 | 3.3:+95933920 | None:intergenic |
| TTAACAGTTCCACATGGTGG+GGG | 0.603234 | 3.3:-95931524 | MS.gene063077:intron |
| AAGAAGTTGCCGAAGCAACT+GGG | 0.609388 | 3.3:-95931435 | MS.gene063077:CDS |
| TCAGTTGCTAAGAATTATCA+GGG | 0.610615 | 3.3:-95932528 | MS.gene063077:CDS |
| AATCTGAAAACTCACCACCT+TGG | 0.611811 | 3.3:-95933937 | MS.gene063077:CDS |
| GAGTTTGCCTGAGAGACATA+GGG | 0.611941 | 3.3:+95933914 | None:intergenic |
| GGGTTACAGGAAGGATGCCG+CGG | 0.612454 | 3.3:-95932141 | MS.gene063077:intron |
| TCTGGGTTGCAGATGAATTG+TGG | 0.622138 | 3.3:+95934185 | None:intergenic |
| CAAGAGATTGGGGAAATGAT+GGG | 0.622941 | 3.3:-95931060 | MS.gene063077:CDS |
| GATTTGGTATGGATGATGGA+AGG | 0.625281 | 3.3:-95931095 | MS.gene063077:CDS |
| GGATGACTTTAATGATGTCG+AGG | 0.634731 | 3.3:-95933591 | MS.gene063077:CDS |
| TCAATGGGCTACAATGGCAG+GGG | 0.637790 | 3.3:-95932637 | MS.gene063077:CDS |
| TCACATTAGCCCCAACCAAG+AGG | 0.641102 | 3.3:-95933612 | MS.gene063077:CDS |
| GAACAACAACTAGAACTACA+AGG | 0.641229 | 3.3:-95933367 | MS.gene063077:CDS |
| AAAGCGTGTTCGTACACAAG+AGG | 0.653089 | 3.3:-95933420 | MS.gene063077:CDS |
| GGGGTGGAAGGAAGTTGCGG+TGG | 0.664288 | 3.3:+95933734 | None:intergenic |
| GGCAACTTACAAAGTGAAGG+AGG | 0.666025 | 3.3:-95931503 | MS.gene063077:CDS |
| TGAGAGACATAGGGCCAAGG+TGG | 0.668285 | 3.3:+95933923 | None:intergenic |
| CTGCACCTCTTACAAGCCCG+CGG | 0.671463 | 3.3:+95932124 | None:intergenic |
| TTTGGCTTAACAGTTCCACA+TGG | 0.676694 | 3.3:-95931530 | MS.gene063077:intron |
| GTAGCCCATTGAGCAAATGT+GGG | 0.718383 | 3.3:+95932648 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATATAACGATAAATATT+GGG | + | chr3.3:95932124-95932143 | None:intergenic | 15.0% |
| !!! | ATGACAAATTTTAAAACTAT+AGG | - | chr3.3:95932792-95932811 | MS.gene063077:intron | 15.0% |
| !! | ATCAACTGAATTATCAATTT+AGG | - | chr3.3:95932323-95932342 | MS.gene063077:intron | 20.0% |
| !! | GAAAGAATATTAATAGTGAA+AGG | - | chr3.3:95932262-95932281 | MS.gene063077:intron | 20.0% |
| !! | GAAGATATAACGATAAATAT+TGG | + | chr3.3:95932125-95932144 | None:intergenic | 20.0% |
| !! | TGAAAATTTACTTCTCAAAT+GGG | - | chr3.3:95931464-95931483 | MS.gene063077:CDS | 20.0% |
| !!! | AGACTTTTTTGCAATATTTT+TGG | - | chr3.3:95933627-95933646 | MS.gene063077:CDS | 20.0% |
| !!! | ATAATTCAAACGTTTTCTTA+GGG | + | chr3.3:95932576-95932595 | None:intergenic | 20.0% |
| !!! | ATATAATTTGAAATATGCAC+TGG | - | chr3.3:95932766-95932785 | MS.gene063077:intron | 20.0% |
| !!! | ATTTGAGAAGTAAATTTTCA+GGG | + | chr3.3:95931464-95931483 | None:intergenic | 20.0% |
| !!! | TATAATTTGAAATATGCACT+GGG | - | chr3.3:95932767-95932786 | MS.gene063077:intron | 20.0% |
| !!! | TATTCATTTTTCTGATACAT+TGG | - | chr3.3:95933916-95933935 | MS.gene063077:CDS | 20.0% |
| ! | AACACATCTTAAATCAAAAG+AGG | - | chr3.3:95932856-95932875 | MS.gene063077:intron | 25.0% |
| ! | AAGATAAAGATAATACTCAC+TGG | + | chr3.3:95933184-95933203 | None:intergenic | 25.0% |
| ! | AATGAAAATATTTCCATGCA+TGG | + | chr3.3:95933224-95933243 | None:intergenic | 25.0% |
| ! | ATAGTTAAATGGTTGATTAC+TGG | + | chr3.3:95933006-95933025 | None:intergenic | 25.0% |
| ! | CACAAATTTGAACAAGATTA+GGG | + | chr3.3:95933868-95933887 | None:intergenic | 25.0% |
| ! | CTAAGAAAACGTTTGAATTA+TGG | - | chr3.3:95932575-95932594 | MS.gene063077:CDS | 25.0% |
| ! | CTGAAAATTTACTTCTCAAA+TGG | - | chr3.3:95931463-95931482 | MS.gene063077:CDS | 25.0% |
| ! | TCAGAAAAATGAATATCACA+TGG | + | chr3.3:95933911-95933930 | None:intergenic | 25.0% |
| ! | TTCAGAGAACTTAATTTCTT+CGG | + | chr3.3:95931847-95931866 | None:intergenic | 25.0% |
| !! | AAAGCTTGTTTAGAACAATA+TGG | - | chr3.3:95932042-95932061 | MS.gene063077:CDS | 25.0% |
| !! | CAATATTTTGCTAGAAAGTA+CGG | - | chr3.3:95932718-95932737 | MS.gene063077:intron | 25.0% |
| !! | CATAATTCAAACGTTTTCTT+AGG | + | chr3.3:95932577-95932596 | None:intergenic | 25.0% |
| !! | CATTTGAGAAGTAAATTTTC+AGG | + | chr3.3:95931465-95931484 | None:intergenic | 25.0% |
| !! | TATTTTGTCTTCTTCATCAA+CGG | - | chr3.3:95931179-95931198 | MS.gene063077:CDS | 25.0% |
| !! | TTGGCAATTTTCAAATAAAC+AGG | + | chr3.3:95933248-95933267 | None:intergenic | 25.0% |
| !! | TTTCTAGCAAAATATTGTAC+AGG | + | chr3.3:95932715-95932734 | None:intergenic | 25.0% |
| !! | TTTGAGAAGTAAATTTTCAG+GGG | + | chr3.3:95931463-95931482 | None:intergenic | 25.0% |
| !!! | ACCATTTAACTATTTTTCGT+TGG | - | chr3.3:95933013-95933032 | MS.gene063077:intron | 25.0% |
| !!! | AGACTTTTGTTATAAAACCT+AGG | + | chr3.3:95931908-95931927 | None:intergenic | 25.0% |
| !!! | CCATTTAACTATTTTTCGTT+GGG | - | chr3.3:95933014-95933033 | MS.gene063077:intron | 25.0% |
| !!! | TGTCTTGTAATTGTTGTTTT+GGG | + | chr3.3:95931156-95931175 | None:intergenic | 25.0% |
| AAACAGTTGTACAGTGAAAA+TGG | - | chr3.3:95933700-95933719 | MS.gene063077:CDS | 30.0% | |
| ACTATCTATAAAGTGGTACA+CGG | - | chr3.3:95933564-95933583 | MS.gene063077:CDS | 30.0% | |
| ATAACAAAAGTCTACTATCG+CGG | - | chr3.3:95931915-95931934 | MS.gene063077:intron | 30.0% | |
| ATAACTGTTCATTTGATCAC+AGG | - | chr3.3:95932240-95932259 | MS.gene063077:intron | 30.0% | |
| ATCAGTTGCTAAGAATTATC+AGG | - | chr3.3:95932646-95932665 | MS.gene063077:CDS | 30.0% | |
| CATGTTGAATATCACAAGAA+TGG | + | chr3.3:95932946-95932965 | None:intergenic | 30.0% | |
| CATTAAGCAGTTCATGAAAA+AGG | - | chr3.3:95934000-95934019 | MS.gene063077:CDS | 30.0% | |
| CATTCTTGTGATATTCAACA+TGG | - | chr3.3:95932944-95932963 | MS.gene063077:intron | 30.0% | |
| CCCAACGAAAAATAGTTAAA+TGG | + | chr3.3:95933017-95933036 | None:intergenic | 30.0% | |
| CGATAAATATTGGGTGATTT+AGG | + | chr3.3:95932115-95932134 | None:intergenic | 30.0% | |
| GAAGAAATTAAGTTCTCTGA+AGG | - | chr3.3:95931846-95931865 | MS.gene063077:intron | 30.0% | |
| GCACAAATTTGAACAAGATT+AGG | + | chr3.3:95933869-95933888 | None:intergenic | 30.0% | |
| TATGAGGTCCTGAATTATAT+TGG | + | chr3.3:95932459-95932478 | None:intergenic | 30.0% | |
| TCAGTTGCTAAGAATTATCA+GGG | - | chr3.3:95932647-95932666 | MS.gene063077:CDS | 30.0% | |
| TCGTTGAACAATCATCAATT+AGG | - | chr3.3:95933436-95933455 | MS.gene063077:CDS | 30.0% | |
| TGAAGATGTTCCATTATATC+TGG | + | chr3.3:95931546-95931565 | None:intergenic | 30.0% | |
| TTTCAAATTATATCCGTGTG+TGG | + | chr3.3:95932759-95932778 | None:intergenic | 30.0% | |
| ! | AAATTGAGTCATGTGCTTTT+AGG | - | chr3.3:95934161-95934180 | MS.gene063077:CDS | 30.0% |
| ! | CTCTATGAGCTTCTATTTTA+CGG | + | chr3.3:95933296-95933315 | None:intergenic | 30.0% |
| ! | GAGCATCAAATTTGAAATCA+AGG | + | chr3.3:95931209-95931228 | None:intergenic | 30.0% |
| ! | GATTAAATGGAGATTTGGTA+TGG | - | chr3.3:95934069-95934088 | MS.gene063077:intron | 30.0% |
| ! | TGTAACATTCTTTCCTTTTC+TGG | + | chr3.3:95932217-95932236 | None:intergenic | 30.0% |
| !! | ATGTTGGTTCAACAAAAACA+AGG | - | chr3.3:95933360-95933379 | MS.gene063077:CDS | 30.0% |
| !! | TATAAAACCTAGGTTCTAAG+TGG | + | chr3.3:95931898-95931917 | None:intergenic | 30.0% |
| !!! | GTGTCTTGTAATTGTTGTTT+TGG | + | chr3.3:95931157-95931176 | None:intergenic | 30.0% |
| AAAATACTGCTGCAAATGCT+TGG | + | chr3.3:95934209-95934228 | None:intergenic | 35.0% | |
| AAAGCTCGAAAAACTTCAAG+AGG | - | chr3.3:95932478-95932497 | MS.gene063077:intron | 35.0% | |
| AAGAAGTGATTCTACAGATG+AGG | + | chr3.3:95931292-95931311 | None:intergenic | 35.0% | |
| AATCACTTTCTGTTCAGTCA+AGG | - | chr3.3:95933146-95933165 | MS.gene063077:intron | 35.0% | |
| AATTATATTGGCAGGAGAAG+AGG | + | chr3.3:95932447-95932466 | None:intergenic | 35.0% | |
| ACCACTTTATAGATAGTCCA+CGG | + | chr3.3:95933561-95933580 | None:intergenic | 35.0% | |
| ACTAGTATAGATGCAAGATC+CGG | - | chr3.3:95931639-95931658 | MS.gene063077:intron | 35.0% | |
| ATATATCTCAGTGCCAGAAA+AGG | - | chr3.3:95932201-95932220 | MS.gene063077:intron | 35.0% | |
| ATGATTGTTCAACGAGAACA+GGG | + | chr3.3:95933431-95933450 | None:intergenic | 35.0% | |
| ATTAAAGTCATCCTCTTGGT+TGG | + | chr3.3:95931577-95931596 | None:intergenic | 35.0% | |
| CAGGTGATTAAATGGAGATT+TGG | - | chr3.3:95934064-95934083 | MS.gene063077:intron | 35.0% | |
| CATCATTAAAGTCATCCTCT+TGG | + | chr3.3:95931581-95931600 | None:intergenic | 35.0% | |
| CTAAGAATTATCAGGGATCT+GGG | - | chr3.3:95932654-95932673 | MS.gene063077:CDS | 35.0% | |
| CTTGTTCAAATTTGTGCTTC+AGG | - | chr3.3:95933872-95933891 | MS.gene063077:intron | 35.0% | |
| GAACAACAACTAGAACTACA+AGG | - | chr3.3:95931808-95931827 | MS.gene063077:intron | 35.0% | |
| GAGAACTTAATTTCTTCGGA+TGG | + | chr3.3:95931843-95931862 | None:intergenic | 35.0% | |
| GAGAGAAACAGGTGATTAAA+TGG | - | chr3.3:95934056-95934075 | MS.gene063077:intron | 35.0% | |
| GTTGTTCTTAAGTAACGCAA+TGG | + | chr3.3:95931795-95931814 | None:intergenic | 35.0% | |
| TATTTCTTTCTGACCATGCA+TGG | - | chr3.3:95933208-95933227 | MS.gene063077:intron | 35.0% | |
| TGTACAGGTGAAAATATACC+TGG | + | chr3.3:95932700-95932719 | None:intergenic | 35.0% | |
| TTAAAGTCATCCTCTTGGTT+GGG | + | chr3.3:95931576-95931595 | None:intergenic | 35.0% | |
| TTAGTATGAGTCATTGCACT+TGG | - | chr3.3:95932895-95932914 | MS.gene063077:intron | 35.0% | |
| TTCTCCTGCCAATATAATTC+AGG | - | chr3.3:95932448-95932467 | MS.gene063077:intron | 35.0% | |
| TTGTTGAACCAACATCAATC+AGG | + | chr3.3:95933355-95933374 | None:intergenic | 35.0% | |
| TTTAATCCACCAATGAGCAT+AGG | + | chr3.3:95933113-95933132 | None:intergenic | 35.0% | |
| ! | AGAAGTCATTGTTGGAGTTT+TGG | + | chr3.3:95933267-95933286 | None:intergenic | 35.0% |
| ! | AGACTGAAAGTTTAAGACTC+TGG | + | chr3.3:95933843-95933862 | None:intergenic | 35.0% |
| ! | AGAGAAGTATGATGCTTCTA+AGG | - | chr3.3:95933072-95933091 | MS.gene063077:intron | 35.0% |
| ! | GAGAAGTATGATGCTTCTAA+GGG | - | chr3.3:95933073-95933092 | MS.gene063077:intron | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr3.3:95931034-95931053 | None:intergenic | 35.0% |
| ! | GTGGTTGTTGATTATGTTGT+GGG | + | chr3.3:95931425-95931444 | None:intergenic | 35.0% |
| ! | TAAGTTCTCTGAAGGAATAC+AGG | - | chr3.3:95931854-95931873 | MS.gene063077:intron | 35.0% |
| ! | TAGAAAGTACGGACACTAAA+GGG | - | chr3.3:95932729-95932748 | MS.gene063077:intron | 35.0% |
| ! | TCAAGAGCATATGAAGAGAA+TGG | + | chr3.3:95932079-95932098 | None:intergenic | 35.0% |
| ! | TGAGCTTCTATTTTACGGAA+TGG | + | chr3.3:95933291-95933310 | None:intergenic | 35.0% |
| ! | TGGTTGTTGATTATGTTGTG+GGG | + | chr3.3:95931424-95931443 | None:intergenic | 35.0% |
| ! | TTAATCACCTGTTTCTCTCT+AGG | + | chr3.3:95934055-95934074 | None:intergenic | 35.0% |
| !! | AACTTTCTGTTCTAGAGATC+TGG | + | chr3.3:95933812-95933831 | None:intergenic | 35.0% |
| !! | ACTATTTTTCGTTGGGTTAC+AGG | - | chr3.3:95933021-95933040 | MS.gene063077:intron | 35.0% |
| !! | ACTTTCTGTTCTAGAGATCT+GGG | + | chr3.3:95933811-95933830 | None:intergenic | 35.0% |
| !! | AGATCTCTAGAACAGAAAGT+TGG | - | chr3.3:95933811-95933830 | MS.gene063077:CDS | 35.0% |
| !! | GATCTCTAGAACAGAAAGTT+GGG | - | chr3.3:95933812-95933831 | MS.gene063077:CDS | 35.0% |
| !!! | GAAGTTTTTCGAGCTTTATG+AGG | + | chr3.3:95932475-95932494 | None:intergenic | 35.0% |
| !!! | TTCTGGCTTTTCTTTCTGTT+TGG | + | chr3.3:95931668-95931687 | None:intergenic | 35.0% |
| AAGAACTGCAGTCTCAATGT+TGG | + | chr3.3:95931967-95931986 | None:intergenic | 40.0% | |
| AAGAGTCCACACTTCTTCAA+TGG | - | chr3.3:95932978-95932997 | MS.gene063077:intron | 40.0% | |
| AAGTGATTCTACAGATGAGG+AGG | + | chr3.3:95931289-95931308 | None:intergenic | 40.0% | |
| AATCTGAAAACTCACCACCT+TGG | - | chr3.3:95931238-95931257 | MS.gene063077:intron | 40.0% | |
| ACAATCAACGAATGTTGACG+CGG | + | chr3.3:95933511-95933530 | None:intergenic | 40.0% | |
| AGGTCCTGAATTATATTGGC+AGG | + | chr3.3:95932455-95932474 | None:intergenic | 40.0% | |
| AGTTCTCAACCTATGCTCAT+TGG | - | chr3.3:95933101-95933120 | MS.gene063077:intron | 40.0% | |
| ATAAGTACACCAATTCACCG+TGG | - | chr3.3:95933541-95933560 | MS.gene063077:CDS | 40.0% | |
| ATAGATAGTCCACGGTGAAT+TGG | + | chr3.3:95933553-95933572 | None:intergenic | 40.0% | |
| ATGAAGACACTGCAAGAGAT+TGG | - | chr3.3:95934103-95934122 | MS.gene063077:intron | 40.0% | |
| CAAGAGATTGGGGAAATGAT+GGG | - | chr3.3:95934115-95934134 | MS.gene063077:intron | 40.0% | |
| CATGAAAAAGGACCTGGAAA+AGG | - | chr3.3:95934012-95934031 | MS.gene063077:CDS | 40.0% | |
| CTGCTTAATGAGCTGTTCTT+CGG | + | chr3.3:95933990-95934009 | None:intergenic | 40.0% | |
| GACATTGACCTGATTGATGT+TGG | - | chr3.3:95933344-95933363 | MS.gene063077:CDS | 40.0% | |
| GATGATTGTTCAACGAGAAC+AGG | + | chr3.3:95933432-95933451 | None:intergenic | 40.0% | |
| GCTAAGAATTATCAGGGATC+TGG | - | chr3.3:95932653-95932672 | MS.gene063077:CDS | 40.0% | |
| GGAGAAGAGGCAAATGAATT+AGG | + | chr3.3:95932434-95932453 | None:intergenic | 40.0% | |
| GGATGACTTTAATGATGTCG+AGG | - | chr3.3:95931584-95931603 | MS.gene063077:intron | 40.0% | |
| TAAAGTCATCCTCTTGGTTG+GGG | + | chr3.3:95931575-95931594 | None:intergenic | 40.0% | |
| TACCACAATCGTTAGTGTGA+CGG | - | chr3.3:95932012-95932031 | MS.gene063077:intron | 40.0% | |
| TCTCAATCCTAGAGAGAAAC+AGG | - | chr3.3:95934045-95934064 | MS.gene063077:intron | 40.0% | |
| TGAAGACACTGCAAGAGATT+GGG | - | chr3.3:95934104-95934123 | MS.gene063077:intron | 40.0% | |
| TGAAGCTCTTACTCTTGCTA+AGG | - | chr3.3:95931347-95931366 | MS.gene063077:CDS | 40.0% | |
| TGATTGTTCAACGAGAACAG+GGG | + | chr3.3:95933430-95933449 | None:intergenic | 40.0% | |
| TGCATTACCACTTAGAACCT+AGG | - | chr3.3:95931888-95931907 | MS.gene063077:intron | 40.0% | |
| ! | AAAGGACCTGGAAAAGGTAT+TGG | - | chr3.3:95934018-95934037 | MS.gene063077:CDS | 40.0% |
| ! | ACCGTGGACTATCTATAAAG+TGG | - | chr3.3:95933557-95933576 | MS.gene063077:CDS | 40.0% |
| ! | AGAAAGTACGGACACTAAAG+GGG | - | chr3.3:95932730-95932749 | MS.gene063077:intron | 40.0% |
| ! | CTAGAAAGTACGGACACTAA+AGG | - | chr3.3:95932728-95932747 | MS.gene063077:intron | 40.0% |
| ! | GGTGGTTGTTGATTATGTTG+TGG | + | chr3.3:95931426-95931445 | None:intergenic | 40.0% |
| ! | GGTTGTTGATTATGTTGTGG+GGG | + | chr3.3:95931423-95931442 | None:intergenic | 40.0% |
| ! | GTTGTTGATTATGTTGTGGG+GGG | + | chr3.3:95931422-95931441 | None:intergenic | 40.0% |
| ! | TCTCAAATGGGTTCAACACA+TGG | - | chr3.3:95931476-95931495 | MS.gene063077:CDS | 40.0% |
| ! | TGGAGATTTGGTATGGATGA+TGG | - | chr3.3:95934076-95934095 | MS.gene063077:intron | 40.0% |
| ! | TGGCTTTTCTTTCTGTTTGG+CGG | + | chr3.3:95931665-95931684 | None:intergenic | 40.0% |
| ! | TTGTTGATTATGTTGTGGGG+GGG | + | chr3.3:95931421-95931440 | None:intergenic | 40.0% |
| ! | TTTGGCTTAACAGTTCCACA+TGG | - | chr3.3:95933645-95933664 | MS.gene063077:CDS | 40.0% |
| ! | TTTTTCGTTGGGTTACAGGA+AGG | - | chr3.3:95933025-95933044 | MS.gene063077:intron | 40.0% |
| !! | AGTAAATTTTCAGGGGTGGA+AGG | + | chr3.3:95931456-95931475 | None:intergenic | 40.0% |
| !! | ATTTGCTCAATGGGCTACAA+TGG | - | chr3.3:95932532-95932551 | MS.gene063077:CDS | 40.0% |
| !! | GAGAAGTAAATTTTCAGGGG+TGG | + | chr3.3:95931460-95931479 | None:intergenic | 40.0% |
| !! | GATGATGATGATGATGATGG+CGG | + | chr3.3:95931031-95931050 | None:intergenic | 40.0% |
| !! | GATTTGGTATGGATGATGGA+AGG | - | chr3.3:95934080-95934099 | MS.gene063077:intron | 40.0% |
| !! | GGAAATGATGGGTGTAAGTA+GGG | - | chr3.3:95934126-95934145 | MS.gene063077:CDS | 40.0% |
| !! | TGCTCATTGGTGGATTAAAC+AGG | - | chr3.3:95933114-95933133 | MS.gene063077:intron | 40.0% |
| AAAGCGTGTTCGTACACAAG+AGG | - | chr3.3:95931755-95931774 | MS.gene063077:intron | 45.0% | |
| AACATCGTCTCCTTCAAGTC+TGG | - | chr3.3:95931717-95931736 | MS.gene063077:intron | 45.0% | |
| AAGAAGTTGCCGAAGCAACT+GGG | - | chr3.3:95933740-95933759 | MS.gene063077:CDS | 45.0% | |
| ACCAGCAGGACCAGATATAA+TGG | - | chr3.3:95931533-95931552 | MS.gene063077:intron | 45.0% | |
| CGAGGAACTTGAAGATGTAG+AGG | - | chr3.3:95931602-95931621 | MS.gene063077:intron | 45.0% | |
| CTGGAACCATTGAAGAAGTG+TGG | + | chr3.3:95932987-95933006 | None:intergenic | 45.0% | |
| CTTAACAGTTCCACATGGTG+GGG | - | chr3.3:95933650-95933669 | MS.gene063077:CDS | 45.0% | |
| CTTGAAGGAGACGATGTTTG+TGG | + | chr3.3:95931715-95931734 | None:intergenic | 45.0% | |
| GAAGACACTGCAAGAGATTG+GGG | - | chr3.3:95934105-95934124 | MS.gene063077:intron | 45.0% | |
| GACCTTGCAGAAAAATGTGG+CGG | - | chr3.3:95932500-95932519 | MS.gene063077:CDS | 45.0% | |
| GAGGACCTTGCAGAAAAATG+TGG | - | chr3.3:95932497-95932516 | MS.gene063077:CDS | 45.0% | |
| GAGTTTGCCTGAGAGACATA+GGG | + | chr3.3:95931264-95931283 | None:intergenic | 45.0% | |
| GATTGTTCAACGAGAACAGG+GGG | + | chr3.3:95933429-95933448 | None:intergenic | 45.0% | |
| GCAAGAGATTGGGGAAATGA+TGG | - | chr3.3:95934114-95934133 | MS.gene063077:intron | 45.0% | |
| GCAGTTCATGAAAAAGGACC+TGG | - | chr3.3:95934006-95934025 | MS.gene063077:CDS | 45.0% | |
| GCTTAACAGTTCCACATGGT+GGG | - | chr3.3:95933649-95933668 | MS.gene063077:CDS | 45.0% | |
| GGAATGGCAGAAGTCATTGT+TGG | + | chr3.3:95933275-95933294 | None:intergenic | 45.0% | |
| GGCAACTTACAAAGTGAAGG+AGG | - | chr3.3:95933672-95933691 | MS.gene063077:CDS | 45.0% | |
| GGCAATGGATACAGCATCTT+CGG | + | chr3.3:95931508-95931527 | None:intergenic | 45.0% | |
| GTAGCCCATTGAGCAAATGT+GGG | + | chr3.3:95932530-95932549 | None:intergenic | 45.0% | |
| TCCATTATATCTGGTCCTGC+TGG | + | chr3.3:95931537-95931556 | None:intergenic | 45.0% | |
| TCTCAACCTATGCTCATTGG+TGG | - | chr3.3:95933104-95933123 | MS.gene063077:intron | 45.0% | |
| TCTGGGTTGCAGATGAATTG+TGG | + | chr3.3:95930993-95931012 | None:intergenic | 45.0% | |
| TGATTCTACAGATGAGGAGG+AGG | + | chr3.3:95931286-95931305 | None:intergenic | 45.0% | |
| TGTAGCCCATTGAGCAAATG+TGG | + | chr3.3:95932531-95932550 | None:intergenic | 45.0% | |
| TTAACAGTTCCACATGGTGG+GGG | - | chr3.3:95933651-95933670 | MS.gene063077:CDS | 45.0% | |
| ! | AGACCATGAGCTTCTTTTGG+GGG | - | chr3.3:95933485-95933504 | MS.gene063077:CDS | 45.0% |
| ! | AGGAGACCATGAGCTTCTTT+TGG | - | chr3.3:95933482-95933501 | MS.gene063077:CDS | 45.0% |
| ! | CTAGAGATCTGGGAGCTTTT+GGG | + | chr3.3:95933801-95933820 | None:intergenic | 45.0% |
| ! | GAAAGTACGGACACTAAAGG+GGG | - | chr3.3:95932731-95932750 | MS.gene063077:intron | 45.0% |
| ! | GACTGTCCAATACCTTTTCC+AGG | + | chr3.3:95934027-95934046 | None:intergenic | 45.0% |
| ! | GAGACCATGAGCTTCTTTTG+GGG | - | chr3.3:95933484-95933503 | MS.gene063077:CDS | 45.0% |
| ! | GAGTTTTCAGATTCAGCAGG+AGG | + | chr3.3:95931231-95931250 | None:intergenic | 45.0% |
| ! | GGAGACCATGAGCTTCTTTT+GGG | - | chr3.3:95933483-95933502 | MS.gene063077:CDS | 45.0% |
| ! | GGTGAGTTTTCAGATTCAGC+AGG | + | chr3.3:95931234-95931253 | None:intergenic | 45.0% |
| ! | TAGAGATCTGGGAGCTTTTG+GGG | + | chr3.3:95933800-95933819 | None:intergenic | 45.0% |
| ! | TCTAGAGATCTGGGAGCTTT+TGG | + | chr3.3:95933802-95933821 | None:intergenic | 45.0% |
| ! | TGTTGATTATGTTGTGGGGG+GGG | + | chr3.3:95931420-95931439 | None:intergenic | 45.0% |
| ! | TTTTCTTTCTGTTTGGCGGC+CGG | + | chr3.3:95931661-95931680 | None:intergenic | 45.0% |
| !! | ATGATGATGATGATGGCGGT+GGG | + | chr3.3:95931027-95931046 | None:intergenic | 45.0% |
| !! | GGGAAATGATGGGTGTAAGT+AGG | - | chr3.3:95934125-95934144 | MS.gene063077:intron | 45.0% |
| !! | GGTGGATTAAACAGGCAGTT+CGG | - | chr3.3:95933122-95933141 | MS.gene063077:intron | 45.0% |
| !!! | TGTACGAACACGCTTTTTCC+TGG | + | chr3.3:95931751-95931770 | None:intergenic | 45.0% |
| AATGAGGATGAGGAGGACTG+CGG | + | chr3.3:95933319-95933338 | None:intergenic | 50.0% | |
| AGGTCAATGTCCCACCAATG+AGG | + | chr3.3:95933335-95933354 | None:intergenic | 50.0% | |
| AGTCTACTATCGCGGCATCA+TGG | - | chr3.3:95931923-95931942 | MS.gene063077:intron | 50.0% | |
| ATGTCCCACCAATGAGGATG+AGG | + | chr3.3:95933329-95933348 | None:intergenic | 50.0% | |
| ATTGGTGTGCGTTTCTGACC+AGG | - | chr3.3:95933934-95933953 | MS.gene063077:CDS | 50.0% | |
| CAGGATCAGCAAGTACTTCC+TGG | + | chr3.3:95933955-95933974 | None:intergenic | 50.0% | |
| CCAGAAGAGTCAGAGCTTCT+GGG | - | chr3.3:95931682-95931701 | MS.gene063077:intron | 50.0% | |
| CCAGCCCACATTTGCTCAAT+GGG | - | chr3.3:95932523-95932542 | MS.gene063077:CDS | 50.0% | |
| GAAGAAGTTGCCGAAGCAAC+TGG | - | chr3.3:95933739-95933758 | MS.gene063077:CDS | 50.0% | |
| GATGCTGTATCCATTGCCAC+TGG | - | chr3.3:95931510-95931529 | MS.gene063077:CDS | 50.0% | |
| GGAGTTTGCCTGAGAGACAT+AGG | + | chr3.3:95931265-95931284 | None:intergenic | 50.0% | |
| GGCTTAACAGTTCCACATGG+TGG | - | chr3.3:95933648-95933667 | MS.gene063077:CDS | 50.0% | |
| GGGGGCAACTTACAAAGTGA+AGG | - | chr3.3:95933669-95933688 | MS.gene063077:CDS | 50.0% | |
| TCACATTAGCCCCAACCAAG+AGG | - | chr3.3:95931563-95931582 | MS.gene063077:intron | 50.0% | |
| TCCTCCTCATCCTCATTGGT+GGG | - | chr3.3:95933322-95933341 | MS.gene063077:CDS | 50.0% | |
| TCGGCAACTTCTTCATCGTC+AGG | + | chr3.3:95933733-95933752 | None:intergenic | 50.0% | |
| TGCCGTCACACTAACGATTG+TGG | + | chr3.3:95932017-95932036 | None:intergenic | 50.0% | |
| TGGGATGAGTCTGCAAGATC+TGG | - | chr3.3:95932673-95932692 | MS.gene063077:CDS | 50.0% | |
| ! | AAGAGTCAGAGCTTCTGGGA+AGG | - | chr3.3:95931686-95931705 | MS.gene063077:intron | 50.0% |
| ! | TCTTCGGCTGTTTCAGCTTC+AGG | + | chr3.3:95933974-95933993 | None:intergenic | 50.0% |
| !! | CTCAATGGGCTACAATGGCA+GGG | - | chr3.3:95932537-95932556 | MS.gene063077:CDS | 50.0% |
| !! | GATGATGATGATGATGGCGG+TGG | + | chr3.3:95931028-95931047 | None:intergenic | 50.0% |
| !! | TCAATGGGCTACAATGGCAG+GGG | - | chr3.3:95932538-95932557 | MS.gene063077:CDS | 50.0% |
| !!! | AACACGCTTTTTCCTGGTGG+TGG | + | chr3.3:95931745-95931764 | None:intergenic | 50.0% |
| !!! | ACGAACACGCTTTTTCCTGG+TGG | + | chr3.3:95931748-95931767 | None:intergenic | 50.0% |
| !!! | TGGGAGCTTTTGGGGTCAAA+AGG | + | chr3.3:95933792-95933811 | None:intergenic | 50.0% |
| ACCTTGGCCCTATGTCTCTC+AGG | - | chr3.3:95931254-95931273 | MS.gene063077:intron | 55.0% | |
| AGGTCACCATCTCAGTCGTG+CGG | - | chr3.3:95933456-95933475 | MS.gene063077:CDS | 55.0% | |
| CAACTGGGCTGTCGATGAAG+AGG | - | chr3.3:95933755-95933774 | MS.gene063077:CDS | 55.0% | |
| CATCGACAGCCCAGTTGCTT+CGG | + | chr3.3:95933752-95933771 | None:intergenic | 55.0% | |
| CCCATTGAGCAAATGTGGGC+TGG | + | chr3.3:95932526-95932545 | None:intergenic | 55.0% | |
| GAGTCTGCAAGATCTGGTCC+AGG | - | chr3.3:95932679-95932698 | MS.gene063077:CDS | 55.0% | |
| GCAGTCCTCCTCATCCTCAT+TGG | - | chr3.3:95933318-95933337 | MS.gene063077:intron | 55.0% | |
| GCCAGAAGAGTCAGAGCTTC+TGG | - | chr3.3:95931681-95931700 | MS.gene063077:intron | 55.0% | |
| GCCAGCCCACATTTGCTCAA+TGG | - | chr3.3:95932522-95932541 | MS.gene063077:CDS | 55.0% | |
| GGCTGCTGCAAAGCTTGCAA+AGG | - | chr3.3:95931368-95931387 | MS.gene063077:CDS | 55.0% | |
| GGTGGGTAGGGATTCTGTCT+GGG | + | chr3.3:95931010-95931029 | None:intergenic | 55.0% | |
| GTCCTCCTCATCCTCATTGG+TGG | - | chr3.3:95933321-95933340 | MS.gene063077:intron | 55.0% | |
| TCAGGGGTGGAAGGAAGTTG+CGG | + | chr3.3:95931447-95931466 | None:intergenic | 55.0% | |
| TCCCACCAATGAGGATGAGG+AGG | + | chr3.3:95933326-95933345 | None:intergenic | 55.0% | |
| TGAGAGACATAGGGCCAAGG+TGG | + | chr3.3:95931255-95931274 | None:intergenic | 55.0% | |
| TGTAAGTTGCCCCCACCATG+TGG | + | chr3.3:95933663-95933682 | None:intergenic | 55.0% | |
| ! | CCCAGAAGCTCTGACTCTTC+TGG | + | chr3.3:95931685-95931704 | None:intergenic | 55.0% |
| ! | GGCCGCCACATTTTTCTGCA+AGG | + | chr3.3:95932505-95932524 | None:intergenic | 55.0% |
| ! | TCAAGTCTGGTTCCACCACC+AGG | - | chr3.3:95931730-95931749 | MS.gene063077:intron | 55.0% |
| !! | ACTAAAGGGGGCACCACACA+CGG | - | chr3.3:95932743-95932762 | MS.gene063077:intron | 55.0% |
| !! | GATGATGATGGCGGTGGGTA+GGG | + | chr3.3:95931022-95931041 | None:intergenic | 55.0% |
| !! | GCTCAATGGGCTACAATGGC+AGG | - | chr3.3:95932536-95932555 | MS.gene063077:CDS | 55.0% |
| !! | GGTGGTGGAACCAGACTTGA+AGG | + | chr3.3:95931730-95931749 | None:intergenic | 55.0% |
| !! | TGATGATGATGGCGGTGGGT+AGG | + | chr3.3:95931023-95931042 | None:intergenic | 55.0% |
| ATCTGGTCCTGCTGGTCCAG+TGG | + | chr3.3:95931529-95931548 | None:intergenic | 60.0% | |
| CCATCTCAGTCGTGCGGATG+AGG | - | chr3.3:95933462-95933481 | MS.gene063077:CDS | 60.0% | |
| CCTCATCCGCACGACTGAGA+TGG | + | chr3.3:95933465-95933484 | None:intergenic | 60.0% | |
| CGGCCCCCAAAAGAAGCTCA+TGG | + | chr3.3:95933491-95933510 | None:intergenic | 60.0% | |
| CGGTGGGTAGGGATTCTGTC+TGG | + | chr3.3:95931011-95931030 | None:intergenic | 60.0% | |
| CTGCACCTCTTACAAGCCCG+CGG | + | chr3.3:95933054-95933073 | None:intergenic | 60.0% | |
| GCCTGAGAGACATAGGGCCA+AGG | + | chr3.3:95931258-95931277 | None:intergenic | 60.0% | |
| GGGTTACAGGAAGGATGCCG+CGG | - | chr3.3:95933034-95933053 | MS.gene063077:intron | 60.0% | |
| GGTTACAGGAAGGATGCCGC+GGG | - | chr3.3:95933035-95933054 | MS.gene063077:intron | 60.0% | |
| TCCATTGCCACTGGACCAGC+AGG | - | chr3.3:95931519-95931538 | MS.gene063077:CDS | 60.0% | |
| TCCTGCTGGTCCAGTGGCAA+TGG | + | chr3.3:95931523-95931542 | None:intergenic | 60.0% | |
| GGATGCCGCGGGCTTGTAAG+AGG | - | chr3.3:95933046-95933065 | MS.gene063077:intron | 65.0% | |
| GGGGTGGAAGGAAGTTGCGG+TGG | + | chr3.3:95931444-95931463 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 95930960 | 95934237 | 95930960 | ID=MS.gene063077 |
| chr3.3 | mRNA | 95930960 | 95934237 | 95930960 | ID=MS.gene063077.t1;Parent=MS.gene063077 |
| chr3.3 | exon | 95934126 | 95934237 | 95934126 | ID=MS.gene063077.t1.exon1;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95934126 | 95934237 | 95934126 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95933882 | 95934046 | 95933882 | ID=MS.gene063077.t1.exon2;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95933882 | 95934046 | 95933882 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95933322 | 95933845 | 95933322 | ID=MS.gene063077.t1.exon3;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95933322 | 95933845 | 95933322 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95932497 | 95932727 | 95932497 | ID=MS.gene063077.t1.exon4;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95932497 | 95932727 | 95932497 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95932014 | 95932154 | 95932014 | ID=MS.gene063077.t1.exon5;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95932014 | 95932154 | 95932014 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95931339 | 95931539 | 95931339 | ID=MS.gene063077.t1.exon6;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95931339 | 95931539 | 95931339 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| chr3.3 | exon | 95930960 | 95931241 | 95930960 | ID=MS.gene063077.t1.exon7;Parent=MS.gene063077.t1 |
| chr3.3 | CDS | 95930960 | 95931241 | 95930960 | ID=cds.MS.gene063077.t1;Parent=MS.gene063077.t1 |
| Gene Sequence |
| Protein sequence |
