Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26340.t1 | XP_013457004.1 | 94.7 | 304 | 15 | 1 | 1 | 304 | 1 | 303 | 2.10E-143 | 518.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26340.t1 | Q9ST69 | 66.8 | 295 | 78 | 4 | 30 | 304 | 14 | 308 | 1.8e-98 | 360.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26340.t1 | A0A072UYV0 | 94.7 | 304 | 15 | 1 | 1 | 304 | 1 | 303 | 1.5e-143 | 518.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene26340 | 0.863885 | 1.81E-64 | -1.69E-46 |
| MS.gene049171 | MS.gene26340 | 0.807699 | 4.45E-50 | -1.69E-46 |
| MS.gene049173 | MS.gene26340 | 0.812584 | 3.94E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene26340 | 0.866197 | 3.40E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene26340 | 0.832182 | 1.09E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene26340 | 0.830013 | 3.73E-55 | -1.69E-46 |
| MS.gene049320 | MS.gene26340 | 0.81179 | 5.87E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene26340 | 0.858481 | 8.00E-63 | -1.69E-46 |
| MS.gene049427 | MS.gene26340 | 0.884858 | 1.34E-71 | -1.69E-46 |
| MS.gene049491 | MS.gene26340 | 0.850382 | 1.76E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene26340 | 0.831059 | 2.07E-55 | -1.69E-46 |
| MS.gene049614 | MS.gene26340 | 0.854493 | 1.19E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene26340 | 0.843947 | 1.02E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene26340 | 0.828926 | 6.85E-55 | -1.69E-46 |
| MS.gene049760 | MS.gene26340 | 0.850428 | 1.71E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene26340 | 0.86551 | 5.60E-65 | -1.69E-46 |
| MS.gene050076 | MS.gene26340 | 0.873244 | 1.71E-67 | -1.69E-46 |
| MS.gene050099 | MS.gene26340 | 0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene26340 | 0.867991 | 9.09E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene26340 | 0.83583 | 1.34E-56 | -1.69E-46 |
| MS.gene050231 | MS.gene26340 | 0.802933 | 4.43E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene26340 | 0.851698 | 7.49E-61 | -1.69E-46 |
| MS.gene050333 | MS.gene26340 | 0.84441 | 7.69E-59 | -1.69E-46 |
| MS.gene050353 | MS.gene26340 | -0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene26340 | 0.84978 | 2.60E-60 | -1.69E-46 |
| MS.gene050475 | MS.gene26340 | -0.846262 | 2.43E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene26340 | 0.813434 | 2.56E-51 | -1.69E-46 |
| MS.gene05053 | MS.gene26340 | 0.819627 | 1.05E-52 | -1.69E-46 |
| MS.gene050541 | MS.gene26340 | -0.844133 | 9.13E-59 | -1.69E-46 |
| MS.gene050593 | MS.gene26340 | 0.839602 | 1.44E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene26340 | 0.833974 | 3.92E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene26340 | 0.805737 | 1.16E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene26340 | 0.811264 | 7.64E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene26340 | 0.822019 | 2.96E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene26340 | 0.91083 | 1.21E-82 | -1.69E-46 |
| MS.gene050770 | MS.gene26340 | 0.911935 | 3.46E-83 | -1.69E-46 |
| MS.gene050772 | MS.gene26340 | 0.85101 | 1.17E-60 | -1.69E-46 |
| MS.gene050781 | MS.gene26340 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene050783 | MS.gene26340 | 0.868078 | 8.53E-66 | -1.69E-46 |
| MS.gene050812 | MS.gene26340 | 0.827252 | 1.73E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene26340 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene05100 | MS.gene26340 | 0.866423 | 2.88E-65 | -1.69E-46 |
| MS.gene05101 | MS.gene26340 | 0.895417 | 9.78E-76 | -1.69E-46 |
| MS.gene05105 | MS.gene26340 | 0.861092 | 1.31E-63 | -1.69E-46 |
| MS.gene051228 | MS.gene26340 | 0.823686 | 1.21E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene26340 | 0.870164 | 1.79E-66 | -1.69E-46 |
| MS.gene051471 | MS.gene26340 | 0.848315 | 6.63E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene26340 | 0.810016 | 1.42E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene26340 | 0.869423 | 3.13E-66 | -1.69E-46 |
| MS.gene051692 | MS.gene26340 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene26340 | 0.844577 | 6.94E-59 | -1.69E-46 |
| MS.gene051810 | MS.gene26340 | 0.817016 | 4.10E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene26340 | 0.838001 | 3.73E-57 | -1.69E-46 |
| MS.gene051877 | MS.gene26340 | 0.831673 | 1.46E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene26340 | 0.866457 | 2.81E-65 | -1.69E-46 |
| MS.gene052188 | MS.gene26340 | 0.824975 | 6.03E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene26340 | 0.892921 | 1.02E-74 | -1.69E-46 |
| MS.gene052290 | MS.gene26340 | 0.867241 | 1.58E-65 | -1.69E-46 |
| MS.gene052293 | MS.gene26340 | 0.805161 | 1.53E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene26340 | 0.867084 | 1.78E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene26340 | 0.84562 | 3.63E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene26340 | 0.874435 | 6.77E-68 | -1.69E-46 |
| MS.gene052379 | MS.gene26340 | 0.868562 | 5.96E-66 | -1.69E-46 |
| MS.gene052421 | MS.gene26340 | 0.863255 | 2.84E-64 | -1.69E-46 |
| MS.gene052481 | MS.gene26340 | 0.828865 | 7.09E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene26340 | 0.839705 | 1.35E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene26340 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene26340 | 0.835895 | 1.29E-56 | -1.69E-46 |
| MS.gene052670 | MS.gene26340 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene26340 | 0.887332 | 1.57E-72 | -1.69E-46 |
| MS.gene053103 | MS.gene26340 | 0.853058 | 3.07E-61 | -1.69E-46 |
| MS.gene053104 | MS.gene26340 | 0.828171 | 1.04E-54 | -1.69E-46 |
| MS.gene053107 | MS.gene26340 | 0.812239 | 4.69E-51 | -1.69E-46 |
| MS.gene053207 | MS.gene26340 | 0.844242 | 8.54E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene26340 | 0.820335 | 7.24E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene26340 | 0.852952 | 3.29E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene26340 | 0.83885 | 2.25E-57 | -1.69E-46 |
| MS.gene053322 | MS.gene26340 | 0.922812 | 6.04E-89 | -1.69E-46 |
| MS.gene053574 | MS.gene26340 | 0.806814 | 6.85E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene26340 | 0.86339 | 2.58E-64 | -1.69E-46 |
| MS.gene053813 | MS.gene26340 | 0.844413 | 7.68E-59 | -1.69E-46 |
| MS.gene053915 | MS.gene26340 | 0.836005 | 1.21E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene26340 | 0.848829 | 4.78E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene26340 | 0.909393 | 5.98E-82 | -1.69E-46 |
| MS.gene05455 | MS.gene26340 | 0.826162 | 3.16E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene26340 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene26340 | 0.821497 | 3.91E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene26340 | 0.84478 | 6.12E-59 | -1.69E-46 |
| MS.gene054802 | MS.gene26340 | 0.91266 | 1.51E-83 | -1.69E-46 |
| MS.gene054803 | MS.gene26340 | 0.911291 | 7.18E-83 | -1.69E-46 |
| MS.gene054804 | MS.gene26340 | 0.915439 | 5.88E-85 | -1.69E-46 |
| MS.gene054927 | MS.gene26340 | 0.815606 | 8.48E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene26340 | 0.850423 | 1.71E-60 | -1.69E-46 |
| MS.gene055116 | MS.gene26340 | 0.820726 | 5.89E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene26340 | 0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene26340 | 0.862895 | 3.67E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene26340 | 0.845557 | 3.77E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene26340 | 0.817478 | 3.23E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene26340 | 0.821219 | 4.54E-53 | -1.69E-46 |
| MS.gene055397 | MS.gene26340 | 0.902106 | 1.36E-78 | -1.69E-46 |
| MS.gene055412 | MS.gene26340 | 0.881224 | 2.87E-70 | -1.69E-46 |
| MS.gene055422 | MS.gene26340 | 0.841808 | 3.79E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene26340 | 0.830794 | 2.40E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene26340 | 0.915781 | 3.91E-85 | -1.69E-46 |
| MS.gene055502 | MS.gene26340 | 0.816839 | 4.50E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene26340 | 0.84 | 1.13E-57 | -1.69E-46 |
| MS.gene055638 | MS.gene26340 | 0.829197 | 5.89E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene26340 | 0.89424 | 2.97E-75 | -1.69E-46 |
| MS.gene055722 | MS.gene26340 | 0.841909 | 3.57E-58 | -1.69E-46 |
| MS.gene055802 | MS.gene26340 | 0.800934 | 1.14E-48 | -1.69E-46 |
| MS.gene055896 | MS.gene26340 | 0.824465 | 7.96E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene26340 | 0.859141 | 5.08E-63 | -1.69E-46 |
| MS.gene055930 | MS.gene26340 | 0.814784 | 1.29E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene26340 | 0.824516 | 7.74E-54 | -1.69E-46 |
| MS.gene05602 | MS.gene26340 | 0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene26340 | 0.860045 | 2.71E-63 | -1.69E-46 |
| MS.gene056191 | MS.gene26340 | 0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene26340 | 0.844027 | 9.75E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene26340 | 0.847132 | 1.40E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene26340 | 0.840389 | 8.96E-58 | -1.69E-46 |
| MS.gene056449 | MS.gene26340 | 0.823626 | 1.25E-53 | -1.69E-46 |
| MS.gene056452 | MS.gene26340 | 0.829171 | 5.98E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene26340 | 0.803657 | 3.14E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene26340 | 0.848626 | 5.44E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene26340 | 0.824999 | 5.95E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene26340 | 0.820448 | 6.82E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene26340 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene056933 | MS.gene26340 | 0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene056935 | MS.gene26340 | 0.804335 | 2.27E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene26340 | 0.809237 | 2.09E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene26340 | 0.883381 | 4.71E-71 | -1.69E-46 |
| MS.gene05702 | MS.gene26340 | 0.819057 | 1.42E-52 | -1.69E-46 |
| MS.gene057123 | MS.gene26340 | 0.87406 | 9.07E-68 | -1.69E-46 |
| MS.gene057129 | MS.gene26340 | 0.912833 | 1.24E-83 | -1.69E-46 |
| MS.gene057146 | MS.gene26340 | 0.90151 | 2.49E-78 | -1.69E-46 |
| MS.gene057285 | MS.gene26340 | 0.819929 | 8.97E-53 | -1.69E-46 |
| MS.gene057295 | MS.gene26340 | 0.862389 | 5.25E-64 | -1.69E-46 |
| MS.gene057331 | MS.gene26340 | 0.828914 | 6.90E-55 | -1.69E-46 |
| MS.gene05733 | MS.gene26340 | 0.809542 | 1.80E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene26340 | 0.898413 | 5.44E-77 | -1.69E-46 |
| MS.gene057749 | MS.gene26340 | 0.807692 | 4.47E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene26340 | 0.811729 | 6.05E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene26340 | 0.802375 | 5.78E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene26340 | 0.800529 | 1.38E-48 | -1.69E-46 |
| MS.gene058019 | MS.gene26340 | 0.887366 | 1.52E-72 | -1.69E-46 |
| MS.gene058082 | MS.gene26340 | 0.807322 | 5.35E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene26340 | 0.826382 | 2.80E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene26340 | 0.894004 | 3.71E-75 | -1.69E-46 |
| MS.gene058323 | MS.gene26340 | 0.824408 | 8.20E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene26340 | 0.841857 | 3.69E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene26340 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene26340 | 0.911199 | 7.96E-83 | -1.69E-46 |
| MS.gene058723 | MS.gene26340 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene26340 | 0.812073 | 5.09E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene26340 | 0.800969 | 1.12E-48 | -1.69E-46 |
| MS.gene05883 | MS.gene26340 | 0.834031 | 3.79E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene26340 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene058903 | MS.gene26340 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene26340 | 0.80881 | 2.58E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene26340 | 0.862969 | 3.48E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene26340 | 0.853082 | 3.02E-61 | -1.69E-46 |
| MS.gene05907 | MS.gene26340 | 0.819972 | 8.77E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene26340 | 0.807233 | 5.59E-50 | -1.69E-46 |
| MS.gene059326 | MS.gene26340 | 0.835929 | 1.26E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene26340 | 0.831129 | 1.99E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene26340 | 0.898374 | 5.65E-77 | -1.69E-46 |
| MS.gene059597 | MS.gene26340 | 0.847832 | 9.01E-60 | -1.69E-46 |
| MS.gene05959 | MS.gene26340 | 0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene26340 | 0.880219 | 6.57E-70 | -1.69E-46 |
| MS.gene059677 | MS.gene26340 | 0.828124 | 1.07E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene26340 | 0.868783 | 5.05E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene26340 | 0.869063 | 4.10E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene26340 | 0.873056 | 1.98E-67 | -1.69E-46 |
| MS.gene059711 | MS.gene26340 | 0.838758 | 2.38E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene26340 | 0.842813 | 2.06E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene26340 | 0.804507 | 2.09E-49 | -1.69E-46 |
| MS.gene059858 | MS.gene26340 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene05986 | MS.gene26340 | 0.808379 | 3.19E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene26340 | 0.839195 | 1.83E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene26340 | 0.929601 | 5.50E-93 | -1.69E-46 |
| MS.gene059974 | MS.gene26340 | 0.804446 | 2.15E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene26340 | 0.809408 | 1.92E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene26340 | 0.824399 | 8.24E-54 | -1.69E-46 |
| MS.gene060356 | MS.gene26340 | 0.841094 | 5.85E-58 | -1.69E-46 |
| MS.gene06037 | MS.gene26340 | 0.80249 | 5.47E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene26340 | 0.819986 | 8.71E-53 | -1.69E-46 |
| MS.gene060559 | MS.gene26340 | 0.801913 | 7.20E-49 | -1.69E-46 |
| MS.gene060675 | MS.gene26340 | 0.822252 | 2.62E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene26340 | 0.843943 | 1.03E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene26340 | 0.854826 | 9.50E-62 | -1.69E-46 |
| MS.gene060837 | MS.gene26340 | 0.811065 | 8.43E-51 | -1.69E-46 |
| MS.gene06090 | MS.gene26340 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene26340 | 0.836704 | 8.01E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene26340 | 0.826161 | 3.16E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene26340 | 0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene26340 | -0.820262 | 7.53E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene26340 | 0.81159 | 6.49E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene26340 | 0.858659 | 7.08E-63 | -1.69E-46 |
| MS.gene061171 | MS.gene26340 | 0.864155 | 1.49E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene26340 | 0.937415 | 3.60E-98 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26340.t1 | MTR_4g088615 | 96.711 | 304 | 9 | 1 | 1 | 304 | 1 | 303 | 0.0 | 595 |
| MS.gene26340.t1 | MTR_4g088615 | 95.928 | 221 | 8 | 1 | 1 | 221 | 1 | 220 | 3.08e-153 | 429 |
| MS.gene26340.t1 | MTR_8g105340 | 32.727 | 165 | 94 | 4 | 148 | 304 | 82 | 237 | 3.48e-16 | 77.4 |
| MS.gene26340.t1 | MTR_8g105340 | 32.727 | 165 | 94 | 4 | 148 | 304 | 91 | 246 | 3.91e-16 | 77.4 |
| MS.gene26340.t1 | MTR_1g032450 | 32.727 | 165 | 94 | 4 | 148 | 304 | 89 | 244 | 4.68e-16 | 77.0 |
| MS.gene26340.t1 | MTR_8g093680 | 30.065 | 153 | 107 | 0 | 144 | 296 | 341 | 493 | 1.20e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26340.t1 | AT2G33800 | 71.321 | 265 | 68 | 3 | 45 | 304 | 42 | 303 | 2.22e-130 | 373 |
| MS.gene26340.t1 | AT1G64880 | 33.553 | 152 | 101 | 0 | 145 | 296 | 355 | 506 | 1.60e-18 | 86.3 |
| MS.gene26340.t1 | AT2G41840 | 31.515 | 165 | 96 | 3 | 148 | 304 | 96 | 251 | 6.20e-16 | 77.0 |
| MS.gene26340.t1 | AT1G58380 | 31.515 | 165 | 96 | 3 | 148 | 304 | 95 | 250 | 6.62e-16 | 76.6 |
| MS.gene26340.t1 | AT1G58684 | 31.515 | 165 | 96 | 3 | 148 | 304 | 95 | 250 | 9.59e-16 | 76.3 |
| MS.gene26340.t1 | AT1G58983 | 31.515 | 165 | 96 | 3 | 148 | 304 | 95 | 250 | 9.59e-16 | 76.3 |
| MS.gene26340.t1 | AT1G59359 | 31.515 | 165 | 96 | 3 | 148 | 304 | 95 | 250 | 9.59e-16 | 76.3 |
| MS.gene26340.t1 | AT3G57490 | 30.303 | 165 | 98 | 3 | 148 | 304 | 87 | 242 | 1.13e-15 | 75.9 |
Find 114 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAGAGCTGATGGAGATTA+TGG | 0.212582 | 4.1:-21328573 | MS.gene26340:intron |
| AGAGAGAGAGAATGGGGTTT+TGG | 0.268099 | 4.1:+21330627 | None:intergenic |
| GAGGGAAACAAATGAGGTTT+AGG | 0.287989 | 4.1:-21330258 | MS.gene26340:CDS |
| GAATGTGAGTTTGTGGGTTG+TGG | 0.290893 | 4.1:+21330657 | None:intergenic |
| TTGAAGGGAAGGTCTTCTTC+TGG | 0.304660 | 4.1:+21330547 | None:intergenic |
| TTCGACTGGACCGTCGTCTA+TGG | 0.308957 | 4.1:+21330486 | None:intergenic |
| ATGAAGCCTTCCGGGATTTC+CGG | 0.310489 | 4.1:+21330520 | None:intergenic |
| CGGGATTTCCGGTGGGTTGA+AGG | 0.323166 | 4.1:+21330531 | None:intergenic |
| AAGGATACCGGGTTCGGTTC+GGG | 0.333237 | 4.1:-21330358 | MS.gene26340:CDS |
| GAAGGATACCGGGTTCGGTT+CGG | 0.346246 | 4.1:-21330359 | MS.gene26340:CDS |
| GGATCCCTATGGAAGAATTA+TGG | 0.351460 | 4.1:-21328347 | MS.gene26340:CDS |
| TGAAGGGAAGGTCTTCTTCT+GGG | 0.352947 | 4.1:+21330548 | None:intergenic |
| AATGTGAGTTTGTGGGTTGT+GGG | 0.361016 | 4.1:+21330658 | None:intergenic |
| CCTGGTACCGGAGTTATTGC+AGG | 0.364105 | 4.1:-21328519 | MS.gene26340:CDS |
| GAGAGAGTAGAGAGAGAGAA+TGG | 0.379986 | 4.1:+21330619 | None:intergenic |
| GTGGTGGAATGAAGCCTTCC+GGG | 0.382928 | 4.1:+21330512 | None:intergenic |
| AGAGAAACAAGAGGAGGAGG+AGG | 0.387274 | 4.1:+21330687 | None:intergenic |
| GCCGGTGTTGAGAATGCTTT+GGG | 0.389280 | 4.1:-21328468 | MS.gene26340:CDS |
| AGGGTAACTAAGGTTGTTAA+AGG | 0.390142 | 4.1:-21330280 | MS.gene26340:CDS |
| TTTAGGGCTATTGTTGTTGT+TGG | 0.390533 | 4.1:-21330241 | MS.gene26340:CDS |
| CACTGCAGCTACAGTTGCTC+TGG | 0.409585 | 4.1:+21328410 | None:intergenic |
| GAGAGAGAAACAAGAGGAGG+AGG | 0.418200 | 4.1:+21330684 | None:intergenic |
| GGTGGTGGAATGAAGCCTTC+CGG | 0.420960 | 4.1:+21330511 | None:intergenic |
| AGAGAGTAGAGAGAGAGAAT+GGG | 0.427176 | 4.1:+21330620 | None:intergenic |
| ACAAGAGGAGGAGGAGGAAG+AGG | 0.428653 | 4.1:+21330693 | None:intergenic |
| GGAAAAGATAAGAGATGGGT+TGG | 0.430497 | 4.1:-21330326 | MS.gene26340:CDS |
| AGAGAATTGAGAGCGGAAGA+AGG | 0.444378 | 4.1:+21330736 | None:intergenic |
| AGGGAAACAAATGAGGTTTA+GGG | 0.444508 | 4.1:-21330257 | MS.gene26340:CDS |
| AACAGCAGAAACAACTTCCT+TGG | 0.450005 | 4.1:+21330180 | None:intergenic |
| TGAGAGGGAATGTGAGTTTG+TGG | 0.452351 | 4.1:+21330650 | None:intergenic |
| TGTGAGAATTGTTCTTGAAA+TGG | 0.455018 | 4.1:-21328490 | MS.gene26340:CDS |
| ATGCTTAGACCCGCTTCTCC+TGG | 0.460234 | 4.1:-21328537 | MS.gene26340:CDS |
| ATTTCATCTTCGTCTTCGAC+TGG | 0.464676 | 4.1:+21330472 | None:intergenic |
| GGCCGGTGTTGAGAATGCTT+TGG | 0.464816 | 4.1:-21328469 | MS.gene26340:CDS |
| AAGAAGGAAAAGATAAGAGA+TGG | 0.465607 | 4.1:-21330331 | MS.gene26340:CDS |
| TTTCCGGTGGGTTGAAGGGA+AGG | 0.470346 | 4.1:+21330536 | None:intergenic |
| TACAGTGGTGTTAGTGTGCT+TGG | 0.475022 | 4.1:-21330415 | MS.gene26340:CDS |
| GACGAGTTGGTGTTGGTGTT+GGG | 0.477749 | 4.1:-21330207 | MS.gene26340:CDS |
| GCGAGGAAGGATACCGGGTT+CGG | 0.479438 | 4.1:-21330364 | MS.gene26340:CDS |
| AAGAGTTGTTCAAGTGAGGA+GGG | 0.483572 | 4.1:-21330299 | MS.gene26340:CDS |
| TCAAGTGAGGAGGGTAACTA+AGG | 0.484987 | 4.1:-21330290 | MS.gene26340:CDS |
| GTTCGGTTCGGGTGCGAAGA+AGG | 0.486778 | 4.1:-21330347 | MS.gene26340:CDS |
| TCTCTCTACTCTCTCCTTCG+CGG | 0.487780 | 4.1:-21330611 | MS.gene26340:CDS |
| GAGAGGGAATGTGAGTTTGT+GGG | 0.488658 | 4.1:+21330651 | None:intergenic |
| GGACGAGTTGGTGTTGGTGT+TGG | 0.490278 | 4.1:-21330208 | MS.gene26340:CDS |
| GGGAAGGTCTTCTTCTGGGA+TGG | 0.507275 | 4.1:+21330552 | None:intergenic |
| CTTCAACCCACCGGAAATCC+CGG | 0.509862 | 4.1:-21330530 | MS.gene26340:CDS |
| GCCGCATACGAAGAGCTATA+CGG | 0.511899 | 4.1:-21330445 | MS.gene26340:CDS |
| AAAGAGTTGTTCAAGTGAGG+AGG | 0.515860 | 4.1:-21330300 | MS.gene26340:CDS |
| GAGAGTAGAGAGAGAGAATG+GGG | 0.517435 | 4.1:+21330621 | None:intergenic |
| AAGACGGCGAGGAAGGATAC+CGG | 0.519140 | 4.1:-21330370 | MS.gene26340:CDS |
| AAAAGTCAAGTACTTAGTCA+TGG | 0.522858 | 4.1:+21330114 | None:intergenic |
| TACTTCCATAATTCTTCCAT+AGG | 0.523427 | 4.1:+21328342 | None:intergenic |
| AGAAGGAAAAGATAAGAGAT+GGG | 0.524914 | 4.1:-21330330 | MS.gene26340:CDS |
| TTAAAGGAGGGAAACAAATG+AGG | 0.524916 | 4.1:-21330264 | MS.gene26340:CDS |
| AAGAAAGAGTTGTTCAAGTG+AGG | 0.526597 | 4.1:-21330303 | MS.gene26340:CDS |
| CTTCGCACCCGAACCGAACC+CGG | 0.526945 | 4.1:+21330351 | None:intergenic |
| AAGCCTTCCGGGATTTCCGG+TGG | 0.529062 | 4.1:+21330523 | None:intergenic |
| ATGTGAGTTTGTGGGTTGTG+GGG | 0.529517 | 4.1:+21330659 | None:intergenic |
| GGGATTTCCGGTGGGTTGAA+GGG | 0.530494 | 4.1:+21330532 | None:intergenic |
| GATGGTGTTGTCGAATTCAT+CGG | 0.536992 | 4.1:+21330570 | None:intergenic |
| GTAACTAAGGTTGTTAAAGG+AGG | 0.540545 | 4.1:-21330277 | MS.gene26340:CDS |
| AGAAATCTGCTATTAATGCT+AGG | 0.542732 | 4.1:-21330156 | MS.gene26340:CDS |
| CCGTCGTCTATGGAAGGTGG+TGG | 0.551471 | 4.1:+21330496 | None:intergenic |
| AATGCTTTGGGGAAACAACT+AGG | 0.554037 | 4.1:-21328456 | MS.gene26340:CDS |
| TGAGTTTGTGGGTTGTGGGG+AGG | 0.554542 | 4.1:+21330662 | None:intergenic |
| GTTGTCGAATTCATCGGAGG+TGG | 0.557558 | 4.1:+21330576 | None:intergenic |
| GTTAGAGAAAGTTACCTATG+AGG | 0.558410 | 4.1:+21330091 | None:intergenic |
| GATGGATAAGACGGCGAGGA+AGG | 0.559767 | 4.1:-21330377 | MS.gene26340:CDS |
| TGGAAATGATATAAATGTGA+TGG | 0.562907 | 4.1:-21330395 | MS.gene26340:CDS |
| CCTGCAATAACTCCGGTACC+AGG | 0.564590 | 4.1:+21328519 | None:intergenic |
| AAAGTCAAGTACTTAGTCAT+GGG | 0.565442 | 4.1:+21330115 | None:intergenic |
| TGAGGAGCGTGGGATCCCTA+TGG | 0.565454 | 4.1:-21328358 | MS.gene26340:CDS |
| ACTTCCATAATTCTTCCATA+GGG | 0.566653 | 4.1:+21328343 | None:intergenic |
| TGGAGATTATGGAGCGTCAA+AGG | 0.569341 | 4.1:-21328562 | MS.gene26340:CDS |
| ACTCCGGTACCAGGAGAAGC+GGG | 0.569424 | 4.1:+21328528 | None:intergenic |
| TAACTAAGGTTGTTAAAGGA+GGG | 0.570136 | 4.1:-21330276 | MS.gene26340:CDS |
| AGTGAGGTCGCTGAGGAGCG+TGG | 0.573201 | 4.1:-21328369 | MS.gene26340:CDS |
| AGACCCGCTTCTCCTGGTAC+CGG | 0.574190 | 4.1:-21328531 | MS.gene26340:CDS |
| GGTACCGGAGTTATTGCAGG+TGG | 0.578070 | 4.1:-21328516 | MS.gene26340:CDS |
| AACTCCGGTACCAGGAGAAG+CGG | 0.582114 | 4.1:+21328527 | None:intergenic |
| AGAATTGTTCTTGAAATGGC+CGG | 0.583079 | 4.1:-21328486 | MS.gene26340:CDS |
| GTGAGGTCGCTGAGGAGCGT+GGG | 0.589602 | 4.1:-21328368 | MS.gene26340:CDS |
| AGAAGAGAGAGAATTGAGAG+CGG | 0.592656 | 4.1:+21330729 | None:intergenic |
| GGGGAGGAGAGAGAAACAAG+AGG | 0.595007 | 4.1:+21330678 | None:intergenic |
| CCCCAAAGCATTCTCAACAC+CGG | 0.599175 | 4.1:+21328467 | None:intergenic |
| AGCCTTCCGGGATTTCCGGT+GGG | 0.602553 | 4.1:+21330524 | None:intergenic |
| AGACGGCGAGGAAGGATACC+GGG | 0.603653 | 4.1:-21330369 | MS.gene26340:CDS |
| AGGAGGAGGAGGAAGAGGAA+CGG | 0.604334 | 4.1:+21330698 | None:intergenic |
| ACTGGACCGTCGTCTATGGA+AGG | 0.605529 | 4.1:+21330490 | None:intergenic |
| TATAAATGTGATGGATAAGA+CGG | 0.605582 | 4.1:-21330386 | MS.gene26340:CDS |
| GGGAATTGCTTTGACCGCGA+AGG | 0.607546 | 4.1:+21330597 | None:intergenic |
| GAGGAGAGAGAAACAAGAGG+AGG | 0.611257 | 4.1:+21330681 | None:intergenic |
| AGACCTTCCCTTCAACCCAC+CGG | 0.615775 | 4.1:-21330539 | MS.gene26340:CDS |
| GCAGTACAGTGAGGTCGCTG+AGG | 0.616630 | 4.1:-21328376 | MS.gene26340:CDS |
| TTGTCGAATTCATCGGAGGT+GGG | 0.616706 | 4.1:+21330577 | None:intergenic |
| GTTGTTGTTGGTGATAAGCA+AGG | 0.618084 | 4.1:-21330229 | MS.gene26340:CDS |
| AAGCAAGGACGAGTTGGTGT+TGG | 0.635148 | 4.1:-21330214 | MS.gene26340:CDS |
| GGTGATAAGCAAGGACGAGT+TGG | 0.638537 | 4.1:-21330220 | MS.gene26340:CDS |
| ACCGTATAGCTCTTCGTATG+CGG | 0.640746 | 4.1:+21330444 | None:intergenic |
| AGACCCACCTGCAATAACTC+CGG | 0.641456 | 4.1:+21328512 | None:intergenic |
| AACCCACCGGAAATCCCGGA+AGG | 0.651503 | 4.1:-21330526 | MS.gene26340:CDS |
| GGACCGTCGTCTATGGAAGG+TGG | 0.656325 | 4.1:+21330493 | None:intergenic |
| AATCTGCTATTAATGCTAGG+AGG | 0.657188 | 4.1:-21330153 | MS.gene26340:CDS |
| CTATACGGTGTGGCGTACAG+TGG | 0.669321 | 4.1:-21330430 | MS.gene26340:CDS |
| GTACCGGAGTTATTGCAGGT+GGG | 0.671941 | 4.1:-21328515 | MS.gene26340:CDS |
| GAAAATGAAGCAGTACAGTG+AGG | 0.690707 | 4.1:-21328385 | MS.gene26340:CDS |
| GTATAGCTCTTCGTATGCGG+CGG | 0.690747 | 4.1:+21330447 | None:intergenic |
| GGTGTTGTCGAATTCATCGG+AGG | 0.692934 | 4.1:+21330573 | None:intergenic |
| ATGTGATGGATAAGACGGCG+AGG | 0.709872 | 4.1:-21330381 | MS.gene26340:CDS |
| TGTTGGTGTTGGGAAAGCCA+AGG | 0.713435 | 4.1:-21330197 | MS.gene26340:CDS |
| CCACCACCTTCCATAGACGA+CGG | 0.718416 | 4.1:-21330496 | MS.gene26340:CDS |
| ATACGAAGAGCTATACGGTG+TGG | 0.743299 | 4.1:-21330440 | MS.gene26340:CDS |
| CCGGTGTTGAGAATGCTTTG+GGG | 0.778015 | 4.1:-21328467 | MS.gene26340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTCATCAATCTTAATTT+TGG | - | chr4.1:21329027-21329046 | MS.gene26340:intron | 15.0% |
| !! | AAACTTATGGATGAAAAAAT+TGG | - | chr4.1:21329280-21329299 | MS.gene26340:intron | 20.0% |
| !! | AACTTATGGATGAAAAAATT+GGG | - | chr4.1:21329281-21329300 | MS.gene26340:intron | 20.0% |
| !! | ATTATGAATAATGCAATTCA+AGG | + | chr4.1:21329530-21329549 | None:intergenic | 20.0% |
| !! | ATTTGGATATTTGTGTATAT+AGG | - | chr4.1:21329570-21329589 | MS.gene26340:intron | 20.0% |
| !! | TAAATTTCCTTAACTCAAAT+AGG | - | chr4.1:21330324-21330343 | MS.gene26340:CDS | 20.0% |
| !! | TATATACGACATAAAATTAG+TGG | + | chr4.1:21330489-21330508 | None:intergenic | 20.0% |
| ! | AAATATCCACCATATAAGAA+GGG | + | chr4.1:21329904-21329923 | None:intergenic | 25.0% |
| ! | ACAATGTCATATTAATATGG+AGG | + | chr4.1:21329933-21329952 | None:intergenic | 25.0% |
| ! | TATCATTATCACTATGTTTC+CGG | - | chr4.1:21329856-21329875 | MS.gene26340:intron | 25.0% |
| ! | TCCATATTAATATGACATTG+TGG | - | chr4.1:21329932-21329951 | MS.gene26340:intron | 25.0% |
| ! | TGAGAAACGAATATGAAATA+TGG | - | chr4.1:21330030-21330049 | MS.gene26340:intron | 25.0% |
| ! | TGAGTTAAGGAAATTTAACA+GGG | + | chr4.1:21330321-21330340 | None:intergenic | 25.0% |
| ! | TGGAAATGATATAAATGTGA+TGG | - | chr4.1:21328694-21328713 | MS.gene26340:intron | 25.0% |
| ! | TTGAGTTAAGGAAATTTAAC+AGG | + | chr4.1:21330322-21330341 | None:intergenic | 25.0% |
| ! | TTGTGTATATAGGAGTTATT+GGG | - | chr4.1:21329580-21329599 | MS.gene26340:intron | 25.0% |
| ! | TTTGTGTATATAGGAGTTAT+TGG | - | chr4.1:21329579-21329598 | MS.gene26340:intron | 25.0% |
| !! | AATATAATGAAGCATTCTTG+TGG | - | chr4.1:21329635-21329654 | MS.gene26340:intron | 25.0% |
| !! | CTAATTTTTCTTTGACATGA+TGG | - | chr4.1:21329719-21329738 | MS.gene26340:intron | 25.0% |
| !!! | AGATGGAACTTTTATTTCAA+AGG | - | chr4.1:21330377-21330396 | MS.gene26340:CDS | 25.0% |
| !!! | ATTTTTACATAGAGCATTAC+AGG | + | chr4.1:21330011-21330030 | None:intergenic | 25.0% |
| !!! | GGTTTTGAATTTGAAACTTA+TGG | - | chr4.1:21329267-21329286 | MS.gene26340:intron | 25.0% |
| !!! | TATAAATGTGATGGATAAGA+CGG | - | chr4.1:21328703-21328722 | MS.gene26340:intron | 25.0% |
| AAAAGTCAAGTACTTAGTCA+TGG | + | chr4.1:21328978-21328997 | None:intergenic | 30.0% | |
| AAAGTCAAGTACTTAGTCAT+GGG | + | chr4.1:21328977-21328996 | None:intergenic | 30.0% | |
| AAGAAGGAAAAGATAAGAGA+TGG | - | chr4.1:21328758-21328777 | MS.gene26340:intron | 30.0% | |
| AATTCTAGCATCTTAGAACA+CGG | + | chr4.1:21330434-21330453 | None:intergenic | 30.0% | |
| ACAATGTTAAGAACACAAGA+AGG | + | chr4.1:21329486-21329505 | None:intergenic | 30.0% | |
| ACTTCCATAATTCTTCCATA+GGG | + | chr4.1:21330749-21330768 | None:intergenic | 30.0% | |
| AGAAATCTGCTATTAATGCT+AGG | - | chr4.1:21328933-21328952 | MS.gene26340:intron | 30.0% | |
| AGAAGGAAAAGATAAGAGAT+GGG | - | chr4.1:21328759-21328778 | MS.gene26340:intron | 30.0% | |
| ATGAATGCCTAAGTAACTTA+TGG | - | chr4.1:21330269-21330288 | MS.gene26340:CDS | 30.0% | |
| ATTCCTTCTTCTATTCTCAA+TGG | - | chr4.1:21329408-21329427 | MS.gene26340:intron | 30.0% | |
| CAAATATCCACCATATAAGA+AGG | + | chr4.1:21329905-21329924 | None:intergenic | 30.0% | |
| CATTGTATTAGAGCTTCATT+TGG | - | chr4.1:21329553-21329572 | MS.gene26340:intron | 30.0% | |
| CTAAACTAATCTCATTTACG+TGG | + | chr4.1:21329164-21329183 | None:intergenic | 30.0% | |
| GCCACAATGTCATATTAATA+TGG | + | chr4.1:21329936-21329955 | None:intergenic | 30.0% | |
| TAACTAAGGTTGTTAAAGGA+GGG | - | chr4.1:21328813-21328832 | MS.gene26340:intron | 30.0% | |
| TAAGTGACCATAAGTTACTT+AGG | + | chr4.1:21330279-21330298 | None:intergenic | 30.0% | |
| TACTTCCATAATTCTTCCAT+AGG | + | chr4.1:21330750-21330769 | None:intergenic | 30.0% | |
| TGTGAGAATTGTTCTTGAAA+TGG | - | chr4.1:21330599-21330618 | MS.gene26340:CDS | 30.0% | |
| TTAACAGGGAACATCTTAAT+AGG | + | chr4.1:21330307-21330326 | None:intergenic | 30.0% | |
| TTATGGATGAAAAAATTGGG+TGG | - | chr4.1:21329284-21329303 | MS.gene26340:intron | 30.0% | |
| ! | AGATTAGTCATTAGCATAGT+TGG | - | chr4.1:21329327-21329346 | MS.gene26340:intron | 30.0% |
| ! | GTTTTCCTGAATTTCAAATG+AGG | + | chr4.1:21329608-21329627 | None:intergenic | 30.0% |
| ! | TTAGCATCGTAAGATTTTAC+TGG | - | chr4.1:21330068-21330087 | MS.gene26340:intron | 30.0% |
| ! | TTCAGTTCCTATTTGAGTTA+AGG | + | chr4.1:21330334-21330353 | None:intergenic | 30.0% |
| !! | TTATATGGTGGATATTTGTC+TGG | - | chr4.1:21329907-21329926 | MS.gene26340:intron | 30.0% |
| AACTCGATAGAAACAAGCAA+AGG | + | chr4.1:21329454-21329473 | None:intergenic | 35.0% | |
| AAGAAAGAGTTGTTCAAGTG+AGG | - | chr4.1:21328786-21328805 | MS.gene26340:intron | 35.0% | |
| AATCTGCTATTAATGCTAGG+AGG | - | chr4.1:21328936-21328955 | MS.gene26340:intron | 35.0% | |
| ACATATGGCATGATAGTCAA+AGG | - | chr4.1:21329361-21329380 | MS.gene26340:intron | 35.0% | |
| ACCATCAAATGCTCAAATGA+AGG | + | chr4.1:21330094-21330113 | None:intergenic | 35.0% | |
| ACTTTGTGTACTGAACATTG+AGG | - | chr4.1:21329682-21329701 | MS.gene26340:intron | 35.0% | |
| AGAATTGTTCTTGAAATGGC+CGG | - | chr4.1:21330603-21330622 | MS.gene26340:CDS | 35.0% | |
| AGGGAAACAAATGAGGTTTA+GGG | - | chr4.1:21328832-21328851 | MS.gene26340:intron | 35.0% | |
| AGGGTAACTAAGGTTGTTAA+AGG | - | chr4.1:21328809-21328828 | MS.gene26340:intron | 35.0% | |
| ATTCTAGCATCTTAGAACAC+GGG | + | chr4.1:21330433-21330452 | None:intergenic | 35.0% | |
| CAAAGCAGATTCCACTATTT+AGG | + | chr4.1:21329958-21329977 | None:intergenic | 35.0% | |
| CAATTTGACAATGTGAGACA+CGG | + | chr4.1:21329769-21329788 | None:intergenic | 35.0% | |
| CATGATAGTCAAAGGTAAAG+GGG | - | chr4.1:21329369-21329388 | MS.gene26340:intron | 35.0% | |
| CTTATTCCACTAAGTGAGTT+CGG | + | chr4.1:21329115-21329134 | None:intergenic | 35.0% | |
| GATAGAAACAAGCAAAGGTA+AGG | + | chr4.1:21329449-21329468 | None:intergenic | 35.0% | |
| GCATGATAGTCAAAGGTAAA+GGG | - | chr4.1:21329368-21329387 | MS.gene26340:intron | 35.0% | |
| GTAACTAAGGTTGTTAAAGG+AGG | - | chr4.1:21328812-21328831 | MS.gene26340:intron | 35.0% | |
| GTTAGAGAAAGTTACCTATG+AGG | + | chr4.1:21329001-21329020 | None:intergenic | 35.0% | |
| GTTCCATTGAGAATAGAAGA+AGG | + | chr4.1:21329414-21329433 | None:intergenic | 35.0% | |
| TATCATGCATAATGCAATGC+TGG | + | chr4.1:21329792-21329811 | None:intergenic | 35.0% | |
| TGCGATAAGCATTCACAAAT+GGG | + | chr4.1:21330230-21330249 | None:intergenic | 35.0% | |
| TTAAAGGAGGGAAACAAATG+AGG | - | chr4.1:21328825-21328844 | MS.gene26340:intron | 35.0% | |
| TTGGCAAATGCTTTGACATA+TGG | - | chr4.1:21329346-21329365 | MS.gene26340:intron | 35.0% | |
| ! | AAATAGTGGAATCTGCTTTG+TGG | - | chr4.1:21329958-21329977 | MS.gene26340:intron | 35.0% |
| ! | AGTACTTGACTTTTCCTCAT+AGG | - | chr4.1:21328984-21329003 | MS.gene26340:intron | 35.0% |
| ! | TAATGTTTTTCCAGAGCTGA+TGG | - | chr4.1:21330507-21330526 | MS.gene26340:CDS | 35.0% |
| ! | TTTAGGGCTATTGTTGTTGT+TGG | - | chr4.1:21328848-21328867 | MS.gene26340:intron | 35.0% |
| AAAGAGTTGTTCAAGTGAGG+AGG | - | chr4.1:21328789-21328808 | MS.gene26340:intron | 40.0% | |
| AAAGGTAAAGGGGAAATCCT+TGG | - | chr4.1:21329379-21329398 | MS.gene26340:intron | 40.0% | |
| AACAGCAGAAACAACTTCCT+TGG | + | chr4.1:21328912-21328931 | None:intergenic | 40.0% | |
| AAGAGTTGTTCAAGTGAGGA+GGG | - | chr4.1:21328790-21328809 | MS.gene26340:intron | 40.0% | |
| AATGCTTATCGCAGCTGAAA+GGG | - | chr4.1:21330237-21330256 | MS.gene26340:CDS | 40.0% | |
| ACATTGAGGTAGAACAGACT+CGG | - | chr4.1:21329696-21329715 | MS.gene26340:intron | 40.0% | |
| ACTAAGTGAGTTCGGTTACA+TGG | + | chr4.1:21329107-21329126 | None:intergenic | 40.0% | |
| AGAAGAGAGAGAATTGAGAG+CGG | + | chr4.1:21328363-21328382 | None:intergenic | 40.0% | |
| AGAGAGTAGAGAGAGAGAAT+GGG | + | chr4.1:21328472-21328491 | None:intergenic | 40.0% | |
| AGATGCGTTGTATTCAGCTT+TGG | + | chr4.1:21330132-21330151 | None:intergenic | 40.0% | |
| ATGTAACCGAACTCACTTAG+TGG | - | chr4.1:21329106-21329125 | MS.gene26340:intron | 40.0% | |
| ATTTCATCTTCGTCTTCGAC+TGG | + | chr4.1:21328620-21328639 | None:intergenic | 40.0% | |
| CATCTGATTGAGGTTGTAGT+TGG | - | chr4.1:21330147-21330166 | MS.gene26340:CDS | 40.0% | |
| CGAACTCACTTAGTGGAATA+AGG | - | chr4.1:21329113-21329132 | MS.gene26340:intron | 40.0% | |
| CTGCGATAAGCATTCACAAA+TGG | + | chr4.1:21330231-21330250 | None:intergenic | 40.0% | |
| GAAAATGAAGCAGTACAGTG+AGG | - | chr4.1:21330704-21330723 | MS.gene26340:CDS | 40.0% | |
| GAATACAACGCATCTGATTG+AGG | - | chr4.1:21330137-21330156 | MS.gene26340:CDS | 40.0% | |
| GAGGGAAACAAATGAGGTTT+AGG | - | chr4.1:21328831-21328850 | MS.gene26340:intron | 40.0% | |
| GCCTTCATTTGAGCATTTGA+TGG | - | chr4.1:21330090-21330109 | MS.gene26340:intron | 40.0% | |
| GGAAAAGATAAGAGATGGGT+TGG | - | chr4.1:21328763-21328782 | MS.gene26340:intron | 40.0% | |
| GGATCCCTATGGAAGAATTA+TGG | - | chr4.1:21330742-21330761 | MS.gene26340:CDS | 40.0% | |
| GGATGAAAAAATTGGGTGGT+TGG | - | chr4.1:21329288-21329307 | MS.gene26340:intron | 40.0% | |
| GGCATGATAGTCAAAGGTAA+AGG | - | chr4.1:21329367-21329386 | MS.gene26340:intron | 40.0% | |
| TGACATTGTGGCCTAAATAG+TGG | - | chr4.1:21329944-21329963 | MS.gene26340:intron | 40.0% | |
| TGCATGATAGATTCTGTGCT+AGG | - | chr4.1:21329803-21329822 | MS.gene26340:intron | 40.0% | |
| TTCTAGCATCTTAGAACACG+GGG | + | chr4.1:21330432-21330451 | None:intergenic | 40.0% | |
| TTGACCAATGGGAAACTTGT+TGG | - | chr4.1:21329217-21329236 | MS.gene26340:intron | 40.0% | |
| ! | AATGTGAGTTTGTGGGTTGT+GGG | + | chr4.1:21328434-21328453 | None:intergenic | 40.0% |
| ! | AGGTCACACATGAAGTATCA+AGG | + | chr4.1:21329510-21329529 | None:intergenic | 40.0% |
| ! | GGGTACCTCATTTGAAATTC+AGG | - | chr4.1:21329600-21329619 | MS.gene26340:intron | 40.0% |
| ! | TATTCAGCTTTGGTATCCCT+CGG | + | chr4.1:21330122-21330141 | None:intergenic | 40.0% |
| !! | AATGCTTTGGGGAAACAACT+AGG | - | chr4.1:21330633-21330652 | MS.gene26340:CDS | 40.0% |
| !! | ATGAGCAACTTGTTGACCAA+TGG | - | chr4.1:21329205-21329224 | MS.gene26340:intron | 40.0% |
| !! | GATGGTGTTGTCGAATTCAT+CGG | + | chr4.1:21328522-21328541 | None:intergenic | 40.0% |
| !! | GTTGTTGTTGGTGATAAGCA+AGG | - | chr4.1:21328860-21328879 | MS.gene26340:intron | 40.0% |
| !! | TGAGCAACTTGTTGACCAAT+GGG | - | chr4.1:21329206-21329225 | MS.gene26340:intron | 40.0% |
| AACACGTATGCAGCGATCTA+CGG | + | chr4.1:21330202-21330221 | None:intergenic | 45.0% | |
| ACCGTATAGCTCTTCGTATG+CGG | + | chr4.1:21328648-21328667 | None:intergenic | 45.0% | |
| AGAGAATTGAGAGCGGAAGA+AGG | + | chr4.1:21328356-21328375 | None:intergenic | 45.0% | |
| AGTCTCTTCTTGCTGAGAGA+TGG | - | chr4.1:21330360-21330379 | MS.gene26340:CDS | 45.0% | |
| ATACGAAGAGCTATACGGTG+TGG | - | chr4.1:21328649-21328668 | MS.gene26340:intron | 45.0% | |
| GAAGAAGGAATTCTCCACCA+AGG | + | chr4.1:21329399-21329418 | None:intergenic | 45.0% | |
| GAATGCTTATCGCAGCTGAA+AGG | - | chr4.1:21330236-21330255 | MS.gene26340:CDS | 45.0% | |
| GAGAGAGTAGAGAGAGAGAA+TGG | + | chr4.1:21328473-21328492 | None:intergenic | 45.0% | |
| GAGAGGGAATGTGAGTTTGT+GGG | + | chr4.1:21328441-21328460 | None:intergenic | 45.0% | |
| GAGAGTAGAGAGAGAGAATG+GGG | + | chr4.1:21328471-21328490 | None:intergenic | 45.0% | |
| GCAATGCCCTTCTTATATGG+TGG | - | chr4.1:21329895-21329914 | MS.gene26340:intron | 45.0% | |
| GTCGCAATGCCCTTCTTATA+TGG | - | chr4.1:21329892-21329911 | MS.gene26340:intron | 45.0% | |
| TAGATCGCTGCATACGTGTT+TGG | - | chr4.1:21330202-21330221 | MS.gene26340:CDS | 45.0% | |
| TCAAGTGAGGAGGGTAACTA+AGG | - | chr4.1:21328799-21328818 | MS.gene26340:intron | 45.0% | |
| TCCAGAGCTGATGGAGATTA+TGG | - | chr4.1:21330516-21330535 | MS.gene26340:CDS | 45.0% | |
| TCCATAATCTCCATCAGCTC+TGG | + | chr4.1:21330520-21330539 | None:intergenic | 45.0% | |
| TGAAGGGAAGGTCTTCTTCT+GGG | + | chr4.1:21328544-21328563 | None:intergenic | 45.0% | |
| TGAGAGGGAATGTGAGTTTG+TGG | + | chr4.1:21328442-21328461 | None:intergenic | 45.0% | |
| TGGAACTGGACTCTGATGTA+AGG | - | chr4.1:21329246-21329265 | MS.gene26340:intron | 45.0% | |
| TGTTTCCGGCTTTCTGCTAT+AGG | - | chr4.1:21329870-21329889 | MS.gene26340:intron | 45.0% | |
| TTGAAGGGAAGGTCTTCTTC+TGG | + | chr4.1:21328545-21328564 | None:intergenic | 45.0% | |
| TTGTCGAATTCATCGGAGGT+GGG | + | chr4.1:21328515-21328534 | None:intergenic | 45.0% | |
| ! | AGAGAGAGAGAATGGGGTTT+TGG | + | chr4.1:21328465-21328484 | None:intergenic | 45.0% |
| ! | ATGTGAGTTTGTGGGTTGTG+GGG | + | chr4.1:21328433-21328452 | None:intergenic | 45.0% |
| ! | ATTCAGCTTTGGTATCCCTC+GGG | + | chr4.1:21330121-21330140 | None:intergenic | 45.0% |
| ! | GAATGTGAGTTTGTGGGTTG+TGG | + | chr4.1:21328435-21328454 | None:intergenic | 45.0% |
| ! | TACAGTGGTGTTAGTGTGCT+TGG | - | chr4.1:21328674-21328693 | MS.gene26340:intron | 45.0% |
| ! | TGGAGATTATGGAGCGTCAA+AGG | - | chr4.1:21330527-21330546 | MS.gene26340:CDS | 45.0% |
| !! | AGAATGGGGTTTTGGTGAGA+GGG | + | chr4.1:21328457-21328476 | None:intergenic | 45.0% |
| AAGATAGTCGCTGCTGCCTA+TGG | + | chr4.1:21329831-21329850 | None:intergenic | 50.0% | |
| AGACCCACCTGCAATAACTC+CGG | + | chr4.1:21330580-21330599 | None:intergenic | 50.0% | |
| AGAGAAACAAGAGGAGGAGG+AGG | + | chr4.1:21328405-21328424 | None:intergenic | 50.0% | |
| ATGAAGCCTTCCGGGATTTC+CGG | + | chr4.1:21328572-21328591 | None:intergenic | 50.0% | |
| CATCAGAGTCCAGTTCCACT+CGG | + | chr4.1:21329244-21329263 | None:intergenic | 50.0% | |
| CGGACCAACAAGTTTCCCAT+TGG | + | chr4.1:21329224-21329243 | None:intergenic | 50.0% | |
| GAAGCCAGACCTGTCTGATT+AGG | - | chr4.1:21329741-21329760 | MS.gene26340:intron | 50.0% | |
| GACACGGAACCTAATCAGAC+AGG | + | chr4.1:21329753-21329772 | None:intergenic | 50.0% | |
| GAGAGAGAAACAAGAGGAGG+AGG | + | chr4.1:21328408-21328427 | None:intergenic | 50.0% | |
| GAGGAGAGAGAAACAAGAGG+AGG | + | chr4.1:21328411-21328430 | None:intergenic | 50.0% | |
| GCCGCATACGAAGAGCTATA+CGG | - | chr4.1:21328644-21328663 | MS.gene26340:intron | 50.0% | |
| GGAACCTAATCAGACAGGTC+TGG | + | chr4.1:21329748-21329767 | None:intergenic | 50.0% | |
| GGTAAAGGGGAAATCCTTGG+TGG | - | chr4.1:21329382-21329401 | MS.gene26340:intron | 50.0% | |
| GGTGATAAGCAAGGACGAGT+TGG | - | chr4.1:21328869-21328888 | MS.gene26340:intron | 50.0% | |
| GTACCGGAGTTATTGCAGGT+GGG | - | chr4.1:21330574-21330593 | MS.gene26340:CDS | 50.0% | |
| GTATAGCTCTTCGTATGCGG+CGG | + | chr4.1:21328645-21328664 | None:intergenic | 50.0% | |
| GTTGTCGAATTCATCGGAGG+TGG | + | chr4.1:21328516-21328535 | None:intergenic | 50.0% | |
| TCTCTCTACTCTCTCCTTCG+CGG | - | chr4.1:21328478-21328497 | MS.gene26340:CDS | 50.0% | |
| TGCGACCTATAGCAGAAAGC+CGG | + | chr4.1:21329878-21329897 | None:intergenic | 50.0% | |
| ! | CATTTGATGGTTCTCCCCGA+GGG | - | chr4.1:21330103-21330122 | MS.gene26340:intron | 50.0% |
| ! | CCCCAAAGCATTCTCAACAC+CGG | + | chr4.1:21330625-21330644 | None:intergenic | 50.0% |
| ! | CCGGTGTTGAGAATGCTTTG+GGG | - | chr4.1:21330622-21330641 | MS.gene26340:CDS | 50.0% |
| ! | GATTCTGTGCTAGGTGCCAT+AGG | - | chr4.1:21329812-21329831 | MS.gene26340:intron | 50.0% |
| ! | GCCGGTGTTGAGAATGCTTT+GGG | - | chr4.1:21330621-21330640 | MS.gene26340:CDS | 50.0% |
| ! | GGTGTTGTCGAATTCATCGG+AGG | + | chr4.1:21328519-21328538 | None:intergenic | 50.0% |
| ! | TTCAGCTTTGGTATCCCTCG+GGG | + | chr4.1:21330120-21330139 | None:intergenic | 50.0% |
| !! | AAGCAAGGACGAGTTGGTGT+TGG | - | chr4.1:21328875-21328894 | MS.gene26340:intron | 50.0% |
| !! | ATGTGATGGATAAGACGGCG+AGG | - | chr4.1:21328708-21328727 | MS.gene26340:intron | 50.0% |
| !! | GACGAGTTGGTGTTGGTGTT+GGG | - | chr4.1:21328882-21328901 | MS.gene26340:intron | 50.0% |
| !! | GAGAATGGGGTTTTGGTGAG+AGG | + | chr4.1:21328458-21328477 | None:intergenic | 50.0% |
| !! | TGTTGGTGTTGGGAAAGCCA+AGG | - | chr4.1:21328892-21328911 | MS.gene26340:intron | 50.0% |
| AACTCCGGTACCAGGAGAAG+CGG | + | chr4.1:21330565-21330584 | None:intergenic | 55.0% | |
| AAGACGGCGAGGAAGGATAC+CGG | - | chr4.1:21328719-21328738 | MS.gene26340:intron | 55.0% | |
| ACAAGAGGAGGAGGAGGAAG+AGG | + | chr4.1:21328399-21328418 | None:intergenic | 55.0% | |
| ACTGGACCGTCGTCTATGGA+AGG | + | chr4.1:21328602-21328621 | None:intergenic | 55.0% | |
| AGACCTTCCCTTCAACCCAC+CGG | - | chr4.1:21328550-21328569 | MS.gene26340:CDS | 55.0% | |
| AGGAGGAGGAGGAAGAGGAA+CGG | + | chr4.1:21328394-21328413 | None:intergenic | 55.0% | |
| ATGCTTAGACCCGCTTCTCC+TGG | - | chr4.1:21330552-21330571 | MS.gene26340:CDS | 55.0% | |
| CACTGCAGCTACAGTTGCTC+TGG | + | chr4.1:21330682-21330701 | None:intergenic | 55.0% | |
| CCACCACCTTCCATAGACGA+CGG | - | chr4.1:21328593-21328612 | MS.gene26340:intron | 55.0% | |
| CCTGCAATAACTCCGGTACC+AGG | + | chr4.1:21330573-21330592 | None:intergenic | 55.0% | |
| CTATACGGTGTGGCGTACAG+TGG | - | chr4.1:21328659-21328678 | MS.gene26340:intron | 55.0% | |
| CTTCAACCCACCGGAAATCC+CGG | - | chr4.1:21328559-21328578 | MS.gene26340:CDS | 55.0% | |
| CTTGTTGGTCCGAGTGGAAC+TGG | - | chr4.1:21329232-21329251 | MS.gene26340:intron | 55.0% | |
| GATGGATAAGACGGCGAGGA+AGG | - | chr4.1:21328712-21328731 | MS.gene26340:intron | 55.0% | |
| GGGAATTGCTTTGACCGCGA+AGG | + | chr4.1:21328495-21328514 | None:intergenic | 55.0% | |
| GGGGAGGAGAGAGAAACAAG+AGG | + | chr4.1:21328414-21328433 | None:intergenic | 55.0% | |
| TTCGACTGGACCGTCGTCTA+TGG | + | chr4.1:21328606-21328625 | None:intergenic | 55.0% | |
| ! | AAGGATACCGGGTTCGGTTC+GGG | - | chr4.1:21328731-21328750 | MS.gene26340:intron | 55.0% |
| ! | CCTGGTACCGGAGTTATTGC+AGG | - | chr4.1:21330570-21330589 | MS.gene26340:CDS | 55.0% |
| ! | GAAGGATACCGGGTTCGGTT+CGG | - | chr4.1:21328730-21328749 | MS.gene26340:intron | 55.0% |
| ! | GCATTTGATGGTTCTCCCCG+AGG | - | chr4.1:21330102-21330121 | MS.gene26340:intron | 55.0% |
| ! | GGCCGGTGTTGAGAATGCTT+TGG | - | chr4.1:21330620-21330639 | MS.gene26340:CDS | 55.0% |
| ! | GGGAAGGTCTTCTTCTGGGA+TGG | + | chr4.1:21328540-21328559 | None:intergenic | 55.0% |
| ! | GGTACCGGAGTTATTGCAGG+TGG | - | chr4.1:21330573-21330592 | MS.gene26340:CDS | 55.0% |
| ! | GTGGTGGAATGAAGCCTTCC+GGG | + | chr4.1:21328580-21328599 | None:intergenic | 55.0% |
| ! | TGAGTTTGTGGGTTGTGGGG+AGG | + | chr4.1:21328430-21328449 | None:intergenic | 55.0% |
| !! | GGACGAGTTGGTGTTGGTGT+TGG | - | chr4.1:21328881-21328900 | MS.gene26340:intron | 55.0% |
| !! | GGGAAACTTGTTGGTCCGAG+TGG | - | chr4.1:21329226-21329245 | MS.gene26340:intron | 55.0% |
| !! | GGGATTTCCGGTGGGTTGAA+GGG | + | chr4.1:21328560-21328579 | None:intergenic | 55.0% |
| !! | GGTGGTGGAATGAAGCCTTC+CGG | + | chr4.1:21328581-21328600 | None:intergenic | 55.0% |
| !! | TTTCCGGTGGGTTGAAGGGA+AGG | + | chr4.1:21328556-21328575 | None:intergenic | 55.0% |
| AACCCACCGGAAATCCCGGA+AGG | - | chr4.1:21328563-21328582 | MS.gene26340:CDS | 60.0% | |
| AAGCCTTCCGGGATTTCCGG+TGG | + | chr4.1:21328569-21328588 | None:intergenic | 60.0% | |
| ACTCCGGTACCAGGAGAAGC+GGG | + | chr4.1:21330564-21330583 | None:intergenic | 60.0% | |
| AGACCCGCTTCTCCTGGTAC+CGG | - | chr4.1:21330558-21330577 | MS.gene26340:CDS | 60.0% | |
| AGACGGCGAGGAAGGATACC+GGG | - | chr4.1:21328720-21328739 | MS.gene26340:intron | 60.0% | |
| AGCCTTCCGGGATTTCCGGT+GGG | + | chr4.1:21328568-21328587 | None:intergenic | 60.0% | |
| CCGTCGTCTATGGAAGGTGG+TGG | + | chr4.1:21328596-21328615 | None:intergenic | 60.0% | |
| GCAGTACAGTGAGGTCGCTG+AGG | - | chr4.1:21330713-21330732 | MS.gene26340:CDS | 60.0% | |
| GCGAGGAAGGATACCGGGTT+CGG | - | chr4.1:21328725-21328744 | MS.gene26340:intron | 60.0% | |
| GGACCGTCGTCTATGGAAGG+TGG | + | chr4.1:21328599-21328618 | None:intergenic | 60.0% | |
| ! | TGAGGAGCGTGGGATCCCTA+TGG | - | chr4.1:21330731-21330750 | MS.gene26340:CDS | 60.0% |
| !! | CGGGATTTCCGGTGGGTTGA+AGG | + | chr4.1:21328561-21328580 | None:intergenic | 60.0% |
| !! | GTTCGGTTCGGGTGCGAAGA+AGG | - | chr4.1:21328742-21328761 | MS.gene26340:intron | 60.0% |
| AGTGAGGTCGCTGAGGAGCG+TGG | - | chr4.1:21330720-21330739 | MS.gene26340:CDS | 65.0% | |
| CTTCGCACCCGAACCGAACC+CGG | + | chr4.1:21328741-21328760 | None:intergenic | 65.0% | |
| ! | GTGAGGTCGCTGAGGAGCGT+GGG | - | chr4.1:21330721-21330740 | MS.gene26340:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 21328341 | 21330770 | 21328341 | ID=MS.gene26340 |
| chr4.1 | mRNA | 21328341 | 21330770 | 21328341 | ID=MS.gene26340.t1;Parent=MS.gene26340 |
| chr4.1 | exon | 21330106 | 21330770 | 21330106 | ID=MS.gene26340.t1.exon1;Parent=MS.gene26340.t1 |
| chr4.1 | CDS | 21330106 | 21330770 | 21330106 | ID=cds.MS.gene26340.t1;Parent=MS.gene26340.t1 |
| chr4.1 | exon | 21328341 | 21328590 | 21328341 | ID=MS.gene26340.t1.exon2;Parent=MS.gene26340.t1 |
| chr4.1 | CDS | 21328341 | 21328590 | 21328341 | ID=cds.MS.gene26340.t1;Parent=MS.gene26340.t1 |
| Gene Sequence |
| Protein sequence |
