Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92871.t1 | XP_003599052.1 | 94 | 235 | 13 | 1 | 1 | 234 | 1 | 235 | 1.30E-111 | 412.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92871.t1 | Q8VYM4 | 63.0 | 227 | 77 | 4 | 15 | 234 | 27 | 253 | 4.4e-68 | 259.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92871.t1 | G7J1T1 | 94.0 | 235 | 13 | 1 | 1 | 234 | 1 | 235 | 9.2e-112 | 412.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92871 | 0.830695 | 2.54E-55 | -1.69E-46 |
| MS.gene049284 | MS.gene92871 | 0.852464 | 4.54E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene92871 | 0.860417 | 2.10E-63 | -1.69E-46 |
| MS.gene049427 | MS.gene92871 | 0.863989 | 1.68E-64 | -1.69E-46 |
| MS.gene049491 | MS.gene92871 | 0.863962 | 1.71E-64 | -1.69E-46 |
| MS.gene049614 | MS.gene92871 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene92871 | 0.866236 | 3.31E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene92871 | 0.864383 | 1.26E-64 | -1.69E-46 |
| MS.gene049681 | MS.gene92871 | 0.804479 | 2.12E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene92871 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene049760 | MS.gene92871 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene92871 | 0.833179 | 6.19E-56 | -1.69E-46 |
| MS.gene049910 | MS.gene92871 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene92871 | 0.870776 | 1.13E-66 | -1.69E-46 |
| MS.gene050099 | MS.gene92871 | 0.822981 | 1.77E-53 | -1.69E-46 |
| MS.gene050231 | MS.gene92871 | 0.836733 | 7.87E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene92871 | 0.884567 | 1.72E-71 | -1.69E-46 |
| MS.gene050397 | MS.gene92871 | 0.864157 | 1.49E-64 | -1.69E-46 |
| MS.gene050404 | MS.gene92871 | 0.80347 | 3.43E-49 | -1.69E-46 |
| MS.gene050406 | MS.gene92871 | 0.812671 | 3.77E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene92871 | 0.835014 | 2.15E-56 | -1.69E-46 |
| MS.gene050464 | MS.gene92871 | 0.871817 | 5.12E-67 | -1.69E-46 |
| MS.gene050529 | MS.gene92871 | 0.890498 | 9.33E-74 | -1.69E-46 |
| MS.gene05053 | MS.gene92871 | 0.803711 | 3.06E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene92871 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene92871 | 0.874099 | 8.80E-68 | -1.69E-46 |
| MS.gene050767 | MS.gene92871 | 0.818638 | 1.77E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene92871 | 0.819208 | 1.31E-52 | -1.69E-46 |
| MS.gene050783 | MS.gene92871 | 0.826018 | 3.41E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene92871 | 0.842408 | 2.63E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene92871 | 0.892987 | 9.56E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene92871 | 0.867326 | 1.49E-65 | -1.69E-46 |
| MS.gene051255 | MS.gene92871 | 0.800978 | 1.12E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene92871 | 0.859647 | 3.58E-63 | -1.69E-46 |
| MS.gene051471 | MS.gene92871 | 0.847736 | 9.58E-60 | -1.69E-46 |
| MS.gene051525 | MS.gene92871 | 0.843229 | 1.59E-58 | -1.69E-46 |
| MS.gene051582 | MS.gene92871 | 0.855422 | 6.38E-62 | -1.69E-46 |
| MS.gene051605 | MS.gene92871 | 0.817966 | 2.51E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene92871 | 0.821598 | 3.71E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene92871 | 0.827365 | 1.63E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene92871 | 0.843585 | 1.28E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene92871 | -0.825173 | 5.41E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene92871 | 0.862989 | 3.43E-64 | -1.69E-46 |
| MS.gene052178 | MS.gene92871 | 0.818088 | 2.35E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene92871 | 0.86745 | 1.36E-65 | -1.69E-46 |
| MS.gene052207 | MS.gene92871 | 0.824414 | 8.18E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene92871 | 0.872712 | 2.58E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene92871 | 0.89099 | 5.97E-74 | -1.69E-46 |
| MS.gene052322 | MS.gene92871 | 0.820082 | 8.28E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene92871 | 0.85466 | 1.06E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene92871 | 0.846489 | 2.10E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene92871 | 0.806915 | 6.52E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene92871 | 0.850013 | 2.23E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene92871 | 0.862944 | 3.54E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene92871 | 0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene92871 | 0.864932 | 8.52E-65 | -1.69E-46 |
| MS.gene052501 | MS.gene92871 | 0.800898 | 1.16E-48 | -1.69E-46 |
| MS.gene052505 | MS.gene92871 | 0.820238 | 7.62E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene92871 | 0.819926 | 8.99E-53 | -1.69E-46 |
| MS.gene052767 | MS.gene92871 | 0.801297 | 9.62E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene92871 | 0.820756 | 5.80E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene92871 | 0.834085 | 3.67E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene92871 | 0.805177 | 1.51E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene92871 | 0.821753 | 3.42E-53 | -1.69E-46 |
| MS.gene053322 | MS.gene92871 | 0.859146 | 5.06E-63 | -1.69E-46 |
| MS.gene053557 | MS.gene92871 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene92871 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene92871 | 0.809291 | 2.04E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene92871 | 0.864182 | 1.46E-64 | -1.69E-46 |
| MS.gene053915 | MS.gene92871 | 0.803612 | 3.21E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene92871 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene054010 | MS.gene92871 | 0.806718 | 7.18E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene92871 | 0.821001 | 5.09E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene92871 | 0.816015 | 6.88E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene92871 | 0.815291 | 9.97E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene92871 | 0.82063 | 6.20E-53 | -1.69E-46 |
| MS.gene054183 | MS.gene92871 | 0.82549 | 4.56E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene92871 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene92871 | 0.835783 | 1.37E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene92871 | 0.813325 | 2.71E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene92871 | 0.839763 | 1.30E-57 | -1.69E-46 |
| MS.gene054719 | MS.gene92871 | 0.813431 | 2.57E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene92871 | 0.846862 | 1.66E-59 | -1.69E-46 |
| MS.gene054803 | MS.gene92871 | 0.844714 | 6.37E-59 | -1.69E-46 |
| MS.gene054804 | MS.gene92871 | 0.846105 | 2.68E-59 | -1.69E-46 |
| MS.gene054955 | MS.gene92871 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene05504 | MS.gene92871 | 0.81201 | 5.26E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene92871 | 0.820356 | 7.16E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene92871 | 0.879865 | 8.79E-70 | -1.69E-46 |
| MS.gene055277 | MS.gene92871 | 0.890179 | 1.24E-73 | -1.69E-46 |
| MS.gene055369 | MS.gene92871 | 0.802037 | 6.79E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene92871 | 0.848502 | 5.89E-60 | -1.69E-46 |
| MS.gene055397 | MS.gene92871 | 0.812465 | 4.18E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene92871 | 0.837516 | 4.96E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene92871 | 0.873572 | 1.33E-67 | -1.69E-46 |
| MS.gene055428 | MS.gene92871 | 0.866099 | 3.65E-65 | -1.69E-46 |
| MS.gene055499 | MS.gene92871 | 0.832801 | 7.68E-56 | -1.69E-46 |
| MS.gene055533 | MS.gene92871 | 0.808948 | 2.41E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene92871 | 0.812543 | 4.02E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene92871 | 0.828191 | 1.03E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene92871 | 0.811047 | 8.51E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene92871 | 0.806039 | 9.98E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene92871 | 0.888247 | 6.99E-73 | -1.69E-46 |
| MS.gene056407 | MS.gene92871 | 0.854298 | 1.35E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene92871 | 0.838886 | 2.20E-57 | -1.69E-46 |
| MS.gene056451 | MS.gene92871 | 0.814436 | 1.54E-51 | -1.69E-46 |
| MS.gene056452 | MS.gene92871 | 0.837827 | 4.13E-57 | -1.69E-46 |
| MS.gene056497 | MS.gene92871 | 0.808861 | 2.52E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene92871 | 0.829682 | 4.49E-55 | -1.69E-46 |
| MS.gene056609 | MS.gene92871 | 0.827932 | 1.19E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene92871 | 0.857125 | 2.02E-62 | -1.69E-46 |
| MS.gene056659 | MS.gene92871 | 0.817732 | 2.83E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene92871 | 0.800075 | 1.71E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene92871 | 0.840096 | 1.07E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene92871 | -0.834119 | 3.60E-56 | -1.69E-46 |
| MS.gene056931 | MS.gene92871 | 0.818881 | 1.56E-52 | -1.69E-46 |
| MS.gene056933 | MS.gene92871 | 0.814404 | 1.57E-51 | -1.69E-46 |
| MS.gene056935 | MS.gene92871 | 0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene056942 | MS.gene92871 | 0.825574 | 4.35E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene92871 | 0.858537 | 7.70E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene92871 | 0.861476 | 9.99E-64 | -1.69E-46 |
| MS.gene057121 | MS.gene92871 | 0.84581 | 3.22E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene92871 | 0.856883 | 2.38E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene92871 | 0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene92871 | 0.823463 | 1.37E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene92871 | 0.892862 | 1.07E-74 | -1.69E-46 |
| MS.gene057245 | MS.gene92871 | 0.82553 | 4.46E-54 | -1.69E-46 |
| MS.gene057295 | MS.gene92871 | 0.811603 | 6.45E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene92871 | 0.844613 | 6.78E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene92871 | 0.821938 | 3.09E-53 | -1.69E-46 |
| MS.gene057439 | MS.gene92871 | 0.807363 | 5.24E-50 | -1.69E-46 |
| MS.gene057476 | MS.gene92871 | 0.806546 | 7.81E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene92871 | 0.874425 | 6.82E-68 | -1.69E-46 |
| MS.gene057779 | MS.gene92871 | 0.824815 | 6.58E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene92871 | 0.86923 | 3.62E-66 | -1.69E-46 |
| MS.gene057825 | MS.gene92871 | 0.816666 | 4.92E-52 | -1.69E-46 |
| MS.gene057845 | MS.gene92871 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene92871 | 0.871713 | 5.54E-67 | -1.69E-46 |
| MS.gene058007 | MS.gene92871 | 0.813291 | 2.76E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene92871 | 0.85586 | 4.75E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene92871 | 0.858413 | 8.38E-63 | -1.69E-46 |
| MS.gene058142 | MS.gene92871 | 0.810795 | 9.65E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene92871 | -0.821572 | 3.76E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene92871 | 0.888801 | 4.28E-73 | -1.69E-46 |
| MS.gene058276 | MS.gene92871 | 0.80378 | 2.96E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene92871 | 0.866311 | 3.13E-65 | -1.69E-46 |
| MS.gene058365 | MS.gene92871 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene058376 | MS.gene92871 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene92871 | 0.817826 | 2.70E-52 | -1.69E-46 |
| MS.gene058537 | MS.gene92871 | -0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene92871 | 0.928153 | 4.32E-92 | -1.69E-46 |
| MS.gene058700 | MS.gene92871 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene058787 | MS.gene92871 | 0.813987 | 1.94E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene92871 | 0.822809 | 1.94E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene92871 | 0.847208 | 1.34E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene92871 | 0.860122 | 2.57E-63 | -1.69E-46 |
| MS.gene058995 | MS.gene92871 | 0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene92871 | 0.884191 | 2.37E-71 | -1.69E-46 |
| MS.gene059141 | MS.gene92871 | 0.872184 | 3.86E-67 | -1.69E-46 |
| MS.gene059294 | MS.gene92871 | 0.835849 | 1.32E-56 | -1.69E-46 |
| MS.gene059326 | MS.gene92871 | 0.80108 | 1.07E-48 | -1.69E-46 |
| MS.gene059366 | MS.gene92871 | 0.811646 | 6.31E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene92871 | 0.849511 | 3.09E-60 | -1.69E-46 |
| MS.gene059518 | MS.gene92871 | 0.82188 | 3.19E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene92871 | 0.892586 | 1.38E-74 | -1.69E-46 |
| MS.gene059597 | MS.gene92871 | 0.89699 | 2.17E-76 | -1.69E-46 |
| MS.gene059676 | MS.gene92871 | 0.86752 | 1.29E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene92871 | 0.897351 | 1.53E-76 | -1.69E-46 |
| MS.gene059692 | MS.gene92871 | 0.893851 | 4.28E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene92871 | 0.89893 | 3.27E-77 | -1.69E-46 |
| MS.gene059711 | MS.gene92871 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene92871 | 0.853703 | 2.00E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene92871 | 0.840214 | 9.95E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene92871 | 0.870849 | 1.07E-66 | -1.69E-46 |
| MS.gene06037 | MS.gene92871 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene060403 | MS.gene92871 | 0.836299 | 1.02E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene92871 | 0.816529 | 5.28E-52 | -1.69E-46 |
| MS.gene060559 | MS.gene92871 | 0.819309 | 1.24E-52 | -1.69E-46 |
| MS.gene060675 | MS.gene92871 | 0.800074 | 1.71E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene92871 | 0.846965 | 1.56E-59 | -1.69E-46 |
| MS.gene060818 | MS.gene92871 | 0.818225 | 2.19E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene92871 | 0.808717 | 2.70E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene92871 | 0.814382 | 1.58E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene92871 | 0.81632 | 5.88E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene92871 | 0.885191 | 1.01E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene92871 | -0.823284 | 1.50E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene92871 | 0.800362 | 1.49E-48 | -1.69E-46 |
| MS.gene061200 | MS.gene92871 | 0.856714 | 2.67E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92871.t1 | MTR_3g027140 | 94.043 | 235 | 13 | 1 | 1 | 234 | 1 | 235 | 2.08e-159 | 441 |
| MS.gene92871.t1 | MTR_1g056520 | 42.614 | 176 | 101 | 0 | 59 | 234 | 108 | 283 | 6.97e-45 | 152 |
| MS.gene92871.t1 | MTR_7g106440 | 40.526 | 190 | 109 | 1 | 49 | 234 | 99 | 288 | 7.74e-43 | 147 |
| MS.gene92871.t1 | MTR_1g045510 | 39.429 | 175 | 98 | 1 | 60 | 234 | 114 | 280 | 4.95e-40 | 139 |
| MS.gene92871.t1 | MTR_1g064230 | 34.884 | 258 | 134 | 5 | 1 | 234 | 25 | 272 | 2.15e-35 | 127 |
| MS.gene92871.t1 | MTR_3g075500 | 40.212 | 189 | 109 | 2 | 47 | 234 | 97 | 282 | 3.62e-34 | 124 |
| MS.gene92871.t1 | MTR_3g075500 | 39.241 | 79 | 48 | 0 | 58 | 136 | 205 | 283 | 8.49e-13 | 66.6 |
| MS.gene92871.t1 | MTR_4g104470 | 38.286 | 175 | 103 | 2 | 60 | 234 | 123 | 292 | 1.38e-30 | 115 |
| MS.gene92871.t1 | MTR_4g104470 | 44.872 | 78 | 43 | 0 | 60 | 137 | 217 | 294 | 1.60e-16 | 77.4 |
| MS.gene92871.t1 | MTR_3g075500 | 40.110 | 182 | 100 | 3 | 47 | 227 | 97 | 270 | 2.53e-30 | 113 |
| MS.gene92871.t1 | MTR_4g124940 | 29.381 | 194 | 111 | 3 | 61 | 232 | 133 | 322 | 3.08e-17 | 80.1 |
| MS.gene92871.t1 | MTR_4g124940 | 31.492 | 181 | 110 | 4 | 54 | 234 | 41 | 207 | 9.37e-17 | 79.0 |
| MS.gene92871.t1 | MTR_8g022050 | 29.834 | 181 | 113 | 4 | 54 | 234 | 57 | 223 | 3.71e-15 | 74.3 |
| MS.gene92871.t1 | MTR_8g022050 | 28.218 | 202 | 118 | 5 | 54 | 232 | 142 | 339 | 5.25e-13 | 67.8 |
| MS.gene92871.t1 | MTR_4g085540 | 28.070 | 171 | 111 | 2 | 61 | 231 | 36 | 194 | 4.39e-15 | 74.3 |
| MS.gene92871.t1 | MTR_4g085540 | 31.053 | 190 | 124 | 4 | 50 | 234 | 204 | 391 | 7.72e-14 | 70.5 |
| MS.gene92871.t1 | MTR_3g082650 | 25.000 | 184 | 121 | 3 | 54 | 234 | 13 | 182 | 7.85e-15 | 72.8 |
| MS.gene92871.t1 | MTR_6g040070 | 28.079 | 203 | 121 | 5 | 40 | 228 | 86 | 277 | 9.19e-15 | 73.6 |
| MS.gene92871.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 54 | 234 | 39 | 205 | 1.18e-14 | 72.8 |
| MS.gene92871.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 61 | 231 | 131 | 320 | 3.79e-12 | 65.5 |
| MS.gene92871.t1 | MTR_3g109090 | 28.649 | 185 | 110 | 3 | 54 | 234 | 55 | 221 | 1.24e-14 | 72.8 |
| MS.gene92871.t1 | MTR_3g109090 | 25.258 | 194 | 118 | 3 | 61 | 231 | 147 | 336 | 4.10e-12 | 65.5 |
| MS.gene92871.t1 | MTR_6g004810 | 25.258 | 194 | 120 | 4 | 48 | 234 | 34 | 209 | 1.82e-14 | 72.0 |
| MS.gene92871.t1 | MTR_1g061870 | 30.102 | 196 | 123 | 6 | 44 | 232 | 178 | 366 | 3.89e-14 | 71.2 |
| MS.gene92871.t1 | MTR_1g061870 | 26.455 | 189 | 127 | 2 | 45 | 233 | 1 | 177 | 1.01e-13 | 70.1 |
| MS.gene92871.t1 | MTR_3g065190 | 27.586 | 174 | 113 | 2 | 62 | 234 | 28 | 189 | 5.83e-14 | 70.5 |
| MS.gene92871.t1 | MTR_1g019150 | 29.146 | 199 | 132 | 5 | 40 | 231 | 191 | 387 | 1.15e-13 | 70.1 |
| MS.gene92871.t1 | MTR_1g019150 | 24.561 | 171 | 117 | 2 | 61 | 231 | 34 | 192 | 4.02e-12 | 65.5 |
| MS.gene92871.t1 | MTR_5g030020 | 31.429 | 175 | 113 | 5 | 59 | 231 | 96 | 265 | 5.69e-13 | 67.4 |
| MS.gene92871.t1 | MTR_1g097440 | 30.102 | 196 | 112 | 5 | 44 | 224 | 193 | 378 | 7.56e-13 | 67.8 |
| MS.gene92871.t1 | MTR_7g102730 | 30.556 | 180 | 116 | 4 | 61 | 234 | 191 | 367 | 1.13e-12 | 67.0 |
| MS.gene92871.t1 | MTR_7g102730 | 27.746 | 173 | 113 | 3 | 61 | 233 | 12 | 172 | 8.28e-12 | 64.7 |
| MS.gene92871.t1 | MTR_7g102730 | 27.624 | 181 | 116 | 5 | 57 | 234 | 96 | 264 | 7.26e-11 | 62.0 |
| MS.gene92871.t1 | MTR_3g099590 | 25.701 | 214 | 143 | 6 | 27 | 231 | 50 | 256 | 1.47e-12 | 65.9 |
| MS.gene92871.t1 | MTR_7g118230 | 29.730 | 148 | 96 | 2 | 23 | 165 | 2 | 146 | 2.95e-12 | 65.5 |
| MS.gene92871.t1 | MTR_3g102040 | 24.561 | 171 | 117 | 2 | 61 | 231 | 26 | 184 | 6.97e-12 | 64.7 |
| MS.gene92871.t1 | MTR_3g102040 | 31.868 | 182 | 111 | 6 | 61 | 234 | 205 | 381 | 1.75e-11 | 63.5 |
| MS.gene92871.t1 | MTR_2g097960 | 24.719 | 178 | 127 | 2 | 58 | 234 | 14 | 185 | 1.06e-11 | 63.9 |
| MS.gene92871.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 59 | 234 | 4 | 166 | 2.43e-11 | 62.8 |
| MS.gene92871.t1 | MTR_5g017280 | 26.554 | 177 | 115 | 4 | 59 | 234 | 4 | 166 | 3.76e-11 | 62.4 |
| MS.gene92871.t1 | MTR_6g040190 | 25.581 | 172 | 114 | 4 | 61 | 231 | 27 | 185 | 3.80e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92871.t1 | AT3G52150 | 63.877 | 227 | 75 | 5 | 15 | 234 | 27 | 253 | 1.09e-93 | 275 |
| MS.gene92871.t1 | AT3G52150 | 63.877 | 227 | 75 | 5 | 15 | 234 | 27 | 253 | 1.09e-93 | 275 |
| MS.gene92871.t1 | AT3G52380 | 41.885 | 191 | 103 | 2 | 50 | 234 | 107 | 295 | 3.59e-45 | 154 |
| MS.gene92871.t1 | AT1G60000 | 40.323 | 186 | 102 | 2 | 51 | 234 | 75 | 253 | 1.08e-38 | 135 |
| MS.gene92871.t1 | AT2G37220 | 33.466 | 251 | 118 | 5 | 19 | 234 | 44 | 280 | 3.27e-35 | 127 |
| MS.gene92871.t1 | AT5G50250 | 38.122 | 181 | 107 | 2 | 54 | 234 | 108 | 283 | 2.30e-34 | 124 |
| MS.gene92871.t1 | AT5G50250 | 41.026 | 78 | 46 | 0 | 60 | 137 | 208 | 285 | 1.24e-13 | 68.9 |
| MS.gene92871.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 48 | 234 | 138 | 320 | 4.17e-31 | 117 |
| MS.gene92871.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 56 | 137 | 242 | 322 | 4.05e-17 | 79.3 |
| MS.gene92871.t1 | AT4G24770 | 38.830 | 188 | 109 | 3 | 48 | 234 | 138 | 320 | 4.17e-31 | 117 |
| MS.gene92871.t1 | AT4G24770 | 46.341 | 82 | 43 | 1 | 56 | 137 | 242 | 322 | 4.05e-17 | 79.3 |
| MS.gene92871.t1 | AT1G01080 | 33.505 | 194 | 123 | 3 | 46 | 234 | 95 | 287 | 1.13e-22 | 94.0 |
| MS.gene92871.t1 | AT2G35410 | 33.871 | 186 | 112 | 4 | 50 | 229 | 86 | 266 | 2.35e-22 | 93.2 |
| MS.gene92871.t1 | AT1G01080 | 33.333 | 195 | 123 | 4 | 46 | 234 | 95 | 288 | 2.09e-21 | 90.5 |
| MS.gene92871.t1 | AT1G01080 | 33.333 | 183 | 116 | 3 | 46 | 223 | 95 | 276 | 1.66e-20 | 88.2 |
| MS.gene92871.t1 | AT1G22760 | 33.846 | 195 | 115 | 6 | 40 | 224 | 207 | 397 | 2.40e-18 | 84.0 |
| MS.gene92871.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 40 | 224 | 217 | 407 | 2.86e-17 | 80.9 |
| MS.gene92871.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 61 | 231 | 61 | 218 | 3.38e-12 | 65.9 |
| MS.gene92871.t1 | AT1G71770 | 33.333 | 195 | 116 | 6 | 40 | 224 | 217 | 407 | 2.86e-17 | 80.9 |
| MS.gene92871.t1 | AT1G71770 | 28.070 | 171 | 110 | 3 | 61 | 231 | 61 | 218 | 3.38e-12 | 65.9 |
| MS.gene92871.t1 | AT3G13224 | 29.189 | 185 | 108 | 6 | 57 | 234 | 8 | 176 | 3.75e-17 | 79.7 |
| MS.gene92871.t1 | AT3G14100 | 32.044 | 181 | 109 | 4 | 54 | 234 | 54 | 220 | 1.09e-16 | 78.6 |
| MS.gene92871.t1 | AT3G14100 | 28.022 | 182 | 105 | 3 | 61 | 220 | 146 | 323 | 5.79e-14 | 70.9 |
| MS.gene92871.t1 | AT3G16380 | 31.280 | 211 | 132 | 5 | 32 | 234 | 174 | 379 | 3.23e-16 | 77.4 |
| MS.gene92871.t1 | AT3G16380 | 29.213 | 178 | 108 | 5 | 61 | 234 | 114 | 277 | 3.46e-12 | 65.9 |
| MS.gene92871.t1 | AT3G13224 | 29.885 | 174 | 99 | 6 | 54 | 220 | 14 | 171 | 4.89e-16 | 74.7 |
| MS.gene92871.t1 | AT3G13224 | 28.723 | 188 | 111 | 6 | 54 | 234 | 14 | 185 | 9.85e-16 | 75.5 |
| MS.gene92871.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 61 | 232 | 47 | 206 | 2.06e-15 | 75.5 |
| MS.gene92871.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 61 | 224 | 226 | 392 | 3.04e-13 | 68.9 |
| MS.gene92871.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 52 | 234 | 121 | 299 | 9.53e-12 | 64.7 |
| MS.gene92871.t1 | AT1G49760 | 28.736 | 174 | 108 | 3 | 61 | 232 | 47 | 206 | 2.06e-15 | 75.5 |
| MS.gene92871.t1 | AT1G49760 | 31.361 | 169 | 109 | 3 | 61 | 224 | 226 | 392 | 3.04e-13 | 68.9 |
| MS.gene92871.t1 | AT1G49760 | 28.191 | 188 | 121 | 5 | 52 | 234 | 121 | 299 | 9.53e-12 | 64.7 |
| MS.gene92871.t1 | AT1G54080 | 30.387 | 181 | 112 | 4 | 54 | 234 | 58 | 224 | 2.45e-15 | 74.7 |
| MS.gene92871.t1 | AT1G54080 | 27.320 | 194 | 114 | 4 | 61 | 231 | 150 | 339 | 9.23e-13 | 67.4 |
| MS.gene92871.t1 | AT2G36660 | 30.114 | 176 | 116 | 3 | 61 | 231 | 203 | 376 | 7.20e-15 | 73.6 |
| MS.gene92871.t1 | AT2G36660 | 28.652 | 178 | 115 | 3 | 56 | 233 | 21 | 186 | 8.46e-13 | 67.8 |
| MS.gene92871.t1 | AT4G09040 | 24.790 | 238 | 160 | 5 | 12 | 234 | 33 | 266 | 1.17e-14 | 72.0 |
| MS.gene92871.t1 | AT4G09040 | 26.263 | 198 | 132 | 5 | 41 | 234 | 19 | 206 | 1.18e-14 | 71.2 |
| MS.gene92871.t1 | AT2G23350 | 32.768 | 177 | 110 | 4 | 61 | 231 | 227 | 400 | 1.43e-14 | 72.8 |
| MS.gene92871.t1 | AT2G23350 | 32.402 | 179 | 110 | 5 | 57 | 234 | 132 | 300 | 6.02e-13 | 68.2 |
| MS.gene92871.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 54 | 234 | 49 | 215 | 1.52e-14 | 72.4 |
| MS.gene92871.t1 | AT1G17370 | 26.154 | 195 | 117 | 4 | 61 | 232 | 141 | 331 | 4.45e-14 | 71.2 |
| MS.gene92871.t1 | AT1G17370 | 30.387 | 181 | 112 | 4 | 54 | 234 | 49 | 215 | 1.52e-14 | 72.4 |
| MS.gene92871.t1 | AT1G17370 | 26.562 | 192 | 117 | 4 | 61 | 232 | 141 | 328 | 1.10e-13 | 70.1 |
| MS.gene92871.t1 | AT1G54080 | 30.270 | 185 | 111 | 5 | 54 | 234 | 58 | 228 | 3.05e-14 | 71.6 |
| MS.gene92871.t1 | AT1G54080 | 29.341 | 167 | 91 | 4 | 88 | 231 | 181 | 343 | 2.11e-11 | 63.2 |
| MS.gene92871.t1 | AT4G34110 | 32.768 | 177 | 110 | 5 | 61 | 231 | 217 | 390 | 5.58e-14 | 71.2 |
| MS.gene92871.t1 | AT4G34110 | 30.270 | 185 | 113 | 6 | 56 | 234 | 116 | 290 | 3.60e-13 | 68.6 |
| MS.gene92871.t1 | AT4G34110 | 25.581 | 172 | 116 | 2 | 61 | 232 | 38 | 197 | 1.68e-12 | 66.6 |
| MS.gene92871.t1 | AT2G18510 | 27.429 | 175 | 114 | 2 | 61 | 234 | 27 | 189 | 2.63e-13 | 68.6 |
| MS.gene92871.t1 | AT1G34140 | 32.222 | 180 | 114 | 5 | 61 | 234 | 121 | 298 | 2.92e-13 | 68.6 |
| MS.gene92871.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 159 | 234 | 258 | 333 | 4.94e-13 | 67.8 |
| MS.gene92871.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 60 | 138 | 100 | 178 | 3.14e-12 | 65.5 |
| MS.gene92871.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 60 | 136 | 258 | 334 | 1.27e-11 | 63.5 |
| MS.gene92871.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 159 | 234 | 258 | 333 | 4.94e-13 | 67.8 |
| MS.gene92871.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 60 | 138 | 100 | 178 | 3.14e-12 | 65.5 |
| MS.gene92871.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 60 | 136 | 258 | 334 | 1.27e-11 | 63.5 |
| MS.gene92871.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 159 | 234 | 258 | 333 | 4.94e-13 | 67.8 |
| MS.gene92871.t1 | AT3G53460 | 44.304 | 79 | 44 | 0 | 60 | 138 | 100 | 178 | 3.14e-12 | 65.5 |
| MS.gene92871.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 60 | 136 | 258 | 334 | 1.27e-11 | 63.5 |
| MS.gene92871.t1 | AT3G53460 | 43.421 | 76 | 43 | 0 | 159 | 234 | 279 | 354 | 5.04e-13 | 67.8 |
| MS.gene92871.t1 | AT3G53460 | 38.961 | 77 | 47 | 0 | 60 | 136 | 279 | 355 | 1.42e-11 | 63.5 |
| MS.gene92871.t1 | AT4G13860 | 43.836 | 73 | 41 | 0 | 159 | 231 | 4 | 76 | 1.11e-12 | 62.4 |
| MS.gene92871.t1 | AT4G13860 | 37.333 | 75 | 47 | 0 | 60 | 134 | 4 | 78 | 3.03e-11 | 58.5 |
| MS.gene92871.t1 | AT5G40490 | 25.275 | 182 | 111 | 4 | 60 | 234 | 43 | 206 | 1.35e-12 | 66.6 |
| MS.gene92871.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 58 | 234 | 23 | 193 | 7.05e-11 | 61.6 |
| MS.gene92871.t1 | AT5G19350 | 23.034 | 178 | 129 | 2 | 58 | 234 | 23 | 193 | 7.09e-11 | 61.6 |
Find 43 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAACCTCCCGTTGTTAA+AGG | 0.209315 | 3.4:+20484516 | None:intergenic |
| GTGAGTTAGAGAAAGGAAAT+TGG | 0.272472 | 3.4:+20488240 | None:intergenic |
| GGAAGAAGGTGTTGTCGTTT+TGG | 0.275360 | 3.4:+20488189 | None:intergenic |
| TTTATCAAATGACAGCAAAT+TGG | 0.309582 | 3.4:-20484573 | MS.gene92871:intron |
| TGTTAACTGCAGTTGTTAGA+AGG | 0.327875 | 3.4:-20483328 | MS.gene92871:intron |
| TGTATGATAAATACTCTAAA+AGG | 0.332898 | 3.4:-20484769 | MS.gene92871:CDS |
| GCCAAGGTTTCACGGGTTCC+TGG | 0.336172 | 3.4:-20484369 | MS.gene92871:CDS |
| ACCTCAAAATCCAGTGGTTT+CGG | 0.344689 | 3.4:-20484345 | MS.gene92871:CDS |
| TGAGTTAGAGAAAGGAAATT+GGG | 0.352273 | 3.4:+20488241 | None:intergenic |
| GCAGAAAATCCGAGTGAATA+AGG | 0.353968 | 3.4:-20483305 | MS.gene92871:CDS |
| CAAGGTATATGTGGGAAATC+TGG | 0.373394 | 3.4:-20484454 | MS.gene92871:CDS |
| TTTCCCACATATACCTTGTA+AGG | 0.379798 | 3.4:+20484459 | None:intergenic |
| ACCATGTTCTTGAACAATCT+TGG | 0.384608 | 3.4:+20488036 | None:intergenic |
| CTCTTAGTGCCAAGGTTTCA+CGG | 0.433896 | 3.4:-20484377 | MS.gene92871:CDS |
| CCAAGGTTTCACGGGTTCCT+GGG | 0.476496 | 3.4:-20484368 | MS.gene92871:CDS |
| CAGTCCTTACAAGGTATATG+TGG | 0.478762 | 3.4:-20484463 | MS.gene92871:CDS |
| GCAGATTCCTCGGCTTGGAC+TGG | 0.478978 | 3.4:+20484495 | None:intergenic |
| ATTTGTTGACAGTCCTTACA+AGG | 0.488310 | 3.4:-20484472 | MS.gene92871:CDS |
| GCTGTTAGAAAACTTTATGT+TGG | 0.495068 | 3.4:-20488094 | MS.gene92871:CDS |
| CCCAGGAACCCGTGAAACCT+TGG | 0.513301 | 3.4:+20484368 | None:intergenic |
| CAAATGCAGATTCCTCGGCT+TGG | 0.514673 | 3.4:+20484490 | None:intergenic |
| ATCAAATGACAGCAAATTGG+AGG | 0.524929 | 3.4:-20484570 | MS.gene92871:intron |
| GTCAACAAATGCAGATTCCT+CGG | 0.527366 | 3.4:+20484485 | None:intergenic |
| AAGTGTTGTGAGTTAGAGAA+AGG | 0.537007 | 3.4:+20488233 | None:intergenic |
| AGTAACAAAGCCGAAACCAC+TGG | 0.538663 | 3.4:+20484335 | None:intergenic |
| TCTTAGTGCCAAGGTTTCAC+GGG | 0.544466 | 3.4:-20484376 | MS.gene92871:CDS |
| AGCAAATGCTCTTAGTGCCA+AGG | 0.546104 | 3.4:-20484385 | MS.gene92871:CDS |
| TGCTGCGTTTGCATCCTCAA+CGG | 0.548877 | 3.4:+20484715 | None:intergenic |
| GCCAAGATTGTTCAAGAACA+TGG | 0.550336 | 3.4:-20488037 | MS.gene92871:CDS |
| GTTAACTGCAGTTGTTAGAA+GGG | 0.555240 | 3.4:-20483327 | MS.gene92871:intron |
| TGTTTCTTCTGAACAAGCCA+CGG | 0.601130 | 3.4:-20488128 | MS.gene92871:CDS |
| ACGACGTGTCGTAACGACAA+AGG | 0.604422 | 3.4:+20488168 | None:intergenic |
| GCAGCAGCTGAGAAACTCAA+TGG | 0.608545 | 3.4:-20484698 | MS.gene92871:CDS |
| CGTTACAATGAAAACCGTTG+AGG | 0.618690 | 3.4:-20484729 | MS.gene92871:CDS |
| GTCGTAACGACAAAGGAAGA+AGG | 0.621414 | 3.4:+20488175 | None:intergenic |
| TCAAATGACAGCAAATTGGA+GGG | 0.626420 | 3.4:-20484569 | MS.gene92871:intron |
| GAGTTAGAGAAAGGAAATTG+GGG | 0.630783 | 3.4:+20488242 | None:intergenic |
| AGTCCTTACAAGGTATATGT+GGG | 0.637493 | 3.4:-20484462 | MS.gene92871:CDS |
| CCTGGGACCTCAAAATCCAG+TGG | 0.638570 | 3.4:-20484351 | MS.gene92871:CDS |
| AGGTTTGCCAGTCCAAGCCG+AGG | 0.642807 | 3.4:-20484502 | MS.gene92871:CDS |
| TTGTAACGAATGCAAAACGA+CGG | 0.717874 | 3.4:+20484744 | None:intergenic |
| TCGTCATTACTAACAGTACG+AGG | 0.729772 | 3.4:+20488064 | None:intergenic |
| AACAGCAGGAGAATCAACCG+TGG | 0.770845 | 3.4:+20488111 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACTTAAAAC+AGG | + | chr3.4:20486035-20486054 | None:intergenic | 10.0% |
| !!! | TAAAAAAGTATATTTGAAAA+TGG | - | chr3.4:20485525-20485544 | MS.gene92871:intron | 10.0% |
| !!! | TTAAAAATTCTTTAAAAGTA+AGG | - | chr3.4:20484309-20484328 | MS.gene92871:CDS | 10.0% |
| !! | AAAATAAGTTGTAAAAAACA+AGG | - | chr3.4:20484506-20484525 | MS.gene92871:CDS | 15.0% |
| !! | TTTAAAAGTAAGGTTAAAAT+GGG | - | chr3.4:20484319-20484338 | MS.gene92871:CDS | 15.0% |
| !!! | AAATTAATTTTGGTTGAAAT+GGG | - | chr3.4:20483646-20483665 | MS.gene92871:intron | 15.0% |
| !!! | ATTAACAATTTTCAATTTCA+GGG | + | chr3.4:20487724-20487743 | None:intergenic | 15.0% |
| !!! | ATTATGTTTAATTTTATCAC+AGG | - | chr3.4:20485092-20485111 | MS.gene92871:intron | 15.0% |
| !!! | CTTTTATCATTTTTAATTTG+AGG | - | chr3.4:20485707-20485726 | MS.gene92871:intron | 15.0% |
| !!! | TGATTTTGTGAAATTAATTT+TGG | - | chr3.4:20483636-20483655 | MS.gene92871:intron | 15.0% |
| !!! | TTTTGATATTAATAGAAGTT+GGG | + | chr3.4:20485272-20485291 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGATTGATTCAT+AGG | - | chr3.4:20486767-20486786 | MS.gene92871:intron | 15.0% |
| !! | AAAACATATAAAGAAAGTTG+AGG | + | chr3.4:20486688-20486707 | None:intergenic | 20.0% |
| !! | AATGTAGTATAATAGATTCA+AGG | - | chr3.4:20484536-20484555 | MS.gene92871:CDS | 20.0% |
| !! | ATAACAAAACAAATCAAAGA+AGG | - | chr3.4:20485298-20485317 | MS.gene92871:intron | 20.0% |
| !! | ATAATAGATTCAAGGTAAAA+TGG | - | chr3.4:20484544-20484563 | MS.gene92871:CDS | 20.0% |
| !! | ATATATGTCGAAGAATAAAA+AGG | + | chr3.4:20487523-20487542 | None:intergenic | 20.0% |
| !! | ATCAATACAAGAAAATCATA+TGG | + | chr3.4:20485502-20485521 | None:intergenic | 20.0% |
| !! | GAAATTGAAAATTGTTAATC+TGG | - | chr3.4:20487725-20487744 | MS.gene92871:intron | 20.0% |
| !! | GAATTGAAGTTTGTAAAATT+AGG | - | chr3.4:20484031-20484050 | MS.gene92871:intron | 20.0% |
| !! | GTATTTCATTTAATAAGAGA+AGG | - | chr3.4:20484787-20484806 | MS.gene92871:intron | 20.0% |
| !! | TAATGTTCATTCAACAATTT+AGG | - | chr3.4:20486934-20486953 | MS.gene92871:intron | 20.0% |
| !! | TAATTTCATTTAAGAAGAGA+AGG | - | chr3.4:20484761-20484780 | MS.gene92871:CDS | 20.0% |
| !! | TACAATTTCTATCATGATTT+GGG | - | chr3.4:20488110-20488129 | MS.gene92871:CDS | 20.0% |
| !! | TATAAAACTAAGAAAACTTG+AGG | + | chr3.4:20488027-20488046 | None:intergenic | 20.0% |
| !! | TATATGTCGAAGAATAAAAA+GGG | + | chr3.4:20487522-20487541 | None:intergenic | 20.0% |
| !! | TCAATACAAGAAAATCATAT+GGG | + | chr3.4:20485501-20485520 | None:intergenic | 20.0% |
| !! | TGTATGATAAATACTCTAAA+AGG | - | chr3.4:20486793-20486812 | MS.gene92871:intron | 20.0% |
| !! | TTACAATTTCTATCATGATT+TGG | - | chr3.4:20488109-20488128 | MS.gene92871:CDS | 20.0% |
| !! | TTCAGTATAATTATATGTGT+TGG | - | chr3.4:20483924-20483943 | MS.gene92871:intron | 20.0% |
| !! | TTTGAATAAACTTAGAGTAT+TGG | - | chr3.4:20485749-20485768 | MS.gene92871:intron | 20.0% |
| !!! | AAAAGTATATTTGAAAATGG+TGG | - | chr3.4:20485528-20485547 | MS.gene92871:intron | 20.0% |
| !!! | CTTCATTTTGAAAAATTAAC+TGG | - | chr3.4:20484064-20484083 | MS.gene92871:intron | 20.0% |
| !!! | CTTTAAAAGTAAGGTTAAAA+TGG | - | chr3.4:20484318-20484337 | MS.gene92871:CDS | 20.0% |
| !!! | GAAATTAATTTTGGTTGAAA+TGG | - | chr3.4:20483645-20483664 | MS.gene92871:intron | 20.0% |
| !!! | GATTAACAATTTTCAATTTC+AGG | + | chr3.4:20487725-20487744 | None:intergenic | 20.0% |
| !!! | GTTTTGATATTAATAGAAGT+TGG | + | chr3.4:20485273-20485292 | None:intergenic | 20.0% |
| !!! | TATTGGATTTTTTTTTGTCA+AGG | - | chr3.4:20485766-20485785 | MS.gene92871:intron | 20.0% |
| ! | AAACGAAACCAAATAGATAA+AGG | + | chr3.4:20484883-20484902 | None:intergenic | 25.0% |
| ! | AAAGAATCTAGCATCAAAAT+CGG | + | chr3.4:20485662-20485681 | None:intergenic | 25.0% |
| ! | AACTTGAGGAAAATTATACA+TGG | + | chr3.4:20488013-20488032 | None:intergenic | 25.0% |
| ! | AAGAAAATCATATGGGTTTA+GGG | + | chr3.4:20485494-20485513 | None:intergenic | 25.0% |
| ! | AATAACAATATACACACTCT+TGG | + | chr3.4:20487618-20487637 | None:intergenic | 25.0% |
| ! | ACAATTTCTATCATGATTTG+GGG | - | chr3.4:20488111-20488130 | MS.gene92871:CDS | 25.0% |
| ! | ACTTCAATACAAACATTATC+AGG | - | chr3.4:20484694-20484713 | MS.gene92871:CDS | 25.0% |
| ! | ACTTGAGGAAAATTATACAT+GGG | + | chr3.4:20488012-20488031 | None:intergenic | 25.0% |
| ! | ATCAATCCTAAAAATACCAA+TGG | - | chr3.4:20487777-20487796 | MS.gene92871:intron | 25.0% |
| ! | ATGATGTAAACTGATGATAA+CGG | - | chr3.4:20484128-20484147 | MS.gene92871:intron | 25.0% |
| ! | ATGTAAAGCAACATAGAAAT+GGG | - | chr3.4:20485852-20485871 | MS.gene92871:intron | 25.0% |
| ! | ATGTTAACATATTTGGAGAT+GGG | + | chr3.4:20488086-20488105 | None:intergenic | 25.0% |
| ! | ATTCAAGGTAAAATGGTAAA+TGG | - | chr3.4:20484551-20484570 | MS.gene92871:CDS | 25.0% |
| ! | CAAGATGAAGAAAACATAAA+AGG | + | chr3.4:20485807-20485826 | None:intergenic | 25.0% |
| ! | CAATAAAAGAGTGAATGTTA+TGG | - | chr3.4:20484430-20484449 | MS.gene92871:CDS | 25.0% |
| ! | CACTAAACATAATTTAGCTA+TGG | - | chr3.4:20484634-20484653 | MS.gene92871:intron | 25.0% |
| ! | CATAAGCATTAATGTAGTAA+CGG | - | chr3.4:20486399-20486418 | MS.gene92871:intron | 25.0% |
| ! | GATTTGATAAGAAATCCAAA+CGG | + | chr3.4:20487760-20487779 | None:intergenic | 25.0% |
| ! | GTAAGTCATGTTAACATATT+TGG | + | chr3.4:20488093-20488112 | None:intergenic | 25.0% |
| ! | TAAAATGGTAAATGGAACAA+TGG | - | chr3.4:20484559-20484578 | MS.gene92871:CDS | 25.0% |
| ! | TAAACTTTAAACAGGAAATC+TGG | + | chr3.4:20486089-20486108 | None:intergenic | 25.0% |
| ! | TATAACATTCAGTCTCTTAT+TGG | + | chr3.4:20484406-20484425 | None:intergenic | 25.0% |
| ! | TTTATCAAATGACAGCAAAT+TGG | - | chr3.4:20486989-20487008 | MS.gene92871:intron | 25.0% |
| ! | TTTCAACTCCTTTATCTATT+TGG | - | chr3.4:20484872-20484891 | MS.gene92871:intron | 25.0% |
| !! | ATCTGATTTTCCCATATAAT+TGG | + | chr3.4:20485249-20485268 | None:intergenic | 25.0% |
| !! | ATGAATTTTACCCCTTTATA+AGG | - | chr3.4:20486527-20486546 | MS.gene92871:intron | 25.0% |
| !! | CAATTTAGTTCCAAAAATGT+AGG | + | chr3.4:20487884-20487903 | None:intergenic | 25.0% |
| !! | CACCTTAATTTGGTTAAAAT+GGG | - | chr3.4:20484207-20484226 | MS.gene92871:intron | 25.0% |
| !! | CATAACATTCACTCTTTTAT+TGG | + | chr3.4:20484432-20484451 | None:intergenic | 25.0% |
| !! | GATTTCCTGTTTAAAGTTTA+TGG | - | chr3.4:20486089-20486108 | MS.gene92871:intron | 25.0% |
| !! | TAGCCTTAAAAATTTCTTCT+CGG | - | chr3.4:20487150-20487169 | MS.gene92871:intron | 25.0% |
| !! | TCACCTTAATTTGGTTAAAA+TGG | - | chr3.4:20484206-20484225 | MS.gene92871:intron | 25.0% |
| !! | TCTGATTTTCCCATATAATT+GGG | + | chr3.4:20485248-20485267 | None:intergenic | 25.0% |
| !! | TTTCCGAGAAGAAATTTTTA+AGG | + | chr3.4:20487156-20487175 | None:intergenic | 25.0% |
| !!! | AACCCATTTTAACCAAATTA+AGG | + | chr3.4:20484212-20484231 | None:intergenic | 25.0% |
| !!! | AATATTCTAAAGTGATGCAT+AGG | + | chr3.4:20487832-20487851 | None:intergenic | 25.0% |
| !!! | AATGGGATAATGTTTTTAGT+TGG | - | chr3.4:20485869-20485888 | MS.gene92871:intron | 25.0% |
| !!! | CATTTTTAATTTGAGGAAGT+TGG | - | chr3.4:20485714-20485733 | MS.gene92871:intron | 25.0% |
| !!! | CTTTAGAATATTGATCCTTT+TGG | - | chr3.4:20487840-20487859 | MS.gene92871:intron | 25.0% |
| !!! | GAAGAATAAAAAGGGTATTT+CGG | + | chr3.4:20487514-20487533 | None:intergenic | 25.0% |
| !!! | GATTTCCTGTTTTAAGTTAA+TGG | - | chr3.4:20486063-20486082 | MS.gene92871:intron | 25.0% |
| AACAGTTTCACCTTATAAAG+GGG | + | chr3.4:20486540-20486559 | None:intergenic | 30.0% | |
| AACCGAAAAACCTTTAACAA+CGG | - | chr3.4:20487036-20487055 | MS.gene92871:intron | 30.0% | |
| AAGCTATTCTTGATAGACTA+TGG | + | chr3.4:20486439-20486458 | None:intergenic | 30.0% | |
| AGGATTTATCATAGAACCTA+GGG | - | chr3.4:20486612-20486631 | MS.gene92871:intron | 30.0% | |
| AGTTAACATACAGCAAATGA+AGG | + | chr3.4:20488222-20488241 | None:intergenic | 30.0% | |
| ATAATGAGAGAAGTCTTTAG+TGG | - | chr3.4:20485216-20485235 | MS.gene92871:intron | 30.0% | |
| ATATCAACTTAGACACCAAA+AGG | + | chr3.4:20487858-20487877 | None:intergenic | 30.0% | |
| ATGAGAGCAGATATTTCATT+TGG | + | chr3.4:20487966-20487985 | None:intergenic | 30.0% | |
| CAAGAAAATCATATGGGTTT+AGG | + | chr3.4:20485495-20485514 | None:intergenic | 30.0% | |
| CACAAATGTGATGTTTATGA+GGG | + | chr3.4:20487941-20487960 | None:intergenic | 30.0% | |
| CATGTAAAGCAACATAGAAA+TGG | - | chr3.4:20485851-20485870 | MS.gene92871:intron | 30.0% | |
| CATGTTAACATATTTGGAGA+TGG | + | chr3.4:20488087-20488106 | None:intergenic | 30.0% | |
| CCATTAATATGTGATGCAAA+TGG | + | chr3.4:20486224-20486243 | None:intergenic | 30.0% | |
| CCATTTGCATCACATATTAA+TGG | - | chr3.4:20486221-20486240 | MS.gene92871:intron | 30.0% | |
| CTTTATAAGGTGAAACTGTT+CGG | - | chr3.4:20486540-20486559 | MS.gene92871:intron | 30.0% | |
| GAACAGTTTCACCTTATAAA+GGG | + | chr3.4:20486541-20486560 | None:intergenic | 30.0% | |
| GCTGTTAGAAAACTTTATGT+TGG | - | chr3.4:20483468-20483487 | MS.gene92871:intron | 30.0% | |
| GTCTATCAAGAATAGCTTAA+AGG | - | chr3.4:20486441-20486460 | MS.gene92871:intron | 30.0% | |
| GTTTCAGTTGTTTGTTTAGA+GGG | - | chr3.4:20485552-20485571 | MS.gene92871:intron | 30.0% | |
| TAAAGGGGTAAAATTCATTG+AGG | + | chr3.4:20486525-20486544 | None:intergenic | 30.0% | |
| TAATGAGAGAAGTCTTTAGT+GGG | - | chr3.4:20485217-20485236 | MS.gene92871:intron | 30.0% | |
| TAGGATTTATCATAGAACCT+AGG | - | chr3.4:20486611-20486630 | MS.gene92871:intron | 30.0% | |
| TATTCTTGATAGACTATGGT+AGG | + | chr3.4:20486435-20486454 | None:intergenic | 30.0% | |
| TGAGTTAGAGAAAGGAAATT+GGG | + | chr3.4:20483324-20483343 | None:intergenic | 30.0% | |
| TGTTTCAGTTGTTTGTTTAG+AGG | - | chr3.4:20485551-20485570 | MS.gene92871:intron | 30.0% | |
| TTGTTTGTTTAGAGGGATTT+GGG | - | chr3.4:20485559-20485578 | MS.gene92871:intron | 30.0% | |
| TTTCAGCATGCAAAATAAAC+AGG | + | chr3.4:20487324-20487343 | None:intergenic | 30.0% | |
| ! | AAAATGGGTTTGTTCAATGT+GGG | - | chr3.4:20484222-20484241 | MS.gene92871:intron | 30.0% |
| ! | ACATAAAGTTTTCTAACAGC+AGG | + | chr3.4:20483468-20483487 | None:intergenic | 30.0% |
| ! | ATCACTCCATTGGTATTTTT+AGG | + | chr3.4:20487786-20487805 | None:intergenic | 30.0% |
| ! | CAACAATTTAGGTTTCTGAA+AGG | - | chr3.4:20486945-20486964 | MS.gene92871:intron | 30.0% |
| ! | GAAAAAGTACGAAGAAAACT+TGG | - | chr3.4:20484587-20484606 | MS.gene92871:intron | 30.0% |
| ! | TAAAATGGGTTTGTTCAATG+TGG | - | chr3.4:20484221-20484240 | MS.gene92871:intron | 30.0% |
| ! | TTATTGGCTGAAACTCATAT+GGG | + | chr3.4:20484390-20484409 | None:intergenic | 30.0% |
| ! | TTGATATGGTCCTACATTTT+TGG | - | chr3.4:20487871-20487890 | MS.gene92871:intron | 30.0% |
| ! | TTGTGATTTTGTGATAGATC+TGG | + | chr3.4:20487670-20487689 | None:intergenic | 30.0% |
| ! | TTTTAATGTAACCTTTGCCA+GGG | + | chr3.4:20486356-20486375 | None:intergenic | 30.0% |
| ! | TTTTGTTAGATCTCTTGTAG+GGG | - | chr3.4:20483808-20483827 | MS.gene92871:intron | 30.0% |
| !! | ATTTGCTTATTTCTGTTAGG+GGG | - | chr3.4:20485609-20485628 | MS.gene92871:intron | 30.0% |
| !! | ATTTTAATGTAACCTTTGCC+AGG | + | chr3.4:20486357-20486376 | None:intergenic | 30.0% |
| !! | CATTTCTATGTTGCTTTACA+TGG | + | chr3.4:20485853-20485872 | None:intergenic | 30.0% |
| !! | GATTTGCTTATTTCTGTTAG+GGG | - | chr3.4:20485608-20485627 | MS.gene92871:intron | 30.0% |
| !! | GGATTTGCTTATTTCTGTTA+GGG | - | chr3.4:20485607-20485626 | MS.gene92871:intron | 30.0% |
| !! | GTAATTTGTTTGACCAATAG+CGG | - | chr3.4:20483728-20483747 | MS.gene92871:intron | 30.0% |
| !! | GTTTTGTTAGATCTCTTGTA+GGG | - | chr3.4:20483807-20483826 | MS.gene92871:intron | 30.0% |
| !! | TGGATTTGCTTATTTCTGTT+AGG | - | chr3.4:20485606-20485625 | MS.gene92871:intron | 30.0% |
| !! | TTGTACTTTTTACCAAAGCA+AGG | + | chr3.4:20486004-20486023 | None:intergenic | 30.0% |
| !!! | AGTTTTGTTAGATCTCTTGT+AGG | - | chr3.4:20483806-20483825 | MS.gene92871:intron | 30.0% |
| !!! | TGTTACTTTTTCATCAGATG+AGG | - | chr3.4:20487243-20487262 | MS.gene92871:intron | 30.0% |
| !!! | TTTTGGTGTCTAAGTTGATA+TGG | - | chr3.4:20487857-20487876 | MS.gene92871:intron | 30.0% |
| AACGGCCATAAACTTTAAAC+AGG | + | chr3.4:20486097-20486116 | None:intergenic | 35.0% | |
| AATCAGATTGATCACTCCAT+TGG | + | chr3.4:20487796-20487815 | None:intergenic | 35.0% | |
| ACCATGTTCTTGAACAATCT+TGG | + | chr3.4:20483529-20483548 | None:intergenic | 35.0% | |
| ACCGAAAAACCTTTAACAAC+GGG | - | chr3.4:20487037-20487056 | MS.gene92871:intron | 35.0% | |
| AGCATGCAAAATAAACAGGA+AGG | + | chr3.4:20487320-20487339 | None:intergenic | 35.0% | |
| AGTACGAAGAAAACTTGGTT+TGG | - | chr3.4:20484592-20484611 | MS.gene92871:intron | 35.0% | |
| AGTCCTTACAAGGTATATGT+GGG | - | chr3.4:20487100-20487119 | MS.gene92871:intron | 35.0% | |
| ATCAAATGACAGCAAATTGG+AGG | - | chr3.4:20486992-20487011 | MS.gene92871:intron | 35.0% | |
| ATCATCATCATCATCAAGCA+AGG | + | chr3.4:20487397-20487416 | None:intergenic | 35.0% | |
| ATCTTGTCTTGCAAACCAAA+AGG | + | chr3.4:20486124-20486143 | None:intergenic | 35.0% | |
| ATTTGGGGACTCTATTCAAT+GGG | - | chr3.4:20488126-20488145 | MS.gene92871:CDS | 35.0% | |
| CAGAATGGGTATGTAATTGA+TGG | + | chr3.4:20487646-20487665 | None:intergenic | 35.0% | |
| CCACAAATGTGATGTTTATG+AGG | + | chr3.4:20487942-20487961 | None:intergenic | 35.0% | |
| CCTCATAAACATCACATTTG+TGG | - | chr3.4:20487939-20487958 | MS.gene92871:intron | 35.0% | |
| CCTTCAGCAAAAAAAGTTGA+GGG | + | chr3.4:20485174-20485193 | None:intergenic | 35.0% | |
| CGAACAGTTTCACCTTATAA+AGG | + | chr3.4:20486542-20486561 | None:intergenic | 35.0% | |
| CTATCACGAACAAAACTCTT+GGG | - | chr3.4:20484172-20484191 | MS.gene92871:intron | 35.0% | |
| CTCTTTGTAAATGATCACAC+AGG | + | chr3.4:20484943-20484962 | None:intergenic | 35.0% | |
| CTGTGTGATCATTTACAAAG+AGG | - | chr3.4:20484941-20484960 | MS.gene92871:intron | 35.0% | |
| CTTGATGCTCTCAATATTTG+TGG | + | chr3.4:20486724-20486743 | None:intergenic | 35.0% | |
| GAGTTAGAGAAAGGAAATTG+GGG | + | chr3.4:20483323-20483342 | None:intergenic | 35.0% | |
| GCACACTTAAGAATGTAAAG+TGG | - | chr3.4:20484359-20484378 | MS.gene92871:CDS | 35.0% | |
| GCATGCAAAATAAACAGGAA+GGG | + | chr3.4:20487319-20487338 | None:intergenic | 35.0% | |
| GGTGAGTGTTAGAAAGAAAA+TGG | - | chr3.4:20484451-20484470 | MS.gene92871:CDS | 35.0% | |
| GTCTTGAATTAGAACCTTAC+AGG | - | chr3.4:20484979-20484998 | MS.gene92871:intron | 35.0% | |
| GTGAGTTAGAGAAAGGAAAT+TGG | + | chr3.4:20483325-20483344 | None:intergenic | 35.0% | |
| GTTAACTGCAGTTGTTAGAA+GGG | - | chr3.4:20488235-20488254 | MS.gene92871:CDS | 35.0% | |
| GTTGTTTGTTTAGAGGGATT+TGG | - | chr3.4:20485558-20485577 | MS.gene92871:intron | 35.0% | |
| GTTTGGAGAAGTAACTCTAA+TGG | + | chr3.4:20487375-20487394 | None:intergenic | 35.0% | |
| TCAAATGACAGCAAATTGGA+GGG | - | chr3.4:20486993-20487012 | MS.gene92871:intron | 35.0% | |
| TCTGGCCATTAACTTAAAAC+AGG | + | chr3.4:20486071-20486090 | None:intergenic | 35.0% | |
| TCTTGTCTTGCAAACCAAAA+GGG | + | chr3.4:20486123-20486142 | None:intergenic | 35.0% | |
| TGATAAGAAATCCAAACGGA+GGG | + | chr3.4:20487756-20487775 | None:intergenic | 35.0% | |
| TGCAAACCAAAAGGGATAAA+CGG | + | chr3.4:20486115-20486134 | None:intergenic | 35.0% | |
| TGGGTATGTAATTGATGGAA+TGG | + | chr3.4:20487641-20487660 | None:intergenic | 35.0% | |
| TGTACTGAACAATGCAATGT+AGG | - | chr3.4:20486592-20486611 | MS.gene92871:intron | 35.0% | |
| TGTTAACTGCAGTTGTTAGA+AGG | - | chr3.4:20488234-20488253 | MS.gene92871:CDS | 35.0% | |
| TTGATAAGAAATCCAAACGG+AGG | + | chr3.4:20487757-20487776 | None:intergenic | 35.0% | |
| TTGTAACGAATGCAAAACGA+CGG | + | chr3.4:20486821-20486840 | None:intergenic | 35.0% | |
| TTTCCCACATATACCTTGTA+AGG | + | chr3.4:20487106-20487125 | None:intergenic | 35.0% | |
| ! | AAGTGTTGTGAGTTAGAGAA+AGG | + | chr3.4:20483332-20483351 | None:intergenic | 35.0% |
| ! | ACCGTCTCTTAACTTGAATT+CGG | - | chr3.4:20485422-20485441 | MS.gene92871:intron | 35.0% |
| ! | ATTTGTTGACAGTCCTTACA+AGG | - | chr3.4:20487090-20487109 | MS.gene92871:intron | 35.0% |
| ! | CTTATTGGCTGAAACTCATA+TGG | + | chr3.4:20484391-20484410 | None:intergenic | 35.0% |
| ! | TCCCGTTGTTAAAGGTTTTT+CGG | + | chr3.4:20487041-20487060 | None:intergenic | 35.0% |
| ! | TGGTTTGCAAGACAAGATTA+AGG | - | chr3.4:20486126-20486145 | MS.gene92871:intron | 35.0% |
| ! | TTAGCACTGAAGTGTTTGAA+TGG | - | chr3.4:20485586-20485605 | MS.gene92871:intron | 35.0% |
| !! | AAAGCTGAGGTACTTTTTGT+TGG | - | chr3.4:20483558-20483577 | MS.gene92871:intron | 35.0% |
| !! | AGAAAACTTGGTTTGGCTAA+TGG | - | chr3.4:20484599-20484618 | MS.gene92871:intron | 35.0% |
| !! | GTAAACTGATGATAACGGAT+TGG | - | chr3.4:20484133-20484152 | MS.gene92871:intron | 35.0% |
| !! | GTATTATGCTGCTACTTTCA+TGG | - | chr3.4:20485974-20485993 | MS.gene92871:intron | 35.0% |
| !! | TATATGTGTTGGTGTTGTGT+CGG | - | chr3.4:20483935-20483954 | MS.gene92871:intron | 35.0% |
| !! | TGGGAAGTACCCAATTATAT+GGG | - | chr3.4:20485236-20485255 | MS.gene92871:intron | 35.0% |
| !!! | TGTTGTCGTTTTGGGTTTTA+AGG | + | chr3.4:20483367-20483386 | None:intergenic | 35.0% |
| ACCATTTGTGTGACAACTTG+CGG | - | chr3.4:20487583-20487602 | MS.gene92871:intron | 40.0% | |
| ACCTCAAAATCCAGTGGTTT+CGG | - | chr3.4:20487217-20487236 | MS.gene92871:intron | 40.0% | |
| AGAGGAAGAGGATAAAGAAG+AGG | + | chr3.4:20485395-20485414 | None:intergenic | 40.0% | |
| AGCAAAAAAAGTTGAGGGAG+AGG | + | chr3.4:20485169-20485188 | None:intergenic | 40.0% | |
| ATTTGAAAGATCTCTCACCG+CGG | + | chr3.4:20485455-20485474 | None:intergenic | 40.0% | |
| ATTTGTTTGACCAATAGCGG+TGG | - | chr3.4:20483731-20483750 | MS.gene92871:intron | 40.0% | |
| CAAGGTATATGTGGGAAATC+TGG | - | chr3.4:20487108-20487127 | MS.gene92871:intron | 40.0% | |
| CACACATCATATCCAATCCA+TGG | + | chr3.4:20485955-20485974 | None:intergenic | 40.0% | |
| CAGTCCTTACAAGGTATATG+TGG | - | chr3.4:20487099-20487118 | MS.gene92871:intron | 40.0% | |
| CATAGACTAATCTCTCATGC+CGG | + | chr3.4:20483990-20484009 | None:intergenic | 40.0% | |
| CATCATCATCAAGCAAGGTT+TGG | + | chr3.4:20487392-20487411 | None:intergenic | 40.0% | |
| CCATGTACTTGAAGTGTATC+AGG | + | chr3.4:20487350-20487369 | None:intergenic | 40.0% | |
| CCTATCACGAACAAAACTCT+TGG | - | chr3.4:20484171-20484190 | MS.gene92871:intron | 40.0% | |
| CCTGATACACTTCAAGTACA+TGG | - | chr3.4:20487347-20487366 | MS.gene92871:intron | 40.0% | |
| CGTTACAATGAAAACCGTTG+AGG | - | chr3.4:20486833-20486852 | MS.gene92871:intron | 40.0% | |
| CTTGCTTATTTAGTCTGCTG+AGG | + | chr3.4:20485018-20485037 | None:intergenic | 40.0% | |
| GAAAAACCTTTAACAACGGG+AGG | - | chr3.4:20487040-20487059 | MS.gene92871:intron | 40.0% | |
| GATTTGGGGACTCTATTCAA+TGG | - | chr3.4:20488125-20488144 | MS.gene92871:CDS | 40.0% | |
| GCAAAAAAAGTTGAGGGAGA+GGG | + | chr3.4:20485168-20485187 | None:intergenic | 40.0% | |
| GCAGAAAATCCGAGTGAATA+AGG | - | chr3.4:20488257-20488276 | MS.gene92871:CDS | 40.0% | |
| GCATCACATATTAATGGTGC+TGG | - | chr3.4:20486227-20486246 | MS.gene92871:intron | 40.0% | |
| GCCAAGATTGTTCAAGAACA+TGG | - | chr3.4:20483525-20483544 | MS.gene92871:intron | 40.0% | |
| GCCTTCAGCAAAAAAAGTTG+AGG | + | chr3.4:20485175-20485194 | None:intergenic | 40.0% | |
| GTCAACAAATGCAGATTCCT+CGG | + | chr3.4:20487080-20487099 | None:intergenic | 40.0% | |
| GTGATAGATCTGGTCAGAAT+GGG | + | chr3.4:20487660-20487679 | None:intergenic | 40.0% | |
| TAAGAGACGGTAAGAGAAAG+AGG | + | chr3.4:20485413-20485432 | None:intergenic | 40.0% | |
| TAATGTAGTAACGGTGAGTC+AGG | - | chr3.4:20486408-20486427 | MS.gene92871:intron | 40.0% | |
| TATAAGGTGAAACTGTTCGG+TGG | - | chr3.4:20486543-20486562 | MS.gene92871:intron | 40.0% | |
| TATGAGGGAACTTGTGATGA+CGG | + | chr3.4:20487926-20487945 | None:intergenic | 40.0% | |
| TCGTCATTACTAACAGTACG+AGG | + | chr3.4:20483501-20483520 | None:intergenic | 40.0% | |
| TCTGCTGAGGATTTCTAATG+CGG | + | chr3.4:20485005-20485024 | None:intergenic | 40.0% | |
| TGCTGAAGGCAGAAAGAAAT+GGG | - | chr3.4:20485185-20485204 | MS.gene92871:intron | 40.0% | |
| TGTATCCATGCTTCATTGAG+CGG | + | chr3.4:20483840-20483859 | None:intergenic | 40.0% | |
| TGTGATAGATCTGGTCAGAA+TGG | + | chr3.4:20487661-20487680 | None:intergenic | 40.0% | |
| TGTTTCTTCTGAACAAGCCA+CGG | - | chr3.4:20483434-20483453 | MS.gene92871:intron | 40.0% | |
| TTGCTGAAGGCAGAAAGAAA+TGG | - | chr3.4:20485184-20485203 | MS.gene92871:intron | 40.0% | |
| TTTCATGGAGAACCTTGCTT+TGG | - | chr3.4:20485989-20486008 | MS.gene92871:intron | 40.0% | |
| ! | CCCGAATTCAAGTTAAGAGA+CGG | + | chr3.4:20485426-20485445 | None:intergenic | 40.0% |
| ! | CCGTCTCTTAACTTGAATTC+GGG | - | chr3.4:20485423-20485442 | MS.gene92871:intron | 40.0% |
| ! | GTGGAGTGTTCACCTTAATT+TGG | - | chr3.4:20484197-20484216 | MS.gene92871:intron | 40.0% |
| ! | TTATCACAGGAGTGCATTGT+AGG | - | chr3.4:20485105-20485124 | MS.gene92871:intron | 40.0% |
| ! | TTATGGCCGTTTATCCCTTT+TGG | - | chr3.4:20486106-20486125 | MS.gene92871:intron | 40.0% |
| ! | TTGAATTCGGGTATTTTCCG+CGG | - | chr3.4:20485435-20485454 | MS.gene92871:intron | 40.0% |
| !! | AACGGATTGGATGTTGGATT+GGG | - | chr3.4:20484146-20484165 | MS.gene92871:intron | 40.0% |
| !! | ATTATACATGGGCATCGACA+AGG | + | chr3.4:20488001-20488020 | None:intergenic | 40.0% |
| !! | GATGATAACGGATTGGATGT+TGG | - | chr3.4:20484140-20484159 | MS.gene92871:intron | 40.0% |
| !! | GTGGGAAGTACCCAATTATA+TGG | - | chr3.4:20485235-20485254 | MS.gene92871:intron | 40.0% |
| !! | TAACGGATTGGATGTTGGAT+TGG | - | chr3.4:20484145-20484164 | MS.gene92871:intron | 40.0% |
| !! | TGGTTTGGCTAATGGACTTA+AGG | - | chr3.4:20484607-20484626 | MS.gene92871:intron | 40.0% |
| !!! | CCAAGAGTTTTGTTCGTGAT+AGG | + | chr3.4:20484174-20484193 | None:intergenic | 40.0% |
| !!! | CCCTCAACTTTTTTTGCTGA+AGG | - | chr3.4:20485171-20485190 | MS.gene92871:intron | 40.0% |
| !!! | GAAGAAGGTGTTGTCGTTTT+GGG | + | chr3.4:20483375-20483394 | None:intergenic | 40.0% |
| AAGAAATCCAAACGGAGGGA+CGG | + | chr3.4:20487752-20487771 | None:intergenic | 45.0% | |
| ACGGTAAGAGAAAGAGGAAG+AGG | + | chr3.4:20485407-20485426 | None:intergenic | 45.0% | |
| AGCAAATGCTCTTAGTGCCA+AGG | - | chr3.4:20487177-20487196 | MS.gene92871:intron | 45.0% | |
| AGTAACAAAGCCGAAACCAC+TGG | + | chr3.4:20487230-20487249 | None:intergenic | 45.0% | |
| ATACCAAAGCCAAACCCCTT+TGG | + | chr3.4:20485357-20485376 | None:intergenic | 45.0% | |
| CATCGACAAGGAGACAGAAA+GGG | + | chr3.4:20487989-20488008 | None:intergenic | 45.0% | |
| CGAACAAAACTCTTGGGTAG+TGG | - | chr3.4:20484178-20484197 | MS.gene92871:intron | 45.0% | |
| CTCGTATCGTATCCATGGAT+TGG | - | chr3.4:20485940-20485959 | MS.gene92871:intron | 45.0% | |
| CTCTTAGTGCCAAGGTTTCA+CGG | - | chr3.4:20487185-20487204 | MS.gene92871:intron | 45.0% | |
| CTGTACTCGTATCGTATCCA+TGG | - | chr3.4:20485935-20485954 | MS.gene92871:intron | 45.0% | |
| GAATTCGAATCCAGAACCTC+CGG | + | chr3.4:20483773-20483792 | None:intergenic | 45.0% | |
| GATTTCTAATGCGGCCTGTA+AGG | + | chr3.4:20484996-20485015 | None:intergenic | 45.0% | |
| GTCGTAACGACAAAGGAAGA+AGG | + | chr3.4:20483390-20483409 | None:intergenic | 45.0% | |
| GTTAGTATCACTGTCGTGTC+CGG | + | chr3.4:20483867-20483886 | None:intergenic | 45.0% | |
| TCCGCAAGTTGTCACACAAA+TGG | + | chr3.4:20487587-20487606 | None:intergenic | 45.0% | |
| TCTTAGTGCCAAGGTTTCAC+GGG | - | chr3.4:20487186-20487205 | MS.gene92871:intron | 45.0% | |
| TGAAGCATGGATACAGACAC+CGG | - | chr3.4:20483845-20483864 | MS.gene92871:intron | 45.0% | |
| TGCTGTTCTCATTCTCAGAG+TGG | - | chr3.4:20484726-20484745 | MS.gene92871:CDS | 45.0% | |
| ! | ACCTAGGGATATGAGTTGAC+AGG | - | chr3.4:20486627-20486646 | MS.gene92871:intron | 45.0% |
| ! | CCACACTCTTTTCTCCAAAG+GGG | - | chr3.4:20485340-20485359 | MS.gene92871:intron | 45.0% |
| ! | CCTAGGGATATGAGTTGACA+GGG | - | chr3.4:20486628-20486647 | MS.gene92871:intron | 45.0% |
| ! | CCTCTCATTGTTGTTCTAGC+CGG | - | chr3.4:20483968-20483987 | MS.gene92871:intron | 45.0% |
| ! | CTAGGGATATGAGTTGACAG+GGG | - | chr3.4:20486629-20486648 | MS.gene92871:intron | 45.0% |
| ! | CTCTTTTCTCCAAAGGGGTT+TGG | - | chr3.4:20485345-20485364 | MS.gene92871:intron | 45.0% |
| ! | CTTTGGAGAAAAGAGTGTGG+CGG | + | chr3.4:20485340-20485359 | None:intergenic | 45.0% |
| ! | GCCACACTCTTTTCTCCAAA+GGG | - | chr3.4:20485339-20485358 | MS.gene92871:intron | 45.0% |
| !! | GCTTATTTCTGTTAGGGGGA+GGG | - | chr3.4:20485613-20485632 | MS.gene92871:intron | 45.0% |
| !! | TGCTTATTTCTGTTAGGGGG+AGG | - | chr3.4:20485612-20485631 | MS.gene92871:intron | 45.0% |
| !! | TGGTGCTGTTGAAAAAGCTG+AGG | - | chr3.4:20483545-20483564 | MS.gene92871:intron | 45.0% |
| !!! | GGAAGAAGGTGTTGTCGTTT+TGG | + | chr3.4:20483376-20483395 | None:intergenic | 45.0% |
| AACAGCAGGAGAATCAACCG+TGG | + | chr3.4:20483454-20483473 | None:intergenic | 50.0% | |
| AACCTCCGGTTAAGCTGGAA+CGG | + | chr3.4:20483759-20483778 | None:intergenic | 50.0% | |
| ACGACGTGTCGTAACGACAA+AGG | + | chr3.4:20483397-20483416 | None:intergenic | 50.0% | |
| AGATATGACCGTGGTGCGAA+TGG | + | chr3.4:20486164-20486183 | None:intergenic | 50.0% | |
| AGTGGCTGGTAGTCATGTTG+AGG | - | chr3.4:20486198-20486217 | MS.gene92871:intron | 50.0% | |
| ATCTCTGTGGCGTGAAACAG+TGG | - | chr3.4:20486180-20486199 | MS.gene92871:intron | 50.0% | |
| CAAATGCAGATTCCTCGGCT+TGG | + | chr3.4:20487075-20487094 | None:intergenic | 50.0% | |
| CCCTGTCAACTCATATCCCT+AGG | + | chr3.4:20486631-20486650 | None:intergenic | 50.0% | |
| CCGGCTAGAACAACAATGAG+AGG | + | chr3.4:20483971-20483990 | None:intergenic | 50.0% | |
| CTTTGCCAGGGAGACAAAAC+AGG | + | chr3.4:20486344-20486363 | None:intergenic | 50.0% | |
| GCAGCAGCTGAGAAACTCAA+TGG | - | chr3.4:20486864-20486883 | MS.gene92871:intron | 50.0% | |
| GGCAAACCTCCCGTTGTTAA+AGG | + | chr3.4:20487049-20487068 | None:intergenic | 50.0% | |
| GTTTGCCGCTCAATGAAGCA+TGG | - | chr3.4:20483832-20483851 | MS.gene92871:intron | 50.0% | |
| TGCTGCGTTTGCATCCTCAA+CGG | + | chr3.4:20486850-20486869 | None:intergenic | 50.0% | |
| TGGTTCCGTTCCAGCTTAAC+CGG | - | chr3.4:20483751-20483770 | MS.gene92871:intron | 50.0% | |
| ! | ACAGGAGTGCATTGTAGGTG+TGG | - | chr3.4:20485110-20485129 | MS.gene92871:intron | 50.0% |
| ! | CCCCTTTGGAGAAAAGAGTG+TGG | + | chr3.4:20485343-20485362 | None:intergenic | 50.0% |
| ! | CGCCACACTCTTTTCTCCAA+AGG | - | chr3.4:20485338-20485357 | MS.gene92871:intron | 50.0% |
| ! | CTGTTCGGTGGAATGACTAC+AGG | - | chr3.4:20486555-20486574 | MS.gene92871:intron | 50.0% |
| ! | CTGTTTTGTCTCCCTGGCAA+AGG | - | chr3.4:20486342-20486361 | MS.gene92871:intron | 50.0% |
| ! | GCATCGACAAGGAGACAGAA+AGG | + | chr3.4:20487990-20488009 | None:intergenic | 50.0% |
| ! | GCCGAAACCACTGGATTTTG+AGG | + | chr3.4:20487221-20487240 | None:intergenic | 50.0% |
| ! | TCTCCAAAGGGGTTTGGCTT+TGG | - | chr3.4:20485351-20485370 | MS.gene92871:intron | 50.0% |
| !! | CAAAAGTGCCATTCGCACCA+CGG | - | chr3.4:20486153-20486172 | MS.gene92871:intron | 50.0% |
| ACGCCACAGAGATATGACCG+TGG | + | chr3.4:20486173-20486192 | None:intergenic | 55.0% | |
| CCAAGGTTTCACGGGTTCCT+GGG | - | chr3.4:20487194-20487213 | MS.gene92871:intron | 55.0% | |
| CCTGGGACCTCAAAATCCAG+TGG | - | chr3.4:20487211-20487230 | MS.gene92871:intron | 55.0% | |
| GCACCACGGTCATATCTCTG+TGG | - | chr3.4:20486167-20486186 | MS.gene92871:intron | 55.0% | |
| GGAGTGCATTGTAGGTGTGG+TGG | - | chr3.4:20485113-20485132 | MS.gene92871:intron | 55.0% | |
| TCCAGAACCTCCGGTTAAGC+TGG | + | chr3.4:20483764-20483783 | None:intergenic | 55.0% | |
| TCCAGCTTAACCGGAGGTTC+TGG | - | chr3.4:20483760-20483779 | MS.gene92871:intron | 55.0% | |
| TGGAACGGAACCACCGCTAT+TGG | + | chr3.4:20483744-20483763 | None:intergenic | 55.0% | |
| TGGTGCAGCACTCAGTTCTG+CGG | - | chr3.4:20486247-20486266 | MS.gene92871:intron | 55.0% | |
| TTCCGTTCCAGCTTAACCGG+AGG | - | chr3.4:20483754-20483773 | MS.gene92871:intron | 55.0% | |
| ! | CGTGTCCTGTTTTGTCTCCC+TGG | - | chr3.4:20486336-20486355 | MS.gene92871:intron | 55.0% |
| !!! | CCACTGGATTTTGAGGTCCC+AGG | + | chr3.4:20487214-20487233 | None:intergenic | 55.0% |
| AGGTTTGCCAGTCCAAGCCG+AGG | - | chr3.4:20487060-20487079 | MS.gene92871:intron | 60.0% | |
| ATCTGGTCCGTCCCTCCGTT+TGG | - | chr3.4:20487742-20487761 | MS.gene92871:intron | 60.0% | |
| CCCAGGAACCCGTGAAACCT+TGG | + | chr3.4:20487197-20487216 | None:intergenic | 60.0% | |
| CTGTGGCGTGAAACAGTGGC+TGG | - | chr3.4:20486184-20486203 | MS.gene92871:intron | 60.0% | |
| GCAGCACTCAGTTCTGCGGA+AGG | - | chr3.4:20486251-20486270 | MS.gene92871:intron | 60.0% | |
| GCCAAGGTTTCACGGGTTCC+TGG | - | chr3.4:20487193-20487212 | MS.gene92871:intron | 60.0% | |
| !! | GCAGATTCCTCGGCTTGGAC+TGG | + | chr3.4:20487070-20487089 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 20483300 | 20488284 | 20483300 | ID=MS.gene92871 |
| chr3.4 | mRNA | 20483300 | 20488284 | 20483300 | ID=MS.gene92871.t1;Parent=MS.gene92871 |
| chr3.4 | exon | 20488018 | 20488284 | 20488018 | ID=MS.gene92871.t1.exon1;Parent=MS.gene92871.t1 |
| chr3.4 | CDS | 20488018 | 20488284 | 20488018 | ID=cds.MS.gene92871.t1;Parent=MS.gene92871.t1 |
| chr3.4 | exon | 20484694 | 20484795 | 20484694 | ID=MS.gene92871.t1.exon2;Parent=MS.gene92871.t1 |
| chr3.4 | CDS | 20484694 | 20484795 | 20484694 | ID=cds.MS.gene92871.t1;Parent=MS.gene92871.t1 |
| chr3.4 | exon | 20484284 | 20484580 | 20484284 | ID=MS.gene92871.t1.exon3;Parent=MS.gene92871.t1 |
| chr3.4 | CDS | 20484284 | 20484580 | 20484284 | ID=cds.MS.gene92871.t1;Parent=MS.gene92871.t1 |
| chr3.4 | exon | 20483300 | 20483338 | 20483300 | ID=MS.gene92871.t1.exon4;Parent=MS.gene92871.t1 |
| chr3.4 | CDS | 20483300 | 20483338 | 20483300 | ID=cds.MS.gene92871.t1;Parent=MS.gene92871.t1 |
| Gene Sequence |
| Protein sequence |
