AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene87159


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87159.t1 MTR_7g035310 89.412 255 25 1 1 255 1 253 2.58e-165 457
MS.gene87159.t1 MTR_7g035310 88.341 223 24 1 1 223 1 221 1.11e-140 394
MS.gene87159.t1 MTR_4g011040 31.953 169 98 2 66 217 82 250 2.40e-23 95.9
MS.gene87159.t1 MTR_2g103430 28.708 209 131 3 27 218 33 240 1.19e-20 88.2
MS.gene87159.t1 MTR_2g103420 32.515 163 93 2 65 210 81 243 2.18e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene87159.t1 AT5G14660 66.949 236 73 2 19 254 42 272 6.11e-111 320
MS.gene87159.t1 AT5G14660 66.949 236 73 2 19 254 42 272 6.11e-111 320
MS.gene87159.t1 AT5G14660 66.949 236 73 2 19 254 42 272 6.11e-111 320
MS.gene87159.t1 AT1G15390 33.918 171 96 3 64 217 82 252 8.73e-24 97.1

Find 56 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGGTCCCTTCTGGTTT+TGG 0.217039 7.4:+63982231 MS.gene87159:CDS
AGGAATTAATGTTCAACTTA+TGG 0.242265 7.4:+63979222 MS.gene87159:CDS
TAGTATTCGTGGACAGTTAC+AGG 0.295514 7.4:+63981382 MS.gene87159:CDS
GCATCAATCTTCACAGATTC+TGG 0.306156 7.4:-63980044 None:intergenic
ATTGAGTATTTACTAACTCT+TGG 0.377226 7.4:-63979298 None:intergenic
TTCTACAGAACTGATGGTAT+TGG 0.377239 7.4:+63979181 MS.gene87159:intron
TTTCCTCATACTTCATTTCA+AGG 0.393212 7.4:-63982164 None:intergenic
TTGAGTATTTACTAACTCTT+GGG 0.412246 7.4:-63979297 None:intergenic
GTCAGGTGGAAGAAGCGGTT+TGG 0.443345 7.4:-63976771 None:intergenic
TTGAACATTAATTCCTACTT+GGG 0.445401 7.4:-63979215 None:intergenic
AACCCTCATTGAAGAGTGTT+CGG 0.455481 7.4:-63979324 None:intergenic
AAAAGCGGACTTGGTGCGGC+TGG 0.456550 7.4:-63976805 None:intergenic
GTTGAACATTAATTCCTACT+TGG 0.459640 7.4:-63979216 None:intergenic
CAAGTGCAGAACAGCGGTGG+TGG 0.467569 7.4:-63976740 None:intergenic
AATATCCAGACCCCAAGTTA+AGG 0.468504 7.4:+63976985 MS.gene87159:CDS
GGACTTGGTGCGGCTGGAGG+AGG 0.469407 7.4:-63976799 None:intergenic
CCTTCACCACGTTCGCCTAC+CGG 0.476721 7.4:-63979253 None:intergenic
CAGTCATTCTCTCAAAGAAA+AGG 0.478584 7.4:-63981346 None:intergenic
GAAGTTCTTGATAGTATTCG+TGG 0.485870 7.4:+63981371 MS.gene87159:CDS
CGGCATTAATGCTGACGTAA+AGG 0.490802 7.4:+63979360 MS.gene87159:CDS
TCATGTTGAAATATCCGTGC+TGG 0.495228 7.4:-63980113 None:intergenic
AGAACAAGAAAGGTCCCTTC+TGG 0.507355 7.4:+63982225 MS.gene87159:CDS
TTTACGTCAGCATTAATGCC+GGG 0.511687 7.4:-63979358 None:intergenic
GGCCCTTGAAATGAAGTATG+AGG 0.512810 7.4:+63982161 MS.gene87159:intron
TTCCTCATACTTCATTTCAA+GGG 0.514907 7.4:-63982163 None:intergenic
AGAAAGTCGCAGAACAAGAA+AGG 0.519818 7.4:+63982215 MS.gene87159:CDS
ACATGAATTTGACCATCTAC+AGG 0.526666 7.4:+63980130 MS.gene87159:CDS
GGCTGGAGGAGGAGATAGTC+AGG 0.526868 7.4:-63976788 None:intergenic
TTTCTTAAGATTATCATCAA+AGG 0.537118 7.4:-63977030 None:intergenic
CTTTACGTCAGCATTAATGC+CGG 0.542608 7.4:-63979359 None:intergenic
AGCGGACTTGGTGCGGCTGG+AGG 0.547910 7.4:-63976802 None:intergenic
ATGAAGTATGAGGAAATGAC+TGG 0.549132 7.4:+63982171 MS.gene87159:CDS
CCGGTAGGCGAACGTGGTGA+AGG 0.552415 7.4:+63979253 MS.gene87159:CDS
CAGAACAGCGGTGGTGGTGT+TGG 0.560731 7.4:-63976734 None:intergenic
GAGGGTTGTCTATCTTTCCC+CGG 0.565473 7.4:+63979340 MS.gene87159:CDS
TTCAATCCGGTAGGCGAACG+TGG 0.572000 7.4:+63979247 MS.gene87159:CDS
GTGGAAGAAGCGGTTTGGAA+TGG 0.573783 7.4:-63976766 None:intergenic
TAATGATGAAGAAGATGACT+TGG 0.576162 7.4:-63976711 None:intergenic
AGATAGTCAGGTGGAAGAAG+CGG 0.589249 7.4:-63976776 None:intergenic
GATTGATGCACGTGATGTCA+AGG 0.593167 7.4:+63980058 MS.gene87159:CDS
GGTCTTTCAGCACCCCAAGT+AGG 0.597078 7.4:+63979202 MS.gene87159:CDS
CATGATTTCCCAAAACCAGA+AGG 0.597253 7.4:-63982240 None:intergenic
CACGTGATGTCAAGGGAACA+CGG 0.600242 7.4:+63980066 MS.gene87159:CDS
GTTTGTCTGGCCTTCCAGCA+CGG 0.600965 7.4:+63980099 MS.gene87159:CDS
CAGCAAGTGCAGAACAGCGG+TGG 0.606678 7.4:-63976743 None:intergenic
GTTGAAATATCCGTGCTGGA+AGG 0.611276 7.4:-63980109 None:intergenic
TGAACATTAATTCCTACTTG+GGG 0.618628 7.4:-63979214 None:intergenic
AATGATGAAGAAGATGACTT+GGG 0.622365 7.4:-63976710 None:intergenic
AACCGAACACTCTTCAATGA+GGG 0.628227 7.4:+63979322 MS.gene87159:CDS
ATTGATGCACGTGATGTCAA+GGG 0.634587 7.4:+63980059 MS.gene87159:CDS
GATGAAGAAGATGACTTGGG+AGG 0.636397 7.4:-63976707 None:intergenic
GAACCGAACACTCTTCAATG+AGG 0.639867 7.4:+63979321 MS.gene87159:CDS
TTACGTCAGCATTAATGCCG+GGG 0.640683 7.4:-63979357 None:intergenic
ATGATTTCCCAAAACCAGAA+GGG 0.648338 7.4:-63982239 None:intergenic
TGGCAGCAAGTGCAGAACAG+CGG 0.685500 7.4:-63976746 None:intergenic
TGGAGGAGGAGATAGTCAGG+TGG 0.738771 7.4:-63976785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTACAAAATAAATCAAAA+AGG - chr7.4:63979791-63979810 None:intergenic 10.0%
!!! AATATGATTTTGTATTAATT+AGG - chr7.4:63981194-63981213 None:intergenic 10.0%
!!! ATATGATTTTGTATTAATTA+GGG - chr7.4:63981193-63981212 None:intergenic 10.0%
!!! ATTTTTCTTATTAAGATTAA+AGG - chr7.4:63977733-63977752 None:intergenic 10.0%
!!! TTTTTCTTATTAAGATTAAA+GGG - chr7.4:63977732-63977751 None:intergenic 10.0%
!! AAAATTGCAAATATAATAGA+TGG - chr7.4:63979490-63979509 None:intergenic 15.0%
!! AAATATTTAATGAACCTAAA+AGG - chr7.4:63979682-63979701 None:intergenic 15.0%
!! AAATTGCAAATATAATAGAT+GGG - chr7.4:63979489-63979508 None:intergenic 15.0%
!! AACATAAATCATAAATCAAA+AGG + chr7.4:63982034-63982053 MS.gene87159:intron 15.0%
!! ACATAAATCATAAATCAAAA+GGG + chr7.4:63982035-63982054 MS.gene87159:intron 15.0%
!! ATATAATTGTTATATCTACA+GGG + chr7.4:63981320-63981339 MS.gene87159:intron 15.0%
!! GTCAAAATAAATTGTTAATA+AGG - chr7.4:63978151-63978170 None:intergenic 15.0%
!! TACATAAACAAAAAAAACTT+CGG - chr7.4:63979874-63979893 None:intergenic 15.0%
!! TATATAATTGTTATATCTAC+AGG + chr7.4:63981319-63981338 MS.gene87159:intron 15.0%
!! TTGAGTTATTTATAAACTTA+TGG + chr7.4:63980861-63980880 MS.gene87159:intron 15.0%
!! TTTATTGAATGTTACATTAA+CGG + chr7.4:63979146-63979165 MS.gene87159:intron 15.0%
!!! ATGTTTTTATAAAACAAGAT+TGG + chr7.4:63978337-63978356 MS.gene87159:intron 15.0%
!!! TACTTTTACTATTAGAATAA+GGG - chr7.4:63978303-63978322 None:intergenic 15.0%
!!! TTTTCTTATTAAGATTAAAG+GGG - chr7.4:63977731-63977750 None:intergenic 15.0%
!! AAAACAATAGAGAAACAAAA+AGG + chr7.4:63978873-63978892 MS.gene87159:intron 20.0%
!! AACAGTCTTAATTATATGAA+AGG - chr7.4:63981257-63981276 None:intergenic 20.0%
!! ATTAAGAAGAGAAAAAGATA+AGG - chr7.4:63978848-63978867 None:intergenic 20.0%
!! ATTAATTGGTAAGATTAAAC+AGG - chr7.4:63981907-63981926 None:intergenic 20.0%
!! ATTCAAACCTATAAATAGAA+AGG + chr7.4:63980326-63980345 MS.gene87159:intron 20.0%
!! GCATAAATATTTAGCAATTA+TGG + chr7.4:63981872-63981891 MS.gene87159:intron 20.0%
!! TATGATTTAAGCATTCAATT+AGG + chr7.4:63978090-63978109 MS.gene87159:intron 20.0%
!! TTATAACTTCATTTCATCTT+TGG - chr7.4:63977115-63977134 None:intergenic 20.0%
!! TTCATACTAAGTTCAAAAAT+TGG - chr7.4:63979460-63979479 None:intergenic 20.0%
!! TTTCTTAAGATTATCATCAA+AGG - chr7.4:63977033-63977052 None:intergenic 20.0%
!!! AAAGAAAGTGTTTAAAAACA+CGG - chr7.4:63980536-63980555 None:intergenic 20.0%
!!! AATAAGTTGAAAATAGCTTA+TGG + chr7.4:63977158-63977177 MS.gene87159:intron 20.0%
!!! AGTTTAATGTTTTGATTTAG+AGG + chr7.4:63980913-63980932 MS.gene87159:intron 20.0%
!!! AGTTTTGGTTAAATTATTAC+AGG + chr7.4:63982140-63982159 MS.gene87159:intron 20.0%
!!! ATTTTGAATCTAGCTTTTTT+TGG + chr7.4:63979416-63979435 MS.gene87159:intron 20.0%
!!! ATTTTTGAACTTAGTATGAA+TGG + chr7.4:63979460-63979479 MS.gene87159:intron 20.0%
!!! ATTTTTTAAAGTTGTTGAGA+TGG + chr7.4:63978189-63978208 MS.gene87159:intron 20.0%
!!! CGTGTTTTATTTTCTTTTAT+TGG + chr7.4:63979897-63979916 MS.gene87159:intron 20.0%
!!! GAGCTAATTTTAAAATCATA+GGG - chr7.4:63978254-63978273 None:intergenic 20.0%
!!! GTACTTTTACTATTAGAATA+AGG - chr7.4:63978304-63978323 None:intergenic 20.0%
!!! GTTTTTTCAAGAGTTATTTA+TGG - chr7.4:63981576-63981595 None:intergenic 20.0%
!!! TAATTTCTTGTTATAGTTCT+TGG + chr7.4:63978512-63978531 MS.gene87159:intron 20.0%
!!! TCAACTTTTTTCTGTTATAT+TGG - chr7.4:63978720-63978739 None:intergenic 20.0%
!!! TGAGCTAATTTTAAAATCAT+AGG - chr7.4:63978255-63978274 None:intergenic 20.0%
!!! TTATTCTTTTTCCTTAACTT+GGG - chr7.4:63976999-63977018 None:intergenic 20.0%
!!! TTGTTTTTTTTGAATGAAGT+TGG + chr7.4:63976927-63976946 MS.gene87159:intron 20.0%
!!! TTTATAAACTTATGGATTGA+TGG + chr7.4:63980869-63980888 MS.gene87159:intron 20.0%
!!! TTTATTCTTTTTCCTTAACT+TGG - chr7.4:63977000-63977019 None:intergenic 20.0%
!!! TTTTGAATCTAGCTTTTTTT+GGG + chr7.4:63979417-63979436 MS.gene87159:intron 20.0%
!!! TTTTTTAAAGTTGTTGAGAT+GGG + chr7.4:63978190-63978209 MS.gene87159:intron 20.0%
! AAATGTTGTAAGACAATACA+AGG - chr7.4:63979071-63979090 None:intergenic 25.0%
! AAGATAGTTGTAAGACTATT+TGG - chr7.4:63977214-63977233 None:intergenic 25.0%
! AAGATTAAAGGGGTAAAATT+TGG - chr7.4:63977721-63977740 None:intergenic 25.0%
! AAGGAACTCAAATAAATTAC+AGG - chr7.4:63979705-63979724 None:intergenic 25.0%
! AAGTCATAGATAGATACTTA+TGG - chr7.4:63976877-63976896 None:intergenic 25.0%
! ACAGGTCTGTTAATAAATTA+TGG + chr7.4:63981930-63981949 MS.gene87159:intron 25.0%
! ACTTAACAATTCTTTCAGAA+AGG - chr7.4:63979724-63979743 None:intergenic 25.0%
! AGAAGAGGATAACAAAATAA+GGG - chr7.4:63979537-63979556 None:intergenic 25.0%
! AGGAATTAATGTTCAACTTA+TGG + chr7.4:63979222-63979241 MS.gene87159:CDS 25.0%
! AGTCTTACAACTATCTTATA+AGG + chr7.4:63977217-63977236 MS.gene87159:intron 25.0%
! ATAGCTTATGGATATTTCAT+AGG + chr7.4:63977170-63977189 MS.gene87159:intron 25.0%
! ATTGAGTATTTACTAACTCT+TGG - chr7.4:63979301-63979320 None:intergenic 25.0%
! ATTTAATGAACCTAAAAGGA+TGG - chr7.4:63979678-63979697 None:intergenic 25.0%
! CATATAACAAGTGTTATGAT+AGG + chr7.4:63980267-63980286 MS.gene87159:intron 25.0%
! CATGATTCAAATAACATTGA+GGG + chr7.4:63979025-63979044 MS.gene87159:intron 25.0%
! CTATAAATAGAAAGGATCTA+GGG + chr7.4:63980334-63980353 MS.gene87159:intron 25.0%
! GTCTTACAACTATCTTATAA+GGG + chr7.4:63977218-63977237 MS.gene87159:intron 25.0%
! GTTATAGTTCTTGGATATTA+GGG + chr7.4:63978521-63978540 MS.gene87159:intron 25.0%
! TAATTTATTAACAGACCTGT+CGG - chr7.4:63981930-63981949 None:intergenic 25.0%
! TATAAATAGAAAGGATCTAG+GGG + chr7.4:63980335-63980354 MS.gene87159:intron 25.0%
! TATATATAACCAACAAGTAG+TGG - chr7.4:63981284-63981303 None:intergenic 25.0%
! TGACAATTACCAAACAAATA+GGG - chr7.4:63977605-63977624 None:intergenic 25.0%
! TGACTAGGAAATATTTGTTT+GGG + chr7.4:63977295-63977314 MS.gene87159:intron 25.0%
! TGTTATAGTTCTTGGATATT+AGG + chr7.4:63978520-63978539 MS.gene87159:intron 25.0%
! TTGAACATTAATTCCTACTT+GGG - chr7.4:63979218-63979237 None:intergenic 25.0%
! TTGACTAGGAAATATTTGTT+TGG + chr7.4:63977294-63977313 MS.gene87159:intron 25.0%
! TTGAGTATTTACTAACTCTT+GGG - chr7.4:63979300-63979319 None:intergenic 25.0%
! TTGTAAAGTCATCTAGTTAA+AGG + chr7.4:63981958-63981977 MS.gene87159:intron 25.0%
! TTGTAATTTATCTGCATTCA+GGG + chr7.4:63977531-63977550 MS.gene87159:intron 25.0%
! TTGTATTGTCTTACAACATT+TGG + chr7.4:63979070-63979089 MS.gene87159:intron 25.0%
! TTTGTAATTTATCTGCATTC+AGG + chr7.4:63977530-63977549 MS.gene87159:intron 25.0%
!! AATATAAGAGACCTATTTTG+AGG + chr7.4:63981678-63981697 MS.gene87159:intron 25.0%
!! ACAAGCAATTTTTCTTTAGT+TGG - chr7.4:63979938-63979957 None:intergenic 25.0%
!! ATAATAAGACTTGTTTGAGT+AGG - chr7.4:63980011-63980030 None:intergenic 25.0%
!! ATTTTTAATCATGTAAGCCA+GGG + chr7.4:63978984-63979003 MS.gene87159:intron 25.0%
!! CAAGCAATTTTTCTTTAGTT+GGG - chr7.4:63979937-63979956 None:intergenic 25.0%
!! TAATAAGACTTGTTTGAGTA+GGG - chr7.4:63980010-63980029 None:intergenic 25.0%
!! TTTCTGAAAGAATTGTTAAG+TGG + chr7.4:63979723-63979742 MS.gene87159:intron 25.0%
!!! ATATCAGTGTTCTGAAAAAA+TGG - chr7.4:63978791-63978810 None:intergenic 25.0%
!!! ATGGTATTTTTATGAACCTT+TGG + chr7.4:63980233-63980252 MS.gene87159:intron 25.0%
!!! CTATTTCTACCAACAAAATA+GGG - chr7.4:63978555-63978574 None:intergenic 25.0%
!!! GCTACAAGCTTTTTTTTTTA+TGG + chr7.4:63977135-63977154 MS.gene87159:intron 25.0%
!!! TAAGTTATTTTTACACGACA+CGG - chr7.4:63980840-63980859 None:intergenic 25.0%
!!! TATTCTTTTTCCTTAACTTG+GGG - chr7.4:63976998-63977017 None:intergenic 25.0%
!!! TATTTTTAATCATGTAAGCC+AGG + chr7.4:63978983-63979002 MS.gene87159:intron 25.0%
!!! TCAAACAAGTCTTATTATTG+CGG + chr7.4:63980013-63980032 MS.gene87159:intron 25.0%
!!! TTATCTACAGAAAAGTACTT+AGG - chr7.4:63977912-63977931 None:intergenic 25.0%
AAAATAATTGCCACAAAGCA+AGG + chr7.4:63981736-63981755 MS.gene87159:intron 30.0%
AACATCTTTCACCTCAAAAT+AGG - chr7.4:63981692-63981711 None:intergenic 30.0%
AACTCTTGAAAAAACATGTC+TGG + chr7.4:63981581-63981600 MS.gene87159:intron 30.0%
AATAGCATATGAGCTTATAG+AGG - chr7.4:63977848-63977867 None:intergenic 30.0%
AATGATGAAGAAGATGACTT+GGG - chr7.4:63976713-63976732 None:intergenic 30.0%
ACAATCTTTCTTCTGACTAA+TGG + chr7.4:63981808-63981827 MS.gene87159:intron 30.0%
ACATGAAAAAAAAAAAGGGC+AGG - chr7.4:63980744-63980763 None:intergenic 30.0%
ACTATGCTAGGTATTATTGA+TGG - chr7.4:63979103-63979122 None:intergenic 30.0%
ACTCTTGAAAAAACATGTCT+GGG + chr7.4:63981582-63981601 MS.gene87159:intron 30.0%
ACTTCATTTCATCTTTGGAT+TGG - chr7.4:63977110-63977129 None:intergenic 30.0%
AGATAGCAAACAGAACAAAA+TGG - chr7.4:63979848-63979867 None:intergenic 30.0%
AGGAAAAAGAATAAACGCAT+TGG + chr7.4:63977005-63977024 MS.gene87159:CDS 30.0%
ATATTTGTTTCCTTGCTTTG+TGG - chr7.4:63981749-63981768 None:intergenic 30.0%
ATGATGTATTTCTCATGTCA+AGG - chr7.4:63981438-63981457 None:intergenic 30.0%
ATTGAATGTTACATTAACGG+TGG + chr7.4:63979149-63979168 MS.gene87159:intron 30.0%
CAAGAATGAAACCAGAAAAA+TGG + chr7.4:63979615-63979634 MS.gene87159:intron 30.0%
CAGAAGAGGATAACAAAATA+AGG - chr7.4:63979538-63979557 None:intergenic 30.0%
CATAAGCTATAAGCTCAAAA+AGG - chr7.4:63977260-63977279 None:intergenic 30.0%
CCTAGATCCTTTCTATTTAT+AGG - chr7.4:63980336-63980355 None:intergenic 30.0%
CCTATAAATAGAAAGGATCT+AGG + chr7.4:63980333-63980352 MS.gene87159:intron 30.0%
CTGATCGAATTTGTAATGTT+TGG - chr7.4:63977809-63977828 None:intergenic 30.0%
GACTAGGAAATATTTGTTTG+GGG + chr7.4:63977296-63977315 MS.gene87159:intron 30.0%
GCATGATTCAAATAACATTG+AGG + chr7.4:63979024-63979043 MS.gene87159:intron 30.0%
GCTAGTGAATAGTATTAACA+GGG + chr7.4:63981160-63981179 MS.gene87159:intron 30.0%
GGATGGTTATGCTATATATT+TGG - chr7.4:63979661-63979680 None:intergenic 30.0%
GGCCACATGAAAAAAAAAAA+GGG - chr7.4:63980748-63980767 None:intergenic 30.0%
GTAACATTCAATAAATCGCA+AGG - chr7.4:63979141-63979160 None:intergenic 30.0%
GTGACAATTACCAAACAAAT+AGG - chr7.4:63977606-63977625 None:intergenic 30.0%
GTTCAAAAGTTGTCACAAAA+TGG + chr7.4:63978940-63978959 MS.gene87159:intron 30.0%
GTTGAACATTAATTCCTACT+TGG - chr7.4:63979219-63979238 None:intergenic 30.0%
TAATGATGAAGAAGATGACT+TGG - chr7.4:63976714-63976733 None:intergenic 30.0%
TCAAAAAACTTACCTGTAGA+TGG - chr7.4:63980145-63980164 None:intergenic 30.0%
TCAATCGTCAACAATCATAT+TGG - chr7.4:63981789-63981808 None:intergenic 30.0%
TCTAATAAGCTCATTTGACT+AGG + chr7.4:63977280-63977299 MS.gene87159:intron 30.0%
TGAACATTAATTCCTACTTG+GGG - chr7.4:63979217-63979236 None:intergenic 30.0%
TGATGTATTTCTCATGTCAA+GGG - chr7.4:63981437-63981456 None:intergenic 30.0%
TTCCTCATACTTCATTTCAA+GGG - chr7.4:63982166-63982185 None:intergenic 30.0%
TTCTATAAAACCAGAAACTG+AGG - chr7.4:63980778-63980797 None:intergenic 30.0%
TTTCCTCATACTTCATTTCA+AGG - chr7.4:63982167-63982186 None:intergenic 30.0%
! AACCATTTTGTGACAACTTT+TGG + chr7.4:63978817-63978836 MS.gene87159:intron 30.0%
! ACCATTTTGTGACAACTTTT+GGG + chr7.4:63978818-63978837 MS.gene87159:intron 30.0%
! ATGGTGTCAAGTTATTGATT+TGG + chr7.4:63981651-63981670 MS.gene87159:intron 30.0%
! CGTTTGAAGTTTGAAAATCT+TGG + chr7.4:63979510-63979529 MS.gene87159:intron 30.0%
! GGATATTTCACTATTTTCAG+CGG - chr7.4:63976972-63976991 None:intergenic 30.0%
! TACAATGAATCTAAGGTACT+TGG - chr7.4:63981523-63981542 None:intergenic 30.0%
! TATAGCATAACCATCCTTTT+AGG + chr7.4:63979665-63979684 MS.gene87159:intron 30.0%
! TATTAGAATAAGGGTGTACT+CGG - chr7.4:63978294-63978313 None:intergenic 30.0%
! TCAACTTATGGTTTTCAATC+CGG + chr7.4:63979234-63979253 MS.gene87159:CDS 30.0%
! TTTATGATAGTGAAAGACAG+AGG - chr7.4:63978059-63978078 None:intergenic 30.0%
! TTTGTTGGTAGAAATAGCTA+GGG + chr7.4:63978558-63978577 MS.gene87159:intron 30.0%
!! AGAAGTACAATTTTTCCCTT+TGG + chr7.4:63980970-63980989 MS.gene87159:intron 30.0%
!! GCTATTTCTACCAACAAAAT+AGG - chr7.4:63978556-63978575 None:intergenic 30.0%
!! TTTCTATCTTTTCAGGACTT+GGG - chr7.4:63982200-63982219 None:intergenic 30.0%
!! TTTTGTTGGTAGAAATAGCT+AGG + chr7.4:63978557-63978576 MS.gene87159:intron 30.0%
!!! CATTTTTCTGGTTTCATTCT+TGG - chr7.4:63979617-63979636 None:intergenic 30.0%
!!! GCTTTTTTTGGGCTAATTTA+TGG + chr7.4:63979428-63979447 MS.gene87159:intron 30.0%
!!! TGCCCTTTTTTTTTTTCATG+TGG + chr7.4:63980743-63980762 MS.gene87159:intron 30.0%
AAAAAAAAAAAGGGCAGGCA+GGG - chr7.4:63980739-63980758 None:intergenic 35.0%
AAACAAACAAAGGCAGACTA+AGG - chr7.4:63977961-63977980 None:intergenic 35.0%
AACAAACAAAGGCAGACTAA+GGG - chr7.4:63977960-63977979 None:intergenic 35.0%
ACATGAATTTGACCATCTAC+AGG + chr7.4:63980130-63980149 MS.gene87159:CDS 35.0%
ACCATCAGTTCTGTAGAAAA+AGG - chr7.4:63979179-63979198 None:intergenic 35.0%
ACTAACGGAGTATGCATTTA+GGG + chr7.4:63977470-63977489 MS.gene87159:intron 35.0%
AGAGAATAAGAACACAACGT+GGG + chr7.4:63978901-63978920 MS.gene87159:intron 35.0%
AGTTCTTGGATATTAGGGAA+TGG + chr7.4:63978526-63978545 MS.gene87159:intron 35.0%
ATAGATACTTATGGTGAGAG+TGG - chr7.4:63976868-63976887 None:intergenic 35.0%
ATCTTACCAATTAATCCGAC+AGG + chr7.4:63981912-63981931 MS.gene87159:intron 35.0%
ATGAAGTATGAGGAAATGAC+TGG + chr7.4:63982171-63982190 MS.gene87159:CDS 35.0%
ATGATTTCCCAAAACCAGAA+GGG - chr7.4:63982242-63982261 None:intergenic 35.0%
ATGCGTATTAAAAGCTTAGC+TGG + chr7.4:63981469-63981488 MS.gene87159:intron 35.0%
ATTAATTCCCCTTTCACCAT+TGG - chr7.4:63980296-63980315 None:intergenic 35.0%
CAAGAGTTATTTATGGATGC+AGG - chr7.4:63981569-63981588 None:intergenic 35.0%
CAGTCATTCTCTCAAAGAAA+AGG - chr7.4:63981349-63981368 None:intergenic 35.0%
CTATCTTATAAGGGTCTGTT+TGG + chr7.4:63977227-63977246 MS.gene87159:intron 35.0%
CTCGTGATACAATGAATCTA+AGG - chr7.4:63981530-63981549 None:intergenic 35.0%
CTGCACGATAAGAAATTTGA+AGG + chr7.4:63978018-63978037 MS.gene87159:intron 35.0%
GAAACCAGAAAAATGGAACT+TGG + chr7.4:63979622-63979641 MS.gene87159:intron 35.0%
GACTAATCTCCCTATTTGTT+TGG + chr7.4:63977593-63977612 MS.gene87159:intron 35.0%
GGCTAGTGAATAGTATTAAC+AGG + chr7.4:63981159-63981178 MS.gene87159:intron 35.0%
GGGCCACATGAAAAAAAAAA+AGG - chr7.4:63980749-63980768 None:intergenic 35.0%
TACTCCGTTGAAACAAACAA+AGG - chr7.4:63977971-63977990 None:intergenic 35.0%
TATTGATATTTCCATCACCC+TGG - chr7.4:63979004-63979023 None:intergenic 35.0%
TCAAACTCGAGATTCTACTA+TGG - chr7.4:63981055-63981074 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + chr7.4:63977455-63977474 MS.gene87159:intron 35.0%
TCCCAAAAGTTGTCACAAAA+TGG - chr7.4:63978822-63978841 None:intergenic 35.0%
TCGTCAACAATCATATTGGT+CGG - chr7.4:63981785-63981804 None:intergenic 35.0%
TGATACTCAGTAAACTTGTC+AGG + chr7.4:63980372-63980391 MS.gene87159:intron 35.0%
TGTAAGAGCAGTAAATCACA+AGG - chr7.4:63978670-63978689 None:intergenic 35.0%
TTAATTCCCCTTTCACCATT+GGG - chr7.4:63980295-63980314 None:intergenic 35.0%
TTCTACAGAACTGATGGTAT+TGG + chr7.4:63979181-63979200 MS.gene87159:intron 35.0%
TTGCAATTTCTCTGCATTCA+GGG - chr7.4:63977369-63977388 None:intergenic 35.0%
TTGCTAGAAAGAAAAAACCG+TGG - chr7.4:63979584-63979603 None:intergenic 35.0%
TTTGCAATTTCTCTGCATTC+AGG - chr7.4:63977370-63977389 None:intergenic 35.0%
! AAAGGCTAGTTATGCCTTAT+AGG + chr7.4:63981976-63981995 MS.gene87159:intron 35.0%
! AAGGCTAGTTATGCCTTATA+GGG + chr7.4:63981977-63981996 MS.gene87159:intron 35.0%
! AATCTAAGGTACTTGGAAAG+TGG - chr7.4:63981516-63981535 None:intergenic 35.0%
! ACGCATGGATAGATAAGTTT+TGG + chr7.4:63982125-63982144 MS.gene87159:intron 35.0%
! ATGAAAGGTGTAGATGTTTG+TGG - chr7.4:63981242-63981261 None:intergenic 35.0%
! GAAGTTCTTGATAGTATTCG+TGG + chr7.4:63981371-63981390 MS.gene87159:CDS 35.0%
! GTTTTGTGAAGCTGAAAAAG+CGG - chr7.4:63976823-63976842 None:intergenic 35.0%
! TAATACTATTCACTAGCCTC+TGG - chr7.4:63981157-63981176 None:intergenic 35.0%
! TCCTTTTTCTACAGAACTGA+TGG + chr7.4:63979175-63979194 MS.gene87159:intron 35.0%
! TCTAAAGTTCATGACTATGC+TGG + chr7.4:63979958-63979977 MS.gene87159:intron 35.0%
! TCTGCCTTTGTTTGTTTCAA+CGG + chr7.4:63977964-63977983 MS.gene87159:intron 35.0%
! TCTTTGTTTGCATCCCTATA+AGG - chr7.4:63981993-63982012 None:intergenic 35.0%
! TGAAAGGTGTAGATGTTTGT+GGG - chr7.4:63981241-63981260 None:intergenic 35.0%
! TGAAGTGGGTCATATTTTGT+GGG + chr7.4:63980502-63980521 MS.gene87159:intron 35.0%
! TTGTTGGTAGAAATAGCTAG+GGG + chr7.4:63978559-63978578 MS.gene87159:intron 35.0%
!! CTTTCTATCTTTTCAGGACT+TGG - chr7.4:63982201-63982220 None:intergenic 35.0%
!! GCTATATATTTGGTTCTTGC+TGG - chr7.4:63979651-63979670 None:intergenic 35.0%
AAATATGACCCACTTCAGCA+AGG - chr7.4:63980499-63980518 None:intergenic 40.0%
AACAGACCTGTCGGATTAAT+TGG - chr7.4:63981921-63981940 None:intergenic 40.0%
AACCAGAAACTGAGGAAGTA+AGG - chr7.4:63980770-63980789 None:intergenic 40.0%
AACCGAACACTCTTCAATGA+GGG + chr7.4:63979322-63979341 MS.gene87159:CDS 40.0%
AAGGTGAACCGACAAACTTT+GGG - chr7.4:63978651-63978670 None:intergenic 40.0%
AATAGAAAGGATCTAGGGGT+CGG + chr7.4:63980339-63980358 MS.gene87159:intron 40.0%
AATATCCAGACCCCAAGTTA+AGG + chr7.4:63976985-63977004 MS.gene87159:CDS 40.0%
AATCAACAAACCAATCCCAG+AGG + chr7.4:63978400-63978419 MS.gene87159:intron 40.0%
AATCTTGATTGAGCACTCGA+TGG + chr7.4:63981632-63981651 MS.gene87159:intron 40.0%
ACCAACAGAGTCTACAATCA+GGG - chr7.4:63977398-63977417 None:intergenic 40.0%
ACCAGAAACTGAGGAAGTAA+GGG - chr7.4:63980769-63980788 None:intergenic 40.0%
ACTAACGGAGTCTACATTCA+GGG + chr7.4:63977438-63977457 MS.gene87159:intron 40.0%
AGAAAGCTAAGCATCTGCAA+TGG - chr7.4:63981123-63981142 None:intergenic 40.0%
AGAAAGTCGCAGAACAAGAA+AGG + chr7.4:63982215-63982234 MS.gene87159:CDS 40.0%
AGACTCTGTTGGTCAATTTC+AGG + chr7.4:63977405-63977424 MS.gene87159:intron 40.0%
AGATTCTACTATGGATCTGG+AGG - chr7.4:63981046-63981065 None:intergenic 40.0%
ATACACACTCATTCTGCGTT+TGG + chr7.4:63978121-63978140 MS.gene87159:intron 40.0%
ATATGCAGACGACATACCAA+AGG - chr7.4:63980252-63980271 None:intergenic 40.0%
ATGAGCCATGTTACAATCCT+CGG + chr7.4:63981002-63981021 MS.gene87159:intron 40.0%
ATTGATGCACGTGATGTCAA+GGG + chr7.4:63980059-63980078 MS.gene87159:CDS 40.0%
CACTTTCTTTGATGAGACAC+AGG + chr7.4:63980546-63980565 MS.gene87159:intron 40.0%
CATGATTTCCCAAAACCAGA+AGG - chr7.4:63982243-63982262 None:intergenic 40.0%
CGTTAGAAAGCAACTATGCT+AGG - chr7.4:63979115-63979134 None:intergenic 40.0%
CTTTACGTCAGCATTAATGC+CGG - chr7.4:63979362-63979381 None:intergenic 40.0%
CTTTAGTCCCTGAATAGGAA+AGG - chr7.4:63977572-63977591 None:intergenic 40.0%
GAAAAAAAAAAAGGGCAGGC+AGG - chr7.4:63980740-63980759 None:intergenic 40.0%
GACTAACGGAGTATGCATTT+AGG + chr7.4:63977469-63977488 MS.gene87159:intron 40.0%
GACTACTCATTTCCCATTCA+GGG - chr7.4:63977338-63977357 None:intergenic 40.0%
GACTCTGTTGGTCAATTTCA+GGG + chr7.4:63977406-63977425 MS.gene87159:intron 40.0%
GAGAGAATAAGAACACAACG+TGG + chr7.4:63978900-63978919 MS.gene87159:intron 40.0%
GAGAGAGTGAGAGAAAACTT+AGG - chr7.4:63980600-63980619 None:intergenic 40.0%
GAGTGCTCAATCAAGATTTG+AGG - chr7.4:63981630-63981649 None:intergenic 40.0%
GCATCAATCTTCACAGATTC+TGG - chr7.4:63980047-63980066 None:intergenic 40.0%
GCATTTCTGCTTGTAGAAGA+TGG + chr7.4:63980214-63980233 MS.gene87159:intron 40.0%
GGGGATAGAAATCATAGTCT+GGG + chr7.4:63978579-63978598 MS.gene87159:intron 40.0%
GTCTTACACCCAAAGTTTGT+CGG + chr7.4:63978640-63978659 MS.gene87159:intron 40.0%
GTTATCATGACGAGCTTCAA+TGG + chr7.4:63979745-63979764 MS.gene87159:intron 40.0%
GTTCATGACTATGCTGGATA+TGG + chr7.4:63979964-63979983 MS.gene87159:intron 40.0%
TAGTATTCGTGGACAGTTAC+AGG + chr7.4:63981382-63981401 MS.gene87159:CDS 40.0%
TCAGGGACTAAAGTGACTAA+CGG + chr7.4:63977423-63977442 MS.gene87159:intron 40.0%
TCATGTTGAAATATCCGTGC+TGG - chr7.4:63980116-63980135 None:intergenic 40.0%
TCGAGATTCTACTATGGATC+TGG - chr7.4:63981049-63981068 None:intergenic 40.0%
TCTCATGTCAAGGGAAAGAA+TGG - chr7.4:63981428-63981447 None:intergenic 40.0%
TGACTACTCATTTCCCATTC+AGG - chr7.4:63977339-63977358 None:intergenic 40.0%
TGGTGAAAGGGGAATTAATG+AGG + chr7.4:63980297-63980316 MS.gene87159:intron 40.0%
TGTAAGAACATCCCCAATGA+GGG + chr7.4:63980427-63980446 MS.gene87159:intron 40.0%
TGTCTAAGTCTATGATGCGA+AGG + chr7.4:63981711-63981730 MS.gene87159:intron 40.0%
TTCTGCAATTGAGTGAGTGT+AGG - chr7.4:63978618-63978637 None:intergenic 40.0%
TTGTAAGAACATCCCCAATG+AGG + chr7.4:63980426-63980445 MS.gene87159:intron 40.0%
TTTACGTCAGCATTAATGCC+GGG - chr7.4:63979361-63979380 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG - chr7.4:63977373-63977354 None:intergenic 40.0%
! ATTGCAGATGCTTAGCTTTC+TGG + chr7.4:63981122-63981141 MS.gene87159:intron 40.0%
! CTGAAGTGGGTCATATTTTG+TGG + chr7.4:63980501-63980520 MS.gene87159:intron 40.0%
! CTGCGACTTTCTATCTTTTC+AGG - chr7.4:63982207-63982226 None:intergenic 40.0%
! CTTATGGTTTTCAATCCGGT+AGG + chr7.4:63979238-63979257 MS.gene87159:CDS 40.0%
! GAATGGCTACCCTATTTTGT+TGG + chr7.4:63978543-63978562 MS.gene87159:intron 40.0%
! TGTTGGTAGAAATAGCTAGG+GGG + chr7.4:63978560-63978579 MS.gene87159:intron 40.0%
! TTGGCTCAACTGTTTTGCAA+CGG + chr7.4:63980472-63980491 MS.gene87159:intron 40.0%
!! AACCCTCATTGAAGAGTGTT+CGG - chr7.4:63979327-63979346 None:intergenic 40.0%
!! GATGCCAAGTTCCATTTTTC+TGG - chr7.4:63979629-63979648 None:intergenic 40.0%
!! TTTCTGGTTACATTGACCAG+AGG + chr7.4:63981138-63981157 MS.gene87159:intron 40.0%
!! TTTTTCCTTAACTTGGGGTC+TGG - chr7.4:63976993-63977012 None:intergenic 40.0%
!!! CAGCTCATGCTATTTTGTCA+GGG - chr7.4:63978476-63978495 None:intergenic 40.0%
!!! TCAGCTCATGCTATTTTGTC+AGG - chr7.4:63978477-63978496 None:intergenic 40.0%
AATCATGTAAGCCAGGGTGA+TGG + chr7.4:63978990-63979009 MS.gene87159:intron 45.0%
AGAACAAGAAAGGTCCCTTC+TGG + chr7.4:63982225-63982244 MS.gene87159:CDS 45.0%
AGAGAATGCACAGACGAGAA+CGG - chr7.4:63980679-63980698 None:intergenic 45.0%
AGAGGACACGGTTATAAAGC+AGG - chr7.4:63978430-63978449 None:intergenic 45.0%
AGATAGTCAGGTGGAAGAAG+CGG - chr7.4:63976779-63976798 None:intergenic 45.0%
AGTCACGTTAGTCCCTGAAT+GGG + chr7.4:63977323-63977342 MS.gene87159:intron 45.0%
ATAACCGTGTCCTCTGTTCT+GGG + chr7.4:63978435-63978454 MS.gene87159:intron 45.0%
ATAGAAAGGATCTAGGGGTC+GGG + chr7.4:63980340-63980359 MS.gene87159:intron 45.0%
ATAGGCACCCAATGGTGAAA+GGG + chr7.4:63980285-63980304 MS.gene87159:intron 45.0%
CAAGGTGAACCGACAAACTT+TGG - chr7.4:63978652-63978671 None:intergenic 45.0%
CGGCATTAATGCTGACGTAA+AGG + chr7.4:63979360-63979379 MS.gene87159:CDS 45.0%
CTAGTCTACGATCCCTCATT+GGG - chr7.4:63980442-63980461 None:intergenic 45.0%
CTGTTCATGCCACTACTTGT+TGG + chr7.4:63981272-63981291 MS.gene87159:intron 45.0%
GAACCGAACACTCTTCAATG+AGG + chr7.4:63979321-63979340 MS.gene87159:CDS 45.0%
GACCAACAGAGTCTACAATC+AGG - chr7.4:63977399-63977418 None:intergenic 45.0%
GACGACTCCTTTCCTATTCA+GGG + chr7.4:63977562-63977581 MS.gene87159:intron 45.0%
GACTAACGGAGTCTACATTC+AGG + chr7.4:63977437-63977456 MS.gene87159:intron 45.0%
GAGGACACGGTTATAAAGCA+GGG - chr7.4:63978429-63978448 None:intergenic 45.0%
GATTGATGCACGTGATGTCA+AGG + chr7.4:63980058-63980077 MS.gene87159:CDS 45.0%
GGATAAAAGATCGTAACCCG+AGG - chr7.4:63981022-63981041 None:intergenic 45.0%
GGCCCTTGAAATGAAGTATG+AGG + chr7.4:63982161-63982180 MS.gene87159:intron 45.0%
GGGGATGTTCTTACAATGCA+AGG - chr7.4:63980422-63980441 None:intergenic 45.0%
GGGGGATAGAAATCATAGTC+TGG + chr7.4:63978578-63978597 MS.gene87159:intron 45.0%
GTAACCCGAGGATTGTAACA+TGG - chr7.4:63981010-63981029 None:intergenic 45.0%
GTATCACGAGCTCCTATCTA+GGG + chr7.4:63981540-63981559 MS.gene87159:intron 45.0%
GTGTTATGATAGGCACCCAA+TGG + chr7.4:63980277-63980296 MS.gene87159:intron 45.0%
GTTGAAATATCCGTGCTGGA+AGG - chr7.4:63980112-63980131 None:intergenic 45.0%
TACACGACACGGTTCAAACA+GGG - chr7.4:63980829-63980848 None:intergenic 45.0%
TAGTCACGTTAGTCCCTGAA+TGG + chr7.4:63977322-63977341 MS.gene87159:intron 45.0%
TAGTCTACGATCCCTCATTG+GGG - chr7.4:63980441-63980460 None:intergenic 45.0%
TATAAAGCAGGGACACCTCT+GGG - chr7.4:63978418-63978437 None:intergenic 45.0%
TATAACCGTGTCCTCTGTTC+TGG + chr7.4:63978434-63978453 MS.gene87159:intron 45.0%
TCCCTGATTGTAGACTCTGT+TGG + chr7.4:63977394-63977413 MS.gene87159:intron 45.0%
TGACGACTCCTTTCCTATTC+AGG + chr7.4:63977561-63977580 MS.gene87159:intron 45.0%
TGAGCCATGTTACAATCCTC+GGG + chr7.4:63981003-63981022 MS.gene87159:intron 45.0%
TGTATCACGAGCTCCTATCT+AGG + chr7.4:63981539-63981558 MS.gene87159:intron 45.0%
TTACACGACACGGTTCAAAC+AGG - chr7.4:63980830-63980849 None:intergenic 45.0%
TTACGTCAGCATTAATGCCG+GGG - chr7.4:63979360-63979379 None:intergenic 45.0%
TTATAAAGCAGGGACACCTC+TGG - chr7.4:63978419-63978438 None:intergenic 45.0%
TTATCCTCTTCTGACCAACC+TGG + chr7.4:63979545-63979564 MS.gene87159:intron 45.0%
TTCTACTATGGATCTGGAGG+AGG - chr7.4:63981043-63981062 None:intergenic 45.0%
! CGGTTTTCAGTCAGTTTGTC+TGG + chr7.4:63980086-63980105 MS.gene87159:CDS 45.0%
! GATGAAGAAGATGACTTGGG+AGG - chr7.4:63976710-63976729 None:intergenic 45.0%
! TGAAGCTGAAAAAGCGGACT+TGG - chr7.4:63976817-63976836 None:intergenic 45.0%
!!! AGAAAGGTCCCTTCTGGTTT+TGG + chr7.4:63982231-63982250 MS.gene87159:CDS 45.0%
!!! GAAAGGTCCCTTCTGGTTTT+GGG + chr7.4:63982232-63982251 MS.gene87159:CDS 45.0%
AAAAAAGGGCAGGCAGGGAA+AGG - chr7.4:63980734-63980753 None:intergenic 50.0%
AAGTCCCAGAACAGAGGACA+CGG - chr7.4:63978442-63978461 None:intergenic 50.0%
AATGGAGCTCCCCTCATTTG+GGG - chr7.4:63981105-63981124 None:intergenic 50.0%
AGACAGAAGTCCCAGAACAG+AGG - chr7.4:63978448-63978467 None:intergenic 50.0%
CAAGAAGGAGCAACATCGCA+GGG - chr7.4:63980636-63980655 None:intergenic 50.0%
CAATGGAGCTCCCCTCATTT+GGG - chr7.4:63981106-63981125 None:intergenic 50.0%
CACGTGATGTCAAGGGAACA+CGG + chr7.4:63980066-63980085 MS.gene87159:CDS 50.0%
CCAATGAGGGATCGTAGACT+AGG + chr7.4:63980440-63980459 MS.gene87159:intron 50.0%
CCTAGTCTACGATCCCTCAT+TGG - chr7.4:63980443-63980462 None:intergenic 50.0%
GACACGGTTCAAACAGGGTA+GGG - chr7.4:63980824-63980843 None:intergenic 50.0%
GAGGGTTGTCTATCTTTCCC+CGG + chr7.4:63979340-63979359 MS.gene87159:CDS 50.0%
GATAGGCACCCAATGGTGAA+AGG + chr7.4:63980284-63980303 MS.gene87159:intron 50.0%
GCCCTTACTTCCTCAGTTTC+TGG + chr7.4:63980765-63980784 MS.gene87159:intron 50.0%
GGATGCAGGTTTCCCTAGAT+AGG - chr7.4:63981555-63981574 None:intergenic 50.0%
GTAGACTAGGATCGCACGTT+TGG + chr7.4:63980453-63980472 MS.gene87159:intron 50.0%
TAGGCACCCAATGGTGAAAG+GGG + chr7.4:63980286-63980305 MS.gene87159:intron 50.0%
TGAGCGCTTACCCCAAATGA+GGG + chr7.4:63981092-63981111 MS.gene87159:intron 50.0%
TGTGCGAGCGCTTATGTTTG+TGG - chr7.4:63982090-63982109 None:intergenic 50.0%
TTGAGCGCTTACCCCAAATG+AGG + chr7.4:63981091-63981110 MS.gene87159:intron 50.0%
! GTGGAAGAAGCGGTTTGGAA+TGG - chr7.4:63976769-63976788 None:intergenic 50.0%
!! AAAGCCAGGTTGGTCAGAAG+AGG - chr7.4:63979552-63979571 None:intergenic 50.0%
!! CTGAAAAAGCGGACTTGGTG+CGG - chr7.4:63976812-63976831 None:intergenic 50.0%
!! CTTCTGACCAACCTGGCTTT+TGG + chr7.4:63979552-63979571 MS.gene87159:intron 50.0%
CAACATCGCAGGGAGGAGAT+GGG - chr7.4:63980626-63980645 None:intergenic 55.0%
CACACACACACACACACGCA+TGG + chr7.4:63982110-63982129 MS.gene87159:intron 55.0%
CGACACGGTTCAAACAGGGT+AGG - chr7.4:63980825-63980844 None:intergenic 55.0%
GACGAGAACGGAGTTGCAGT+TGG - chr7.4:63980667-63980686 None:intergenic 55.0%
GAGAACGGAGTTGCAGTTGG+TGG - chr7.4:63980664-63980683 None:intergenic 55.0%
GAGCGCTTACCCCAAATGAG+GGG + chr7.4:63981093-63981112 MS.gene87159:intron 55.0%
GCAACGGACCTTGCTGAAGT+GGG + chr7.4:63980488-63980507 MS.gene87159:intron 55.0%
GCAAGAAGGAGCAACATCGC+AGG - chr7.4:63980637-63980656 None:intergenic 55.0%
GCAATGGAGCTCCCCTCATT+TGG - chr7.4:63981107-63981126 None:intergenic 55.0%
GCACTCACCAAAAGCCAGGT+TGG - chr7.4:63979562-63979581 None:intergenic 55.0%
GGTCTTTCAGCACCCCAAGT+AGG + chr7.4:63979202-63979221 MS.gene87159:CDS 55.0%
GGTGGAGAACACGTTGCAGA+CGG - chr7.4:63980713-63980732 None:intergenic 55.0%
GGTTCAAACAGGGTAGGGCA+GGG - chr7.4:63980819-63980838 None:intergenic 55.0%
GTCAGGTGGAAGAAGCGGTT+TGG - chr7.4:63976774-63976793 None:intergenic 55.0%
GTTCAAACAGGGTAGGGCAG+GGG - chr7.4:63980818-63980837 None:intergenic 55.0%
TGCAACGGACCTTGCTGAAG+TGG + chr7.4:63980487-63980506 MS.gene87159:intron 55.0%
TGGAGGAGGAGATAGTCAGG+TGG - chr7.4:63976788-63976807 None:intergenic 55.0%
TGGCAGCAAGTGCAGAACAG+CGG - chr7.4:63976749-63976768 None:intergenic 55.0%
TTCAAACAGGGTAGGGCAGG+GGG - chr7.4:63980817-63980836 None:intergenic 55.0%
TTCAATCCGGTAGGCGAACG+TGG + chr7.4:63979247-63979266 MS.gene87159:CDS 55.0%
! GTTTGTCTGGCCTTCCAGCA+CGG + chr7.4:63980099-63980118 MS.gene87159:CDS 55.0%
!! CAGTTGGTGGCAGTGCAAGA+AGG - chr7.4:63980651-63980670 None:intergenic 55.0%
!! CTGGCTTTTGGTGAGTGCCA+CGG + chr7.4:63979564-63979583 MS.gene87159:intron 55.0%
AAAGGGCAGGCAGGGAAAGG+TGG - chr7.4:63980731-63980750 None:intergenic 60.0%
CAAGTGCAGAACAGCGGTGG+TGG - chr7.4:63976743-63976762 None:intergenic 60.0%
CAGCAAGTGCAGAACAGCGG+TGG - chr7.4:63976746-63976765 None:intergenic 60.0%
CCTTCACCACGTTCGCCTAC+CGG - chr7.4:63979256-63979275 None:intergenic 60.0%
CGGTTCAAACAGGGTAGGGC+AGG - chr7.4:63980820-63980839 None:intergenic 60.0%
CGTGGCACTCACCAAAAGCC+AGG - chr7.4:63979566-63979585 None:intergenic 60.0%
GAAGGAGCAACATCGCAGGG+AGG - chr7.4:63980633-63980652 None:intergenic 60.0%
GCAACATCGCAGGGAGGAGA+TGG - chr7.4:63980627-63980646 None:intergenic 60.0%
GGCTGGAGGAGGAGATAGTC+AGG - chr7.4:63976791-63976810 None:intergenic 60.0%
! CAGAACAGCGGTGGTGGTGT+TGG - chr7.4:63976737-63976756 None:intergenic 60.0%
!! AAAAGCGGACTTGGTGCGGC+TGG - chr7.4:63976808-63976827 None:intergenic 60.0%
!! AGCAGGGACACCTCTGGGAT+TGG - chr7.4:63978413-63978432 None:intergenic 60.0%
CCGGTAGGCGAACGTGGTGA+AGG + chr7.4:63979253-63979272 MS.gene87159:CDS 65.0%
!! AGCGGACTTGGTGCGGCTGG+AGG - chr7.4:63976805-63976824 None:intergenic 70.0%
!! GGACTTGGTGCGGCTGGAGG+AGG - chr7.4:63976802-63976821 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 63976696 63982263 63976696 ID=MS.gene87159
chr7.4 mRNA 63976696 63982263 63976696 ID=MS.gene87159.t1;Parent=MS.gene87159
chr7.4 exon 63976696 63976855 63976696 ID=MS.gene87159.t1.exon1;Parent=MS.gene87159.t1
chr7.4 CDS 63976696 63976855 63976696 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
chr7.4 exon 63976946 63977084 63976946 ID=MS.gene87159.t1.exon2;Parent=MS.gene87159.t1
chr7.4 CDS 63976946 63977084 63976946 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
chr7.4 exon 63979189 63979381 63979189 ID=MS.gene87159.t1.exon3;Parent=MS.gene87159.t1
chr7.4 CDS 63979189 63979381 63979189 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
chr7.4 exon 63980041 63980151 63980041 ID=MS.gene87159.t1.exon4;Parent=MS.gene87159.t1
chr7.4 CDS 63980041 63980151 63980041 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
chr7.4 exon 63981341 63981403 63981341 ID=MS.gene87159.t1.exon5;Parent=MS.gene87159.t1
chr7.4 CDS 63981341 63981403 63981341 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
chr7.4 exon 63982162 63982263 63982162 ID=MS.gene87159.t1.exon6;Parent=MS.gene87159.t1
chr7.4 CDS 63982162 63982263 63982162 ID=cds.MS.gene87159.t1;Parent=MS.gene87159.t1
Gene Sequence

>MS.gene87159

ATGGCTTCACTCCTCCCAAGTCATCTTCTTCATCATTACCAACACCACCACCGCTGTTCTGCACTTGCTGCCATTCCAAACCGCTTCTTCCACCTGACTATCTCCTCCTCCAGCCGCACCAAGTCCGCTTTTTCAGCTTCACAAAACGAACTCGCTTCTCGTATGTTCTCCACTCTCACCATAAGTATCTATCTATGACTTTTTTGCTCAAACGCTTCTCGTAATCTCTGTTTGTTTTTTTTGAATGAAGTTGGTGATTTAGAATTTGAAGCGCCGCTGAAAATAGTGAAATATCCAGACCCCAAGTTAAGGAAAAAGAATAAACGCATTGGAACCTTTGATGATAATCTTAAGAAACTTGTAGATGAAATGTTCGACGTAATGTACAAGTAAGTAACACTTTTTTTATTTCCAATCCAAAGATGAAATGAAGTTATAAGCTACAAGCTTTTTTTTTTATGGAATAAGTTGAAAATAGCTTATGGATATTTCATAGGTTGATTTCATTAGCTCTTCCAAATAGTCTTACAACTATCTTATAAGGGTCTGTTTGGCAAGACTCCTTTTTGAGCTTATAGCTTATGTCTAATAAGCTCATTTGACTAGGAAATATTTGTTTGGGGAATTAGTCACGTTAGTCCCTGAATGGGAAATGAGTAGTCACTTTAGTCCCTGAATGCAGAGAAATTGCAAAACAGTCCCTGATTGTAGACTCTGTTGGTCAATTTCAGGGACTAAAGTGACTAACGGAGTCTACATTCAGGGACTAAATTGACTAACGGAGTATGCATTTAGGGACTAAATTGACTAACAGAGTCTACGTTTAGAGACTATTTTGTAATTTATCTGCATTCAGGGACTAAAGTGACGACTCCTTTCCTATTCAGGGACTAAAGTGACTAATCTCCCTATTTGTTTGGTAATTGTCACTTTCTCATAAGCTTATAGCTTATTTTATTTTACTAGCTTACAACGTTTTTTGATGAGATAATTCAAGTAACTTATAGCTTATGATATATTAACCAAATTTTACCCCTTTAATCTTAATAAGAAAAATCAAATTTGTTTTTGTCATTTTATATTTATAACTTAGTTTAACATCTAATTTTACCAAACATTACAAATTCGATCAGCTAACTCATCATCTATCCTCTATAAGCTCATATGCTATTAGTTAGCTTATCAACTATGCGCTACATTTTACTAAACAGAGCCTAAGTACTTTTCTGTAGATAAGTTCAAATGAGTCAATTCAAACAGACCCTTAGTCTGCCTTTGTTTGTTTCAACGGAGTAGAATATTTTCATTGACTCATTTATGATCTGCACGATAAGAAATTTGAAGGAAATTTTTTGTTTCTCCTCTGTCTTTCACTATCATAAAGATTTTATTTGTATGATTTAAGCATTCAATTAGGTATAGTAAATACACACTCATTCTGCGTTTGGATTGCCTTATTAACAATTTATTTTGACTTATTTGCTTGCATAATCATTTTTTAAAGTTGTTGAGATGGGTTATCGAAATAGCTTATAGCATATTTATGAAGAGTTTTCCCTATGATTTTAAAATTAGCTCATACATGAGCATTGTATCCGAGTACACCCTTATTCTAATAGTAAAAGTACGTATTTTCAGCAAATGTTTTTATAAAACAAGATTGGTCATTATGTATGCAAAATCAACTATATTTGACGTTCGAAGAATCAACAAACCAATCCCAGAGGTGTCCCTGCTTTATAACCGTGTCCTCTGTTCTGGGACTTCTGTCTAATGTCCCTGACAAAATAGCATGAGCTGATAATGATAGTACATTTAATTTCTTGTTATAGTTCTTGGATATTAGGGAATGGCTACCCTATTTTGTTGGTAGAAATAGCTAGGGGGATAGAAATCATAGTCTGGGAGAAGATGTAAAACCTACACTCACTCAATTGCAGAATAGTCTTACACCCAAAGTTTGTCGGTTCACCTTGTGATTTACTGCTCTTACAAAAACAGTAAATCTTTTATCTAGTATGCCAATATAACAGAAAAAAGTTGAATTTGAACAACACTTGAAATATTTTTAAGAGTAATGATATTTGTAGAACCATTTTTTCAGAACACTGATATCTGTACAACCATTTTGTGACAACTTTTGGGACAACCTTATCTTTTTCTCTTCTTAATGATCAAAAACAATAGAGAAACAAAAAGGAAGAGAGAGAATAAGAACACAACGTGGGTATGAGAGAGAAAGTTGTTCAAAAGTTGTCACAAAATGGTTGTGCAAATATCATTTCTCTATTTTTAATCATGTAAGCCAGGGTGATGGAAATATCAATAGCATGATTCAAATAACATTGAGGGATATTTCAGAGAAATCGATACCTTGTATTGTCTTACAACATTTGGAATTAAACCATCAATAATACCTAGCATAGTTGCTTTCTAACGAGTCCTTGCGATTTATTGAATGTTACATTAACGGTGGACTTCCTTTTTCTACAGAACTGATGGTATTGGTCTTTCAGCACCCCAAGTAGGAATTAATGTTCAACTTATGGTTTTCAATCCGGTAGGCGAACGTGGTGAAGGAGAAGAAATTGTTCTTGTAAACCCAAGAGTTAGTAAATACTCAATGAACCGAACACTCTTCAATGAGGGTTGTCTATCTTTCCCCGGCATTAATGCTGACGTAAAGGTATGAAAATGAAACTCTTTTCTTTTACTGTACTATTTTGAATCTAGCTTTTTTTGGGCTAATTTATGGTGATAGCCAATTTTTGAACTTAGTATGAATGGTATCCCATCTATTATATTTGCAATTTTCGTTTGAAGTTTGAAAATCTTGGTCCCTTATTTTGTTATCCTCTTCTGACCAACCTGGCTTTTGGTGAGTGCCACGGTTTTTTCTTTCTAGCAATTAGAAACTACCAAGAATGAAACCAGAAAAATGGAACTTGGCATCCAGCAAGAACCAAATATATAGCATAACCATCCTTTTAGGTTCATTAAATATTTCCTGTAATTTATTTGAGTTCCTTTCTGAAAGAATTGTTAAGTGGTTATCATGACGAGCTTCAATGGCTACATGTCTGTTTTATTTTCCTTTTTGATTTATTTTGTAAATAACAGTTGTGTTGTGTTTGTTCGAATTTGTTATTCCATTTTGTTCTGTTTGCTATCTGTACCGAAGTTTTTTTTGTTTATGTAGTTCGTGTTTTATTTTCTTTTATTGGTATTTAAAACTGTGCCCAACTAAAGAAAAATTGCTTGTTCTAAAGTTCATGACTATGCTGGATATGGTCTTTTAATGTTTATTTCATCCCTACTCAAACAAGTCTTATTATTGCGGTGTAGAGACCAGAATCTGTGAAGATTGATGCACGTGATGTCAAGGGAACACGGTTTTCAGTCAGTTTGTCTGGCCTTCCAGCACGGATATTTCAACATGAATTTGACCATCTACAGGTAAGTTTTTTGACTTGCAAATATAAAGATTTTTTTTTTCTTTTCTTTTTACTGATAATAAAGCATTTCTGCTTGTAGAAGATGGTATTTTTATGAACCTTTGGTATGTCGTCTGCATATAACAAGTGTTATGATAGGCACCCAATGGTGAAAGGGGAATTAATGAGGATATCAATTCAAACCTATAAATAGAAAGGATCTAGGGGTCGGGCAGTTTGTTTGATACTCAGTAAACTTGTCAGGACAGAAAAAGTTCTCTCGAACACACCTTGCATTGTAAGAACATCCCCAATGAGGGATCGTAGACTAGGATCGCACGTTTGGCTCAACTGTTTTGCAACGGACCTTGCTGAAGTGGGTCATATTTTGTGGGAAAAAAAACCGTGTTTTTAAACACTTTCTTTGATGAGACACAGGTTTTAAAAGTGAGAATAATTAAAAAAAACCTAAGTTTTCTCTCACTCTCTCAGTCCCATCTCCTCCCTGCGATGTTGCTCCTTCTTGCACTGCCACCAACTGCAACTCCGTTCTCGTCTGTGCATTCTCTTTTGTGCACTGCCGTCTGCAACGTGTTCTCCACCTTTCCCTGCCTGCCCTTTTTTTTTTTCATGTGGCCCTTACTTCCTCAGTTTCTGGTTTTATAGAAGAATCTGTTCTTTTTTCCCCCTGCCCTACCCTGTTTGAACCGTGTCGTGTAAAAATAACTTAGTTGAGTTATTTATAAACTTATGGATTGATGGTTATGAATTTTCAATCAACTTAGTTTAATGTTTTGATTTAGAGGATATTCGTGTATGACAGTTTTTATTCGTGTGTGTAGAAGTACAATTTTTCCCTTTGGTAGGATCTTATGAGCCATGTTACAATCCTCGGGTTACGATCTTTTATCCTCCTCCAGATCCATAGTAGAATCTCGAGTTTGACTACATTTTTGAAAGATTGAGCGCTTACCCCAAATGAGGGGAGCTCCATTGCAGATGCTTAGCTTTCTGGTTACATTGACCAGAGGCTAGTGAATAGTATTAACAGGGTTTTCGACCCTAATTAATACAAAATCATATTAAGATCACATGATTCTGATAGATTCCCACAAACATCTACACCTTTCATATAATTAAGACTGTTCATGCCACTACTTGTTGGTTATATATATGTGTTTATTTAATATATATAATTGTTATATCTACAGGGAATCCTTTTCTTTGAGAGAATGACTGACGAAGTTCTTGATAGTATTCGTGGACAGTTACAGGTTAGAAAAAGTATTCTTTAGCCATTCTTTCCCTTGACATGAGAAATACATCATCACGATTATTTATGCGTATTAAAAGCTTAGCTGGAAACTAAAATATATTTATGCTCCACTTTCCAAGTACCTTAGATTCATTGTATCACGAGCTCCTATCTAGGGAAACCTGCATCCATAAATAACTCTTGAAAAAACATGTCTGGGCACTTTTTACTGTCAAAAGTATCCTCAAATCTTGATTGAGCACTCGATGGTGTCAAGTTATTGATTTGGATGCAATATAAGAGACCTATTTTGAGGTGAAAGATGTTGTCTAAGTCTATGATGCGAAGGCGAAAATAATTGCCACAAAGCAAGGAAACAAATATGTCAAAGAATATGCCGACCAATATGATTGTTGACGATTGACAATCTTTCTTCTGACTAATGGTTACTCTCACTCTCATGCAAGATAATATTCAAATAGAAAAAGCATAAATATTTAGCAATTATGGTCAATCTAACCTGTTTAATCTTACCAATTAATCCGACAGGTCTGTTAATAAATTATGGTGAGATTGTAAAGTCATCTAGTTAAAGGCTAGTTATGCCTTATAGGGATGCAAACAAAGATTAATTCAATAATATCAAGAGAACATAAATCATAAATCAAAAGGGTGAAGAATACGTGTAAAATAACGTAAGATCCACAAACATAAGCGCTCGCACACACACACACACACACACGCATGGATAGATAAGTTTTGGTTAAATTATTACAGGCCCTTGAAATGAAGTATGAGGAAATGACTGGATTCCCAAGTCCTGAAAAGATAGAAAGTCGCAGAACAAGAAAGGTCCCTTCTGGTTTTGGGAAATCATGA

Protein sequence

>MS.gene87159.t1

MASLLPSHLLHHYQHHHRCSALAAIPNRFFHLTISSSSRTKSAFSASQNELASLGDLEFEAPLKIVKYPDPKLRKKNKRIGTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVSKYSMNRTLFNEGCLSFPGINADVKRPESVKIDARDVKGTRFSVSLSGLPARIFQHEFDHLQGILFFERMTDEVLDSIRGQLQALEMKYEEMTGFPSPEKIESRRTRKVPSGFGKS