AlfalfaGEDB | MS.gene43407

M. sativa cultivar XinJiangDaYe / MS.gene43407

KEGG: -
GO: -
PFAM: PF05421.14

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43407.t1	XP_003610582.1	95.9	194	5	1	1	194	1	191	1.30E-93	352.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43407.t1	G7JMV6	95.9	194	5	1	1	194	1	191	9.4e-94	352.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene43407	0.894048	3.56E-75	-1.69E-46
MS.gene049171	MS.gene43407	0.826932	2.07E-54	-1.69E-46
MS.gene049217	MS.gene43407	0.805346	1.40E-49	-1.69E-46
MS.gene049222	MS.gene43407	0.821613	3.68E-53	-1.69E-46
MS.gene049427	MS.gene43407	0.848235	6.98E-60	-1.69E-46
MS.gene049609	MS.gene43407	0.861418	1.04E-63	-1.69E-46
MS.gene049661	MS.gene43407	0.830748	2.47E-55	-1.69E-46
MS.gene049662	MS.gene43407	0.820618	6.24E-53	-1.69E-46
MS.gene049805	MS.gene43407	0.888993	3.61E-73	-1.69E-46
MS.gene050076	MS.gene43407	0.802971	4.35E-49	-1.69E-46
MS.gene050301	MS.gene43407	0.806703	7.23E-50	-1.69E-46
MS.gene050406	MS.gene43407	0.802011	6.87E-49	-1.69E-46
MS.gene050432	MS.gene43407	0.809953	1.47E-50	-1.69E-46
MS.gene050464	MS.gene43407	0.824243	8.97E-54	-1.69E-46
MS.gene050529	MS.gene43407	0.836623	8.40E-57	-1.69E-46
MS.gene050593	MS.gene43407	0.871495	6.54E-67	-1.69E-46
MS.gene050670	MS.gene43407	0.900442	7.30E-78	-1.69E-46
MS.gene050747	MS.gene43407	0.860235	2.38E-63	-1.69E-46
MS.gene050772	MS.gene43407	0.849871	2.45E-60	-1.69E-46
MS.gene050783	MS.gene43407	0.806723	7.16E-50	-1.69E-46
MS.gene050812	MS.gene43407	0.848519	5.82E-60	-1.69E-46
MS.gene05081	MS.gene43407	0.80735	5.28E-50	-1.69E-46
MS.gene050950	MS.gene43407	0.843984	1.00E-58	-1.69E-46
MS.gene05101	MS.gene43407	0.809804	1.58E-50	-1.69E-46
MS.gene05105	MS.gene43407	0.887974	8.90E-73	-1.69E-46
MS.gene051387	MS.gene43407	0.855582	5.73E-62	-1.69E-46
MS.gene051525	MS.gene43407	0.842251	2.90E-58	-1.69E-46
MS.gene051582	MS.gene43407	0.86473	9.85E-65	-1.69E-46
MS.gene051605	MS.gene43407	0.806387	8.43E-50	-1.69E-46
MS.gene051666	MS.gene43407	0.887535	1.31E-72	-1.69E-46
MS.gene051692	MS.gene43407	0.803915	2.78E-49	-1.69E-46
MS.gene051694	MS.gene43407	0.801533	8.61E-49	-1.69E-46
MS.gene051838	MS.gene43407	0.802238	6.17E-49	-1.69E-46
MS.gene051858	MS.gene43407	0.825161	5.45E-54	-1.69E-46
MS.gene051877	MS.gene43407	0.815875	7.39E-52	-1.69E-46
MS.gene052078	MS.gene43407	0.803162	3.98E-49	-1.69E-46
MS.gene052188	MS.gene43407	0.840422	8.78E-58	-1.69E-46
MS.gene052253	MS.gene43407	0.81679	4.61E-52	-1.69E-46
MS.gene052310	MS.gene43407	0.880072	7.42E-70	-1.69E-46
MS.gene052322	MS.gene43407	0.827572	1.45E-54	-1.69E-46
MS.gene052340	MS.gene43407	0.828407	9.15E-55	-1.69E-46
MS.gene05240	MS.gene43407	-0.802904	4.50E-49	-1.69E-46
MS.gene052414	MS.gene43407	0.833092	6.50E-56	-1.69E-46
MS.gene052421	MS.gene43407	0.896961	2.23E-76	-1.69E-46
MS.gene052481	MS.gene43407	0.859317	4.50E-63	-1.69E-46
MS.gene052484	MS.gene43407	0.827783	1.29E-54	-1.69E-46
MS.gene052485	MS.gene43407	0.840356	9.14E-58	-1.69E-46
MS.gene052501	MS.gene43407	0.87273	2.54E-67	-1.69E-46
MS.gene052503	MS.gene43407	0.828642	8.03E-55	-1.69E-46
MS.gene052505	MS.gene43407	0.875455	3.04E-68	-1.69E-46
MS.gene052615	MS.gene43407	0.82482	6.56E-54	-1.69E-46
MS.gene052823	MS.gene43407	0.820818	5.61E-53	-1.69E-46
MS.gene052825	MS.gene43407	0.813618	2.34E-51	-1.69E-46
MS.gene052982	MS.gene43407	0.843812	1.11E-58	-1.69E-46
MS.gene053103	MS.gene43407	0.879178	1.54E-69	-1.69E-46
MS.gene053104	MS.gene43407	0.851739	7.29E-61	-1.69E-46
MS.gene053107	MS.gene43407	0.807627	4.61E-50	-1.69E-46
MS.gene053207	MS.gene43407	0.826704	2.34E-54	-1.69E-46
MS.gene053213	MS.gene43407	0.834393	3.08E-56	-1.69E-46
MS.gene053286	MS.gene43407	0.816721	4.78E-52	-1.69E-46
MS.gene053322	MS.gene43407	0.84656	2.01E-59	-1.69E-46
MS.gene053436	MS.gene43407	0.810024	1.42E-50	-1.69E-46
MS.gene053449	MS.gene43407	0.801969	7.01E-49	-1.69E-46
MS.gene053574	MS.gene43407	0.842573	2.38E-58	-1.69E-46
MS.gene053579	MS.gene43407	0.831484	1.63E-55	-1.69E-46
MS.gene053632	MS.gene43407	0.834778	2.46E-56	-1.69E-46
MS.gene053824	MS.gene43407	0.80623	9.10E-50	-1.69E-46
MS.gene053912	MS.gene43407	0.81058	1.07E-50	-1.69E-46
MS.gene053916	MS.gene43407	0.828167	1.04E-54	-1.69E-46
MS.gene054123	MS.gene43407	0.802258	6.11E-49	-1.69E-46
MS.gene054408	MS.gene43407	0.819441	1.16E-52	-1.69E-46
MS.gene054642	MS.gene43407	0.811653	6.29E-51	-1.69E-46
MS.gene054719	MS.gene43407	0.812756	3.61E-51	-1.69E-46
MS.gene054802	MS.gene43407	0.805779	1.13E-49	-1.69E-46
MS.gene054803	MS.gene43407	0.800066	1.72E-48	-1.69E-46
MS.gene054804	MS.gene43407	0.805118	1.56E-49	-1.69E-46
MS.gene054927	MS.gene43407	0.849232	3.69E-60	-1.69E-46
MS.gene05505	MS.gene43407	0.869392	3.20E-66	-1.69E-46
MS.gene055116	MS.gene43407	0.875676	2.55E-68	-1.69E-46
MS.gene055206	MS.gene43407	0.834407	3.05E-56	-1.69E-46
MS.gene055224	MS.gene43407	0.802343	5.87E-49	-1.69E-46
MS.gene055289	MS.gene43407	0.838248	3.22E-57	-1.69E-46
MS.gene055369	MS.gene43407	0.811171	8.00E-51	-1.69E-46
MS.gene055370	MS.gene43407	0.825788	3.87E-54	-1.69E-46
MS.gene055412	MS.gene43407	0.819666	1.03E-52	-1.69E-46
MS.gene055502	MS.gene43407	0.828074	1.10E-54	-1.69E-46
MS.gene055539	MS.gene43407	0.803476	3.42E-49	-1.69E-46
MS.gene05553	MS.gene43407	0.819842	9.39E-53	-1.69E-46
MS.gene055647	MS.gene43407	0.800015	1.76E-48	-1.69E-46
MS.gene055722	MS.gene43407	0.823039	1.72E-53	-1.69E-46
MS.gene05592	MS.gene43407	0.838034	3.65E-57	-1.69E-46
MS.gene055941	MS.gene43407	0.812885	3.39E-51	-1.69E-46
MS.gene056166	MS.gene43407	0.802759	4.82E-49	-1.69E-46
MS.gene056191	MS.gene43407	0.80651	7.94E-50	-1.69E-46
MS.gene056407	MS.gene43407	0.871247	7.90E-67	-1.69E-46
MS.gene056497	MS.gene43407	0.832004	1.21E-55	-1.69E-46
MS.gene056511	MS.gene43407	0.865095	7.57E-65	-1.69E-46
MS.gene056514	MS.gene43407	0.806739	7.11E-50	-1.69E-46
MS.gene056899	MS.gene43407	-0.802117	6.53E-49	-1.69E-46
MS.gene057011	MS.gene43407	0.843338	1.49E-58	-1.69E-46
MS.gene05702	MS.gene43407	0.819129	1.37E-52	-1.69E-46
MS.gene057048	MS.gene43407	0.838576	2.65E-57	-1.69E-46
MS.gene057076	MS.gene43407	0.828243	1.00E-54	-1.69E-46
MS.gene057123	MS.gene43407	0.83712	6.27E-57	-1.69E-46
MS.gene057124	MS.gene43407	0.843833	1.10E-58	-1.69E-46
MS.gene057129	MS.gene43407	0.854705	1.03E-61	-1.69E-46
MS.gene057146	MS.gene43407	0.881366	2.55E-70	-1.69E-46
MS.gene057310	MS.gene43407	0.809056	2.28E-50	-1.69E-46
MS.gene057331	MS.gene43407	0.80116	1.03E-48	-1.69E-46
MS.gene057416	MS.gene43407	0.878796	2.10E-69	-1.69E-46
MS.gene057658	MS.gene43407	0.822389	2.43E-53	-1.69E-46
MS.gene057734	MS.gene43407	0.827746	1.32E-54	-1.69E-46
MS.gene057749	MS.gene43407	0.840167	1.02E-57	-1.69E-46
MS.gene057823	MS.gene43407	0.847233	1.32E-59	-1.69E-46
MS.gene057856	MS.gene43407	0.825062	5.75E-54	-1.69E-46
MS.gene058002	MS.gene43407	0.804894	1.74E-49	-1.69E-46
MS.gene058006	MS.gene43407	0.814351	1.61E-51	-1.69E-46
MS.gene058007	MS.gene43407	0.827335	1.66E-54	-1.69E-46
MS.gene058019	MS.gene43407	0.878938	1.87E-69	-1.69E-46
MS.gene058233	MS.gene43407	0.83942	1.60E-57	-1.69E-46
MS.gene058293	MS.gene43407	0.847794	9.23E-60	-1.69E-46
MS.gene058376	MS.gene43407	0.843384	1.45E-58	-1.69E-46
MS.gene058419	MS.gene43407	0.846322	2.34E-59	-1.69E-46
MS.gene058444	MS.gene43407	0.841665	4.14E-58	-1.69E-46
MS.gene058544	MS.gene43407	0.833322	5.70E-56	-1.69E-46
MS.gene058660	MS.gene43407	0.848521	5.81E-60	-1.69E-46
MS.gene058700	MS.gene43407	0.838858	2.24E-57	-1.69E-46
MS.gene058787	MS.gene43407	0.800613	1.33E-48	-1.69E-46
MS.gene058838	MS.gene43407	0.826635	2.43E-54	-1.69E-46
MS.gene05883	MS.gene43407	0.806735	7.12E-50	-1.69E-46
MS.gene058928	MS.gene43407	0.82716	1.82E-54	-1.69E-46
MS.gene059011	MS.gene43407	0.801899	7.24E-49	-1.69E-46
MS.gene059023	MS.gene43407	0.807187	5.71E-50	-1.69E-46
MS.gene05907	MS.gene43407	0.814704	1.35E-51	-1.69E-46
MS.gene059141	MS.gene43407	0.8522	5.40E-61	-1.69E-46
MS.gene05934	MS.gene43407	0.853636	2.10E-61	-1.69E-46
MS.gene059420	MS.gene43407	0.819018	1.45E-52	-1.69E-46
MS.gene059455	MS.gene43407	0.834783	2.46E-56	-1.69E-46
MS.gene059536	MS.gene43407	0.853667	2.05E-61	-1.69E-46
MS.gene059597	MS.gene43407	0.832215	1.07E-55	-1.69E-46
MS.gene059676	MS.gene43407	0.847857	8.87E-60	-1.69E-46
MS.gene059688	MS.gene43407	0.882076	1.41E-70	-1.69E-46
MS.gene059692	MS.gene43407	0.868895	4.65E-66	-1.69E-46
MS.gene059695	MS.gene43407	0.871435	6.85E-67	-1.69E-46
MS.gene059718	MS.gene43407	0.817568	3.08E-52	-1.69E-46
MS.gene059902	MS.gene43407	0.827013	1.98E-54	-1.69E-46
MS.gene059960	MS.gene43407	0.844517	7.20E-59	-1.69E-46
MS.gene060403	MS.gene43407	0.880034	7.65E-70	-1.69E-46
MS.gene060675	MS.gene43407	0.809255	2.07E-50	-1.69E-46
MS.gene060804	MS.gene43407	0.84432	8.13E-59	-1.69E-46
MS.gene060818	MS.gene43407	0.820171	7.90E-53	-1.69E-46
MS.gene060835	MS.gene43407	0.843023	1.81E-58	-1.69E-46
MS.gene060837	MS.gene43407	0.823382	1.43E-53	-1.69E-46
MS.gene06092	MS.gene43407	0.858914	5.94E-63	-1.69E-46
MS.gene061041	MS.gene43407	0.830519	2.81E-55	-1.69E-46
MS.gene061049	MS.gene43407	0.829791	4.22E-55	-1.69E-46
MS.gene061150	MS.gene43407	0.823336	1.46E-53	-1.69E-46
MS.gene061154	MS.gene43407	0.832911	7.21E-56	-1.69E-46
MS.gene061200	MS.gene43407	0.840679	7.52E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43407.t1	MTR_4g133770	95.876	194	5	1	1	194	1	191	1.50e-131	367

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene43407.t1	AT4G16410	63.478	115	40	2	80	193	71	184	6.83e-44	144

Find 39 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGAGGGGTTGGAGGAATT+TGG	0.164087	8.4:+1036497	None:intergenic
ATTCTCATCATTGCTATTCT+TGG	0.233178	8.4:-1036050	MS.gene43407:CDS
CACTTCTGGAAGAAGAGTTT+TGG	0.247345	8.4:-1036178	MS.gene43407:CDS
GAGCAAAAGGCATTGGCTTT+TGG	0.251573	8.4:-1036212	MS.gene43407:CDS
ATGATGAGAATTGCAGTAAT+TGG	0.254419	8.4:+1036062	None:intergenic
TGGACCTGAAGGACCACTTC+TGG	0.347564	8.4:-1036192	MS.gene43407:CDS
TCTTCCAGAAGTGGTCCTTC+AGG	0.352779	8.4:+1036188	None:intergenic
TTTAATGCCTAATACTTTGA+TGG	0.358229	8.4:+1036433	None:intergenic
AATTCAAAGATTGTGATAAT+AGG	0.375780	8.4:-1036278	MS.gene43407:CDS
AGAAATGGAAGTTTCATTGA+TGG	0.380684	8.4:+1036311	None:intergenic
ATCAAACCCATCAAAGTATT+AGG	0.381123	8.4:-1036440	MS.gene43407:CDS
CCACAGTTGGTGTGTGTTTG+AGG	0.388523	8.4:+1036351	None:intergenic
GGTGTGTGTTTGAGGAAAAT+TGG	0.393174	8.4:+1036359	None:intergenic
TTCTCAAGTCCTTACTGCTA+TGG	0.416025	8.4:-1036009	MS.gene43407:CDS
CTCATCATTGCTATTCTTGG+AGG	0.417146	8.4:-1036047	MS.gene43407:CDS
ATCATTGCTATTCTTGGAGG+TGG	0.422996	8.4:-1036044	MS.gene43407:CDS
CTTTGTGCATCTTCCACAGT+TGG	0.439217	8.4:+1036338	None:intergenic
GAAAAGAGAACAAGAGGGGT+TGG	0.443409	8.4:+1036487	None:intergenic
GAATGGAATGGATGAGCAAA+AGG	0.459747	8.4:-1036225	MS.gene43407:CDS
AAGAGAACAAGAGGGGTTGG+AGG	0.462285	8.4:+1036490	None:intergenic
TTAATGCCTAATACTTTGAT+GGG	0.463239	8.4:+1036434	None:intergenic
TGGGTTTGATAAATACTTGA+TGG	0.474365	8.4:+1036453	None:intergenic
TGGGACAACGTGAGAAGGTA+TGG	0.479294	8.4:-1036158	MS.gene43407:CDS
AACTGTGGAAGATGCACAAA+GGG	0.491879	8.4:-1036336	MS.gene43407:CDS
GGTTGGAGGAATTTGGAAGC+TGG	0.507532	8.4:+1036504	None:intergenic
TTCTTGAGAAGCTCAAATAT+AGG	0.508858	8.4:+1036086	None:intergenic
ATAATAGGAGCAGTTTCTGT+TGG	0.516609	8.4:-1036263	MS.gene43407:CDS
AGGTGCAATATACACAATCT+TGG	0.535873	8.4:-1036111	MS.gene43407:CDS
CAAGTCCTTACTGCTATGGT+TGG	0.540150	8.4:-1036005	MS.gene43407:CDS
CAAAACTCTTCTTCCAGAAG+TGG	0.542465	8.4:+1036179	None:intergenic
TTTGTTGGTTCTGAATGGAA+TGG	0.544407	8.4:-1036237	MS.gene43407:CDS
TGGAGTGAAAAGAGAACAAG+AGG	0.556434	8.4:+1036481	None:intergenic
TATGCACTAACTGTTAGTAC+AGG	0.569987	8.4:-1036131	MS.gene43407:CDS
AATGGATGAGCAAAAGGCAT+TGG	0.578741	8.4:-1036219	MS.gene43407:CDS
AAACGCCAACCATAGCAGTA+AGG	0.591938	8.4:+1036000	None:intergenic
CCTCAAACACACACCAACTG+TGG	0.606028	8.4:-1036351	MS.gene43407:CDS
GAGTGAAAAGAGAACAAGAG+GGG	0.620816	8.4:+1036483	None:intergenic
CAACTGTGGAAGATGCACAA+AGG	0.630847	8.4:-1036337	MS.gene43407:CDS
GGAGTGAAAAGAGAACAAGA+GGG	0.645371	8.4:+1036482	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATTCAAAGATTGTGATAAT+AGG	-	chr8.4:1036226-1036245	MS.gene43407:CDS	20.0%
!!!	AGTTTTATTGCATATTTTGA+AGG	+	chr8.4:1036112-1036131	None:intergenic	20.0%
!!!	ATAAATACTTGATGGTTTTT+TGG	+	chr8.4:1036046-1036065	None:intergenic	20.0%
!	TTAATGCCTAATACTTTGAT+GGG	+	chr8.4:1036073-1036092	None:intergenic	25.0%
!	TTTAATGCCTAATACTTTGA+TGG	+	chr8.4:1036074-1036093	None:intergenic	25.0%
!!!	GAATTCTCATTTTCAAGAAA+TGG	+	chr8.4:1036211-1036230	None:intergenic	25.0%
!!!	TTATTGCATATTTTGAAGGT+GGG	+	chr8.4:1036108-1036127	None:intergenic	25.0%
!!!	TTTATTGCATATTTTGAAGG+TGG	+	chr8.4:1036109-1036128	None:intergenic	25.0%
	AGAAATGGAAGTTTCATTGA+TGG	+	chr8.4:1036196-1036215	None:intergenic	30.0%
	ATGATGAGAATTGCAGTAAT+TGG	+	chr8.4:1036445-1036464	None:intergenic	30.0%
	TGGGTTTGATAAATACTTGA+TGG	+	chr8.4:1036054-1036073	None:intergenic	30.0%
	TTCTTGAGAAGCTCAAATAT+AGG	+	chr8.4:1036421-1036440	None:intergenic	30.0%
!	AGTTTCTGTTGGAATTTTGT+TGG	-	chr8.4:1036252-1036271	MS.gene43407:CDS	30.0%
!	ATCAAACCCATCAAAGTATT+AGG	-	chr8.4:1036064-1036083	MS.gene43407:CDS	30.0%
!	ATTCTCATCATTGCTATTCT+TGG	-	chr8.4:1036454-1036473	MS.gene43407:CDS	30.0%
	AGGTGCAATATACACAATCT+TGG	-	chr8.4:1036393-1036412	MS.gene43407:CDS	35.0%
	ATAATAGGAGCAGTTTCTGT+TGG	-	chr8.4:1036241-1036260	MS.gene43407:CDS	35.0%
	TATGCACTAACTGTTAGTAC+AGG	-	chr8.4:1036373-1036392	MS.gene43407:CDS	35.0%
!!	ACTTCTGGAAGAAGAGTTTT+GGG	-	chr8.4:1036327-1036346	MS.gene43407:CDS	35.0%
!!	TTTGTTGGTTCTGAATGGAA+TGG	-	chr8.4:1036267-1036286	MS.gene43407:CDS	35.0%
!!!	GGAATTTTGTTGGTTCTGAA+TGG	-	chr8.4:1036262-1036281	MS.gene43407:CDS	35.0%
	AACTGTGGAAGATGCACAAA+GGG	-	chr8.4:1036168-1036187	MS.gene43407:CDS	40.0%
	CAAAACTCTTCTTCCAGAAG+TGG	+	chr8.4:1036328-1036347	None:intergenic	40.0%
	GAATGGAATGGATGAGCAAA+AGG	-	chr8.4:1036279-1036298	MS.gene43407:CDS	40.0%
	GAGTGAAAAGAGAACAAGAG+GGG	+	chr8.4:1036024-1036043	None:intergenic	40.0%
	GGAGTGAAAAGAGAACAAGA+GGG	+	chr8.4:1036025-1036044	None:intergenic	40.0%
	GGTGTGTGTTTGAGGAAAAT+TGG	+	chr8.4:1036148-1036167	None:intergenic	40.0%
	TGGAGTGAAAAGAGAACAAG+AGG	+	chr8.4:1036026-1036045	None:intergenic	40.0%
	TTCTCAAGTCCTTACTGCTA+TGG	-	chr8.4:1036495-1036514	MS.gene43407:CDS	40.0%
!	AATGGATGAGCAAAAGGCAT+TGG	-	chr8.4:1036285-1036304	MS.gene43407:CDS	40.0%
!	ATCATTGCTATTCTTGGAGG+TGG	-	chr8.4:1036460-1036479	MS.gene43407:CDS	40.0%
!	CTCATCATTGCTATTCTTGG+AGG	-	chr8.4:1036457-1036476	MS.gene43407:CDS	40.0%
!!	CACTTCTGGAAGAAGAGTTT+TGG	-	chr8.4:1036326-1036345	MS.gene43407:CDS	40.0%
	AAACGCCAACCATAGCAGTA+AGG	+	chr8.4:1036507-1036526	None:intergenic	45.0%
	CAACTGTGGAAGATGCACAA+AGG	-	chr8.4:1036167-1036186	MS.gene43407:CDS	45.0%
	CAAGTCCTTACTGCTATGGT+TGG	-	chr8.4:1036499-1036518	MS.gene43407:CDS	45.0%
	CTTTGTGCATCTTCCACAGT+TGG	+	chr8.4:1036169-1036188	None:intergenic	45.0%
	GAAAAGAGAACAAGAGGGGT+TGG	+	chr8.4:1036020-1036039	None:intergenic	45.0%
!!!	AGTTTTGGGACAACGTGAGA+AGG	-	chr8.4:1036341-1036360	MS.gene43407:CDS	45.0%
!!!	GAGCAAAAGGCATTGGCTTT+TGG	-	chr8.4:1036292-1036311	MS.gene43407:CDS	45.0%
	AAGAGAACAAGAGGGGTTGG+AGG	+	chr8.4:1036017-1036036	None:intergenic	50.0%
	CAAGAGGGGTTGGAGGAATT+TGG	+	chr8.4:1036010-1036029	None:intergenic	50.0%
	CCTCAAACACACACCAACTG+TGG	-	chr8.4:1036153-1036172	MS.gene43407:CDS	50.0%
	GGTTGGAGGAATTTGGAAGC+TGG	+	chr8.4:1036003-1036022	None:intergenic	50.0%
	TCTTCCAGAAGTGGTCCTTC+AGG	+	chr8.4:1036319-1036338	None:intergenic	50.0%
	TGGGACAACGTGAGAAGGTA+TGG	-	chr8.4:1036346-1036365	MS.gene43407:CDS	50.0%
!	CCACAGTTGGTGTGTGTTTG+AGG	+	chr8.4:1036156-1036175	None:intergenic	50.0%
!!!	GCATTGGCTTTTGGACCTGA+AGG	-	chr8.4:1036301-1036320	MS.gene43407:CDS	50.0%
	TGGACCTGAAGGACCACTTC+TGG	-	chr8.4:1036312-1036331	MS.gene43407:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	1035971	1036555	1035971	ID=MS.gene43407
chr8.4	mRNA	1035971	1036555	1035971	ID=MS.gene43407.t1;Parent=MS.gene43407
chr8.4	exon	1035971	1036555	1035971	ID=MS.gene43407.t1.exon1;Parent=MS.gene43407.t1
chr8.4	CDS	1035971	1036555	1035971	ID=cds.MS.gene43407.t1;Parent=MS.gene43407.t1

Gene Sequence

>MS.gene43407

ATGAAAAATCTTAGCTTGAAATTAAAGCTCCAGCTTCCAAATTCCTCCAACCCCTCTTGTTCTCTTTTCACTCCAAAAAACCATCAAGTATTTATCAAACCCATCAAAGTATTAGGCATTAAAAACTTCAAAAACCCACCTTCAAAATATGCAATAAAACTTAGAGAAGCTTCTCCAATTTTCCTCAAACACACACCAACTGTGGAAGATGCACAAAGGGCACCATCAATGAAACTTCCATTTCTTGAAAATGAGAATTCAAAGATTGTGATAATAGGAGCAGTTTCTGTTGGAATTTTGTTGGTTCTGAATGGAATGGATGAGCAAAAGGCATTGGCTTTTGGACCTGAAGGACCACTTCTGGAAGAAGAGTTTTGGGACAACGTGAGAAGGTATGGTTTGTATGCACTAACTGTTAGTACAGGTGCAATATACACAATCTTGGTGCCTATATTTGAGCTTCTCAAGAATCCAATTACTGCAATTCTCATCATTGCTATTCTTGGAGGTGGTTTCTACATTGTTTCTCAAGTCCTTACTGCTATGGTTGGCGTTTCTGATTTTAGTTATGATTATGCAAACTAG

Protein sequence

>MS.gene43407.t1

MKNLSLKLKLQLPNSSNPSCSLFTPKNHQVFIKPIKVLGIKNFKNPPSKYAIKLREASPIFLKHTPTVEDAQRAPSMKLPFLENENSKIVIIGAVSVGILLVLNGMDEQKALAFGPEGPLLEEEFWDNVRRYGLYALTVSTGAIYTILVPIFELLKNPITAILIIAILGGGFYIVSQVLTAMVGVSDFSYDYAN