Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43407.t1 | XP_003610582.1 | 95.9 | 194 | 5 | 1 | 1 | 194 | 1 | 191 | 1.30E-93 | 352.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43407.t1 | G7JMV6 | 95.9 | 194 | 5 | 1 | 1 | 194 | 1 | 191 | 9.4e-94 | 352.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene43407 | 0.894048 | 3.56E-75 | -1.69E-46 |
MS.gene049171 | MS.gene43407 | 0.826932 | 2.07E-54 | -1.69E-46 |
MS.gene049217 | MS.gene43407 | 0.805346 | 1.40E-49 | -1.69E-46 |
MS.gene049222 | MS.gene43407 | 0.821613 | 3.68E-53 | -1.69E-46 |
MS.gene049427 | MS.gene43407 | 0.848235 | 6.98E-60 | -1.69E-46 |
MS.gene049609 | MS.gene43407 | 0.861418 | 1.04E-63 | -1.69E-46 |
MS.gene049661 | MS.gene43407 | 0.830748 | 2.47E-55 | -1.69E-46 |
MS.gene049662 | MS.gene43407 | 0.820618 | 6.24E-53 | -1.69E-46 |
MS.gene049805 | MS.gene43407 | 0.888993 | 3.61E-73 | -1.69E-46 |
MS.gene050076 | MS.gene43407 | 0.802971 | 4.35E-49 | -1.69E-46 |
MS.gene050301 | MS.gene43407 | 0.806703 | 7.23E-50 | -1.69E-46 |
MS.gene050406 | MS.gene43407 | 0.802011 | 6.87E-49 | -1.69E-46 |
MS.gene050432 | MS.gene43407 | 0.809953 | 1.47E-50 | -1.69E-46 |
MS.gene050464 | MS.gene43407 | 0.824243 | 8.97E-54 | -1.69E-46 |
MS.gene050529 | MS.gene43407 | 0.836623 | 8.40E-57 | -1.69E-46 |
MS.gene050593 | MS.gene43407 | 0.871495 | 6.54E-67 | -1.69E-46 |
MS.gene050670 | MS.gene43407 | 0.900442 | 7.30E-78 | -1.69E-46 |
MS.gene050747 | MS.gene43407 | 0.860235 | 2.38E-63 | -1.69E-46 |
MS.gene050772 | MS.gene43407 | 0.849871 | 2.45E-60 | -1.69E-46 |
MS.gene050783 | MS.gene43407 | 0.806723 | 7.16E-50 | -1.69E-46 |
MS.gene050812 | MS.gene43407 | 0.848519 | 5.82E-60 | -1.69E-46 |
MS.gene05081 | MS.gene43407 | 0.80735 | 5.28E-50 | -1.69E-46 |
MS.gene050950 | MS.gene43407 | 0.843984 | 1.00E-58 | -1.69E-46 |
MS.gene05101 | MS.gene43407 | 0.809804 | 1.58E-50 | -1.69E-46 |
MS.gene05105 | MS.gene43407 | 0.887974 | 8.90E-73 | -1.69E-46 |
MS.gene051387 | MS.gene43407 | 0.855582 | 5.73E-62 | -1.69E-46 |
MS.gene051525 | MS.gene43407 | 0.842251 | 2.90E-58 | -1.69E-46 |
MS.gene051582 | MS.gene43407 | 0.86473 | 9.85E-65 | -1.69E-46 |
MS.gene051605 | MS.gene43407 | 0.806387 | 8.43E-50 | -1.69E-46 |
MS.gene051666 | MS.gene43407 | 0.887535 | 1.31E-72 | -1.69E-46 |
MS.gene051692 | MS.gene43407 | 0.803915 | 2.78E-49 | -1.69E-46 |
MS.gene051694 | MS.gene43407 | 0.801533 | 8.61E-49 | -1.69E-46 |
MS.gene051838 | MS.gene43407 | 0.802238 | 6.17E-49 | -1.69E-46 |
MS.gene051858 | MS.gene43407 | 0.825161 | 5.45E-54 | -1.69E-46 |
MS.gene051877 | MS.gene43407 | 0.815875 | 7.39E-52 | -1.69E-46 |
MS.gene052078 | MS.gene43407 | 0.803162 | 3.98E-49 | -1.69E-46 |
MS.gene052188 | MS.gene43407 | 0.840422 | 8.78E-58 | -1.69E-46 |
MS.gene052253 | MS.gene43407 | 0.81679 | 4.61E-52 | -1.69E-46 |
MS.gene052310 | MS.gene43407 | 0.880072 | 7.42E-70 | -1.69E-46 |
MS.gene052322 | MS.gene43407 | 0.827572 | 1.45E-54 | -1.69E-46 |
MS.gene052340 | MS.gene43407 | 0.828407 | 9.15E-55 | -1.69E-46 |
MS.gene05240 | MS.gene43407 | -0.802904 | 4.50E-49 | -1.69E-46 |
MS.gene052414 | MS.gene43407 | 0.833092 | 6.50E-56 | -1.69E-46 |
MS.gene052421 | MS.gene43407 | 0.896961 | 2.23E-76 | -1.69E-46 |
MS.gene052481 | MS.gene43407 | 0.859317 | 4.50E-63 | -1.69E-46 |
MS.gene052484 | MS.gene43407 | 0.827783 | 1.29E-54 | -1.69E-46 |
MS.gene052485 | MS.gene43407 | 0.840356 | 9.14E-58 | -1.69E-46 |
MS.gene052501 | MS.gene43407 | 0.87273 | 2.54E-67 | -1.69E-46 |
MS.gene052503 | MS.gene43407 | 0.828642 | 8.03E-55 | -1.69E-46 |
MS.gene052505 | MS.gene43407 | 0.875455 | 3.04E-68 | -1.69E-46 |
MS.gene052615 | MS.gene43407 | 0.82482 | 6.56E-54 | -1.69E-46 |
MS.gene052823 | MS.gene43407 | 0.820818 | 5.61E-53 | -1.69E-46 |
MS.gene052825 | MS.gene43407 | 0.813618 | 2.34E-51 | -1.69E-46 |
MS.gene052982 | MS.gene43407 | 0.843812 | 1.11E-58 | -1.69E-46 |
MS.gene053103 | MS.gene43407 | 0.879178 | 1.54E-69 | -1.69E-46 |
MS.gene053104 | MS.gene43407 | 0.851739 | 7.29E-61 | -1.69E-46 |
MS.gene053107 | MS.gene43407 | 0.807627 | 4.61E-50 | -1.69E-46 |
MS.gene053207 | MS.gene43407 | 0.826704 | 2.34E-54 | -1.69E-46 |
MS.gene053213 | MS.gene43407 | 0.834393 | 3.08E-56 | -1.69E-46 |
MS.gene053286 | MS.gene43407 | 0.816721 | 4.78E-52 | -1.69E-46 |
MS.gene053322 | MS.gene43407 | 0.84656 | 2.01E-59 | -1.69E-46 |
MS.gene053436 | MS.gene43407 | 0.810024 | 1.42E-50 | -1.69E-46 |
MS.gene053449 | MS.gene43407 | 0.801969 | 7.01E-49 | -1.69E-46 |
MS.gene053574 | MS.gene43407 | 0.842573 | 2.38E-58 | -1.69E-46 |
MS.gene053579 | MS.gene43407 | 0.831484 | 1.63E-55 | -1.69E-46 |
MS.gene053632 | MS.gene43407 | 0.834778 | 2.46E-56 | -1.69E-46 |
MS.gene053824 | MS.gene43407 | 0.80623 | 9.10E-50 | -1.69E-46 |
MS.gene053912 | MS.gene43407 | 0.81058 | 1.07E-50 | -1.69E-46 |
MS.gene053916 | MS.gene43407 | 0.828167 | 1.04E-54 | -1.69E-46 |
MS.gene054123 | MS.gene43407 | 0.802258 | 6.11E-49 | -1.69E-46 |
MS.gene054408 | MS.gene43407 | 0.819441 | 1.16E-52 | -1.69E-46 |
MS.gene054642 | MS.gene43407 | 0.811653 | 6.29E-51 | -1.69E-46 |
MS.gene054719 | MS.gene43407 | 0.812756 | 3.61E-51 | -1.69E-46 |
MS.gene054802 | MS.gene43407 | 0.805779 | 1.13E-49 | -1.69E-46 |
MS.gene054803 | MS.gene43407 | 0.800066 | 1.72E-48 | -1.69E-46 |
MS.gene054804 | MS.gene43407 | 0.805118 | 1.56E-49 | -1.69E-46 |
MS.gene054927 | MS.gene43407 | 0.849232 | 3.69E-60 | -1.69E-46 |
MS.gene05505 | MS.gene43407 | 0.869392 | 3.20E-66 | -1.69E-46 |
MS.gene055116 | MS.gene43407 | 0.875676 | 2.55E-68 | -1.69E-46 |
MS.gene055206 | MS.gene43407 | 0.834407 | 3.05E-56 | -1.69E-46 |
MS.gene055224 | MS.gene43407 | 0.802343 | 5.87E-49 | -1.69E-46 |
MS.gene055289 | MS.gene43407 | 0.838248 | 3.22E-57 | -1.69E-46 |
MS.gene055369 | MS.gene43407 | 0.811171 | 8.00E-51 | -1.69E-46 |
MS.gene055370 | MS.gene43407 | 0.825788 | 3.87E-54 | -1.69E-46 |
MS.gene055412 | MS.gene43407 | 0.819666 | 1.03E-52 | -1.69E-46 |
MS.gene055502 | MS.gene43407 | 0.828074 | 1.10E-54 | -1.69E-46 |
MS.gene055539 | MS.gene43407 | 0.803476 | 3.42E-49 | -1.69E-46 |
MS.gene05553 | MS.gene43407 | 0.819842 | 9.39E-53 | -1.69E-46 |
MS.gene055647 | MS.gene43407 | 0.800015 | 1.76E-48 | -1.69E-46 |
MS.gene055722 | MS.gene43407 | 0.823039 | 1.72E-53 | -1.69E-46 |
MS.gene05592 | MS.gene43407 | 0.838034 | 3.65E-57 | -1.69E-46 |
MS.gene055941 | MS.gene43407 | 0.812885 | 3.39E-51 | -1.69E-46 |
MS.gene056166 | MS.gene43407 | 0.802759 | 4.82E-49 | -1.69E-46 |
MS.gene056191 | MS.gene43407 | 0.80651 | 7.94E-50 | -1.69E-46 |
MS.gene056407 | MS.gene43407 | 0.871247 | 7.90E-67 | -1.69E-46 |
MS.gene056497 | MS.gene43407 | 0.832004 | 1.21E-55 | -1.69E-46 |
MS.gene056511 | MS.gene43407 | 0.865095 | 7.57E-65 | -1.69E-46 |
MS.gene056514 | MS.gene43407 | 0.806739 | 7.11E-50 | -1.69E-46 |
MS.gene056899 | MS.gene43407 | -0.802117 | 6.53E-49 | -1.69E-46 |
MS.gene057011 | MS.gene43407 | 0.843338 | 1.49E-58 | -1.69E-46 |
MS.gene05702 | MS.gene43407 | 0.819129 | 1.37E-52 | -1.69E-46 |
MS.gene057048 | MS.gene43407 | 0.838576 | 2.65E-57 | -1.69E-46 |
MS.gene057076 | MS.gene43407 | 0.828243 | 1.00E-54 | -1.69E-46 |
MS.gene057123 | MS.gene43407 | 0.83712 | 6.27E-57 | -1.69E-46 |
MS.gene057124 | MS.gene43407 | 0.843833 | 1.10E-58 | -1.69E-46 |
MS.gene057129 | MS.gene43407 | 0.854705 | 1.03E-61 | -1.69E-46 |
MS.gene057146 | MS.gene43407 | 0.881366 | 2.55E-70 | -1.69E-46 |
MS.gene057310 | MS.gene43407 | 0.809056 | 2.28E-50 | -1.69E-46 |
MS.gene057331 | MS.gene43407 | 0.80116 | 1.03E-48 | -1.69E-46 |
MS.gene057416 | MS.gene43407 | 0.878796 | 2.10E-69 | -1.69E-46 |
MS.gene057658 | MS.gene43407 | 0.822389 | 2.43E-53 | -1.69E-46 |
MS.gene057734 | MS.gene43407 | 0.827746 | 1.32E-54 | -1.69E-46 |
MS.gene057749 | MS.gene43407 | 0.840167 | 1.02E-57 | -1.69E-46 |
MS.gene057823 | MS.gene43407 | 0.847233 | 1.32E-59 | -1.69E-46 |
MS.gene057856 | MS.gene43407 | 0.825062 | 5.75E-54 | -1.69E-46 |
MS.gene058002 | MS.gene43407 | 0.804894 | 1.74E-49 | -1.69E-46 |
MS.gene058006 | MS.gene43407 | 0.814351 | 1.61E-51 | -1.69E-46 |
MS.gene058007 | MS.gene43407 | 0.827335 | 1.66E-54 | -1.69E-46 |
MS.gene058019 | MS.gene43407 | 0.878938 | 1.87E-69 | -1.69E-46 |
MS.gene058233 | MS.gene43407 | 0.83942 | 1.60E-57 | -1.69E-46 |
MS.gene058293 | MS.gene43407 | 0.847794 | 9.23E-60 | -1.69E-46 |
MS.gene058376 | MS.gene43407 | 0.843384 | 1.45E-58 | -1.69E-46 |
MS.gene058419 | MS.gene43407 | 0.846322 | 2.34E-59 | -1.69E-46 |
MS.gene058444 | MS.gene43407 | 0.841665 | 4.14E-58 | -1.69E-46 |
MS.gene058544 | MS.gene43407 | 0.833322 | 5.70E-56 | -1.69E-46 |
MS.gene058660 | MS.gene43407 | 0.848521 | 5.81E-60 | -1.69E-46 |
MS.gene058700 | MS.gene43407 | 0.838858 | 2.24E-57 | -1.69E-46 |
MS.gene058787 | MS.gene43407 | 0.800613 | 1.33E-48 | -1.69E-46 |
MS.gene058838 | MS.gene43407 | 0.826635 | 2.43E-54 | -1.69E-46 |
MS.gene05883 | MS.gene43407 | 0.806735 | 7.12E-50 | -1.69E-46 |
MS.gene058928 | MS.gene43407 | 0.82716 | 1.82E-54 | -1.69E-46 |
MS.gene059011 | MS.gene43407 | 0.801899 | 7.24E-49 | -1.69E-46 |
MS.gene059023 | MS.gene43407 | 0.807187 | 5.71E-50 | -1.69E-46 |
MS.gene05907 | MS.gene43407 | 0.814704 | 1.35E-51 | -1.69E-46 |
MS.gene059141 | MS.gene43407 | 0.8522 | 5.40E-61 | -1.69E-46 |
MS.gene05934 | MS.gene43407 | 0.853636 | 2.10E-61 | -1.69E-46 |
MS.gene059420 | MS.gene43407 | 0.819018 | 1.45E-52 | -1.69E-46 |
MS.gene059455 | MS.gene43407 | 0.834783 | 2.46E-56 | -1.69E-46 |
MS.gene059536 | MS.gene43407 | 0.853667 | 2.05E-61 | -1.69E-46 |
MS.gene059597 | MS.gene43407 | 0.832215 | 1.07E-55 | -1.69E-46 |
MS.gene059676 | MS.gene43407 | 0.847857 | 8.87E-60 | -1.69E-46 |
MS.gene059688 | MS.gene43407 | 0.882076 | 1.41E-70 | -1.69E-46 |
MS.gene059692 | MS.gene43407 | 0.868895 | 4.65E-66 | -1.69E-46 |
MS.gene059695 | MS.gene43407 | 0.871435 | 6.85E-67 | -1.69E-46 |
MS.gene059718 | MS.gene43407 | 0.817568 | 3.08E-52 | -1.69E-46 |
MS.gene059902 | MS.gene43407 | 0.827013 | 1.98E-54 | -1.69E-46 |
MS.gene059960 | MS.gene43407 | 0.844517 | 7.20E-59 | -1.69E-46 |
MS.gene060403 | MS.gene43407 | 0.880034 | 7.65E-70 | -1.69E-46 |
MS.gene060675 | MS.gene43407 | 0.809255 | 2.07E-50 | -1.69E-46 |
MS.gene060804 | MS.gene43407 | 0.84432 | 8.13E-59 | -1.69E-46 |
MS.gene060818 | MS.gene43407 | 0.820171 | 7.90E-53 | -1.69E-46 |
MS.gene060835 | MS.gene43407 | 0.843023 | 1.81E-58 | -1.69E-46 |
MS.gene060837 | MS.gene43407 | 0.823382 | 1.43E-53 | -1.69E-46 |
MS.gene06092 | MS.gene43407 | 0.858914 | 5.94E-63 | -1.69E-46 |
MS.gene061041 | MS.gene43407 | 0.830519 | 2.81E-55 | -1.69E-46 |
MS.gene061049 | MS.gene43407 | 0.829791 | 4.22E-55 | -1.69E-46 |
MS.gene061150 | MS.gene43407 | 0.823336 | 1.46E-53 | -1.69E-46 |
MS.gene061154 | MS.gene43407 | 0.832911 | 7.21E-56 | -1.69E-46 |
MS.gene061200 | MS.gene43407 | 0.840679 | 7.52E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43407.t1 | MTR_4g133770 | 95.876 | 194 | 5 | 1 | 1 | 194 | 1 | 191 | 1.50e-131 | 367 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43407.t1 | AT4G16410 | 63.478 | 115 | 40 | 2 | 80 | 193 | 71 | 184 | 6.83e-44 | 144 |
Find 39 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGAGGGGTTGGAGGAATT+TGG | 0.164087 | 8.4:+1036497 | None:intergenic |
ATTCTCATCATTGCTATTCT+TGG | 0.233178 | 8.4:-1036050 | MS.gene43407:CDS |
CACTTCTGGAAGAAGAGTTT+TGG | 0.247345 | 8.4:-1036178 | MS.gene43407:CDS |
GAGCAAAAGGCATTGGCTTT+TGG | 0.251573 | 8.4:-1036212 | MS.gene43407:CDS |
ATGATGAGAATTGCAGTAAT+TGG | 0.254419 | 8.4:+1036062 | None:intergenic |
TGGACCTGAAGGACCACTTC+TGG | 0.347564 | 8.4:-1036192 | MS.gene43407:CDS |
TCTTCCAGAAGTGGTCCTTC+AGG | 0.352779 | 8.4:+1036188 | None:intergenic |
TTTAATGCCTAATACTTTGA+TGG | 0.358229 | 8.4:+1036433 | None:intergenic |
AATTCAAAGATTGTGATAAT+AGG | 0.375780 | 8.4:-1036278 | MS.gene43407:CDS |
AGAAATGGAAGTTTCATTGA+TGG | 0.380684 | 8.4:+1036311 | None:intergenic |
ATCAAACCCATCAAAGTATT+AGG | 0.381123 | 8.4:-1036440 | MS.gene43407:CDS |
CCACAGTTGGTGTGTGTTTG+AGG | 0.388523 | 8.4:+1036351 | None:intergenic |
GGTGTGTGTTTGAGGAAAAT+TGG | 0.393174 | 8.4:+1036359 | None:intergenic |
TTCTCAAGTCCTTACTGCTA+TGG | 0.416025 | 8.4:-1036009 | MS.gene43407:CDS |
CTCATCATTGCTATTCTTGG+AGG | 0.417146 | 8.4:-1036047 | MS.gene43407:CDS |
ATCATTGCTATTCTTGGAGG+TGG | 0.422996 | 8.4:-1036044 | MS.gene43407:CDS |
CTTTGTGCATCTTCCACAGT+TGG | 0.439217 | 8.4:+1036338 | None:intergenic |
GAAAAGAGAACAAGAGGGGT+TGG | 0.443409 | 8.4:+1036487 | None:intergenic |
GAATGGAATGGATGAGCAAA+AGG | 0.459747 | 8.4:-1036225 | MS.gene43407:CDS |
AAGAGAACAAGAGGGGTTGG+AGG | 0.462285 | 8.4:+1036490 | None:intergenic |
TTAATGCCTAATACTTTGAT+GGG | 0.463239 | 8.4:+1036434 | None:intergenic |
TGGGTTTGATAAATACTTGA+TGG | 0.474365 | 8.4:+1036453 | None:intergenic |
TGGGACAACGTGAGAAGGTA+TGG | 0.479294 | 8.4:-1036158 | MS.gene43407:CDS |
AACTGTGGAAGATGCACAAA+GGG | 0.491879 | 8.4:-1036336 | MS.gene43407:CDS |
GGTTGGAGGAATTTGGAAGC+TGG | 0.507532 | 8.4:+1036504 | None:intergenic |
TTCTTGAGAAGCTCAAATAT+AGG | 0.508858 | 8.4:+1036086 | None:intergenic |
ATAATAGGAGCAGTTTCTGT+TGG | 0.516609 | 8.4:-1036263 | MS.gene43407:CDS |
AGGTGCAATATACACAATCT+TGG | 0.535873 | 8.4:-1036111 | MS.gene43407:CDS |
CAAGTCCTTACTGCTATGGT+TGG | 0.540150 | 8.4:-1036005 | MS.gene43407:CDS |
CAAAACTCTTCTTCCAGAAG+TGG | 0.542465 | 8.4:+1036179 | None:intergenic |
TTTGTTGGTTCTGAATGGAA+TGG | 0.544407 | 8.4:-1036237 | MS.gene43407:CDS |
TGGAGTGAAAAGAGAACAAG+AGG | 0.556434 | 8.4:+1036481 | None:intergenic |
TATGCACTAACTGTTAGTAC+AGG | 0.569987 | 8.4:-1036131 | MS.gene43407:CDS |
AATGGATGAGCAAAAGGCAT+TGG | 0.578741 | 8.4:-1036219 | MS.gene43407:CDS |
AAACGCCAACCATAGCAGTA+AGG | 0.591938 | 8.4:+1036000 | None:intergenic |
CCTCAAACACACACCAACTG+TGG | 0.606028 | 8.4:-1036351 | MS.gene43407:CDS |
GAGTGAAAAGAGAACAAGAG+GGG | 0.620816 | 8.4:+1036483 | None:intergenic |
CAACTGTGGAAGATGCACAA+AGG | 0.630847 | 8.4:-1036337 | MS.gene43407:CDS |
GGAGTGAAAAGAGAACAAGA+GGG | 0.645371 | 8.4:+1036482 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCAAAGATTGTGATAAT+AGG | - | chr8.4:1036226-1036245 | MS.gene43407:CDS | 20.0% |
!!! | AGTTTTATTGCATATTTTGA+AGG | + | chr8.4:1036112-1036131 | None:intergenic | 20.0% |
!!! | ATAAATACTTGATGGTTTTT+TGG | + | chr8.4:1036046-1036065 | None:intergenic | 20.0% |
! | TTAATGCCTAATACTTTGAT+GGG | + | chr8.4:1036073-1036092 | None:intergenic | 25.0% |
! | TTTAATGCCTAATACTTTGA+TGG | + | chr8.4:1036074-1036093 | None:intergenic | 25.0% |
!!! | GAATTCTCATTTTCAAGAAA+TGG | + | chr8.4:1036211-1036230 | None:intergenic | 25.0% |
!!! | TTATTGCATATTTTGAAGGT+GGG | + | chr8.4:1036108-1036127 | None:intergenic | 25.0% |
!!! | TTTATTGCATATTTTGAAGG+TGG | + | chr8.4:1036109-1036128 | None:intergenic | 25.0% |
AGAAATGGAAGTTTCATTGA+TGG | + | chr8.4:1036196-1036215 | None:intergenic | 30.0% | |
ATGATGAGAATTGCAGTAAT+TGG | + | chr8.4:1036445-1036464 | None:intergenic | 30.0% | |
TGGGTTTGATAAATACTTGA+TGG | + | chr8.4:1036054-1036073 | None:intergenic | 30.0% | |
TTCTTGAGAAGCTCAAATAT+AGG | + | chr8.4:1036421-1036440 | None:intergenic | 30.0% | |
! | AGTTTCTGTTGGAATTTTGT+TGG | - | chr8.4:1036252-1036271 | MS.gene43407:CDS | 30.0% |
! | ATCAAACCCATCAAAGTATT+AGG | - | chr8.4:1036064-1036083 | MS.gene43407:CDS | 30.0% |
! | ATTCTCATCATTGCTATTCT+TGG | - | chr8.4:1036454-1036473 | MS.gene43407:CDS | 30.0% |
AGGTGCAATATACACAATCT+TGG | - | chr8.4:1036393-1036412 | MS.gene43407:CDS | 35.0% | |
ATAATAGGAGCAGTTTCTGT+TGG | - | chr8.4:1036241-1036260 | MS.gene43407:CDS | 35.0% | |
TATGCACTAACTGTTAGTAC+AGG | - | chr8.4:1036373-1036392 | MS.gene43407:CDS | 35.0% | |
!! | ACTTCTGGAAGAAGAGTTTT+GGG | - | chr8.4:1036327-1036346 | MS.gene43407:CDS | 35.0% |
!! | TTTGTTGGTTCTGAATGGAA+TGG | - | chr8.4:1036267-1036286 | MS.gene43407:CDS | 35.0% |
!!! | GGAATTTTGTTGGTTCTGAA+TGG | - | chr8.4:1036262-1036281 | MS.gene43407:CDS | 35.0% |
AACTGTGGAAGATGCACAAA+GGG | - | chr8.4:1036168-1036187 | MS.gene43407:CDS | 40.0% | |
CAAAACTCTTCTTCCAGAAG+TGG | + | chr8.4:1036328-1036347 | None:intergenic | 40.0% | |
GAATGGAATGGATGAGCAAA+AGG | - | chr8.4:1036279-1036298 | MS.gene43407:CDS | 40.0% | |
GAGTGAAAAGAGAACAAGAG+GGG | + | chr8.4:1036024-1036043 | None:intergenic | 40.0% | |
GGAGTGAAAAGAGAACAAGA+GGG | + | chr8.4:1036025-1036044 | None:intergenic | 40.0% | |
GGTGTGTGTTTGAGGAAAAT+TGG | + | chr8.4:1036148-1036167 | None:intergenic | 40.0% | |
TGGAGTGAAAAGAGAACAAG+AGG | + | chr8.4:1036026-1036045 | None:intergenic | 40.0% | |
TTCTCAAGTCCTTACTGCTA+TGG | - | chr8.4:1036495-1036514 | MS.gene43407:CDS | 40.0% | |
! | AATGGATGAGCAAAAGGCAT+TGG | - | chr8.4:1036285-1036304 | MS.gene43407:CDS | 40.0% |
! | ATCATTGCTATTCTTGGAGG+TGG | - | chr8.4:1036460-1036479 | MS.gene43407:CDS | 40.0% |
! | CTCATCATTGCTATTCTTGG+AGG | - | chr8.4:1036457-1036476 | MS.gene43407:CDS | 40.0% |
!! | CACTTCTGGAAGAAGAGTTT+TGG | - | chr8.4:1036326-1036345 | MS.gene43407:CDS | 40.0% |
AAACGCCAACCATAGCAGTA+AGG | + | chr8.4:1036507-1036526 | None:intergenic | 45.0% | |
CAACTGTGGAAGATGCACAA+AGG | - | chr8.4:1036167-1036186 | MS.gene43407:CDS | 45.0% | |
CAAGTCCTTACTGCTATGGT+TGG | - | chr8.4:1036499-1036518 | MS.gene43407:CDS | 45.0% | |
CTTTGTGCATCTTCCACAGT+TGG | + | chr8.4:1036169-1036188 | None:intergenic | 45.0% | |
GAAAAGAGAACAAGAGGGGT+TGG | + | chr8.4:1036020-1036039 | None:intergenic | 45.0% | |
!!! | AGTTTTGGGACAACGTGAGA+AGG | - | chr8.4:1036341-1036360 | MS.gene43407:CDS | 45.0% |
!!! | GAGCAAAAGGCATTGGCTTT+TGG | - | chr8.4:1036292-1036311 | MS.gene43407:CDS | 45.0% |
AAGAGAACAAGAGGGGTTGG+AGG | + | chr8.4:1036017-1036036 | None:intergenic | 50.0% | |
CAAGAGGGGTTGGAGGAATT+TGG | + | chr8.4:1036010-1036029 | None:intergenic | 50.0% | |
CCTCAAACACACACCAACTG+TGG | - | chr8.4:1036153-1036172 | MS.gene43407:CDS | 50.0% | |
GGTTGGAGGAATTTGGAAGC+TGG | + | chr8.4:1036003-1036022 | None:intergenic | 50.0% | |
TCTTCCAGAAGTGGTCCTTC+AGG | + | chr8.4:1036319-1036338 | None:intergenic | 50.0% | |
TGGGACAACGTGAGAAGGTA+TGG | - | chr8.4:1036346-1036365 | MS.gene43407:CDS | 50.0% | |
! | CCACAGTTGGTGTGTGTTTG+AGG | + | chr8.4:1036156-1036175 | None:intergenic | 50.0% |
!!! | GCATTGGCTTTTGGACCTGA+AGG | - | chr8.4:1036301-1036320 | MS.gene43407:CDS | 50.0% |
TGGACCTGAAGGACCACTTC+TGG | - | chr8.4:1036312-1036331 | MS.gene43407:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 1035971 | 1036555 | 1035971 | ID=MS.gene43407 |
chr8.4 | mRNA | 1035971 | 1036555 | 1035971 | ID=MS.gene43407.t1;Parent=MS.gene43407 |
chr8.4 | exon | 1035971 | 1036555 | 1035971 | ID=MS.gene43407.t1.exon1;Parent=MS.gene43407.t1 |
chr8.4 | CDS | 1035971 | 1036555 | 1035971 | ID=cds.MS.gene43407.t1;Parent=MS.gene43407.t1 |
Gene Sequence |
Protein sequence |