Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062242.t1 | XP_013468768.1 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.60E-99 | 370.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062242.t1 | Q55AD9 | 60.6 | 180 | 68 | 1 | 1 | 177 | 1 | 180 | 5.8e-60 | 231.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062242.t1 | I3SWQ0 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.1e-99 | 370.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene062242 | 0.80042 | 1.45E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062242.t1 | MTR_1g076550 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 1.48e-134 | 374 |
| MS.gene062242.t1 | MTR_5g034130 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.60e-67 | 204 |
| MS.gene062242.t1 | MTR_5g034125 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.60e-67 | 204 |
| MS.gene062242.t1 | MTR_6g005820 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.77e-67 | 204 |
| MS.gene062242.t1 | MTR_1g086480 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.08e-67 | 204 |
| MS.gene062242.t1 | MTR_7g109960 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 6.07e-67 | 202 |
| MS.gene062242.t1 | MTR_5g016540 | 50.000 | 180 | 90 | 0 | 1 | 180 | 1 | 180 | 2.81e-65 | 198 |
| MS.gene062242.t1 | MTR_5g007810 | 51.149 | 174 | 85 | 0 | 1 | 174 | 1 | 174 | 6.46e-62 | 190 |
| MS.gene062242.t1 | MTR_4g077640 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.12e-60 | 187 |
| MS.gene062242.t1 | MTR_4g128910 | 48.276 | 174 | 90 | 0 | 1 | 174 | 1 | 174 | 2.12e-60 | 186 |
| MS.gene062242.t1 | MTR_5g007820 | 47.253 | 182 | 94 | 1 | 1 | 180 | 1 | 182 | 4.01e-56 | 175 |
| MS.gene062242.t1 | MTR_5g007840 | 35.681 | 213 | 92 | 2 | 1 | 180 | 1 | 201 | 5.04e-40 | 135 |
| MS.gene062242.t1 | MTR_8g077540 | 39.264 | 163 | 98 | 1 | 19 | 180 | 18 | 180 | 1.97e-39 | 132 |
| MS.gene062242.t1 | MTR_8g077540 | 39.264 | 163 | 98 | 1 | 19 | 180 | 44 | 206 | 4.75e-39 | 132 |
| MS.gene062242.t1 | MTR_2g022200 | 34.973 | 183 | 106 | 2 | 1 | 173 | 1 | 180 | 3.17e-32 | 115 |
| MS.gene062242.t1 | MTR_5g078090 | 38.028 | 142 | 87 | 1 | 12 | 152 | 14 | 155 | 3.37e-28 | 103 |
| MS.gene062242.t1 | MTR_5g015370 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 1.19e-24 | 95.1 |
| MS.gene062242.t1 | MTR_7g112090 | 35.088 | 171 | 99 | 2 | 16 | 174 | 19 | 189 | 1.68e-23 | 92.4 |
| MS.gene062242.t1 | MTR_4g026950 | 34.058 | 138 | 84 | 2 | 19 | 152 | 2 | 136 | 8.95e-23 | 89.7 |
| MS.gene062242.t1 | MTR_2g034640 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 4.41e-22 | 88.6 |
| MS.gene062242.t1 | MTR_4g121860 | 34.503 | 171 | 100 | 2 | 16 | 174 | 19 | 189 | 8.71e-22 | 87.8 |
| MS.gene062242.t1 | MTR_8g077540 | 39.583 | 96 | 58 | 0 | 19 | 114 | 18 | 113 | 5.06e-20 | 81.6 |
| MS.gene062242.t1 | MTR_1g068730 | 29.139 | 151 | 94 | 5 | 19 | 164 | 17 | 159 | 1.92e-11 | 60.1 |
| MS.gene062242.t1 | MTR_1g076590 | 67.500 | 40 | 13 | 0 | 122 | 161 | 8 | 47 | 2.44e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062242.t1 | AT3G22950 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.04e-121 | 341 |
| MS.gene062242.t1 | AT3G22950 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.04e-121 | 341 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G23490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene062242.t1 | AT1G10630 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.60e-67 | 203 |
| MS.gene062242.t1 | AT1G10630 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.60e-67 | 203 |
| MS.gene062242.t1 | AT5G14670 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.53e-67 | 203 |
| MS.gene062242.t1 | AT5G14670 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.53e-67 | 203 |
| MS.gene062242.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene062242.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene062242.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene062242.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene062242.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene062242.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene062242.t1 | AT5G14670 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 2.00e-66 | 201 |
| MS.gene062242.t1 | AT2G24765 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 1.97e-60 | 186 |
| MS.gene062242.t1 | AT5G17060 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.20e-60 | 185 |
| MS.gene062242.t1 | AT5G17060 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.20e-60 | 185 |
| MS.gene062242.t1 | AT2G15310 | 48.066 | 181 | 94 | 0 | 1 | 181 | 1 | 181 | 1.41e-59 | 184 |
| MS.gene062242.t1 | AT3G03120 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 1.99e-59 | 184 |
| MS.gene062242.t1 | AT2G24765 | 52.344 | 128 | 61 | 0 | 1 | 128 | 1 | 128 | 1.44e-44 | 144 |
| MS.gene062242.t1 | AT3G03120 | 50.000 | 130 | 65 | 0 | 1 | 130 | 1 | 130 | 2.50e-40 | 133 |
| MS.gene062242.t1 | AT2G18390 | 39.877 | 163 | 97 | 1 | 19 | 180 | 18 | 180 | 3.81e-40 | 134 |
| MS.gene062242.t1 | AT5G52210 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 1.99e-34 | 120 |
| MS.gene062242.t1 | AT5G52210 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 1.99e-34 | 120 |
| MS.gene062242.t1 | AT1G02430 | 36.216 | 185 | 104 | 5 | 1 | 173 | 1 | 183 | 4.28e-34 | 119 |
| MS.gene062242.t1 | AT1G02440 | 34.054 | 185 | 108 | 5 | 1 | 173 | 1 | 183 | 3.55e-31 | 112 |
| MS.gene062242.t1 | AT5G37680 | 36.620 | 142 | 89 | 1 | 12 | 152 | 14 | 155 | 4.96e-27 | 101 |
| MS.gene062242.t1 | AT1G02430 | 34.568 | 162 | 96 | 4 | 1 | 154 | 1 | 160 | 3.74e-26 | 98.2 |
| MS.gene062242.t1 | AT3G49870 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 2.56e-24 | 94.4 |
| MS.gene062242.t1 | AT5G67560 | 35.135 | 148 | 83 | 2 | 12 | 152 | 14 | 155 | 1.30e-23 | 92.4 |
| MS.gene062242.t1 | AT3G49860 | 34.043 | 141 | 92 | 1 | 13 | 152 | 7 | 147 | 1.48e-23 | 92.0 |
| MS.gene062242.t1 | AT3G62560 | 33.918 | 171 | 101 | 1 | 16 | 174 | 19 | 189 | 1.01e-22 | 90.1 |
| MS.gene062242.t1 | AT3G49870 | 35.461 | 141 | 78 | 2 | 19 | 152 | 2 | 136 | 1.84e-22 | 89.0 |
| MS.gene062242.t1 | AT5G37680 | 34.646 | 127 | 80 | 1 | 47 | 170 | 3 | 129 | 2.48e-22 | 87.8 |
| MS.gene062242.t1 | AT4G02080 | 33.333 | 171 | 102 | 1 | 16 | 174 | 19 | 189 | 4.43e-22 | 88.6 |
| MS.gene062242.t1 | AT1G56330 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 2.35e-21 | 86.7 |
| MS.gene062242.t1 | AT1G09180 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 5.40e-20 | 83.2 |
| MS.gene062242.t1 | AT1G02440 | 27.742 | 155 | 76 | 4 | 1 | 154 | 1 | 120 | 1.24e-14 | 67.4 |
Find 41 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTTCAGGTCTGGGATCT+TGG | 0.315908 | 1.1:+57425009 | MS.gene062242:intron |
| GATGGTCTTGGATGGATTGC+CGG | 0.370902 | 1.1:+57425327 | MS.gene062242:CDS |
| GAGTATAAGATTGTTGTTGT+TGG | 0.394215 | 1.1:+57420802 | MS.gene062242:CDS |
| ACTCTTTATAAATTGCATCT+TGG | 0.394363 | 1.1:+57420850 | MS.gene062242:CDS |
| TGGATTGCCGGGCGAGTAAC+CGG | 0.406341 | 1.1:+57425339 | MS.gene062242:CDS |
| TGCTTTGCCGGTTACTCGCC+CGG | 0.406522 | 1.1:-57425346 | None:intergenic |
| ACAATCTTATACTCTTTAGC+AGG | 0.426577 | 1.1:-57420793 | None:intergenic |
| GACGGCCTTTATGATGGTCT+TGG | 0.432233 | 1.1:+57425315 | MS.gene062242:CDS |
| CAAGCTTGCAGCGCCCTCTC+AGG | 0.432795 | 1.1:+57425291 | MS.gene062242:CDS |
| AAACCCACATCATGCTTTGC+CGG | 0.443216 | 1.1:-57425358 | None:intergenic |
| GGGCAATGATGTCTAGATTC+TGG | 0.443324 | 1.1:+57420758 | MS.gene062242:CDS |
| TAAGATTGTTGTTGTTGGAT+TGG | 0.448953 | 1.1:+57420807 | MS.gene062242:CDS |
| ATCCTTCATTAAAGAGATCC+TGG | 0.463726 | 1.1:-57425118 | None:intergenic |
| TCCATCCAAGACCATCATAA+AGG | 0.464813 | 1.1:-57425320 | None:intergenic |
| TGCTAATAAACAAGATATCA+AGG | 0.484675 | 1.1:+57425197 | MS.gene062242:CDS |
| GCCTTTATGATGGTCTTGGA+TGG | 0.493098 | 1.1:+57425319 | MS.gene062242:CDS |
| AATATGTTGCCCATGATGTC+CGG | 0.496677 | 1.1:-57425047 | None:intergenic |
| AAGAAAGACTCCGGACATCA+TGG | 0.503977 | 1.1:+57425037 | MS.gene062242:CDS |
| ACAGCATCAAGGATCATGAT+TGG | 0.511844 | 1.1:+57425262 | MS.gene062242:CDS |
| TTTCAGGTCTGGGATCTTGG+CGG | 0.512294 | 1.1:+57425012 | MS.gene062242:intron |
| ATGGTCTTGGATGGATTGCC+GGG | 0.515323 | 1.1:+57425328 | MS.gene062242:CDS |
| AGAGCATCAGTGATTTCAGC+AGG | 0.529085 | 1.1:-57425231 | None:intergenic |
| TCAGGAGACGGCCTTTATGA+TGG | 0.533539 | 1.1:+57425309 | MS.gene062242:CDS |
| TGCAGCGCCCTCTCAGGAGA+CGG | 0.539815 | 1.1:+57425297 | MS.gene062242:CDS |
| TTATAAATTGCATCTTGGTG+AGG | 0.541529 | 1.1:+57420855 | MS.gene062242:CDS |
| AGCCAGGATCTCTTTAATGA+AGG | 0.547926 | 1.1:+57425116 | MS.gene062242:CDS |
| TCGACGTTGCTACCAACAGT+AGG | 0.548630 | 1.1:-57420892 | None:intergenic |
| TTGACAGCAGTGATAGAGCC+AGG | 0.555022 | 1.1:+57425100 | MS.gene062242:CDS |
| CATAAAGGCCGTCTCCTGAG+AGG | 0.561891 | 1.1:-57425305 | None:intergenic |
| CTTGTTTATTAGCAAAGACA+AGG | 0.566607 | 1.1:-57425188 | None:intergenic |
| CAATTACAGCATGAGTTCCT+CGG | 0.575990 | 1.1:-57425071 | None:intergenic |
| TCTGTCACTTCACAGCATCA+AGG | 0.579384 | 1.1:+57425251 | MS.gene062242:CDS |
| AAGATGCAATTTATAAAGAG+TGG | 0.580200 | 1.1:-57420848 | None:intergenic |
| AGAAAGACTCCGGACATCAT+GGG | 0.590125 | 1.1:+57425038 | MS.gene062242:CDS |
| ATAAAGGCCGTCTCCTGAGA+GGG | 0.592089 | 1.1:-57425304 | None:intergenic |
| CGACGTTGCTACCAACAGTA+GGG | 0.595721 | 1.1:-57420891 | None:intergenic |
| GTTACTACTAACCCTACTGT+TGG | 0.624128 | 1.1:+57420880 | MS.gene062242:CDS |
| TTGGCGGACAAGAAAGACTC+CGG | 0.636413 | 1.1:+57425028 | MS.gene062242:CDS |
| CAATCTTATACTCTTTAGCA+GGG | 0.643634 | 1.1:-57420792 | None:intergenic |
| GTTGTTGGATTGGATAACGC+TGG | 0.661294 | 1.1:+57420817 | MS.gene062242:CDS |
| TCATGGGCAACATATTACCG+AGG | 0.738917 | 1.1:+57425054 | MS.gene062242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATTATTCCTTTATATT+TGG | + | chr1.1:57421216-57421235 | MS.gene062242:intron | 15.0% |
| !! | AAATTGTACTTAGAATTTAT+AGG | - | chr1.1:57422379-57422398 | None:intergenic | 15.0% |
| !! | AATTTACTATAGTAGTAAAA+TGG | - | chr1.1:57423647-57423666 | None:intergenic | 15.0% |
| !! | TATTAAACTAGAAAAAACTT+GGG | - | chr1.1:57424866-57424885 | None:intergenic | 15.0% |
| !!! | ATGTGTTTTTAAAATACATT+TGG | + | chr1.1:57424923-57424942 | MS.gene062242:intron | 15.0% |
| !! | AAAAATCATAAAACAAACTC+TGG | + | chr1.1:57422854-57422873 | MS.gene062242:intron | 20.0% |
| !! | AAGAGAATAGAAGATTAAAT+GGG | + | chr1.1:57422271-57422290 | MS.gene062242:intron | 20.0% |
| !! | AATGATTCAACTCAATTAAT+TGG | - | chr1.1:57424201-57424220 | None:intergenic | 20.0% |
| !! | ACATAAGTTCAAAGAAAAAT+TGG | + | chr1.1:57421153-57421172 | MS.gene062242:intron | 20.0% |
| !! | ACTAAAGAAATTAAGATCAA+GGG | + | chr1.1:57424169-57424188 | MS.gene062242:intron | 20.0% |
| !! | AGAAATTAATGCTTGAAAAT+CGG | - | chr1.1:57424541-57424560 | None:intergenic | 20.0% |
| !! | ATAGTAAAATGATGATAAAC+TGG | - | chr1.1:57420962-57420981 | None:intergenic | 20.0% |
| !! | ATGATTCAACTCAATTAATT+GGG | - | chr1.1:57424200-57424219 | None:intergenic | 20.0% |
| !! | GTATTAAACTAGAAAAAACT+TGG | - | chr1.1:57424867-57424886 | None:intergenic | 20.0% |
| !! | GTTATTCATGATTCATAATA+TGG | + | chr1.1:57423552-57423571 | MS.gene062242:intron | 20.0% |
| !! | TAAGAGAATAGAAGATTAAA+TGG | + | chr1.1:57422270-57422289 | MS.gene062242:intron | 20.0% |
| !! | TACAAAATTAAAGATACTGT+GGG | - | chr1.1:57421924-57421943 | None:intergenic | 20.0% |
| !! | TACTAAAGAAATTAAGATCA+AGG | + | chr1.1:57424168-57424187 | MS.gene062242:intron | 20.0% |
| !! | TATAGGATAAATAGTGTTAT+AGG | + | chr1.1:57421276-57421295 | MS.gene062242:intron | 20.0% |
| !!! | GTACCATTTAAATTTTCTTA+GGG | + | chr1.1:57424667-57424686 | MS.gene062242:intron | 20.0% |
| !!! | TATGTCATGATTTTAGTATT+AGG | + | chr1.1:57423381-57423400 | MS.gene062242:intron | 20.0% |
| !!! | TTAATTATGTTTTCCAAAAC+TGG | - | chr1.1:57423819-57423838 | None:intergenic | 20.0% |
| !!! | TTTTGTTAGGAAAAAAAATG+TGG | - | chr1.1:57423860-57423879 | None:intergenic | 20.0% |
| ! | AAAATGATGATAAACTGGTA+AGG | - | chr1.1:57420957-57420976 | None:intergenic | 25.0% |
| ! | AAAGAAAGACAACTTTAGAT+TGG | - | chr1.1:57421776-57421795 | None:intergenic | 25.0% |
| ! | AAATGATGATAAACTGGTAA+GGG | - | chr1.1:57420956-57420975 | None:intergenic | 25.0% |
| ! | AAATTGATTGCTAGAATAGT+TGG | + | chr1.1:57421737-57421756 | MS.gene062242:intron | 25.0% |
| ! | AAGATGCAATTTATAAAGAG+TGG | - | chr1.1:57420851-57420870 | None:intergenic | 25.0% |
| ! | AATATGCAACATTATAAGTG+TGG | + | chr1.1:57423155-57423174 | MS.gene062242:intron | 25.0% |
| ! | ACTCTTTATAAATTGCATCT+TGG | + | chr1.1:57420850-57420869 | MS.gene062242:CDS | 25.0% |
| ! | ATAAGACTAAGAGAAAGTAA+AGG | - | chr1.1:57422816-57422835 | None:intergenic | 25.0% |
| ! | CAAATATTAGCGTTCATATT+TGG | + | chr1.1:57421098-57421117 | MS.gene062242:intron | 25.0% |
| ! | CTACAAAATTAAAGATACTG+TGG | - | chr1.1:57421925-57421944 | None:intergenic | 25.0% |
| ! | TAAGACTAAGAGAAAGTAAA+GGG | - | chr1.1:57422815-57422834 | None:intergenic | 25.0% |
| ! | TAGCCCTAAGAAAATTTAAA+TGG | - | chr1.1:57424673-57424692 | None:intergenic | 25.0% |
| ! | TAGCGTAGAATAGATTAATT+GGG | - | chr1.1:57422480-57422499 | None:intergenic | 25.0% |
| ! | TCTTGAGCAATTATGATAAT+TGG | + | chr1.1:57422235-57422254 | MS.gene062242:intron | 25.0% |
| ! | TGACAAATATAATCACATTG+TGG | - | chr1.1:57421611-57421630 | None:intergenic | 25.0% |
| ! | TGATTCAACTCAATTAATTG+GGG | - | chr1.1:57424199-57424218 | None:intergenic | 25.0% |
| ! | TGCTAATAAACAAGATATCA+AGG | + | chr1.1:57425197-57425216 | MS.gene062242:CDS | 25.0% |
| ! | TTAAAGTGAGTAGAATTTGT+TGG | + | chr1.1:57424239-57424258 | MS.gene062242:intron | 25.0% |
| ! | TTACTACATCTGAACTTATT+TGG | - | chr1.1:57422993-57423012 | None:intergenic | 25.0% |
| ! | TTCATAACAATGATGACAAA+GGG | + | chr1.1:57423284-57423303 | MS.gene062242:intron | 25.0% |
| ! | TTGAATTTGTCATTCATTTC+AGG | + | chr1.1:57424996-57425015 | MS.gene062242:intron | 25.0% |
| ! | TTTAAAAACACATGCATACA+TGG | - | chr1.1:57424916-57424935 | None:intergenic | 25.0% |
| ! | TTTACATATTGCATCCAATA+CGG | - | chr1.1:57422890-57422909 | None:intergenic | 25.0% |
| !! | ATCACTGTTAAATTTTGCTA+CGG | + | chr1.1:57424116-57424135 | MS.gene062242:intron | 25.0% |
| !! | GAAATATGCACTTGATATTT+TGG | - | chr1.1:57423453-57423472 | None:intergenic | 25.0% |
| !! | GGTACCATTTAAATTTTCTT+AGG | + | chr1.1:57424666-57424685 | MS.gene062242:intron | 25.0% |
| !! | TGATGGATATACATATCATA+CGG | - | chr1.1:57422344-57422363 | None:intergenic | 25.0% |
| !! | TTGTTGATCAAAGTTTTCAT+TGG | + | chr1.1:57421042-57421061 | MS.gene062242:intron | 25.0% |
| !!! | AAACTTGGGTTGAAAAAAAA+TGG | - | chr1.1:57424852-57424871 | None:intergenic | 25.0% |
| !!! | TAATTGAGTTGAATCATTGT+TGG | + | chr1.1:57424203-57424222 | MS.gene062242:intron | 25.0% |
| !!! | TTTTTAAAATACATTTGGCG+CGG | + | chr1.1:57424928-57424947 | MS.gene062242:intron | 25.0% |
| AAAGTAAAACCAACAAACCA+TGG | - | chr1.1:57421356-57421375 | None:intergenic | 30.0% | |
| AAGACTAAGAGAAAGTAAAG+GGG | - | chr1.1:57422814-57422833 | None:intergenic | 30.0% | |
| AATAATGACCACCAAATGTT+TGG | - | chr1.1:57424374-57424393 | None:intergenic | 30.0% | |
| AATCAAAGATGGTTTCTTGA+TGG | + | chr1.1:57422160-57422179 | MS.gene062242:intron | 30.0% | |
| ACAATCTTATACTCTTTAGC+AGG | - | chr1.1:57420796-57420815 | None:intergenic | 30.0% | |
| ACCACAACAACCAAATATAA+AGG | - | chr1.1:57421229-57421248 | None:intergenic | 30.0% | |
| ACCTTATTGATAGAGGTTAA+GGG | + | chr1.1:57421815-57421834 | MS.gene062242:intron | 30.0% | |
| AGGATAAATAGTGTTATAGG+TGG | + | chr1.1:57421279-57421298 | MS.gene062242:intron | 30.0% | |
| ATAATGACCACCAAATGTTT+GGG | - | chr1.1:57424373-57424392 | None:intergenic | 30.0% | |
| ATACTCAATTCTCTTTGTGA+TGG | - | chr1.1:57423260-57423279 | None:intergenic | 30.0% | |
| ATATACATATCATACGGCAA+GGG | - | chr1.1:57422338-57422357 | None:intergenic | 30.0% | |
| ATATGTAAATGTAAGGCTAC+CGG | + | chr1.1:57422901-57422920 | MS.gene062242:intron | 30.0% | |
| ATTAGCAATGTTCAGATTCT+AGG | + | chr1.1:57423664-57423683 | MS.gene062242:intron | 30.0% | |
| ATTGATCTGAACCAAAAACA+GGG | + | chr1.1:57422769-57422788 | MS.gene062242:intron | 30.0% | |
| CAATCTTATACTCTTTAGCA+GGG | - | chr1.1:57420795-57420814 | None:intergenic | 30.0% | |
| CACAAAGAGAATTGAGTATT+TGG | + | chr1.1:57423261-57423280 | MS.gene062242:intron | 30.0% | |
| CAGTCTGATTATGAAAACAT+TGG | - | chr1.1:57423722-57423741 | None:intergenic | 30.0% | |
| CTAAAGTTGTCTTTCTTTGT+GGG | + | chr1.1:57421778-57421797 | MS.gene062242:intron | 30.0% | |
| CTTGTTTATTAGCAAAGACA+AGG | - | chr1.1:57425191-57425210 | None:intergenic | 30.0% | |
| GATTCAACTCAATTAATTGG+GGG | - | chr1.1:57424198-57424217 | None:intergenic | 30.0% | |
| GATTTATACTGTAAGCTCAT+TGG | - | chr1.1:57423420-57423439 | None:intergenic | 30.0% | |
| GGATGCAATATGTAAATGTA+AGG | + | chr1.1:57422894-57422913 | MS.gene062242:intron | 30.0% | |
| GGCAATCTAAATATGATTCA+GGG | - | chr1.1:57423626-57423645 | None:intergenic | 30.0% | |
| GTACAAATATAAGATACCCT+CGG | + | chr1.1:57422591-57422610 | MS.gene062242:intron | 30.0% | |
| GTAGCGTAGAATAGATTAAT+TGG | - | chr1.1:57422481-57422500 | None:intergenic | 30.0% | |
| GTTCATAACAATGATGACAA+AGG | + | chr1.1:57423283-57423302 | MS.gene062242:intron | 30.0% | |
| TACAAATATAAGATACCCTC+GGG | + | chr1.1:57422592-57422611 | MS.gene062242:intron | 30.0% | |
| TAGATGTAAGTCCTTAAAGA+CGG | - | chr1.1:57421557-57421576 | None:intergenic | 30.0% | |
| TATTGATCTGAACCAAAAAC+AGG | + | chr1.1:57422768-57422787 | MS.gene062242:intron | 30.0% | |
| TCCTTTATATTTGGTTGTTG+TGG | + | chr1.1:57421225-57421244 | MS.gene062242:intron | 30.0% | |
| TGGCAATCTAAATATGATTC+AGG | - | chr1.1:57423627-57423646 | None:intergenic | 30.0% | |
| TTAATCTATTCTACGCTACT+TGG | + | chr1.1:57422482-57422501 | MS.gene062242:intron | 30.0% | |
| TTATAAATTGCATCTTGGTG+AGG | + | chr1.1:57420855-57420874 | MS.gene062242:CDS | 30.0% | |
| TTTAAGGACTTACATCTAGA+GGG | + | chr1.1:57421559-57421578 | MS.gene062242:intron | 30.0% | |
| ! | ATAGGCTTCTATATTTCTGA+TGG | - | chr1.1:57422361-57422380 | None:intergenic | 30.0% |
| ! | ATTTGGTGGTCATTATTTAG+TGG | + | chr1.1:57424377-57424396 | MS.gene062242:intron | 30.0% |
| ! | ATTTGTTGGATAGCATTGTT+GGG | + | chr1.1:57424253-57424272 | MS.gene062242:intron | 30.0% |
| ! | GAGTATAAGATTGTTGTTGT+TGG | + | chr1.1:57420802-57420821 | MS.gene062242:CDS | 30.0% |
| ! | GATCTTTTATTGCGCAATTT+AGG | + | chr1.1:57423493-57423512 | MS.gene062242:intron | 30.0% |
| ! | TAAGATTGTTGTTGTTGGAT+TGG | + | chr1.1:57420807-57420826 | MS.gene062242:CDS | 30.0% |
| ! | TAATGAAGGATGAACTTTTC+AGG | + | chr1.1:57425130-57425149 | MS.gene062242:CDS | 30.0% |
| ! | TATCAATAAGGTGTTCTCAA+TGG | - | chr1.1:57421807-57421826 | None:intergenic | 30.0% |
| ! | TCTAAAGTTGTCTTTCTTTG+TGG | + | chr1.1:57421777-57421796 | MS.gene062242:intron | 30.0% |
| ! | TTTGGTGGTCATTATTTAGT+GGG | + | chr1.1:57424378-57424397 | MS.gene062242:intron | 30.0% |
| ! | TTTTATGATTTTTCCTCGCA+AGG | - | chr1.1:57422847-57422866 | None:intergenic | 30.0% |
| ! | TTTTGACCATTGAACTGTTT+TGG | + | chr1.1:57421658-57421677 | MS.gene062242:intron | 30.0% |
| !! | AATTTGTTGGATAGCATTGT+TGG | + | chr1.1:57424252-57424271 | MS.gene062242:intron | 30.0% |
| !! | AGCAAATTTGAGTTTGTTGA+TGG | - | chr1.1:57422188-57422207 | None:intergenic | 30.0% |
| !! | ATATGCACTTGATATTTTGG+AGG | - | chr1.1:57423450-57423469 | None:intergenic | 30.0% |
| !! | GACACTTTCTTTTTGAAGAA+CGG | - | chr1.1:57421589-57421608 | None:intergenic | 30.0% |
| !!! | TTAGGGGATATTTTGTTTTG+CGG | + | chr1.1:57424282-57424301 | MS.gene062242:intron | 30.0% |
| !!! | TTGGTTTTACTTTGTTGTCA+GGG | + | chr1.1:57421363-57421382 | MS.gene062242:intron | 30.0% |
| !!! | TTTGAGTCTTGTTTTGAAGA+AGG | + | chr1.1:57424726-57424745 | MS.gene062242:intron | 30.0% |
| AAAATGCACATCTCCATATC+AGG | - | chr1.1:57421873-57421892 | None:intergenic | 35.0% | |
| AAATGCACATCTCCATATCA+GGG | - | chr1.1:57421872-57421891 | None:intergenic | 35.0% | |
| AACTTCGTATAGAAGTTGTG+TGG | + | chr1.1:57421494-57421513 | MS.gene062242:intron | 35.0% | |
| AGACTAAGAGAAAGTAAAGG+GGG | - | chr1.1:57422813-57422832 | None:intergenic | 35.0% | |
| AGGAAGAAAACAATTGAGAG+AGG | - | chr1.1:57423910-57423929 | None:intergenic | 35.0% | |
| AGTTGAATCATTGTTGGTGT+TGG | + | chr1.1:57424209-57424228 | MS.gene062242:intron | 35.0% | |
| ATACTATCTTTATCCCAACG+TGG | - | chr1.1:57422751-57422770 | None:intergenic | 35.0% | |
| ATCAGAATGGTTACTTCTGT+GGG | - | chr1.1:57423476-57423495 | None:intergenic | 35.0% | |
| ATCCTTCATTAAAGAGATCC+TGG | - | chr1.1:57425121-57425140 | None:intergenic | 35.0% | |
| ATGATTAGAATCATGAGCAG+TGG | + | chr1.1:57421413-57421432 | MS.gene062242:intron | 35.0% | |
| ATTCTCTTTGTGATGGTCAT+TGG | - | chr1.1:57423253-57423272 | None:intergenic | 35.0% | |
| ATTGCTAGATCTAGTGAAAC+CGG | - | chr1.1:57423026-57423045 | None:intergenic | 35.0% | |
| CAAAGATAAGGAGGAAACTA+TGG | + | chr1.1:57421305-57421324 | MS.gene062242:intron | 35.0% | |
| CAAGAAAATATTCTCCAAGG+TGG | - | chr1.1:57422007-57422026 | None:intergenic | 35.0% | |
| CAATCTCTTGTGACATTGAA+TGG | + | chr1.1:57422065-57422084 | MS.gene062242:intron | 35.0% | |
| CACCTTATTGATAGAGGTTA+AGG | + | chr1.1:57421814-57421833 | MS.gene062242:intron | 35.0% | |
| CATCTGGATCGTGATTTAAT+GGG | - | chr1.1:57424496-57424515 | None:intergenic | 35.0% | |
| CCATGAGAAGATTATCTATG+AGG | - | chr1.1:57422690-57422709 | None:intergenic | 35.0% | |
| CCTCAAGAAAATATTCTCCA+AGG | - | chr1.1:57422010-57422029 | None:intergenic | 35.0% | |
| CCTCATAGATAATCTTCTCA+TGG | + | chr1.1:57422687-57422706 | MS.gene062242:intron | 35.0% | |
| CCTTATTGATAGAGGTTAAG+GGG | + | chr1.1:57421816-57421835 | MS.gene062242:intron | 35.0% | |
| CGTAGAATAGATTAATTGGG+TGG | - | chr1.1:57422477-57422496 | None:intergenic | 35.0% | |
| CTAGATGTCCTAATAATCGA+TGG | - | chr1.1:57423114-57423133 | None:intergenic | 35.0% | |
| GAACGCTAATATTTGCTTGA+GGG | - | chr1.1:57421093-57421112 | None:intergenic | 35.0% | |
| GAATCCTGAGGTATATCAAA+GGG | - | chr1.1:57423217-57423236 | None:intergenic | 35.0% | |
| GATATACATATCATACGGCA+AGG | - | chr1.1:57422339-57422358 | None:intergenic | 35.0% | |
| GCTGGTTATTATGTTCTTGT+CGG | - | chr1.1:57423088-57423107 | None:intergenic | 35.0% | |
| GGAAGAAAACAATTGAGAGA+GGG | - | chr1.1:57423909-57423928 | None:intergenic | 35.0% | |
| GTATATCAAAGGGTCTCAAA+GGG | - | chr1.1:57423207-57423226 | None:intergenic | 35.0% | |
| GTCATACACTTGTCTTATCT+TGG | - | chr1.1:57422102-57422121 | None:intergenic | 35.0% | |
| TACTTCTCTTGTAAGAAGCT+TGG | + | chr1.1:57424560-57424579 | MS.gene062242:intron | 35.0% | |
| TATAGGTGGTGACAAAGATA+AGG | + | chr1.1:57421293-57421312 | MS.gene062242:intron | 35.0% | |
| TATTTATACAGAGCTGAAGC+TGG | - | chr1.1:57423598-57423617 | None:intergenic | 35.0% | |
| TCATCTCAAAAGAGACATGT+TGG | + | chr1.1:57422924-57422943 | MS.gene062242:intron | 35.0% | |
| TGAACGCTAATATTTGCTTG+AGG | - | chr1.1:57421094-57421113 | None:intergenic | 35.0% | |
| TGAATCCTGAGGTATATCAA+AGG | - | chr1.1:57423218-57423237 | None:intergenic | 35.0% | |
| TGAGAACACCTTATTGATAG+AGG | + | chr1.1:57421808-57421827 | MS.gene062242:intron | 35.0% | |
| TGCGCAATAAAAGATCAGAA+TGG | - | chr1.1:57423489-57423508 | None:intergenic | 35.0% | |
| TTAATGCTTGAAAATCGGAC+CGG | - | chr1.1:57424536-57424555 | None:intergenic | 35.0% | |
| TTGTGCACAATAGTAAAGCT+AGG | - | chr1.1:57424961-57424980 | None:intergenic | 35.0% | |
| ! | ACTCAAATTTGCTCCTCATT+TGG | + | chr1.1:57422195-57422214 | MS.gene062242:intron | 35.0% |
| ! | ATGTTTTCACCAAGTCTCTA+AGG | - | chr1.1:57422618-57422637 | None:intergenic | 35.0% |
| ! | ATGTTTTCCAAAACTGGTAC+AGG | - | chr1.1:57423813-57423832 | None:intergenic | 35.0% |
| ! | CATCGATTATTAGGACATCT+AGG | + | chr1.1:57423112-57423131 | MS.gene062242:intron | 35.0% |
| ! | CCTTGGAGAATATTTTCTTG+AGG | + | chr1.1:57422007-57422026 | MS.gene062242:intron | 35.0% |
| ! | CTACAAAAACATTCGATTCG+AGG | + | chr1.1:57420924-57420943 | MS.gene062242:CDS | 35.0% |
| ! | CTTTAAGGACTTACATCTAG+AGG | + | chr1.1:57421558-57421577 | MS.gene062242:intron | 35.0% |
| ! | GGGTGTTTCTAAATGAACAA+GGG | + | chr1.1:57424645-57424664 | MS.gene062242:intron | 35.0% |
| ! | GTCTCTGACGTAATTTTGTT+AGG | - | chr1.1:57423873-57423892 | None:intergenic | 35.0% |
| ! | GTTTTCATAATCAGACTGAC+TGG | + | chr1.1:57423724-57423743 | MS.gene062242:intron | 35.0% |
| ! | TGATATGGAGATGTGCATTT+TGG | + | chr1.1:57421872-57421891 | MS.gene062242:intron | 35.0% |
| ! | TGGGTGTTTCTAAATGAACA+AGG | + | chr1.1:57424644-57424663 | MS.gene062242:intron | 35.0% |
| ! | TTGGTGGTCATTATTTAGTG+GGG | + | chr1.1:57424379-57424398 | MS.gene062242:intron | 35.0% |
| ! | TTGTCATTCATTTCAGGTCT+GGG | + | chr1.1:57425002-57425021 | MS.gene062242:intron | 35.0% |
| ! | TTTGTCATTCATTTCAGGTC+TGG | + | chr1.1:57425001-57425020 | MS.gene062242:intron | 35.0% |
| !! | AGTGGATTAGCAATCAAAGA+TGG | + | chr1.1:57422149-57422168 | MS.gene062242:intron | 35.0% |
| !! | ATGTGTACATTGCTTTTGAG+AGG | + | chr1.1:57421633-57421652 | MS.gene062242:intron | 35.0% |
| !! | TAAGCTCATTGGTTCACATA+CGG | - | chr1.1:57423409-57423428 | None:intergenic | 35.0% |
| !! | TCGTGATTTAATGGGTTCAA+CGG | - | chr1.1:57424488-57424507 | None:intergenic | 35.0% |
| !! | TGACTTAGTTTGTTCAACCT+GGG | - | chr1.1:57424094-57424113 | None:intergenic | 35.0% |
| !! | TTGTGGTTTGTTAACCATCA+GGG | + | chr1.1:57421242-57421261 | MS.gene062242:intron | 35.0% |
| !!! | ACATGCACTGTGTTTTTTTG+GGG | - | chr1.1:57424783-57424802 | None:intergenic | 35.0% |
| !!! | CACATGCACTGTGTTTTTTT+GGG | - | chr1.1:57424784-57424803 | None:intergenic | 35.0% |
| !!! | GTTGGTTTTACTTTGTTGTC+AGG | + | chr1.1:57421362-57421381 | MS.gene062242:intron | 35.0% |
| AACAATTGAGAGAGGGACAT+AGG | - | chr1.1:57423902-57423921 | None:intergenic | 40.0% | |
| AAGAACCAAGATTTGTGGCA+TGG | - | chr1.1:57424015-57424034 | None:intergenic | 40.0% | |
| AAGATCGAATGCCAAAATCG+TGG | - | chr1.1:57424617-57424636 | None:intergenic | 40.0% | |
| AAGTGTATGACAGTGTTTCC+AGG | + | chr1.1:57422111-57422130 | MS.gene062242:intron | 40.0% | |
| AATATGTTGCCCATGATGTC+CGG | - | chr1.1:57425050-57425069 | None:intergenic | 40.0% | |
| AATCATGAGCAGTGGCTATA+GGG | + | chr1.1:57421421-57421440 | MS.gene062242:intron | 40.0% | |
| AATGTCACACTCATCAAGCT+TGG | + | chr1.1:57422569-57422588 | MS.gene062242:intron | 40.0% | |
| ACAATTGAGAGAGGGACATA+GGG | - | chr1.1:57423901-57423920 | None:intergenic | 40.0% | |
| ACACTTGAGTGTAAGATCCA+TGG | + | chr1.1:57421336-57421355 | MS.gene062242:intron | 40.0% | |
| ACAGCATCAAGGATCATGAT+TGG | + | chr1.1:57425262-57425281 | MS.gene062242:CDS | 40.0% | |
| ACTACAGCAGCAATGAAGAT+TGG | - | chr1.1:57421520-57421539 | None:intergenic | 40.0% | |
| ACTTCTGATGCAAACGATGT+TGG | + | chr1.1:57422039-57422058 | MS.gene062242:intron | 40.0% | |
| AGCCAGGATCTCTTTAATGA+AGG | + | chr1.1:57425116-57425135 | MS.gene062242:CDS | 40.0% | |
| AGGGAGTTGGATGTAAAATG+TGG | - | chr1.1:57422319-57422338 | None:intergenic | 40.0% | |
| AGTAGATGGTGAAGATTGGT+TGG | - | chr1.1:57423346-57423365 | None:intergenic | 40.0% | |
| AGTGGAAGAACCAAGATTTG+TGG | - | chr1.1:57424020-57424039 | None:intergenic | 40.0% | |
| ATGCAATAGCTTGAATCCTG+AGG | - | chr1.1:57423229-57423248 | None:intergenic | 40.0% | |
| ATGTGCAGCCAACAAAATTG+AGG | + | chr1.1:57424799-57424818 | MS.gene062242:intron | 40.0% | |
| CAATTACAGCATGAGTTCCT+CGG | - | chr1.1:57425074-57425093 | None:intergenic | 40.0% | |
| CATCGTTTGCATCAGAAGTT+TGG | - | chr1.1:57422038-57422057 | None:intergenic | 40.0% | |
| CCAATCTTCACCATCTACTA+TGG | + | chr1.1:57423347-57423366 | MS.gene062242:intron | 40.0% | |
| CCATAGTAGATGGTGAAGAT+TGG | - | chr1.1:57423350-57423369 | None:intergenic | 40.0% | |
| CCATCTACTATGGTCTGAAA+AGG | + | chr1.1:57423357-57423376 | MS.gene062242:intron | 40.0% | |
| CCCCTTAACCTCTATCAATA+AGG | - | chr1.1:57421819-57421838 | None:intergenic | 40.0% | |
| CGGAGAGAATCTAAGTTCAT+GGG | - | chr1.1:57423068-57423087 | None:intergenic | 40.0% | |
| GATCAGAATGGTTACTTCTG+TGG | - | chr1.1:57423477-57423496 | None:intergenic | 40.0% | |
| GCATCTGGATCGTGATTTAA+TGG | - | chr1.1:57424497-57424516 | None:intergenic | 40.0% | |
| GGTAGTCCAAAACAGTTCAA+TGG | - | chr1.1:57421667-57421686 | None:intergenic | 40.0% | |
| GGTATATCAAAGGGTCTCAA+AGG | - | chr1.1:57423208-57423227 | None:intergenic | 40.0% | |
| GGTTTATGAGCCCAAACATT+TGG | + | chr1.1:57424360-57424379 | MS.gene062242:intron | 40.0% | |
| GTTACTACTAACCCTACTGT+TGG | + | chr1.1:57420880-57420899 | MS.gene062242:CDS | 40.0% | |
| GTTGATCTTGCTTGCTTCTA+GGG | + | chr1.1:57420995-57421014 | MS.gene062242:intron | 40.0% | |
| TAACCATCAGGGAGAAGAAT+CGG | + | chr1.1:57421253-57421272 | MS.gene062242:intron | 40.0% | |
| TCAGAATGGTTACTTCTGTG+GGG | - | chr1.1:57423475-57423494 | None:intergenic | 40.0% | |
| TCATTTAGAAACACCCAAGC+AGG | - | chr1.1:57424641-57424660 | None:intergenic | 40.0% | |
| TCCATCCAAGACCATCATAA+AGG | - | chr1.1:57425323-57425342 | None:intergenic | 40.0% | |
| TCGGAGAGAATCTAAGTTCA+TGG | - | chr1.1:57423069-57423088 | None:intergenic | 40.0% | |
| TGAGATATTATCAGCCACCT+TGG | + | chr1.1:57421990-57422009 | MS.gene062242:intron | 40.0% | |
| TGTCAATGGAACTCCAAATG+AGG | - | chr1.1:57422211-57422230 | None:intergenic | 40.0% | |
| TGTTGATCTTGCTTGCTTCT+AGG | + | chr1.1:57420994-57421013 | MS.gene062242:intron | 40.0% | |
| TTATGAGCCCAAACATTTGG+TGG | + | chr1.1:57424363-57424382 | MS.gene062242:intron | 40.0% | |
| TTGCTAGATCTAGTGAAACC+GGG | - | chr1.1:57423025-57423044 | None:intergenic | 40.0% | |
| TTGCTCAAGATCCATGTCAA+TGG | - | chr1.1:57422225-57422244 | None:intergenic | 40.0% | |
| TTGGATAGCATTGTTGGGAT+TGG | + | chr1.1:57424258-57424277 | MS.gene062242:intron | 40.0% | |
| TTTATCCCAACGTGGACATA+CGG | - | chr1.1:57422743-57422762 | None:intergenic | 40.0% | |
| ! | ATCGTGCTCCTCAATTTTGT+TGG | - | chr1.1:57424810-57424829 | None:intergenic | 40.0% |
| ! | ATGATGACAAAGGGTATGTC+AGG | + | chr1.1:57423293-57423312 | MS.gene062242:intron | 40.0% |
| ! | CATTTGGAGTTCCATTGACA+TGG | + | chr1.1:57422211-57422230 | MS.gene062242:intron | 40.0% |
| ! | CCTTTTCAGACCATAGTAGA+TGG | - | chr1.1:57423360-57423379 | None:intergenic | 40.0% |
| ! | CTGTTAAATTTTGCTACGGC+TGG | + | chr1.1:57424120-57424139 | MS.gene062242:intron | 40.0% |
| ! | GTGTAAGATCCATGGTTTGT+TGG | + | chr1.1:57421344-57421363 | MS.gene062242:intron | 40.0% |
| ! | TGGTGAGTGGTAGTGAATAA+AGG | - | chr1.1:57424597-57424616 | None:intergenic | 40.0% |
| !! | AAGCTCATTGGTTCACATAC+GGG | - | chr1.1:57423408-57423427 | None:intergenic | 40.0% |
| !! | AGCATTGTTGGGATTGGTTT+AGG | + | chr1.1:57424264-57424283 | MS.gene062242:intron | 40.0% |
| !! | CATTGTTGGGATTGGTTTAG+GGG | + | chr1.1:57424266-57424285 | MS.gene062242:intron | 40.0% |
| !! | GCATTGTTGGGATTGGTTTA+GGG | + | chr1.1:57424265-57424284 | MS.gene062242:intron | 40.0% |
| !! | GTGACTTAGTTTGTTCAACC+TGG | - | chr1.1:57424095-57424114 | None:intergenic | 40.0% |
| !! | GTTGTGGTTTGTTAACCATC+AGG | + | chr1.1:57421241-57421260 | MS.gene062242:intron | 40.0% |
| !!! | AGTCTTGTTTTGAAGAAGGC+AGG | + | chr1.1:57424730-57424749 | MS.gene062242:intron | 40.0% |
| !!! | CATGTCTCTTTTGAGATGAC+CGG | - | chr1.1:57422923-57422942 | None:intergenic | 40.0% |
| !!! | GATGAACTTTTCAGGTTGCT+GGG | + | chr1.1:57425138-57425157 | MS.gene062242:CDS | 40.0% |
| !!! | GCACATGCACTGTGTTTTTT+TGG | - | chr1.1:57424785-57424804 | None:intergenic | 40.0% |
| AAACAGGGCAGCTCAAACAA+AGG | + | chr1.1:57422784-57422803 | MS.gene062242:intron | 45.0% | |
| AAGAAAGACTCCGGACATCA+TGG | + | chr1.1:57425037-57425056 | MS.gene062242:CDS | 45.0% | |
| AATGCCAAAATCGTGGTGAG+TGG | - | chr1.1:57424610-57424629 | None:intergenic | 45.0% | |
| AGAAAGACTCCGGACATCAT+GGG | + | chr1.1:57425038-57425057 | MS.gene062242:CDS | 45.0% | |
| AGATTTGTGGCATGGAACAG+TGG | - | chr1.1:57424007-57424026 | None:intergenic | 45.0% | |
| AGGTGGTGACAAAGATAAGG+AGG | + | chr1.1:57421296-57421315 | MS.gene062242:intron | 45.0% | |
| ATATCATACGGCAAGGGAGT+TGG | - | chr1.1:57422332-57422351 | None:intergenic | 45.0% | |
| ATGTAGTAAGAGCCATAGCC+CGG | + | chr1.1:57423004-57423023 | MS.gene062242:intron | 45.0% | |
| CCTAATAATCGATGGTCAGC+TGG | - | chr1.1:57423106-57423125 | None:intergenic | 45.0% | |
| CTGGTCATTGAAGACCGTAT+TGG | + | chr1.1:57422873-57422892 | MS.gene062242:intron | 45.0% | |
| CTGTTCCATGCCACAAATCT+TGG | + | chr1.1:57424007-57424026 | MS.gene062242:intron | 45.0% | |
| CTTATCATAGTTGCCTTGCG+AGG | + | chr1.1:57422831-57422850 | MS.gene062242:intron | 45.0% | |
| CTTGTAAGAAGCTTGGCTAC+AGG | + | chr1.1:57424567-57424586 | MS.gene062242:intron | 45.0% | |
| GAATCATGAGCAGTGGCTAT+AGG | + | chr1.1:57421420-57421439 | MS.gene062242:intron | 45.0% | |
| GAGACCCTTTGATATACCTC+AGG | + | chr1.1:57423210-57423229 | MS.gene062242:intron | 45.0% | |
| GCATCATGGTGTGAAAACTG+TGG | - | chr1.1:57424064-57424083 | None:intergenic | 45.0% | |
| GGGACGAACATTGCAATTTG+TGG | - | chr1.1:57421904-57421923 | None:intergenic | 45.0% | |
| GGGCAATGATGTCTAGATTC+TGG | + | chr1.1:57420758-57420777 | MS.gene062242:CDS | 45.0% | |
| GGTATAGGTCGTTCATCTCA+TGG | - | chr1.1:57421688-57421707 | None:intergenic | 45.0% | |
| GTGTGACATTTACACCAGCT+TGG | - | chr1.1:57422559-57422578 | None:intergenic | 45.0% | |
| TATGATAGCAGCAGTCTAGC+AGG | + | chr1.1:57424339-57424358 | MS.gene062242:intron | 45.0% | |
| TCAAAGGGTCTCAAAGGGAA+AGG | - | chr1.1:57423202-57423221 | None:intergenic | 45.0% | |
| TCAGGGAGAAGAATCGGTAT+AGG | + | chr1.1:57421259-57421278 | MS.gene062242:intron | 45.0% | |
| TCATGGGCAACATATTACCG+AGG | + | chr1.1:57425054-57425073 | MS.gene062242:CDS | 45.0% | |
| TGCTGGGGTAAAAGCTAGTT+TGG | + | chr1.1:57421714-57421733 | MS.gene062242:intron | 45.0% | |
| TGCTGTAGTTGCAACCTGAT+TGG | + | chr1.1:57421531-57421550 | MS.gene062242:intron | 45.0% | |
| TGCTTCAGTGGTTTGATCTC+CGG | + | chr1.1:57424514-57424533 | MS.gene062242:intron | 45.0% | |
| TGGCTATAGGGTTTGATCGT+GGG | + | chr1.1:57421433-57421452 | MS.gene062242:intron | 45.0% | |
| TTTGTCCCAAATCCTGCTGA+TGG | - | chr1.1:57421843-57421862 | None:intergenic | 45.0% | |
| TTTGTTCAACCTGGGCAGAA+TGG | - | chr1.1:57424086-57424105 | None:intergenic | 45.0% | |
| ! | AACCTGATTGGCCGTCTTTA+AGG | + | chr1.1:57421543-57421562 | MS.gene062242:intron | 45.0% |
| ! | ACCTATACCTTGAGTTGCTG+GGG | + | chr1.1:57421699-57421718 | MS.gene062242:intron | 45.0% |
| ! | ACTACCACTCACCACGATTT+TGG | + | chr1.1:57424603-57424622 | MS.gene062242:intron | 45.0% |
| ! | ACTTTGTTGTCAGGGTGACA+TGG | + | chr1.1:57421371-57421390 | MS.gene062242:intron | 45.0% |
| ! | AGAGCATCAGTGATTTCAGC+AGG | - | chr1.1:57425234-57425253 | None:intergenic | 45.0% |
| ! | CCAGCTGACCATCGATTATT+AGG | + | chr1.1:57423103-57423122 | MS.gene062242:intron | 45.0% |
| ! | CTGCAGTTTTTCTGACTAGC+TGG | - | chr1.1:57423788-57423807 | None:intergenic | 45.0% |
| ! | GACCTATACCTTGAGTTGCT+GGG | + | chr1.1:57421698-57421717 | MS.gene062242:intron | 45.0% |
| ! | GATCAAACCACTGAAGCATC+TGG | - | chr1.1:57424512-57424531 | None:intergenic | 45.0% |
| ! | GCCTTTATGATGGTCTTGGA+TGG | + | chr1.1:57425319-57425338 | MS.gene062242:CDS | 45.0% |
| ! | GTTGTTGGATTGGATAACGC+TGG | + | chr1.1:57420817-57420836 | MS.gene062242:CDS | 45.0% |
| ! | TCATTTCAGGTCTGGGATCT+TGG | + | chr1.1:57425009-57425028 | MS.gene062242:intron | 45.0% |
| ! | TCTGTCACTTCACAGCATCA+AGG | + | chr1.1:57425251-57425270 | MS.gene062242:CDS | 45.0% |
| ! | TGCAGAACCTGTACCAGTTT+TGG | + | chr1.1:57423803-57423822 | MS.gene062242:intron | 45.0% |
| ! | TGTTTGAGCTGCCCTGTTTT+TGG | - | chr1.1:57422783-57422802 | None:intergenic | 45.0% |
| !! | ATACCGATTCTTCTCCCTGA+TGG | - | chr1.1:57421259-57421278 | None:intergenic | 45.0% |
| !!! | GGATGAACTTTTCAGGTTGC+TGG | + | chr1.1:57425137-57425156 | MS.gene062242:CDS | 45.0% |
| !!! | TTCCTTGCGCTTTTTCAGCT+TGG | - | chr1.1:57424405-57424424 | None:intergenic | 45.0% |
| AACTTGGTTCCAAGCCAGTC+AGG | + | chr1.1:57423762-57423781 | MS.gene062242:intron | 50.0% | |
| ACAGAACAGCGTAGAGGAAG+GGG | - | chr1.1:57423957-57423976 | None:intergenic | 50.0% | |
| ACCCCAGCAACTCAAGGTAT+AGG | - | chr1.1:57421703-57421722 | None:intergenic | 50.0% | |
| AGACAGAACAGCGTAGAGGA+AGG | - | chr1.1:57423959-57423978 | None:intergenic | 50.0% | |
| AGTGTGGCCTCTTCTCTCAT+AGG | + | chr1.1:57423171-57423190 | MS.gene062242:intron | 50.0% | |
| ATAAAGGCCGTCTCCTGAGA+GGG | - | chr1.1:57425307-57425326 | None:intergenic | 50.0% | |
| CGACGTTGCTACCAACAGTA+GGG | - | chr1.1:57420894-57420913 | None:intergenic | 50.0% | |
| CTCAACACTCTCATCCAAGC+TGG | + | chr1.1:57422542-57422561 | MS.gene062242:intron | 50.0% | |
| GACAAACGCGATCCCTGATA+TGG | + | chr1.1:57421857-57421876 | MS.gene062242:intron | 50.0% | |
| GACAGAACAGCGTAGAGGAA+GGG | - | chr1.1:57423958-57423977 | None:intergenic | 50.0% | |
| GACCTGACGCAACTTTGTAC+TGG | + | chr1.1:57423686-57423705 | MS.gene062242:intron | 50.0% | |
| GACGGCCTTTATGATGGTCT+TGG | + | chr1.1:57425315-57425334 | MS.gene062242:CDS | 50.0% | |
| GATCTAGTGAAACCGGGCTA+TGG | - | chr1.1:57423019-57423038 | None:intergenic | 50.0% | |
| GCATTCGATCTTGCCTGCTT+GGG | + | chr1.1:57424625-57424644 | MS.gene062242:intron | 50.0% | |
| GGATCAGCCTATGAGAGAAG+AGG | - | chr1.1:57423181-57423200 | None:intergenic | 50.0% | |
| GGATGACGATGACATGCTGA+GGG | - | chr1.1:57424043-57424062 | None:intergenic | 50.0% | |
| GGCTATAGGGTTTGATCGTG+GGG | + | chr1.1:57421434-57421453 | MS.gene062242:intron | 50.0% | |
| GTAGAACCAGGAACCGAACT+TGG | + | chr1.1:57423746-57423765 | MS.gene062242:intron | 50.0% | |
| GTAGTCCGTATGTCCACGTT+GGG | + | chr1.1:57422735-57422754 | MS.gene062242:intron | 50.0% | |
| GTCCAGTACAAAGTTGCGTC+AGG | - | chr1.1:57423691-57423710 | None:intergenic | 50.0% | |
| GTCCTTAAAGACGGCCAATC+AGG | - | chr1.1:57421548-57421567 | None:intergenic | 50.0% | |
| GTGGCTATAGGGTTTGATCG+TGG | + | chr1.1:57421432-57421451 | MS.gene062242:intron | 50.0% | |
| TCACGATCCAGATGCTTCAG+TGG | + | chr1.1:57424502-57424521 | MS.gene062242:intron | 50.0% | |
| TCAGACTGACTGGTAGAACC+AGG | + | chr1.1:57423734-57423753 | MS.gene062242:intron | 50.0% | |
| TCAGGAGACGGCCTTTATGA+TGG | + | chr1.1:57425309-57425328 | MS.gene062242:CDS | 50.0% | |
| TCGACGTTGCTACCAACAGT+AGG | - | chr1.1:57420895-57420914 | None:intergenic | 50.0% | |
| TGGATGACGATGACATGCTG+AGG | - | chr1.1:57424044-57424063 | None:intergenic | 50.0% | |
| TGTAGTCCGTATGTCCACGT+TGG | + | chr1.1:57422734-57422753 | MS.gene062242:intron | 50.0% | |
| TTGACAGCAGTGATAGAGCC+AGG | + | chr1.1:57425100-57425119 | MS.gene062242:CDS | 50.0% | |
| TTGGAACCAAGTTCGGTTCC+TGG | - | chr1.1:57423755-57423774 | None:intergenic | 50.0% | |
| ! | CGACCTATACCTTGAGTTGC+TGG | + | chr1.1:57421697-57421716 | MS.gene062242:intron | 50.0% |
| ! | GCTTTTACCCCAGCAACTCA+AGG | - | chr1.1:57421709-57421728 | None:intergenic | 50.0% |
| ! | TTGGCGGACAAGAAAGACTC+CGG | + | chr1.1:57425028-57425047 | MS.gene062242:CDS | 50.0% |
| ! | TTTCAGGTCTGGGATCTTGG+CGG | + | chr1.1:57425012-57425031 | MS.gene062242:intron | 50.0% |
| !! | ATGGTCTTGGATGGATTGCC+GGG | + | chr1.1:57425328-57425347 | MS.gene062242:CDS | 50.0% |
| !! | GACTGGCTTGGAACCAAGTT+CGG | - | chr1.1:57423762-57423781 | None:intergenic | 50.0% |
| !! | GATGGTCTTGGATGGATTGC+CGG | + | chr1.1:57425327-57425346 | MS.gene062242:CDS | 50.0% |
| !! | GGAGATGTGCATTTTGGCAG+AGG | + | chr1.1:57421878-57421897 | MS.gene062242:intron | 50.0% |
| AAGGGGAACGACAGTGAGCA+AGG | - | chr1.1:57423940-57423959 | None:intergenic | 55.0% | |
| ACAGTGAGCAAGGCAGTGTG+AGG | - | chr1.1:57423930-57423949 | None:intergenic | 55.0% | |
| ACCATGATGCCATTCTGCCC+AGG | + | chr1.1:57424074-57424093 | MS.gene062242:intron | 55.0% | |
| ACCTGGGCAGAATGGCATCA+TGG | - | chr1.1:57424078-57424097 | None:intergenic | 55.0% | |
| ACGATGACATGCTGAGGGAG+TGG | - | chr1.1:57424038-57424057 | None:intergenic | 55.0% | |
| AGGGGTCCATCAGCAGGATT+TGG | + | chr1.1:57421834-57421853 | MS.gene062242:intron | 55.0% | |
| AGGTTAAGGGGTCCATCAGC+AGG | + | chr1.1:57421828-57421847 | MS.gene062242:intron | 55.0% | |
| CAGCAGACAGAACAGCGTAG+AGG | - | chr1.1:57423963-57423982 | None:intergenic | 55.0% | |
| CATAAAGGCCGTCTCCTGAG+AGG | - | chr1.1:57425308-57425327 | None:intergenic | 55.0% | |
| GCTACGGCTGGAATGCATGT+AGG | + | chr1.1:57424132-57424151 | MS.gene062242:intron | 55.0% | |
| GGCATTCGATCTTGCCTGCT+TGG | + | chr1.1:57424624-57424643 | MS.gene062242:intron | 55.0% | |
| GGGGTCCATCAGCAGGATTT+GGG | + | chr1.1:57421835-57421854 | MS.gene062242:intron | 55.0% | |
| TGCTAATCCACTGAGTCGCG+AGG | - | chr1.1:57422141-57422160 | None:intergenic | 55.0% | |
| ! | GGCCAAGCTGAAAAAGCGCA+AGG | + | chr1.1:57424400-57424419 | MS.gene062242:intron | 55.0% |
| ! | TTCTGACTAGCTGGCCTGAC+TGG | - | chr1.1:57423779-57423798 | None:intergenic | 55.0% |
| !! | ACCAAGTCTCTAAGGCCCGA+GGG | - | chr1.1:57422610-57422629 | None:intergenic | 55.0% |
| ACCCTCGGGCCTTAGAGACT+TGG | + | chr1.1:57422606-57422625 | MS.gene062242:intron | 60.0% | |
| TGGATTGCCGGGCGAGTAAC+CGG | + | chr1.1:57425339-57425358 | MS.gene062242:CDS | 60.0% | |
| ! | ACTAGCTGGCCTGACTGGCT+TGG | - | chr1.1:57423774-57423793 | None:intergenic | 60.0% |
| ! | TGCTTTGCCGGTTACTCGCC+CGG | - | chr1.1:57425349-57425368 | None:intergenic | 60.0% |
| !! | CACCAAGTCTCTAAGGCCCG+AGG | - | chr1.1:57422611-57422630 | None:intergenic | 60.0% |
| ACTGAGTCGCGAGGCATGCC+TGG | - | chr1.1:57422132-57422151 | None:intergenic | 65.0% | |
| AGGCATGCCTCGCGACTCAG+TGG | + | chr1.1:57422131-57422150 | MS.gene062242:intron | 65.0% | |
| CAAGCTTGCAGCGCCCTCTC+AGG | + | chr1.1:57425291-57425310 | MS.gene062242:CDS | 65.0% | |
| TGCAGCGCCCTCTCAGGAGA+CGG | + | chr1.1:57425297-57425316 | MS.gene062242:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 57420754 | 57425371 | 57420754 | ID=MS.gene062242 |
| chr1.1 | mRNA | 57420754 | 57425371 | 57420754 | ID=MS.gene062242.t1;Parent=MS.gene062242 |
| chr1.1 | exon | 57420754 | 57420945 | 57420754 | ID=MS.gene062242.t1.exon1;Parent=MS.gene062242.t1 |
| chr1.1 | CDS | 57420754 | 57420945 | 57420754 | ID=cds.MS.gene062242.t1;Parent=MS.gene062242.t1 |
| chr1.1 | exon | 57425018 | 57425371 | 57425018 | ID=MS.gene062242.t1.exon2;Parent=MS.gene062242.t1 |
| chr1.1 | CDS | 57425018 | 57425371 | 57425018 | ID=cds.MS.gene062242.t1;Parent=MS.gene062242.t1 |
| Gene Sequence |
| Protein sequence |
