Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28840.t1 | NP_001341006.1 | 100 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 8.10E-98 | 366.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28840.t1 | O48920 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.7e-100 | 364.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28840.t1 | A0A5D2G2X1 | 100.0 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 5.9e-98 | 366.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene28840 | 0.813996 | 1.93E-51 | -1.69E-46 |
| MS.gene049178 | MS.gene28840 | 0.828323 | 9.58E-55 | -1.69E-46 |
| MS.gene050114 | MS.gene28840 | 0.828617 | 8.14E-55 | -1.69E-46 |
| MS.gene050439 | MS.gene28840 | 0.994193 | 2.73E-205 | -1.69E-46 |
| MS.gene051490 | MS.gene28840 | 0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene28840 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene055313 | MS.gene28840 | 0.834503 | 2.89E-56 | -1.69E-46 |
| MS.gene055314 | MS.gene28840 | 0.803487 | 3.41E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene28840 | 0.810545 | 1.09E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene28840 | 0.805702 | 1.17E-49 | -1.69E-46 |
| MS.gene055603 | MS.gene28840 | 0.812907 | 3.35E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene28840 | 0.84416 | 8.98E-59 | -1.69E-46 |
| MS.gene058543 | MS.gene28840 | 0.815116 | 1.09E-51 | -1.69E-46 |
| MS.gene058639 | MS.gene28840 | 0.80518 | 1.51E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene28840 | 0.806225 | 9.12E-50 | -1.69E-46 |
| MS.gene059774 | MS.gene28840 | 0.810021 | 1.42E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene28840 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene28840 | 0.81253 | 4.05E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene28840 | 0.802108 | 6.56E-49 | -1.69E-46 |
| MS.gene060870 | MS.gene28840 | 0.803567 | 3.28E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28840.t1 | MTR_7g109960 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.29e-135 | 375 |
| MS.gene28840.t1 | MTR_6g005820 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.83e-135 | 374 |
| MS.gene28840.t1 | MTR_1g086480 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.77e-135 | 374 |
| MS.gene28840.t1 | MTR_5g034130 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene28840.t1 | MTR_5g034125 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.65e-134 | 373 |
| MS.gene28840.t1 | MTR_5g016540 | 86.111 | 180 | 25 | 0 | 1 | 180 | 1 | 180 | 2.07e-119 | 335 |
| MS.gene28840.t1 | MTR_4g128910 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 1.71e-84 | 247 |
| MS.gene28840.t1 | MTR_5g007810 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 6.89e-83 | 243 |
| MS.gene28840.t1 | MTR_4g077640 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.17e-80 | 238 |
| MS.gene28840.t1 | MTR_5g007820 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 9.18e-76 | 225 |
| MS.gene28840.t1 | MTR_1g076550 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.62e-67 | 204 |
| MS.gene28840.t1 | MTR_5g007840 | 42.723 | 213 | 77 | 2 | 1 | 180 | 1 | 201 | 2.24e-57 | 179 |
| MS.gene28840.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 2.83e-50 | 160 |
| MS.gene28840.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 43 | 206 | 4.76e-50 | 160 |
| MS.gene28840.t1 | MTR_2g022200 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 4.60e-37 | 127 |
| MS.gene28840.t1 | MTR_5g078090 | 34.659 | 176 | 112 | 2 | 1 | 173 | 1 | 176 | 4.00e-31 | 111 |
| MS.gene28840.t1 | MTR_5g015370 | 32.609 | 184 | 121 | 2 | 1 | 181 | 1 | 184 | 1.39e-30 | 110 |
| MS.gene28840.t1 | MTR_8g077540 | 51.020 | 98 | 46 | 2 | 18 | 114 | 17 | 113 | 1.57e-28 | 103 |
| MS.gene28840.t1 | MTR_4g026950 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 2.22e-26 | 99.0 |
| MS.gene28840.t1 | MTR_2g034640 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.12e-24 | 95.1 |
| MS.gene28840.t1 | MTR_7g112090 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 3.22e-24 | 94.0 |
| MS.gene28840.t1 | MTR_4g121860 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 7.47e-23 | 90.5 |
| MS.gene28840.t1 | MTR_1g062760 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.87e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28840.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene28840.t1 | AT1G10630 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 8.87e-135 | 374 |
| MS.gene28840.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene28840.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene28840.t1 | AT2G47170 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 2.23e-134 | 373 |
| MS.gene28840.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene28840.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.78e-134 | 373 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G23490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT1G70490 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 6.06e-134 | 372 |
| MS.gene28840.t1 | AT5G14670 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.46e-133 | 370 |
| MS.gene28840.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene28840.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene28840.t1 | AT3G62290 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.04e-133 | 370 |
| MS.gene28840.t1 | AT2G15310 | 66.851 | 181 | 60 | 0 | 1 | 181 | 1 | 181 | 1.94e-90 | 263 |
| MS.gene28840.t1 | AT2G24765 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 5.73e-85 | 248 |
| MS.gene28840.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene28840.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 2.40e-81 | 239 |
| MS.gene28840.t1 | AT3G03120 | 59.887 | 177 | 71 | 0 | 1 | 177 | 1 | 177 | 1.05e-80 | 238 |
| MS.gene28840.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene28840.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.11e-70 | 212 |
| MS.gene28840.t1 | AT2G24765 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.36e-60 | 185 |
| MS.gene28840.t1 | AT3G03120 | 62.308 | 130 | 49 | 0 | 1 | 130 | 1 | 130 | 1.12e-59 | 182 |
| MS.gene28840.t1 | AT1G02430 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 6.85e-57 | 177 |
| MS.gene28840.t1 | AT1G02440 | 45.699 | 186 | 91 | 4 | 1 | 176 | 1 | 186 | 2.32e-55 | 173 |
| MS.gene28840.t1 | AT2G18390 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 1.06e-49 | 159 |
| MS.gene28840.t1 | AT1G02430 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 3.51e-45 | 147 |
| MS.gene28840.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene28840.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.50e-36 | 124 |
| MS.gene28840.t1 | AT3G49870 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 7.32e-33 | 116 |
| MS.gene28840.t1 | AT5G67560 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 2.31e-31 | 112 |
| MS.gene28840.t1 | AT5G37680 | 33.523 | 176 | 114 | 2 | 1 | 173 | 1 | 176 | 1.85e-30 | 110 |
| MS.gene28840.t1 | AT3G49870 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 1.71e-29 | 107 |
| MS.gene28840.t1 | AT3G49860 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 7.02e-29 | 105 |
| MS.gene28840.t1 | AT1G02440 | 33.117 | 154 | 67 | 3 | 1 | 153 | 1 | 119 | 3.32e-26 | 97.4 |
| MS.gene28840.t1 | AT1G09180 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 3.66e-25 | 96.7 |
| MS.gene28840.t1 | AT3G62560 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.44e-24 | 95.1 |
| MS.gene28840.t1 | AT5G37680 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 4.18e-24 | 92.4 |
| MS.gene28840.t1 | AT1G56330 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 5.75e-24 | 93.6 |
| MS.gene28840.t1 | AT4G02080 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 6.33e-24 | 93.6 |
Find 45 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTAGATCCGTCCTTTA+TGG | 0.101427 | 7.4:+5509589 | MS.gene28840:intron |
| TTTCCTTCTTCGCAAATAAC+CGG | 0.361975 | 7.4:-5507059 | None:intergenic |
| TGAAAGTAATGTCTCCATAA+AGG | 0.367407 | 7.4:-5509603 | None:intergenic |
| GAAGGAAATGCGTATACTTA+TGG | 0.381963 | 7.4:+5507074 | MS.gene28840:CDS |
| TCAGCAGCATTCATAGCATT+TGG | 0.385055 | 7.4:-5509873 | None:intergenic |
| CAGCCGGTTATTTGCGAAGA+AGG | 0.398980 | 7.4:+5507056 | MS.gene28840:CDS |
| CAGAGGTAGCACATGTGCTC+TGG | 0.443544 | 7.4:-5510039 | None:intergenic |
| ATTCACTTCGTCAGCGTCAC+TGG | 0.458451 | 7.4:+5509919 | MS.gene28840:CDS |
| AGCTTTACTGTGTGGGATGT+TGG | 0.474274 | 7.4:+5507602 | MS.gene28840:CDS |
| CTCAAACAACATTGCAAGCA+AGG | 0.495880 | 7.4:+5510093 | MS.gene28840:CDS |
| ATTCTCTATAAGCTCAAGCT+TGG | 0.498460 | 7.4:+5507126 | MS.gene28840:CDS |
| GTCACCACCATTCCCACCAT+TGG | 0.507944 | 7.4:+5507156 | MS.gene28840:CDS |
| ATTGTAAAACTTACCAATGG+TGG | 0.508835 | 7.4:-5507169 | None:intergenic |
| AAGCTAGGGACGAGCTGCAC+AGG | 0.511385 | 7.4:+5509682 | MS.gene28840:CDS |
| TGTGTGGGATGTTGGTGGCC+AGG | 0.523027 | 7.4:+5507610 | MS.gene28840:CDS |
| CAGAGCACATGTGCTACCTC+TGG | 0.523931 | 7.4:+5510040 | MS.gene28840:CDS |
| AAGCTTGAGCTTATAGAGAA+TGG | 0.532263 | 7.4:-5507124 | None:intergenic |
| GAACATTAGCTTTACTGTGT+GGG | 0.534133 | 7.4:+5507595 | MS.gene28840:CDS |
| TTTACTGTGTGGGATGTTGG+TGG | 0.540094 | 7.4:+5507605 | MS.gene28840:CDS |
| AAATAACCGGCTGAATAGCT+TGG | 0.543563 | 7.4:-5507046 | None:intergenic |
| AATATAGAAATACCTTGTCC+TGG | 0.547425 | 7.4:-5507628 | None:intergenic |
| ATTTGGTGTAGGGTTTAATG+TGG | 0.553247 | 7.4:+5507556 | MS.gene28840:intron |
| GCTGAAATAACTGATAAGCT+AGG | 0.555145 | 7.4:+5509891 | MS.gene28840:CDS |
| AGATCGTGTTGTTGAAGCTA+GGG | 0.564599 | 7.4:+5509668 | MS.gene28840:CDS |
| GGATGTTGGTGGCCAGGACA+AGG | 0.567218 | 7.4:+5507616 | MS.gene28840:CDS |
| AAACTTACCAATGGTGGGAA+TGG | 0.569667 | 7.4:-5507163 | None:intergenic |
| TAGCTTCAACAACACGATCT+CGG | 0.576560 | 7.4:-5509665 | None:intergenic |
| CATTCACCAAGCTATTCAGC+CGG | 0.576922 | 7.4:+5507040 | MS.gene28840:CDS |
| GAGATCGTGTTGTTGAAGCT+AGG | 0.579112 | 7.4:+5509667 | MS.gene28840:CDS |
| ATGGTCGGTCTCGATGCCGC+TGG | 0.579718 | 7.4:+5507093 | MS.gene28840:CDS |
| TTGTAAAACTTACCAATGGT+GGG | 0.580371 | 7.4:-5507168 | None:intergenic |
| CATTACTTTCAAAATACACA+AGG | 0.584201 | 7.4:+5509615 | MS.gene28840:CDS |
| TCTGGTGAAGGACTTTATGA+AGG | 0.585343 | 7.4:+5510058 | MS.gene28840:CDS |
| ACATGTGCTACCTCTGGTGA+AGG | 0.597179 | 7.4:+5510046 | MS.gene28840:CDS |
| GACTTTATGAAGGACTAGAC+TGG | 0.599016 | 7.4:+5510068 | MS.gene28840:CDS |
| AGTAATGTCTCCATAAAGGA+CGG | 0.609070 | 7.4:-5509599 | None:intergenic |
| CTTACCAATGGTGGGAATGG+TGG | 0.612027 | 7.4:-5507160 | None:intergenic |
| AGGGTTTAATGTGGAAACTG+TGG | 0.625050 | 7.4:+5507565 | MS.gene28840:intron |
| TTCATAAAGTCCTTCACCAG+AGG | 0.636014 | 7.4:-5510056 | None:intergenic |
| AGAACATTAGCTTTACTGTG+TGG | 0.640151 | 7.4:+5507594 | MS.gene28840:CDS |
| CTTGAGCTTATAGAGAATGG+TGG | 0.640806 | 7.4:-5507121 | None:intergenic |
| GAAATGCGTATACTTATGGT+CGG | 0.647571 | 7.4:+5507078 | MS.gene28840:CDS |
| ATTACTTTCAAAATACACAA+GGG | 0.655008 | 7.4:+5509616 | MS.gene28840:CDS |
| GAGAATGGTGGTCTTACCAG+CGG | 0.666289 | 7.4:-5507109 | None:intergenic |
| GCTGCACAGGATGTTAAACG+AGG | 0.784396 | 7.4:+5509695 | MS.gene28840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTCAAAGATAAAAATATA+TGG | - | chr7.4:5509531-5509550 | None:intergenic | 15.0% |
| !! | GATTTACAAATTATGTTATA+AGG | + | chr7.4:5508479-5508498 | MS.gene28840:intron | 15.0% |
| !!! | ATTAAATTTTAATGTGCATT+GGG | - | chr7.4:5509383-5509402 | None:intergenic | 15.0% |
| !! | AACTTTGCAATTTAAATTAC+AGG | + | chr7.4:5510141-5510160 | MS.gene28840:intron | 20.0% |
| !! | ACAGACTATTAACAAATATT+AGG | - | chr7.4:5509049-5509068 | None:intergenic | 20.0% |
| !! | ATTACTTTCAAAATACACAA+GGG | + | chr7.4:5509616-5509635 | MS.gene28840:CDS | 20.0% |
| !! | CAAAGATAAAAATATATGGT+TGG | - | chr7.4:5509527-5509546 | None:intergenic | 20.0% |
| !! | GAATGTATTATTGATAGAAA+AGG | - | chr7.4:5508706-5508725 | None:intergenic | 20.0% |
| !! | TCAAAACAAAATATGTATCT+TGG | - | chr7.4:5509134-5509153 | None:intergenic | 20.0% |
| !! | TTATACTAAATAGCATATCA+CGG | - | chr7.4:5507984-5508003 | None:intergenic | 20.0% |
| !!! | GATTAAATTTTAATGTGCAT+TGG | - | chr7.4:5509384-5509403 | None:intergenic | 20.0% |
| !!! | TATTTTGTTATTTGTTTTGC+AGG | + | chr7.4:5510192-5510211 | MS.gene28840:intron | 20.0% |
| !!! | TCATTGTTTTTATTTTTGCT+TGG | + | chr7.4:5508982-5509001 | MS.gene28840:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+TGG | - | chr7.4:5507257-5507276 | None:intergenic | 20.0% |
| !!! | TTTTGATGATATAGATGATT+TGG | + | chr7.4:5507539-5507558 | MS.gene28840:intron | 20.0% |
| ! | AAAAGAGATAAATCTCTCTT+TGG | - | chr7.4:5508563-5508582 | None:intergenic | 25.0% |
| ! | AAATAGGATGATGATTCAAT+GGG | - | chr7.4:5508336-5508355 | None:intergenic | 25.0% |
| ! | AAATGAGTGAAATGACAAAT+AGG | - | chr7.4:5508352-5508371 | None:intergenic | 25.0% |
| ! | AACCATTGTTCTGTTATAAA+AGG | - | chr7.4:5507893-5507912 | None:intergenic | 25.0% |
| ! | AATGAATGAATGTGAGAATT+TGG | + | chr7.4:5509735-5509754 | MS.gene28840:intron | 25.0% |
| ! | ACTCTTATGTTTATGAATGT+TGG | + | chr7.4:5509434-5509453 | MS.gene28840:intron | 25.0% |
| ! | AGATAAAAATATATGGTTGG+AGG | - | chr7.4:5509524-5509543 | None:intergenic | 25.0% |
| ! | ATGTTGTGAAACAATCATTA+AGG | + | chr7.4:5508869-5508888 | MS.gene28840:intron | 25.0% |
| ! | CAATTCCTTTCTATAAACAA+TGG | + | chr7.4:5507188-5507207 | MS.gene28840:intron | 25.0% |
| ! | CATTACCATTGTTTATAGAA+AGG | - | chr7.4:5507196-5507215 | None:intergenic | 25.0% |
| ! | CATTACTTTCAAAATACACA+AGG | + | chr7.4:5509615-5509634 | MS.gene28840:CDS | 25.0% |
| ! | GATATAAAACTAGTTACAGT+AGG | + | chr7.4:5507829-5507848 | MS.gene28840:intron | 25.0% |
| ! | GTAATGATAATTATGAAGCA+CGG | + | chr7.4:5507210-5507229 | MS.gene28840:intron | 25.0% |
| ! | GTTCTATCGTAAACTATAAT+TGG | - | chr7.4:5508897-5508916 | None:intergenic | 25.0% |
| ! | TAGTTTACGATAGAACATTA+TGG | + | chr7.4:5508901-5508920 | MS.gene28840:intron | 25.0% |
| ! | TCAAATATTAGAAGCTATAG+TGG | + | chr7.4:5508011-5508030 | MS.gene28840:intron | 25.0% |
| ! | TCTATGGTTATAATATTGTC+AGG | + | chr7.4:5509800-5509819 | MS.gene28840:intron | 25.0% |
| ! | TTATACCAAATAGCATATCA+CGG | - | chr7.4:5508089-5508108 | None:intergenic | 25.0% |
| !! | ATTTAGATTTTATCCCAGAT+AGG | - | chr7.4:5508800-5508819 | None:intergenic | 25.0% |
| !! | CTAAATTATGTCAAACCTTT+TGG | + | chr7.4:5509946-5509965 | MS.gene28840:intron | 25.0% |
| !! | CTATATTTGTGTGTATGTTT+TGG | + | chr7.4:5507644-5507663 | MS.gene28840:intron | 25.0% |
| !! | TAATAAGAAAAGCATATCGA+TGG | - | chr7.4:5509576-5509595 | None:intergenic | 25.0% |
| !! | TATTAGTTTCATTCCTATCT+GGG | + | chr7.4:5508784-5508803 | MS.gene28840:intron | 25.0% |
| !! | TGATTTTATGATATGACGAT+TGG | + | chr7.4:5507716-5507735 | MS.gene28840:intron | 25.0% |
| !!! | CACATGACTTGTTAAAATTA+TGG | + | chr7.4:5509340-5509359 | MS.gene28840:intron | 25.0% |
| !!! | GCTACTCTGTTTTTATTTAT+GGG | + | chr7.4:5507753-5507772 | MS.gene28840:intron | 25.0% |
| !!! | TTCGCTTGTTATCTTAATTT+TGG | + | chr7.4:5508723-5508742 | MS.gene28840:intron | 25.0% |
| AAACCAGATACAATCTGAAA+AGG | + | chr7.4:5507452-5507471 | MS.gene28840:intron | 30.0% | |
| AACCAGATACAATCTGAAAA+GGG | + | chr7.4:5507453-5507472 | MS.gene28840:intron | 30.0% | |
| AAGATGCCTATGTGTATAAT+TGG | - | chr7.4:5509412-5509431 | None:intergenic | 30.0% | |
| AATATAGAAATACCTTGTCC+TGG | - | chr7.4:5507631-5507650 | None:intergenic | 30.0% | |
| AATCATTATCCAACTAAGTG+GGG | - | chr7.4:5508950-5508969 | None:intergenic | 30.0% | |
| AATTGGAAAATGGAGGAAAT+TGG | + | chr7.4:5508445-5508464 | MS.gene28840:intron | 30.0% | |
| AGAAAGCAATCAGAAAATCA+AGG | - | chr7.4:5509783-5509802 | None:intergenic | 30.0% | |
| AGGATTCAAATTGAGAAGTA+TGG | + | chr7.4:5508399-5508418 | MS.gene28840:intron | 30.0% | |
| AGTGATTGTAGTGTCAATTA+AGG | + | chr7.4:5509262-5509281 | MS.gene28840:intron | 30.0% | |
| ATAGAACAAGTAGATGAGAA+TGG | - | chr7.4:5510005-5510024 | None:intergenic | 30.0% | |
| ATTCTCACATTCATTCATTG+AGG | - | chr7.4:5509734-5509753 | None:intergenic | 30.0% | |
| ATTGGAAAATGGAGGAAATT+GGG | + | chr7.4:5508446-5508465 | MS.gene28840:intron | 30.0% | |
| ATTGTAAAACTTACCAATGG+TGG | - | chr7.4:5507172-5507191 | None:intergenic | 30.0% | |
| CAAACATGCTAGAATTTACT+AGG | + | chr7.4:5509072-5509091 | MS.gene28840:intron | 30.0% | |
| CAAATAGGATGATGATTCAA+TGG | - | chr7.4:5508337-5508356 | None:intergenic | 30.0% | |
| CAATCAGAAAATCAAGGTAT+AGG | - | chr7.4:5509777-5509796 | None:intergenic | 30.0% | |
| CAATCATTATCCAACTAAGT+GGG | - | chr7.4:5508951-5508970 | None:intergenic | 30.0% | |
| CATTGTTCTGTTATAAAAGG+TGG | - | chr7.4:5507890-5507909 | None:intergenic | 30.0% | |
| CCTAAACCAATTATACACAT+AGG | + | chr7.4:5509403-5509422 | MS.gene28840:intron | 30.0% | |
| CTAGTAAATTCTAGCATGTT+TGG | - | chr7.4:5509074-5509093 | None:intergenic | 30.0% | |
| CTTTGCTTATAATAGTGACT+GGG | - | chr7.4:5507376-5507395 | None:intergenic | 30.0% | |
| GGAATTGTAAAACTTACCAA+TGG | - | chr7.4:5507175-5507194 | None:intergenic | 30.0% | |
| TAGAACATTATGGCGTAATT+TGG | + | chr7.4:5508911-5508930 | MS.gene28840:intron | 30.0% | |
| TAGAGGTGAAATGAAAGATA+AGG | + | chr7.4:5507786-5507805 | MS.gene28840:intron | 30.0% | |
| TAGATCAAAACTAAGCACTA+TGG | - | chr7.4:5509235-5509254 | None:intergenic | 30.0% | |
| TAGGAATGAAACTAATAGCA+AGG | - | chr7.4:5508781-5508800 | None:intergenic | 30.0% | |
| TCTTTGCTTATAATAGTGAC+TGG | - | chr7.4:5507377-5507396 | None:intergenic | 30.0% | |
| TGAAAGTAATGTCTCCATAA+AGG | - | chr7.4:5509606-5509625 | None:intergenic | 30.0% | |
| TTAGTTGGATAATGATTGGT+TGG | + | chr7.4:5508953-5508972 | MS.gene28840:intron | 30.0% | |
| TTATGTTTATGAATGTTGGC+TGG | + | chr7.4:5509438-5509457 | MS.gene28840:intron | 30.0% | |
| TTGTAAAACTTACCAATGGT+GGG | - | chr7.4:5507171-5507190 | None:intergenic | 30.0% | |
| TTTGCTTATAATAGTGACTG+GGG | - | chr7.4:5507375-5507394 | None:intergenic | 30.0% | |
| ! | AGCCTAAAACTAACGATTTT+GGG | - | chr7.4:5508823-5508842 | None:intergenic | 30.0% |
| ! | ATATGACGATTGGTTGAAAT+TGG | + | chr7.4:5507726-5507745 | MS.gene28840:intron | 30.0% |
| ! | CACCTTTTATAACAGAACAA+TGG | + | chr7.4:5507888-5507907 | MS.gene28840:intron | 30.0% |
| ! | CCTATGTGTATAATTGGTTT+AGG | - | chr7.4:5509406-5509425 | None:intergenic | 30.0% |
| ! | CTATTAGTTTCATTCCTATC+TGG | + | chr7.4:5508783-5508802 | MS.gene28840:intron | 30.0% |
| ! | CTTTTCTGTTAGAACTGTAA+AGG | + | chr7.4:5508533-5508552 | MS.gene28840:intron | 30.0% |
| ! | GAGAGATTTATCTCTTTTTG+AGG | + | chr7.4:5508565-5508584 | MS.gene28840:intron | 30.0% |
| ! | GATTTTCTGATTGCTTTCTA+TGG | + | chr7.4:5509784-5509803 | MS.gene28840:intron | 30.0% |
| ! | GGATTCAAATTGAGAAGTAT+GGG | + | chr7.4:5508400-5508419 | MS.gene28840:intron | 30.0% |
| !! | GATATAGATGATTTGGTGTA+GGG | + | chr7.4:5507546-5507565 | MS.gene28840:intron | 30.0% |
| !! | TGATATAGATGATTTGGTGT+AGG | + | chr7.4:5507545-5507564 | MS.gene28840:intron | 30.0% |
| !!! | ATCCCAAAATCGTTAGTTTT+AGG | + | chr7.4:5508818-5508837 | MS.gene28840:intron | 30.0% |
| !!! | CAGAGAGAGTATTTTATCAA+GGG | + | chr7.4:5507498-5507517 | MS.gene28840:intron | 30.0% |
| !!! | GGCTACTCTGTTTTTATTTA+TGG | + | chr7.4:5507752-5507771 | MS.gene28840:intron | 30.0% |
| AAATTAAGGAGACGACCAAA+AGG | - | chr7.4:5509964-5509983 | None:intergenic | 35.0% | |
| AAGCTTGAGCTTATAGAGAA+TGG | - | chr7.4:5507127-5507146 | None:intergenic | 35.0% | |
| AGTAATGTCTCCATAAAGGA+CGG | - | chr7.4:5509602-5509621 | None:intergenic | 35.0% | |
| ATGCAAGGGTTATCCAAAAT+AGG | - | chr7.4:5508296-5508315 | None:intergenic | 35.0% | |
| ATTCTCTATAAGCTCAAGCT+TGG | + | chr7.4:5507126-5507145 | MS.gene28840:CDS | 35.0% | |
| CACGGATGGACAATTATATA+CGG | + | chr7.4:5507228-5507247 | MS.gene28840:intron | 35.0% | |
| CCAATCATTATCCAACTAAG+TGG | - | chr7.4:5508952-5508971 | None:intergenic | 35.0% | |
| CCACTTAGTTGGATAATGAT+TGG | + | chr7.4:5508949-5508968 | MS.gene28840:intron | 35.0% | |
| CCTTGATAAAATACTCTCTC+TGG | - | chr7.4:5507500-5507519 | None:intergenic | 35.0% | |
| CTTATTAGATCCGTCCTTTA+TGG | + | chr7.4:5509589-5509608 | MS.gene28840:intron | 35.0% | |
| GAAATGCGTATACTTATGGT+CGG | + | chr7.4:5507078-5507097 | MS.gene28840:CDS | 35.0% | |
| GAAGGAAATGCGTATACTTA+TGG | + | chr7.4:5507074-5507093 | MS.gene28840:CDS | 35.0% | |
| GCTAGAATTTACTAGGTAGT+CGG | + | chr7.4:5509079-5509098 | MS.gene28840:intron | 35.0% | |
| GCTGAAATAACTGATAAGCT+AGG | + | chr7.4:5509891-5509910 | MS.gene28840:CDS | 35.0% | |
| TAAAAACTGCCAAACACTCT+TGG | - | chr7.4:5509307-5509326 | None:intergenic | 35.0% | |
| TCTACTTGTTCTATATGTGC+AGG | + | chr7.4:5510011-5510030 | MS.gene28840:intron | 35.0% | |
| TCTGTTAGAACTGTAAAGGT+TGG | + | chr7.4:5508537-5508556 | MS.gene28840:intron | 35.0% | |
| TGATAATTATGAAGCACGGA+TGG | + | chr7.4:5507214-5507233 | MS.gene28840:intron | 35.0% | |
| TTCCTATCATCAAGAGACTT+GGG | + | chr7.4:5508747-5508766 | MS.gene28840:intron | 35.0% | |
| TTGCTTATAATAGTGACTGG+GGG | - | chr7.4:5507374-5507393 | None:intergenic | 35.0% | |
| TTGTAGAACTGTCAAGTGTT+AGG | + | chr7.4:5508379-5508398 | MS.gene28840:intron | 35.0% | |
| TTGTTCCGTGATATGCTATT+TGG | + | chr7.4:5507976-5507995 | MS.gene28840:intron | 35.0% | |
| TTTAATGTGCATTGGGTGTA+AGG | - | chr7.4:5509376-5509395 | None:intergenic | 35.0% | |
| TTTCCTATCATCAAGAGACT+TGG | + | chr7.4:5508746-5508765 | MS.gene28840:intron | 35.0% | |
| TTTCCTTCTTCGCAAATAAC+CGG | - | chr7.4:5507062-5507081 | None:intergenic | 35.0% | |
| ! | ACGATTGGTTGAAATTGGTA+TGG | + | chr7.4:5507731-5507750 | MS.gene28840:intron | 35.0% |
| ! | CAGCCTAAAACTAACGATTT+TGG | - | chr7.4:5508824-5508843 | None:intergenic | 35.0% |
| ! | TTCCCTTTTCAGATTGTATC+TGG | - | chr7.4:5507458-5507477 | None:intergenic | 35.0% |
| !! | AGAACATTAGCTTTACTGTG+TGG | + | chr7.4:5507594-5507613 | MS.gene28840:CDS | 35.0% |
| !! | ATTTGGTGTAGGGTTTAATG+TGG | + | chr7.4:5507556-5507575 | MS.gene28840:intron | 35.0% |
| !! | GAACATTAGCTTTACTGTGT+GGG | + | chr7.4:5507595-5507614 | MS.gene28840:CDS | 35.0% |
| !! | GAATTTGAACCAAGAGTGTT+TGG | + | chr7.4:5509295-5509314 | MS.gene28840:intron | 35.0% |
| !! | GTTTTAAATAGCAGCTAGAG+TGG | + | chr7.4:5507910-5507929 | MS.gene28840:intron | 35.0% |
| !! | TTGGTTGTTGTTGTTGTTTG+AGG | + | chr7.4:5508633-5508652 | MS.gene28840:intron | 35.0% |
| !!! | CCAGAGAGAGTATTTTATCA+AGG | + | chr7.4:5507497-5507516 | MS.gene28840:intron | 35.0% |
| !!! | TACACAAGGGCTTATTTTTG+TGG | + | chr7.4:5509629-5509648 | MS.gene28840:CDS | 35.0% |
| AAACAAGTCAAGAGGCCTAT+TGG | - | chr7.4:5508267-5508286 | None:intergenic | 40.0% | |
| AAATAACCGGCTGAATAGCT+TGG | - | chr7.4:5507049-5507068 | None:intergenic | 40.0% | |
| AAGCAGGGAAGAGGAAATTA+AGG | - | chr7.4:5509978-5509997 | None:intergenic | 40.0% | |
| AAGTAAGGTGATTTACGCCA+AGG | - | chr7.4:5509497-5509516 | None:intergenic | 40.0% | |
| AATGTCCGAGAGTAATGCAA+GGG | - | chr7.4:5508310-5508329 | None:intergenic | 40.0% | |
| ACTCACTCCCAATAACCAAT+AGG | + | chr7.4:5508249-5508268 | MS.gene28840:intron | 40.0% | |
| AGGGTTTAATGTGGAAACTG+TGG | + | chr7.4:5507565-5507584 | MS.gene28840:intron | 40.0% | |
| ATGGTTGGAGGTCAAAAGTA+AGG | - | chr7.4:5509512-5509531 | None:intergenic | 40.0% | |
| ATTATCCAACTAAGTGGGGT+CGG | - | chr7.4:5508946-5508965 | None:intergenic | 40.0% | |
| ATTGGTTATTGGGAGTGAGT+TGG | - | chr7.4:5508249-5508268 | None:intergenic | 40.0% | |
| CATACTGTATCACAATGGAG+AGG | - | chr7.4:5509109-5509128 | None:intergenic | 40.0% | |
| CTCAAACAACATTGCAAGCA+AGG | + | chr7.4:5510093-5510112 | MS.gene28840:CDS | 40.0% | |
| CTTGAGCTTATAGAGAATGG+TGG | - | chr7.4:5507124-5507143 | None:intergenic | 40.0% | |
| GACTTTATGAAGGACTAGAC+TGG | + | chr7.4:5510068-5510087 | MS.gene28840:CDS | 40.0% | |
| GATAACCCTTGCATTACTCT+CGG | + | chr7.4:5508302-5508321 | MS.gene28840:intron | 40.0% | |
| GTTGTAGCACTGTTGTATAG+CGG | + | chr7.4:5508035-5508054 | MS.gene28840:intron | 40.0% | |
| TAGCTTCAACAACACGATCT+CGG | - | chr7.4:5509668-5509687 | None:intergenic | 40.0% | |
| TCAGCAGCATTCATAGCATT+TGG | - | chr7.4:5509876-5509895 | None:intergenic | 40.0% | |
| TCTGGTGAAGGACTTTATGA+AGG | + | chr7.4:5510058-5510077 | MS.gene28840:CDS | 40.0% | |
| TGGCTCATACTGTATCACAA+TGG | - | chr7.4:5509114-5509133 | None:intergenic | 40.0% | |
| TGTGGGGGAAAATTGGAAAA+TGG | + | chr7.4:5508435-5508454 | MS.gene28840:intron | 40.0% | |
| TTATGGGTTTCATGCGATAG+AGG | + | chr7.4:5507769-5507788 | MS.gene28840:intron | 40.0% | |
| TTCATAAAGTCCTTCACCAG+AGG | - | chr7.4:5510059-5510078 | None:intergenic | 40.0% | |
| ! | AAACTTACCAATGGTGGGAA+TGG | - | chr7.4:5507166-5507185 | None:intergenic | 40.0% |
| ! | AACCCAAGTCTCTTGATGAT+AGG | - | chr7.4:5508752-5508771 | None:intergenic | 40.0% |
| ! | AATTTTCTGCGATGCGTGAT+TGG | + | chr7.4:5508179-5508198 | MS.gene28840:intron | 40.0% |
| ! | AGATCGTGTTGTTGAAGCTA+GGG | + | chr7.4:5509668-5509687 | MS.gene28840:CDS | 40.0% |
| ! | CAAGAGGCCTATTGGTTATT+GGG | - | chr7.4:5508259-5508278 | None:intergenic | 40.0% |
| ! | TCAAGAGGCCTATTGGTTAT+TGG | - | chr7.4:5508260-5508279 | None:intergenic | 40.0% |
| !! | CTTGTTTCTTGGGCCTATTT+TGG | + | chr7.4:5508280-5508299 | MS.gene28840:intron | 40.0% |
| !! | TTTGGTACATCGCTGTTTCT+TGG | + | chr7.4:5507662-5507681 | MS.gene28840:intron | 40.0% |
| !!! | CGTTAGTTTTAGGCTGTTAC+TGG | + | chr7.4:5508828-5508847 | MS.gene28840:intron | 40.0% |
| AGAGTGATGTGGGGGAAAAT+TGG | + | chr7.4:5508428-5508447 | MS.gene28840:intron | 45.0% | |
| AGATGAGAATGGACAGAAGC+AGG | - | chr7.4:5509994-5510013 | None:intergenic | 45.0% | |
| AGCTTTACTGTGTGGGATGT+TGG | + | chr7.4:5507602-5507621 | MS.gene28840:CDS | 45.0% | |
| AGTCTATTGCTAACGTGGAC+TGG | + | chr7.4:5509465-5509484 | MS.gene28840:intron | 45.0% | |
| CAATGTCCGAGAGTAATGCA+AGG | - | chr7.4:5508311-5508330 | None:intergenic | 45.0% | |
| CATTCACCAAGCTATTCAGC+CGG | + | chr7.4:5507040-5507059 | MS.gene28840:CDS | 45.0% | |
| GATGAGAATGGACAGAAGCA+GGG | - | chr7.4:5509993-5510012 | None:intergenic | 45.0% | |
| GGGGGAAAATTGGAAAATGG+AGG | + | chr7.4:5508438-5508457 | MS.gene28840:intron | 45.0% | |
| GTCTCAGTCTATTGCTAACG+TGG | + | chr7.4:5509460-5509479 | MS.gene28840:intron | 45.0% | |
| TATTAGCCGTGTCTAGGTGT+CGG | - | chr7.4:5507330-5507349 | None:intergenic | 45.0% | |
| TGTTTCTTGGCGGCGTAATA+TGG | + | chr7.4:5507675-5507694 | MS.gene28840:intron | 45.0% | |
| TTTACTGTGTGGGATGTTGG+TGG | + | chr7.4:5507605-5507624 | MS.gene28840:CDS | 45.0% | |
| TTTCCCCCACATCACTCTTT+GGG | - | chr7.4:5508426-5508445 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr7.4:5508615-5508634 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr7.4:5508616-5508635 | None:intergenic | 45.0% |
| ! | GAGATCGTGTTGTTGAAGCT+AGG | + | chr7.4:5509667-5509686 | MS.gene28840:CDS | 45.0% |
| ! | TTTTCCCCCACATCACTCTT+TGG | - | chr7.4:5508427-5508446 | None:intergenic | 45.0% |
| !! | AGGCCTCTTGACTTGTTTCT+TGG | + | chr7.4:5508269-5508288 | MS.gene28840:intron | 45.0% |
| !! | GGCCTCTTGACTTGTTTCTT+GGG | + | chr7.4:5508270-5508289 | MS.gene28840:intron | 45.0% |
| !! | TTTGAGGTGCACTAGCTCTA+GGG | + | chr7.4:5508649-5508668 | MS.gene28840:intron | 45.0% |
| AATGGACAGAAGCAGGGAAG+AGG | - | chr7.4:5509987-5510006 | None:intergenic | 50.0% | |
| ACATGTCCGACACCTAGACA+CGG | + | chr7.4:5507321-5507340 | MS.gene28840:intron | 50.0% | |
| ACATGTGCTACCTCTGGTGA+AGG | + | chr7.4:5510046-5510065 | MS.gene28840:CDS | 50.0% | |
| ACTAAGTGGGGTCGGATACA+TGG | - | chr7.4:5508938-5508957 | None:intergenic | 50.0% | |
| ATGGAGGAAATTGGGTGACG+TGG | + | chr7.4:5508454-5508473 | MS.gene28840:intron | 50.0% | |
| ATGGGCCCAAAGAGTGATGT+GGG | + | chr7.4:5508418-5508437 | MS.gene28840:intron | 50.0% | |
| ATTCACTTCGTCAGCGTCAC+TGG | + | chr7.4:5509919-5509938 | MS.gene28840:CDS | 50.0% | |
| CAGCCGGTTATTTGCGAAGA+AGG | + | chr7.4:5507056-5507075 | MS.gene28840:CDS | 50.0% | |
| CCAACGTATTAGCCGTGTCT+AGG | - | chr7.4:5507336-5507355 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr7.4:5508614-5508633 | MS.gene28840:intron | 50.0% | |
| CCTAGACACGGCTAATACGT+TGG | + | chr7.4:5507333-5507352 | MS.gene28840:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr7.4:5508611-5508630 | None:intergenic | 50.0% | |
| GCTGCACAGGATGTTAAACG+AGG | + | chr7.4:5509695-5509714 | MS.gene28840:CDS | 50.0% | |
| GGCCCAAGAAACAAGTCAAG+AGG | - | chr7.4:5508275-5508294 | None:intergenic | 50.0% | |
| TATGGGCCCAAAGAGTGATG+TGG | + | chr7.4:5508417-5508436 | MS.gene28840:intron | 50.0% | |
| TGTATCCGACCCCACTTAGT+TGG | + | chr7.4:5508938-5508957 | MS.gene28840:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr7.4:5508617-5508636 | None:intergenic | 50.0% |
| ! | CTTACCAATGGTGGGAATGG+TGG | - | chr7.4:5507163-5507182 | None:intergenic | 50.0% |
| ! | GAGAATGGTGGTCTTACCAG+CGG | - | chr7.4:5507112-5507131 | None:intergenic | 50.0% |
| ! | GTTTGAGGTGCACTAGCTCT+AGG | + | chr7.4:5508648-5508667 | MS.gene28840:intron | 50.0% |
| !! | ACGTGGACTGGCTTAAACCT+TGG | + | chr7.4:5509477-5509496 | MS.gene28840:intron | 50.0% |
| !! | GCACTAGCTCTAGGGTTACA+AGG | + | chr7.4:5508657-5508676 | MS.gene28840:intron | 50.0% |
| !! | GGTACATCGCTGTTTCTTGG+CGG | + | chr7.4:5507665-5507684 | MS.gene28840:intron | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr7.4:5508603-5508622 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr7.4:5508602-5508621 | MS.gene28840:intron | 55.0% | |
| CAGAGCACATGTGCTACCTC+TGG | + | chr7.4:5510040-5510059 | MS.gene28840:CDS | 55.0% | |
| CAGAGGTAGCACATGTGCTC+TGG | - | chr7.4:5510042-5510061 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr7.4:5508609-5508628 | MS.gene28840:intron | 55.0% | |
| GACATGTGTCGTGTCGGACA+CGG | - | chr7.4:5507308-5507327 | None:intergenic | 55.0% | |
| GTCACCACCATTCCCACCAT+TGG | + | chr7.4:5507156-5507175 | MS.gene28840:CDS | 55.0% | |
| GTGTCGGACATGTGTCGTGT+CGG | - | chr7.4:5507314-5507333 | None:intergenic | 55.0% | |
| TGGGCCCAAAGAGTGATGTG+GGG | + | chr7.4:5508419-5508438 | MS.gene28840:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr7.4:5508603-5508622 | MS.gene28840:intron | 55.0% | |
| AAGCTAGGGACGAGCTGCAC+AGG | + | chr7.4:5509682-5509701 | MS.gene28840:CDS | 60.0% | |
| GGGCCCAAAGAGTGATGTGG+GGG | + | chr7.4:5508420-5508439 | MS.gene28840:intron | 60.0% | |
| TGTGTCGTGTCGGACACGGT+CGG | - | chr7.4:5507304-5507323 | None:intergenic | 60.0% | |
| !! | GGATGTTGGTGGCCAGGACA+AGG | + | chr7.4:5507616-5507635 | MS.gene28840:CDS | 60.0% |
| !! | TGTGTGGGATGTTGGTGGCC+AGG | + | chr7.4:5507610-5507629 | MS.gene28840:CDS | 60.0% |
| ATGGTCGGTCTCGATGCCGC+TGG | + | chr7.4:5507093-5507112 | MS.gene28840:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5507030 | 5510219 | 5507030 | ID=MS.gene28840 |
| chr7.4 | mRNA | 5507030 | 5510219 | 5507030 | ID=MS.gene28840.t1;Parent=MS.gene28840 |
| chr7.4 | exon | 5507030 | 5507177 | 5507030 | ID=MS.gene28840.t1.exon1;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5507030 | 5507177 | 5507030 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| chr7.4 | exon | 5507567 | 5507637 | 5507567 | ID=MS.gene28840.t1.exon2;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5507567 | 5507637 | 5507567 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| chr7.4 | exon | 5509597 | 5509716 | 5509597 | ID=MS.gene28840.t1.exon3;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5509597 | 5509716 | 5509597 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| chr7.4 | exon | 5509822 | 5509940 | 5509822 | ID=MS.gene28840.t1.exon4;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5509822 | 5509940 | 5509822 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| chr7.4 | exon | 5510033 | 5510114 | 5510033 | ID=MS.gene28840.t1.exon5;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5510033 | 5510114 | 5510033 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| chr7.4 | exon | 5510214 | 5510219 | 5510214 | ID=MS.gene28840.t1.exon6;Parent=MS.gene28840.t1 |
| chr7.4 | CDS | 5510214 | 5510219 | 5510214 | ID=cds.MS.gene28840.t1;Parent=MS.gene28840.t1 |
| Gene Sequence |
| Protein sequence |
