Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006540.t1 | XP_003607403.1 | 99.5 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 2.10E-107 | 398.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006540.t1 | P61209 | 63.5 | 178 | 65 | 0 | 1 | 178 | 1 | 178 | 5.8e-66 | 251.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006540.t1 | G7JRR7 | 99.5 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 1.5e-107 | 398.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006540.t1 | MTR_4g077640 | 99.487 | 195 | 1 | 0 | 1 | 195 | 1 | 195 | 2.80e-144 | 399 |
| MS.gene006540.t1 | MTR_5g007810 | 88.718 | 195 | 17 | 1 | 1 | 195 | 1 | 190 | 2.83e-128 | 358 |
| MS.gene006540.t1 | MTR_5g007820 | 77.660 | 188 | 40 | 1 | 1 | 186 | 1 | 188 | 1.35e-106 | 304 |
| MS.gene006540.t1 | MTR_5g007840 | 62.500 | 216 | 36 | 2 | 1 | 183 | 1 | 204 | 5.71e-89 | 259 |
| MS.gene006540.t1 | MTR_7g109960 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.56e-81 | 240 |
| MS.gene006540.t1 | MTR_1g086480 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.01e-81 | 239 |
| MS.gene006540.t1 | MTR_6g005820 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.88e-81 | 239 |
| MS.gene006540.t1 | MTR_5g034130 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 3.66e-81 | 239 |
| MS.gene006540.t1 | MTR_5g034125 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 3.66e-81 | 239 |
| MS.gene006540.t1 | MTR_5g016540 | 58.757 | 177 | 73 | 0 | 1 | 177 | 1 | 177 | 6.60e-78 | 231 |
| MS.gene006540.t1 | MTR_4g128910 | 56.742 | 178 | 77 | 0 | 1 | 178 | 1 | 178 | 3.51e-71 | 214 |
| MS.gene006540.t1 | MTR_1g076550 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 5.95e-59 | 183 |
| MS.gene006540.t1 | MTR_8g077540 | 44.304 | 158 | 85 | 3 | 18 | 173 | 17 | 173 | 1.21e-43 | 144 |
| MS.gene006540.t1 | MTR_8g077540 | 44.304 | 158 | 85 | 3 | 18 | 173 | 43 | 199 | 4.51e-43 | 143 |
| MS.gene006540.t1 | MTR_2g022200 | 31.579 | 190 | 119 | 2 | 1 | 181 | 1 | 188 | 1.93e-29 | 108 |
| MS.gene006540.t1 | MTR_5g078090 | 34.965 | 143 | 92 | 1 | 11 | 152 | 13 | 155 | 3.23e-27 | 102 |
| MS.gene006540.t1 | MTR_5g015370 | 31.788 | 151 | 102 | 1 | 3 | 152 | 5 | 155 | 4.60e-26 | 99.0 |
| MS.gene006540.t1 | MTR_8g077540 | 45.361 | 97 | 51 | 2 | 18 | 113 | 17 | 112 | 6.18e-26 | 97.4 |
| MS.gene006540.t1 | MTR_2g034640 | 29.843 | 191 | 114 | 3 | 8 | 178 | 3 | 193 | 1.72e-24 | 95.1 |
| MS.gene006540.t1 | MTR_4g121860 | 30.366 | 191 | 113 | 3 | 8 | 178 | 3 | 193 | 9.86e-24 | 93.2 |
| MS.gene006540.t1 | MTR_7g112090 | 29.319 | 191 | 115 | 3 | 8 | 178 | 3 | 193 | 6.61e-23 | 91.3 |
| MS.gene006540.t1 | MTR_4g026950 | 26.752 | 157 | 114 | 1 | 18 | 173 | 1 | 157 | 1.87e-20 | 84.0 |
| MS.gene006540.t1 | MTR_2g006010 | 52.381 | 63 | 15 | 1 | 28 | 90 | 21 | 68 | 1.03e-13 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006540.t1 | AT3G03120 | 91.534 | 189 | 16 | 0 | 1 | 189 | 1 | 189 | 3.11e-130 | 363 |
| MS.gene006540.t1 | AT5G17060 | 90.476 | 189 | 18 | 0 | 1 | 189 | 1 | 189 | 3.70e-130 | 363 |
| MS.gene006540.t1 | AT5G17060 | 90.476 | 189 | 18 | 0 | 1 | 189 | 1 | 189 | 3.70e-130 | 363 |
| MS.gene006540.t1 | AT3G03120 | 93.846 | 130 | 8 | 0 | 1 | 130 | 1 | 130 | 1.66e-87 | 253 |
| MS.gene006540.t1 | AT1G10630 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.60e-81 | 240 |
| MS.gene006540.t1 | AT1G10630 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 1.60e-81 | 240 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G23490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT1G70490 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 2.34e-81 | 239 |
| MS.gene006540.t1 | AT3G62290 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.38e-81 | 239 |
| MS.gene006540.t1 | AT3G62290 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.38e-81 | 239 |
| MS.gene006540.t1 | AT3G62290 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 4.38e-81 | 239 |
| MS.gene006540.t1 | AT2G47170 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.04e-81 | 239 |
| MS.gene006540.t1 | AT2G47170 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.04e-81 | 239 |
| MS.gene006540.t1 | AT2G47170 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 5.04e-81 | 239 |
| MS.gene006540.t1 | AT5G14670 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 6.35e-81 | 238 |
| MS.gene006540.t1 | AT5G14670 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 6.35e-81 | 238 |
| MS.gene006540.t1 | AT5G14670 | 61.017 | 177 | 69 | 0 | 1 | 177 | 1 | 177 | 8.47e-81 | 238 |
| MS.gene006540.t1 | AT2G24765 | 57.865 | 178 | 75 | 0 | 1 | 178 | 1 | 178 | 2.35e-73 | 219 |
| MS.gene006540.t1 | AT2G15310 | 53.158 | 190 | 87 | 1 | 1 | 188 | 1 | 190 | 2.84e-71 | 215 |
| MS.gene006540.t1 | AT3G22950 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.87e-61 | 189 |
| MS.gene006540.t1 | AT3G22950 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.87e-61 | 189 |
| MS.gene006540.t1 | AT2G24765 | 58.594 | 128 | 53 | 0 | 1 | 128 | 1 | 128 | 2.80e-51 | 162 |
| MS.gene006540.t1 | AT1G02430 | 43.684 | 190 | 97 | 4 | 1 | 180 | 1 | 190 | 1.26e-47 | 154 |
| MS.gene006540.t1 | AT1G02440 | 40.000 | 190 | 104 | 4 | 1 | 180 | 1 | 190 | 6.25e-45 | 147 |
| MS.gene006540.t1 | AT2G18390 | 45.570 | 158 | 83 | 3 | 18 | 173 | 17 | 173 | 2.60e-44 | 145 |
| MS.gene006540.t1 | AT1G02430 | 41.875 | 160 | 87 | 3 | 1 | 154 | 1 | 160 | 1.26e-35 | 123 |
| MS.gene006540.t1 | AT5G52210 | 33.702 | 181 | 113 | 2 | 8 | 181 | 8 | 188 | 6.21e-31 | 112 |
| MS.gene006540.t1 | AT5G52210 | 33.702 | 181 | 113 | 2 | 8 | 181 | 8 | 188 | 6.21e-31 | 112 |
| MS.gene006540.t1 | AT3G49870 | 30.814 | 172 | 118 | 1 | 3 | 173 | 5 | 176 | 2.14e-26 | 100 |
| MS.gene006540.t1 | AT5G37680 | 32.867 | 143 | 95 | 1 | 11 | 152 | 13 | 155 | 2.48e-26 | 99.8 |
| MS.gene006540.t1 | AT3G49860 | 32.117 | 137 | 92 | 1 | 17 | 152 | 11 | 147 | 2.73e-25 | 97.1 |
| MS.gene006540.t1 | AT5G67560 | 30.488 | 164 | 113 | 1 | 11 | 173 | 13 | 176 | 1.14e-24 | 95.5 |
| MS.gene006540.t1 | AT3G49870 | 30.573 | 157 | 108 | 1 | 18 | 173 | 1 | 157 | 8.85e-24 | 92.8 |
| MS.gene006540.t1 | AT3G62560 | 30.000 | 190 | 113 | 4 | 8 | 177 | 3 | 192 | 1.19e-22 | 90.5 |
| MS.gene006540.t1 | AT1G56330 | 28.421 | 190 | 116 | 2 | 8 | 177 | 3 | 192 | 1.32e-22 | 90.5 |
| MS.gene006540.t1 | AT4G02080 | 28.272 | 191 | 117 | 3 | 8 | 178 | 3 | 193 | 2.99e-22 | 89.4 |
| MS.gene006540.t1 | AT1G09180 | 28.796 | 191 | 116 | 3 | 8 | 178 | 3 | 193 | 7.61e-22 | 88.6 |
| MS.gene006540.t1 | AT5G37680 | 30.469 | 128 | 89 | 0 | 46 | 173 | 2 | 129 | 1.00e-21 | 86.7 |
| MS.gene006540.t1 | AT1G02440 | 31.613 | 155 | 70 | 4 | 1 | 154 | 1 | 120 | 1.32e-20 | 83.2 |
Find 48 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGCAAAGCAGGAATTTC+AGG | 0.253795 | 4.2:+32233788 | MS.gene006540:CDS |
| TGATGGCCTTTATGAGGGTT+TGG | 0.331261 | 4.2:+32235403 | MS.gene006540:CDS |
| TTGATCTAAAGAATAGAAAA+TGG | 0.336411 | 4.2:+32235351 | MS.gene006540:CDS |
| ACAAGGCACCTGTGCACTTA+AGG | 0.339217 | 4.2:+32235379 | MS.gene006540:CDS |
| AAACTCTTCGATTCCTTCTT+CGG | 0.364291 | 4.2:+32232268 | MS.gene006540:CDS |
| TTATCTACTGTTCCTACAAT+TGG | 0.369753 | 4.2:+32232988 | MS.gene006540:CDS |
| ATGACACTGTTGAGCATAAA+CGG | 0.386547 | 4.2:-32233917 | None:intergenic |
| GTCTGGACCGTGAGAGAATT+GGG | 0.392903 | 4.2:+32233766 | MS.gene006540:CDS |
| TAAGGGTGATGGCCTTTATG+AGG | 0.405630 | 4.2:+32235397 | MS.gene006540:CDS |
| AGGGAAGTGTGTGACGGATT+AGG | 0.411446 | 4.2:+32235323 | MS.gene006540:CDS |
| GTGGTTTAGGTTGTCATGCT+TGG | 0.425719 | 4.2:+32232910 | MS.gene006540:intron |
| AAATAAAACCCACCAATTGT+AGG | 0.427108 | 4.2:-32233000 | None:intergenic |
| AGTCTGGACCGTGAGAGAAT+TGG | 0.428076 | 4.2:+32233765 | MS.gene006540:CDS |
| GATATATGTTGTTGATAGTC+TGG | 0.429765 | 4.2:+32233749 | MS.gene006540:intron |
| ACATACCAGGTCTTGCTTGT+TGG | 0.438390 | 4.2:-32233951 | None:intergenic |
| CAAGGCACCTGTGCACTTAA+GGG | 0.443318 | 4.2:+32235380 | MS.gene006540:CDS |
| ACCAGTCCAAACCCTCATAA+AGG | 0.443770 | 4.2:-32235409 | None:intergenic |
| GCTGCTGGATACTCTTCATT+AGG | 0.445230 | 4.2:+32235458 | MS.gene006540:CDS |
| AAAGTGTCCTCAATTTCTCT+TGG | 0.449055 | 4.2:-32233521 | None:intergenic |
| TATGCTCAACAGTGTCATCT+TGG | 0.465762 | 4.2:+32233922 | MS.gene006540:CDS |
| ATGCTTGGTCTTGATGCTGC+TGG | 0.478012 | 4.2:+32232925 | MS.gene006540:CDS |
| TTGCTTTCCCAATTCTCTCA+CGG | 0.480979 | 4.2:-32233773 | None:intergenic |
| AAGAGAAATTGAGGACACTT+TGG | 0.498427 | 4.2:+32233523 | MS.gene006540:CDS |
| CATCTCGGTATTGCCGAAGA+AGG | 0.507052 | 4.2:-32232281 | None:intergenic |
| TTCACGGTTTGGGATGTTGG+AGG | 0.507103 | 4.2:+32233498 | MS.gene006540:CDS |
| GAGAATTGGGAAAGCAAAGC+AGG | 0.509211 | 4.2:+32233779 | MS.gene006540:CDS |
| GCCTTTATGAGGGTTTGGAC+TGG | 0.513026 | 4.2:+32235408 | MS.gene006540:CDS |
| CTGAAGGAGATGAAGGCTGC+TGG | 0.519424 | 4.2:+32235443 | MS.gene006540:CDS |
| CTCAACACTGAAGGAGATGA+AGG | 0.520559 | 4.2:+32235436 | MS.gene006540:CDS |
| AGAAATTGAGGACACTTTGG+AGG | 0.527256 | 4.2:+32233526 | MS.gene006540:CDS |
| TGACACTGTTGAGCATAAAC+GGG | 0.527829 | 4.2:-32233916 | None:intergenic |
| ACCTGTGCACTTAAGGGTGA+TGG | 0.530294 | 4.2:+32235386 | MS.gene006540:CDS |
| TTGGAGGCCAAGAGAAATTG+AGG | 0.540924 | 4.2:+32233514 | MS.gene006540:CDS |
| AAGGGTGATGGCCTTTATGA+GGG | 0.543901 | 4.2:+32235398 | MS.gene006540:CDS |
| CTTCATCTCCTTCAGTGTTG+AGG | 0.544907 | 4.2:-32235435 | None:intergenic |
| GCCATCACCCTTAAGTGCAC+AGG | 0.550998 | 4.2:-32235387 | None:intergenic |
| GAGAGGAGCGATGACGGCAA+GGG | 0.553248 | 4.2:+32235304 | MS.gene006540:intron |
| CTTCGGCAATACCGAGATGC+GGG | 0.555246 | 4.2:+32232285 | MS.gene006540:CDS |
| AGAGAGGAGCGATGACGGCA+AGG | 0.563849 | 4.2:+32235303 | MS.gene006540:intron |
| TTTCTAGAGAGGAGCGATGA+CGG | 0.572515 | 4.2:+32235298 | MS.gene006540:intron |
| CTGGTTGTCCTCAACACTGA+AGG | 0.574863 | 4.2:+32235427 | MS.gene006540:CDS |
| AATAGAAAATGGCACATACA+AGG | 0.575931 | 4.2:+32235362 | MS.gene006540:CDS |
| AAAGTTGATTACCCGCATCT+CGG | 0.580109 | 4.2:-32232296 | None:intergenic |
| GGATACTCTTCATTAGGACT+AGG | 0.607922 | 4.2:+32235464 | MS.gene006540:CDS |
| ACTTGCCAACAAGCAAGACC+TGG | 0.613906 | 4.2:+32233946 | MS.gene006540:CDS |
| ATATTGTACAAGCTTCACAT+TGG | 0.619894 | 4.2:+32232958 | MS.gene006540:CDS |
| ACGGCAAGGGAAGTGTGTGA+CGG | 0.660211 | 4.2:+32235317 | MS.gene006540:CDS |
| TCTTCGGCAATACCGAGATG+CGG | 0.663090 | 4.2:+32232284 | MS.gene006540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTACATAATCAATTTT+TGG | - | chr4.2:32232433-32232452 | None:intergenic | 10.0% |
| !! | AAATAAAAATAAATCTACTC+TGG | + | chr4.2:32232603-32232622 | MS.gene006540:intron | 15.0% |
| !! | AATATTCATTATTTACTTAC+TGG | + | chr4.2:32234434-32234453 | MS.gene006540:intron | 15.0% |
| !! | ATTTAAATAGCTGTAATATA+TGG | + | chr4.2:32234168-32234187 | MS.gene006540:intron | 15.0% |
| !! | GAATTTCTAATTATATTATG+AGG | - | chr4.2:32234880-32234899 | None:intergenic | 15.0% |
| !!! | AGAATTAATTTTGACAAATT+TGG | - | chr4.2:32232634-32232653 | None:intergenic | 15.0% |
| !!! | TGATTATGTAAAATTGATTT+CGG | + | chr4.2:32232438-32232457 | MS.gene006540:intron | 15.0% |
| !!! | TTCTTTTTTTCTTTCAAATT+TGG | + | chr4.2:32232886-32232905 | MS.gene006540:intron | 15.0% |
| !! | AATATGTCAAATTTCATCAA+TGG | + | chr4.2:32235132-32235151 | MS.gene006540:intron | 20.0% |
| !! | AATTGTATTGCAAATATATG+TGG | + | chr4.2:32233312-32233331 | MS.gene006540:intron | 20.0% |
| !! | ATAAGAATAATTGTAGCAAA+AGG | - | chr4.2:32233657-32233676 | None:intergenic | 20.0% |
| !! | ATTGATGAAATTTGACATAT+TGG | - | chr4.2:32235133-32235152 | None:intergenic | 20.0% |
| !! | CAATTATTCTTATATCCTAT+AGG | + | chr4.2:32233664-32233683 | MS.gene006540:intron | 20.0% |
| !! | TTGATCTAAAGAATAGAAAA+TGG | + | chr4.2:32235351-32235370 | MS.gene006540:CDS | 20.0% |
| !! | TTGATGAAATTTGACATATT+GGG | - | chr4.2:32235132-32235151 | None:intergenic | 20.0% |
| !!! | AGAACTTTTTTAAGCAAAAA+CGG | + | chr4.2:32234920-32234939 | MS.gene006540:intron | 20.0% |
| !!! | CTATGAAACTTTTTTTTTGA+TGG | + | chr4.2:32233243-32233262 | MS.gene006540:intron | 20.0% |
| !!! | GTATAAGAATGTTATTTTCA+CGG | + | chr4.2:32233482-32233501 | MS.gene006540:CDS | 20.0% |
| ! | AAGATTTGAAAAACATACAC+GGG | - | chr4.2:32234840-32234859 | None:intergenic | 25.0% |
| ! | AATGCTAATAAAGTTGTGTT+TGG | + | chr4.2:32233098-32233117 | MS.gene006540:intron | 25.0% |
| ! | ACAACATATACAAATAGTGA+AGG | - | chr4.2:32234473-32234492 | None:intergenic | 25.0% |
| ! | AGAAAGCTACATTAACAATT+TGG | - | chr4.2:32232707-32232726 | None:intergenic | 25.0% |
| ! | AGCAGAACGAAAATTATAAT+TGG | + | chr4.2:32233383-32233402 | MS.gene006540:intron | 25.0% |
| ! | ATATATGGAATATGGTTCAA+AGG | + | chr4.2:32234183-32234202 | MS.gene006540:intron | 25.0% |
| ! | ATTATTATGTAAAAGTGAGC+TGG | + | chr4.2:32232502-32232521 | MS.gene006540:intron | 25.0% |
| ! | ATTTGCAATACAATTACAGA+GGG | - | chr4.2:32233307-32233326 | None:intergenic | 25.0% |
| ! | CAAGATTTGAAAAACATACA+CGG | - | chr4.2:32234841-32234860 | None:intergenic | 25.0% |
| ! | GATTACATAAAGAATTCAAG+TGG | - | chr4.2:32235067-32235086 | None:intergenic | 25.0% |
| ! | GGATATACATAATCATACAA+AGG | - | chr4.2:32235186-32235205 | None:intergenic | 25.0% |
| ! | TAGCTGTAATATATGGAATA+TGG | + | chr4.2:32234175-32234194 | MS.gene006540:intron | 25.0% |
| ! | TATTTGCAATACAATTACAG+AGG | - | chr4.2:32233308-32233327 | None:intergenic | 25.0% |
| ! | TCAAACTTGAAGCTAAAAAT+TGG | - | chr4.2:32232571-32232590 | None:intergenic | 25.0% |
| ! | TTACTCATATCAATGATTAG+TGG | + | chr4.2:32232384-32232403 | MS.gene006540:intron | 25.0% |
| ! | TTGCAGTTATAGCTAAATTA+AGG | - | chr4.2:32235263-32235282 | None:intergenic | 25.0% |
| ! | TTTCTGTTGTCTAAGTTAAA+GGG | + | chr4.2:32234612-32234631 | MS.gene006540:intron | 25.0% |
| ! | TTTGTATATGTTGTCATTGT+TGG | + | chr4.2:32234479-32234498 | MS.gene006540:intron | 25.0% |
| !! | TGAATATTTTCAACTGTACT+TGG | - | chr4.2:32234422-32234441 | None:intergenic | 25.0% |
| !!! | AAGGGAAGAAAACTTATTTT+AGG | + | chr4.2:32234630-32234649 | MS.gene006540:intron | 25.0% |
| !!! | GTATGTTTTTCAAATCTTGA+GGG | + | chr4.2:32234842-32234861 | MS.gene006540:intron | 25.0% |
| !!! | GTGTTAATTTGTAAGCTTTT+GGG | - | chr4.2:32233821-32233840 | None:intergenic | 25.0% |
| !!! | TGGAGTTTTAATGTATGTTT+GGG | + | chr4.2:32232404-32232423 | MS.gene006540:intron | 25.0% |
| !!! | TGTATGTTTTTCAAATCTTG+AGG | + | chr4.2:32234841-32234860 | MS.gene006540:intron | 25.0% |
| !!! | TGTGTTAATTTGTAAGCTTT+TGG | - | chr4.2:32233822-32233841 | None:intergenic | 25.0% |
| !!! | TTTTTCTTTCAAATTTGGTG+TGG | + | chr4.2:32232891-32232910 | MS.gene006540:intron | 25.0% |
| AAAAACAGAAAACTGCAAGA+CGG | - | chr4.2:32234318-32234337 | None:intergenic | 30.0% | |
| AAATAAAACCCACCAATTGT+AGG | - | chr4.2:32233003-32233022 | None:intergenic | 30.0% | |
| AATAGAAAATGGCACATACA+AGG | + | chr4.2:32235362-32235381 | MS.gene006540:CDS | 30.0% | |
| ACTGGTATGTGCATTAATTA+TGG | - | chr4.2:32234115-32234134 | None:intergenic | 30.0% | |
| AGCAATAATTCGATTATGTC+GGG | + | chr4.2:32232735-32232754 | MS.gene006540:intron | 30.0% | |
| AGCTAAATTAAGGCAAACTT+AGG | - | chr4.2:32235253-32235272 | None:intergenic | 30.0% | |
| AGTAAGCTAGTTAATTGAAG+AGG | - | chr4.2:32235230-32235249 | None:intergenic | 30.0% | |
| ATAGAACATCAGAATTCATG+AGG | - | chr4.2:32233227-32233246 | None:intergenic | 30.0% | |
| ATATTGTACAAGCTTCACAT+TGG | + | chr4.2:32232958-32232977 | MS.gene006540:CDS | 30.0% | |
| CAAAGTCAAATCATGTGAAT+TGG | + | chr4.2:32234047-32234066 | MS.gene006540:intron | 30.0% | |
| CAGCAATAATTCGATTATGT+CGG | + | chr4.2:32232734-32232753 | MS.gene006540:intron | 30.0% | |
| CTTTCTGTTGTCTAAGTTAA+AGG | + | chr4.2:32234611-32234630 | MS.gene006540:intron | 30.0% | |
| GTATTGCAAATATATGTGGT+GGG | + | chr4.2:32233316-32233335 | MS.gene006540:intron | 30.0% | |
| TAAGTTATAGGTCATTCAGA+TGG | - | chr4.2:32234003-32234022 | None:intergenic | 30.0% | |
| TAGAACATCAGAATTCATGA+GGG | - | chr4.2:32233226-32233245 | None:intergenic | 30.0% | |
| TATAAGTTTGTATGCATTGC+AGG | + | chr4.2:32233438-32233457 | MS.gene006540:intron | 30.0% | |
| TCTTTACACGTGTAAGTTAT+AGG | - | chr4.2:32234015-32234034 | None:intergenic | 30.0% | |
| TGTATTGCAAATATATGTGG+TGG | + | chr4.2:32233315-32233334 | MS.gene006540:intron | 30.0% | |
| TGTTTAAATATGCTTGTGAG+TGG | + | chr4.2:32233187-32233206 | MS.gene006540:intron | 30.0% | |
| TTATCTACTGTTCCTACAAT+TGG | + | chr4.2:32232988-32233007 | MS.gene006540:CDS | 30.0% | |
| TTTCTTTCCTCTTATAATGC+TGG | + | chr4.2:32234213-32234232 | MS.gene006540:intron | 30.0% | |
| TTTGCAATACAATTACAGAG+GGG | - | chr4.2:32233306-32233325 | None:intergenic | 30.0% | |
| ! | AAAACACAACTTGTGTCATT+TGG | + | chr4.2:32233617-32233636 | MS.gene006540:intron | 30.0% |
| ! | ACTAGTATCAAGACTTTTTG+TGG | - | chr4.2:32234975-32234994 | None:intergenic | 30.0% |
| ! | ATCTAACCAGTGTTGTTAAA+TGG | + | chr4.2:32234656-32234675 | MS.gene006540:intron | 30.0% |
| ! | ATGCTTGCTAATTATCTACT+TGG | + | chr4.2:32233148-32233167 | MS.gene006540:intron | 30.0% |
| ! | TCTAACCAGTGTTGTTAAAT+GGG | + | chr4.2:32234657-32234676 | MS.gene006540:intron | 30.0% |
| ! | TTTTAACAACACAGATGGTT+TGG | + | chr4.2:32233554-32233573 | MS.gene006540:CDS | 30.0% |
| !! | GATATATGTTGTTGATAGTC+TGG | + | chr4.2:32233749-32233768 | MS.gene006540:intron | 30.0% |
| !! | GGAGTTTTAATGTATGTTTG+GGG | + | chr4.2:32232405-32232424 | MS.gene006540:intron | 30.0% |
| !! | GTGGAGTTTTAATGTATGTT+TGG | + | chr4.2:32232403-32232422 | MS.gene006540:intron | 30.0% |
| !! | TTTCAAATTTGGTGTGGTTT+AGG | + | chr4.2:32232897-32232916 | MS.gene006540:intron | 30.0% |
| !!! | AGAATGTTATTTTCACGGTT+TGG | + | chr4.2:32233487-32233506 | MS.gene006540:CDS | 30.0% |
| !!! | CACTATTTTAACAACACAGA+TGG | + | chr4.2:32233549-32233568 | MS.gene006540:CDS | 30.0% |
| !!! | GAATGTTATTTTCACGGTTT+GGG | + | chr4.2:32233488-32233507 | MS.gene006540:CDS | 30.0% |
| AAACTCTTCGATTCCTTCTT+CGG | + | chr4.2:32232268-32232287 | MS.gene006540:CDS | 35.0% | |
| AAGAGAAATTGAGGACACTT+TGG | + | chr4.2:32233523-32233542 | MS.gene006540:CDS | 35.0% | |
| ACCAGACTAATTACACAGAT+GGG | - | chr4.2:32234348-32234367 | None:intergenic | 35.0% | |
| ACCATAGACAATTTATGACG+GGG | + | chr4.2:32234728-32234747 | MS.gene006540:intron | 35.0% | |
| AGATCAATTCAAAGCCTGTT+TGG | - | chr4.2:32233867-32233886 | None:intergenic | 35.0% | |
| ATACCAGTGCAAACATTGAA+GGG | + | chr4.2:32234127-32234146 | MS.gene006540:intron | 35.0% | |
| ATGACACTGTTGAGCATAAA+CGG | - | chr4.2:32233920-32233939 | None:intergenic | 35.0% | |
| CACAACATGTTATTCCAAAC+AGG | + | chr4.2:32233850-32233869 | MS.gene006540:intron | 35.0% | |
| CACCATAGACAATTTATGAC+GGG | + | chr4.2:32234727-32234746 | MS.gene006540:intron | 35.0% | |
| CCACCATAGACAATTTATGA+CGG | + | chr4.2:32234726-32234745 | MS.gene006540:intron | 35.0% | |
| GACTGAAAAGTCAGGATATT+GGG | + | chr4.2:32233686-32233705 | MS.gene006540:intron | 35.0% | |
| GATATTGGGCTAATGTATCA+AGG | + | chr4.2:32233700-32233719 | MS.gene006540:intron | 35.0% | |
| GCAATAATTCGATTATGTCG+GGG | + | chr4.2:32232736-32232755 | MS.gene006540:intron | 35.0% | |
| GGAATATGGTTCAAAGGTTA+AGG | + | chr4.2:32234189-32234208 | MS.gene006540:intron | 35.0% | |
| GTAACAACCAGCATTATAAG+AGG | - | chr4.2:32234223-32234242 | None:intergenic | 35.0% | |
| TACCAGACTAATTACACAGA+TGG | - | chr4.2:32234349-32234368 | None:intergenic | 35.0% | |
| TTGAATGGATGCAAACATGA+TGG | + | chr4.2:32233349-32233368 | MS.gene006540:intron | 35.0% | |
| TTGCAATACAATTACAGAGG+GGG | - | chr4.2:32233305-32233324 | None:intergenic | 35.0% | |
| TTGTGGTCAAGCATAATGAT+GGG | - | chr4.2:32234958-32234977 | None:intergenic | 35.0% | |
| TTTGAAAAACATACACGGGT+TGG | - | chr4.2:32234836-32234855 | None:intergenic | 35.0% | |
| TTTGTGGTCAAGCATAATGA+TGG | - | chr4.2:32234959-32234978 | None:intergenic | 35.0% | |
| ! | AAAGTGTCCTCAATTTCTCT+TGG | - | chr4.2:32233524-32233543 | None:intergenic | 35.0% |
| ! | ACTGACTTAGAATGTTCACA+TGG | - | chr4.2:32234547-32234566 | None:intergenic | 35.0% |
| ! | TACTAGTGAGACTTGAGTTT+TGG | + | chr4.2:32234988-32235007 | MS.gene006540:intron | 35.0% |
| !! | ACAGGCTTTGAATTGATCTA+TGG | + | chr4.2:32233868-32233887 | MS.gene006540:intron | 35.0% |
| !! | ATGCAAACATGATGGTGTTT+TGG | + | chr4.2:32233357-32233376 | MS.gene006540:intron | 35.0% |
| !! | TGTTTTTCAAATCTTGAGGG+AGG | + | chr4.2:32234845-32234864 | MS.gene006540:intron | 35.0% |
| !! | TTTCCTCTTCTTTTCTAGAG+AGG | + | chr4.2:32235287-32235306 | MS.gene006540:intron | 35.0% |
| AATTCGATTATGTCGGGGTT+GGG | + | chr4.2:32232741-32232760 | MS.gene006540:intron | 40.0% | |
| ACACAAGTGACACAATCTGT+TGG | - | chr4.2:32234521-32234540 | None:intergenic | 40.0% | |
| ACCCATCTGTGTAATTAGTC+TGG | + | chr4.2:32234344-32234363 | MS.gene006540:intron | 40.0% | |
| AGAAATTGAGGACACTTTGG+AGG | + | chr4.2:32233526-32233545 | MS.gene006540:CDS | 40.0% | |
| AGTGATCAGCTAGCAATACA+AGG | - | chr4.2:32235207-32235226 | None:intergenic | 40.0% | |
| ATGGTCCCATTTAACAACAC+TGG | - | chr4.2:32234665-32234684 | None:intergenic | 40.0% | |
| CAGATCAAGATACACATACC+AGG | - | chr4.2:32233967-32233986 | None:intergenic | 40.0% | |
| CATACCAGTGCAAACATTGA+AGG | + | chr4.2:32234126-32234145 | MS.gene006540:intron | 40.0% | |
| CCATAGACAATTTATGACGG+GGG | + | chr4.2:32234729-32234748 | MS.gene006540:intron | 40.0% | |
| CCGTCATAAATTGTCTATGG+TGG | - | chr4.2:32234729-32234748 | None:intergenic | 40.0% | |
| CCTCAAAGCTTAAACAACAG+TGG | - | chr4.2:32233416-32233435 | None:intergenic | 40.0% | |
| CTACTGTTCCTACAATTGGT+GGG | + | chr4.2:32232992-32233011 | MS.gene006540:intron | 40.0% | |
| GAAAGCAAAGCAGGAATTTC+AGG | + | chr4.2:32233788-32233807 | MS.gene006540:CDS | 40.0% | |
| GATAAGGAGTTGGAGATTCA+AGG | + | chr4.2:32232788-32232807 | MS.gene006540:intron | 40.0% | |
| GGACTGAAAAGTCAGGATAT+TGG | + | chr4.2:32233685-32233704 | MS.gene006540:intron | 40.0% | |
| GGATACTCTTCATTAGGACT+AGG | + | chr4.2:32235464-32235483 | MS.gene006540:CDS | 40.0% | |
| GTGGGTTTCTGTGAATTGAA+TGG | + | chr4.2:32233334-32233353 | MS.gene006540:intron | 40.0% | |
| TAATCTTTCCCACATGATCG+TGG | + | chr4.2:32235082-32235101 | MS.gene006540:intron | 40.0% | |
| TAATTCGATTATGTCGGGGT+TGG | + | chr4.2:32232740-32232759 | MS.gene006540:intron | 40.0% | |
| TACCAGTGCAAACATTGAAG+GGG | + | chr4.2:32234128-32234147 | MS.gene006540:intron | 40.0% | |
| TATGCTCAACAGTGTCATCT+TGG | + | chr4.2:32233922-32233941 | MS.gene006540:CDS | 40.0% | |
| TCCTATAGGACTGAAAAGTC+AGG | + | chr4.2:32233678-32233697 | MS.gene006540:intron | 40.0% | |
| TCTACTGTTCCTACAATTGG+TGG | + | chr4.2:32232991-32233010 | MS.gene006540:intron | 40.0% | |
| TGAACTAAGGGATAAGGAGT+TGG | + | chr4.2:32232778-32232797 | MS.gene006540:intron | 40.0% | |
| TGACACTGTTGAGCATAAAC+GGG | - | chr4.2:32233919-32233938 | None:intergenic | 40.0% | |
| TTGCTTTCCCAATTCTCTCA+CGG | - | chr4.2:32233776-32233795 | None:intergenic | 40.0% | |
| ! | AAAGTTGATTACCCGCATCT+CGG | - | chr4.2:32232299-32232318 | None:intergenic | 40.0% |
| ! | AGTGTTGTTAAATGGGACCA+TGG | + | chr4.2:32234664-32234683 | MS.gene006540:intron | 40.0% |
| ! | CCACTGTTGTTTAAGCTTTG+AGG | + | chr4.2:32233413-32233432 | MS.gene006540:intron | 40.0% |
| ! | CTGGTTTGAACTAAGGGATA+AGG | + | chr4.2:32232772-32232791 | MS.gene006540:intron | 40.0% |
| ! | TCAACTGTACTTGGTTCTTG+TGG | - | chr4.2:32234413-32234432 | None:intergenic | 40.0% |
| ! | TCCTGACTTTTCAGTCCTAT+AGG | - | chr4.2:32233682-32233701 | None:intergenic | 40.0% |
| !! | AGCTCAACTGGTTTGAACTA+AGG | + | chr4.2:32232765-32232784 | MS.gene006540:intron | 40.0% |
| !! | ATTTTCACGGTTTGGGATGT+TGG | + | chr4.2:32233495-32233514 | MS.gene006540:CDS | 40.0% |
| !! | GCTCAACTGGTTTGAACTAA+GGG | + | chr4.2:32232766-32232785 | MS.gene006540:intron | 40.0% |
| !! | GTGCTTATATGGTGGATGTT+TGG | + | chr4.2:32234785-32234804 | MS.gene006540:intron | 40.0% |
| !! | TAGTGAGACTTGAGTTTTGG+TGG | + | chr4.2:32234991-32235010 | MS.gene006540:intron | 40.0% |
| ACATACCAGGTCTTGCTTGT+TGG | - | chr4.2:32233954-32233973 | None:intergenic | 45.0% | |
| ACCAGTCCAAACCCTCATAA+AGG | - | chr4.2:32235412-32235431 | None:intergenic | 45.0% | |
| AGTCATGAACCACGATCATG+TGG | - | chr4.2:32235094-32235113 | None:intergenic | 45.0% | |
| AGTGCAAACATTGAAGGGGT+AGG | + | chr4.2:32234132-32234151 | MS.gene006540:intron | 45.0% | |
| CCCCCGTCATAAATTGTCTA+TGG | - | chr4.2:32234732-32234751 | None:intergenic | 45.0% | |
| CTCAACACTGAAGGAGATGA+AGG | + | chr4.2:32235436-32235455 | MS.gene006540:CDS | 45.0% | |
| CTTCATCTCCTTCAGTGTTG+AGG | - | chr4.2:32235438-32235457 | None:intergenic | 45.0% | |
| GAGAATTGGGAAAGCAAAGC+AGG | + | chr4.2:32233779-32233798 | MS.gene006540:CDS | 45.0% | |
| GCTGCTGGATACTCTTCATT+AGG | + | chr4.2:32235458-32235477 | MS.gene006540:CDS | 45.0% | |
| GTCATGAACCACGATCATGT+GGG | - | chr4.2:32235093-32235112 | None:intergenic | 45.0% | |
| TACCCCTTCAATGTTTGCAC+TGG | - | chr4.2:32234133-32234152 | None:intergenic | 45.0% | |
| TGATGGCCTTTATGAGGGTT+TGG | + | chr4.2:32235403-32235422 | MS.gene006540:CDS | 45.0% | |
| TTGGAGGCCAAGAGAAATTG+AGG | + | chr4.2:32233514-32233533 | MS.gene006540:CDS | 45.0% | |
| ! | AAGGGTGATGGCCTTTATGA+GGG | + | chr4.2:32235398-32235417 | MS.gene006540:CDS | 45.0% |
| ! | CTGTACTTGGTTCTTGTGGT+TGG | - | chr4.2:32234409-32234428 | None:intergenic | 45.0% |
| ! | GCTCCTCTCTAGAAAAGAAG+AGG | - | chr4.2:32235293-32235312 | None:intergenic | 45.0% |
| ! | TAAGGGTGATGGCCTTTATG+AGG | + | chr4.2:32235397-32235416 | MS.gene006540:CDS | 45.0% |
| ! | TACTTGGTTCTTGTGGTTGG+TGG | - | chr4.2:32234406-32234425 | None:intergenic | 45.0% |
| ! | TTTCTAGAGAGGAGCGATGA+CGG | + | chr4.2:32235298-32235317 | MS.gene006540:intron | 45.0% |
| !! | CATACACGGGTTGGAATCAA+TGG | - | chr4.2:32234827-32234846 | None:intergenic | 45.0% |
| !! | GGAATCAATGGCGGATATGA+TGG | - | chr4.2:32234815-32234834 | None:intergenic | 45.0% |
| !! | GTGGTTTAGGTTGTCATGCT+TGG | + | chr4.2:32232910-32232929 | MS.gene006540:intron | 45.0% |
| !! | TCAATGGCGGATATGATGGA+AGG | - | chr4.2:32234811-32234830 | None:intergenic | 45.0% |
| !! | TCTTGTGGTTGGTGGTCTAT+TGG | - | chr4.2:32234398-32234417 | None:intergenic | 45.0% |
| ACCTGTGCACTTAAGGGTGA+TGG | + | chr4.2:32235386-32235405 | MS.gene006540:CDS | 50.0% | |
| ACTTGCCAACAAGCAAGACC+TGG | + | chr4.2:32233946-32233965 | MS.gene006540:CDS | 50.0% | |
| AGTCTGGACCGTGAGAGAAT+TGG | + | chr4.2:32233765-32233784 | MS.gene006540:CDS | 50.0% | |
| CATCTCGGTATTGCCGAAGA+AGG | - | chr4.2:32232284-32232303 | None:intergenic | 50.0% | |
| CTGGTTGTCCTCAACACTGA+AGG | + | chr4.2:32235427-32235446 | MS.gene006540:CDS | 50.0% | |
| GATACGCATGCACGTGCAAA+AGG | - | chr4.2:32234261-32234280 | None:intergenic | 50.0% | |
| GCAATGGCGTGCTTATATGG+TGG | + | chr4.2:32234777-32234796 | MS.gene006540:intron | 50.0% | |
| GCCTTTATGAGGGTTTGGAC+TGG | + | chr4.2:32235408-32235427 | MS.gene006540:CDS | 50.0% | |
| GCTGCAATGGCGTGCTTATA+TGG | + | chr4.2:32234774-32234793 | MS.gene006540:intron | 50.0% | |
| GTCTGGACCGTGAGAGAATT+GGG | + | chr4.2:32233766-32233785 | MS.gene006540:CDS | 50.0% | |
| TCTTCGGCAATACCGAGATG+CGG | + | chr4.2:32232284-32232303 | MS.gene006540:CDS | 50.0% | |
| ! | ACAAGGCACCTGTGCACTTA+AGG | + | chr4.2:32235379-32235398 | MS.gene006540:CDS | 50.0% |
| ! | CAAGGCACCTGTGCACTTAA+GGG | + | chr4.2:32235380-32235399 | MS.gene006540:CDS | 50.0% |
| ! | TTCACGGTTTGGGATGTTGG+AGG | + | chr4.2:32233498-32233517 | MS.gene006540:CDS | 50.0% |
| !! | ACACGGGTTGGAATCAATGG+CGG | - | chr4.2:32234824-32234843 | None:intergenic | 50.0% |
| !! | AGGGAAGTGTGTGACGGATT+AGG | + | chr4.2:32235323-32235342 | MS.gene006540:CDS | 50.0% |
| !! | ATGCTTGGTCTTGATGCTGC+TGG | + | chr4.2:32232925-32232944 | MS.gene006540:CDS | 50.0% |
| !! | TGGTTGGTGGTCTATTGGCA+GGG | - | chr4.2:32234393-32234412 | None:intergenic | 50.0% |
| !!! | GGAATGGCATGGCGGATTTT+TGG | + | chr4.2:32234699-32234718 | MS.gene006540:intron | 50.0% |
| AAGCACGCCATTGCAGCCTA+TGG | - | chr4.2:32234771-32234790 | None:intergenic | 55.0% | |
| CTGAAGGAGATGAAGGCTGC+TGG | + | chr4.2:32235443-32235462 | MS.gene006540:CDS | 55.0% | |
| CTTCGGCAATACCGAGATGC+GGG | + | chr4.2:32232285-32232304 | MS.gene006540:CDS | 55.0% | |
| GCCATCACCCTTAAGTGCAC+AGG | - | chr4.2:32235390-32235409 | None:intergenic | 55.0% | |
| GGCAACACCATAGGCTGCAA+TGG | + | chr4.2:32234761-32234780 | MS.gene006540:intron | 55.0% | |
| ! | ACGGCAAGGGAAGTGTGTGA+CGG | + | chr4.2:32235317-32235336 | MS.gene006540:CDS | 55.0% |
| ! | CATGCACGTGCAAAAGGTGC+AGG | - | chr4.2:32234255-32234274 | None:intergenic | 55.0% |
| !! | AGCCTATGGTGTTGCCATGC+GGG | - | chr4.2:32234757-32234776 | None:intergenic | 55.0% |
| !! | CAGCCTATGGTGTTGCCATG+CGG | - | chr4.2:32234758-32234777 | None:intergenic | 55.0% |
| !! | GGTTGGTGGTCTATTGGCAG+GGG | - | chr4.2:32234392-32234411 | None:intergenic | 55.0% |
| !! | GTGGTTGGTGGTCTATTGGC+AGG | - | chr4.2:32234394-32234413 | None:intergenic | 55.0% |
| TCGGGGTTGGGTAGCTCAAC+TGG | + | chr4.2:32232753-32232772 | MS.gene006540:intron | 60.0% | |
| TGCCCGCATGGCAACACCAT+AGG | + | chr4.2:32234752-32234771 | MS.gene006540:intron | 60.0% | |
| ! | AGAGAGGAGCGATGACGGCA+AGG | + | chr4.2:32235303-32235322 | MS.gene006540:intron | 60.0% |
| ! | GAGAGGAGCGATGACGGCAA+GGG | + | chr4.2:32235304-32235323 | MS.gene006540:intron | 60.0% |
| ATGGGACCATGGCGCTGCCA+TGG | + | chr4.2:32234675-32234694 | MS.gene006540:intron | 65.0% | |
| ATTCCGCCATGGCAGCGCCA+TGG | - | chr4.2:32234684-32234703 | None:intergenic | 65.0% | |
| TCCGCCATGCCATTCCGCCA+TGG | - | chr4.2:32234695-32234714 | None:intergenic | 65.0% | |
| ! | ATGGCGCTGCCATGGCGGAA+TGG | + | chr4.2:32234683-32234702 | MS.gene006540:intron | 65.0% |
| ! | GCCATGGCGGAATGGCATGG+CGG | + | chr4.2:32234691-32234710 | MS.gene006540:intron | 65.0% |
| ! | GCTGCCATGGCGGAATGGCA+TGG | + | chr4.2:32234688-32234707 | MS.gene006540:intron | 65.0% |
| !! | TTATGACGGGGGTGCCCGCA+TGG | + | chr4.2:32234740-32234759 | MS.gene006540:intron | 65.0% |
| GGACCATGGCGCTGCCATGG+CGG | + | chr4.2:32234678-32234697 | MS.gene006540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32232250 | 32235502 | 32232250 | ID=MS.gene006540 |
| chr4.2 | mRNA | 32232250 | 32235502 | 32232250 | ID=MS.gene006540.t1;Parent=MS.gene006540 |
| chr4.2 | exon | 32232250 | 32232306 | 32232250 | ID=MS.gene006540.t1.exon1;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32232250 | 32232306 | 32232250 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| chr4.2 | exon | 32232919 | 32233009 | 32232919 | ID=MS.gene006540.t1.exon2;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32232919 | 32233009 | 32232919 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| chr4.2 | exon | 32233460 | 32233575 | 32233460 | ID=MS.gene006540.t1.exon3;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32233460 | 32233575 | 32233460 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| chr4.2 | exon | 32233750 | 32233809 | 32233750 | ID=MS.gene006540.t1.exon4;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32233750 | 32233809 | 32233750 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| chr4.2 | exon | 32233902 | 32233967 | 32233902 | ID=MS.gene006540.t1.exon5;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32233902 | 32233967 | 32233902 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| chr4.2 | exon | 32235305 | 32235502 | 32235305 | ID=MS.gene006540.t1.exon6;Parent=MS.gene006540.t1 |
| chr4.2 | CDS | 32235305 | 32235502 | 32235305 | ID=cds.MS.gene006540.t1;Parent=MS.gene006540.t1 |
| Gene Sequence |
| Protein sequence |
