Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053011.t1 | XP_003618209.1 | 100 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 6.20E-98 | 366.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053011.t1 | Q06396 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.4e-100 | 365.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053011.t1 | A0A059AQR8 | 100.0 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 4.5e-98 | 366.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053011 | MS.gene82876 | 0.993967 | 1.47E-203 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053011.t1 | MTR_6g005820 | 100.000 | 181 | 0 | 0 | 1 | 181 | 1 | 181 | 2.22e-135 | 375 |
| MS.gene053011.t1 | MTR_5g034130 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.56e-135 | 374 |
| MS.gene053011.t1 | MTR_5g034125 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 9.56e-135 | 374 |
| MS.gene053011.t1 | MTR_7g109960 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 1.26e-134 | 374 |
| MS.gene053011.t1 | MTR_1g086480 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.71e-134 | 373 |
| MS.gene053011.t1 | MTR_5g016540 | 86.667 | 180 | 24 | 0 | 1 | 180 | 1 | 180 | 9.51e-120 | 336 |
| MS.gene053011.t1 | MTR_4g128910 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 1.03e-84 | 248 |
| MS.gene053011.t1 | MTR_5g007810 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 4.49e-83 | 244 |
| MS.gene053011.t1 | MTR_4g077640 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.94e-80 | 237 |
| MS.gene053011.t1 | MTR_5g007820 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 1.95e-75 | 224 |
| MS.gene053011.t1 | MTR_1g076550 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.30e-67 | 204 |
| MS.gene053011.t1 | MTR_5g007840 | 42.723 | 213 | 77 | 2 | 1 | 180 | 1 | 201 | 5.07e-57 | 178 |
| MS.gene053011.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 2.71e-50 | 160 |
| MS.gene053011.t1 | MTR_8g077540 | 49.091 | 165 | 81 | 3 | 18 | 180 | 43 | 206 | 5.19e-50 | 160 |
| MS.gene053011.t1 | MTR_2g022200 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 4.70e-37 | 127 |
| MS.gene053011.t1 | MTR_5g078090 | 34.091 | 176 | 113 | 2 | 1 | 173 | 1 | 176 | 8.97e-31 | 110 |
| MS.gene053011.t1 | MTR_5g015370 | 32.609 | 184 | 121 | 2 | 1 | 181 | 1 | 184 | 1.91e-30 | 110 |
| MS.gene053011.t1 | MTR_8g077540 | 51.020 | 98 | 46 | 2 | 18 | 114 | 17 | 113 | 1.57e-28 | 103 |
| MS.gene053011.t1 | MTR_4g026950 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 2.20e-26 | 99.0 |
| MS.gene053011.t1 | MTR_2g034640 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.08e-24 | 95.5 |
| MS.gene053011.t1 | MTR_7g112090 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 2.77e-24 | 94.4 |
| MS.gene053011.t1 | MTR_4g121860 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 7.71e-23 | 90.5 |
| MS.gene053011.t1 | MTR_1g062760 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.73e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053011.t1 | AT1G10630 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 3.03e-134 | 373 |
| MS.gene053011.t1 | AT1G10630 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 3.03e-134 | 373 |
| MS.gene053011.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 4.17e-134 | 372 |
| MS.gene053011.t1 | AT5G14670 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 4.17e-134 | 372 |
| MS.gene053011.t1 | AT2G47170 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.54e-134 | 372 |
| MS.gene053011.t1 | AT2G47170 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.54e-134 | 372 |
| MS.gene053011.t1 | AT2G47170 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 7.54e-134 | 372 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G23490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT1G70490 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 2.07e-133 | 370 |
| MS.gene053011.t1 | AT5G14670 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.69e-133 | 370 |
| MS.gene053011.t1 | AT3G62290 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.20e-132 | 369 |
| MS.gene053011.t1 | AT3G62290 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.20e-132 | 369 |
| MS.gene053011.t1 | AT3G62290 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 1.20e-132 | 369 |
| MS.gene053011.t1 | AT2G15310 | 66.851 | 181 | 60 | 0 | 1 | 181 | 1 | 181 | 2.03e-90 | 263 |
| MS.gene053011.t1 | AT2G24765 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 3.95e-85 | 249 |
| MS.gene053011.t1 | AT3G03120 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 3.72e-81 | 239 |
| MS.gene053011.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.76e-81 | 239 |
| MS.gene053011.t1 | AT5G17060 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.76e-81 | 239 |
| MS.gene053011.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.16e-70 | 212 |
| MS.gene053011.t1 | AT3G22950 | 53.039 | 181 | 85 | 0 | 1 | 181 | 1 | 181 | 1.16e-70 | 212 |
| MS.gene053011.t1 | AT2G24765 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.09e-60 | 185 |
| MS.gene053011.t1 | AT3G03120 | 63.077 | 130 | 48 | 0 | 1 | 130 | 1 | 130 | 4.49e-60 | 183 |
| MS.gene053011.t1 | AT1G02430 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 9.60e-57 | 177 |
| MS.gene053011.t1 | AT1G02440 | 46.237 | 186 | 90 | 4 | 1 | 176 | 1 | 186 | 6.92e-56 | 175 |
| MS.gene053011.t1 | AT2G18390 | 49.091 | 165 | 81 | 3 | 18 | 180 | 17 | 180 | 1.12e-49 | 159 |
| MS.gene053011.t1 | AT1G02430 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 5.14e-45 | 146 |
| MS.gene053011.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.87e-36 | 124 |
| MS.gene053011.t1 | AT5G52210 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 6.87e-36 | 124 |
| MS.gene053011.t1 | AT3G49870 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 1.10e-32 | 115 |
| MS.gene053011.t1 | AT5G67560 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 2.39e-31 | 112 |
| MS.gene053011.t1 | AT5G37680 | 32.955 | 176 | 115 | 2 | 1 | 173 | 1 | 176 | 4.88e-30 | 108 |
| MS.gene053011.t1 | AT3G49870 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 1.88e-29 | 107 |
| MS.gene053011.t1 | AT3G49860 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 7.25e-29 | 105 |
| MS.gene053011.t1 | AT1G02440 | 33.766 | 154 | 66 | 3 | 1 | 153 | 1 | 119 | 1.02e-26 | 98.6 |
| MS.gene053011.t1 | AT1G09180 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 3.25e-25 | 96.7 |
| MS.gene053011.t1 | AT3G62560 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.30e-24 | 95.1 |
| MS.gene053011.t1 | AT5G37680 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 4.18e-24 | 92.4 |
| MS.gene053011.t1 | AT1G56330 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 5.00e-24 | 93.6 |
| MS.gene053011.t1 | AT4G02080 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 5.22e-24 | 93.6 |
Find 45 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATAAGACCCTGGGTGTTC+TGG | 0.268231 | 6.2:-1572253 | None:intergenic |
| CAGAGCACTTGTGCAACTTC+TGG | 0.283751 | 6.2:+1573309 | MS.gene053011:CDS |
| AGAGGGTCTTTATGAGGGTT+TGG | 0.332698 | 6.2:+1573332 | MS.gene053011:CDS |
| GCTTCACCGTGTGGGATGTC+GGG | 0.356155 | 6.2:+1571663 | MS.gene053011:CDS |
| CAGTAGGTTGTTTGCGAAGA+AGG | 0.366217 | 6.2:+1569454 | MS.gene053011:CDS |
| TCTGCAGCATTCATTGCATT+TGG | 0.388382 | 6.2:-1572963 | None:intergenic |
| AGCTTCACCGTGTGGGATGT+CGG | 0.397098 | 6.2:+1571662 | MS.gene053011:CDS |
| TTCTGGAGAGGGTCTTTATG+AGG | 0.405541 | 6.2:+1573326 | MS.gene053011:CDS |
| GTCTTTATGAGGGTTTGGAC+TGG | 0.477919 | 6.2:+1573337 | MS.gene053011:CDS |
| ATTCTCTCCGCCAACGCCAC+TGG | 0.484693 | 6.2:+1573009 | MS.gene053011:CDS |
| CTTCACCGTGTGGGATGTCG+GGG | 0.486668 | 6.2:+1571664 | MS.gene053011:CDS |
| GGAAGTAATGCCTCCACAAT+GGG | 0.487329 | 6.2:-1572232 | None:intergenic |
| TTCTAACAACATTGCAAGCA+AGG | 0.487356 | 6.2:+1573362 | MS.gene053011:CDS |
| ATTTGGAAGATCTTGTTTGT+TGG | 0.492492 | 6.2:-1572946 | None:intergenic |
| CTTCATACCAGTGGCGTTGG+CGG | 0.492667 | 6.2:-1573016 | None:intergenic |
| AGACCGAGTGGTTGAGGCAA+GGG | 0.502924 | 6.2:+1572298 | MS.gene053011:CDS |
| TGATAGAGACCGAGTGGTTG+AGG | 0.512695 | 6.2:+1572292 | MS.gene053011:CDS |
| CGTTCACGAAGCTGTTCAGT+AGG | 0.541353 | 6.2:+1569438 | MS.gene053011:CDS |
| GTTACTACCATCCCTACCAT+TGG | 0.542784 | 6.2:+1569554 | MS.gene053011:CDS |
| ATGGTAGGTCTCGATGCGGC+TGG | 0.552532 | 6.2:+1569491 | MS.gene053011:CDS |
| GCAGAAATAACTGACAAACT+TGG | 0.552853 | 6.2:+1572981 | MS.gene053011:CDS |
| TCTGGAGAGGGTCTTTATGA+GGG | 0.558851 | 6.2:+1573327 | MS.gene053011:CDS |
| CATCCCTTGCCTCAACCACT+CGG | 0.565995 | 6.2:-1572301 | None:intergenic |
| GATCTTCATACCAGTGGCGT+TGG | 0.567883 | 6.2:-1573019 | None:intergenic |
| ATCTGCAGATCCGCCCATTG+TGG | 0.576990 | 6.2:+1572219 | MS.gene053011:intron |
| GCTGATGTTCTTGTACTCCA+CGG | 0.581443 | 6.2:-1571642 | None:intergenic |
| AGGCAAGGGATGAATTGCAC+AGG | 0.586704 | 6.2:+1572312 | MS.gene053011:CDS |
| GTATTGAACTAACCAATGGT+AGG | 0.587944 | 6.2:-1569566 | None:intergenic |
| TGCAGATCCGCCCATTGTGG+AGG | 0.589244 | 6.2:+1572222 | MS.gene053011:intron |
| TATTGAACTAACCAATGGTA+GGG | 0.589286 | 6.2:-1569565 | None:intergenic |
| GAACTAACCAATGGTAGGGA+TGG | 0.590928 | 6.2:-1569561 | None:intergenic |
| TGGAAGTAATGCCTCCACAA+TGG | 0.593003 | 6.2:-1572233 | None:intergenic |
| GAGACCGAGTGGTTGAGGCA+AGG | 0.594397 | 6.2:+1572297 | MS.gene053011:CDS |
| CACTTGTGCAACTTCTGGAG+AGG | 0.598038 | 6.2:+1573314 | MS.gene053011:CDS |
| ACTTGTGCAACTTCTGGAGA+GGG | 0.603681 | 6.2:+1573315 | MS.gene053011:CDS |
| AGTAATGCCTCCACAATGGG+CGG | 0.622929 | 6.2:-1572229 | None:intergenic |
| AGGATTTAATGTTGAAACCG+TGG | 0.626322 | 6.2:+1571625 | MS.gene053011:intron |
| GAACATCAGCTTCACCGTGT+GGG | 0.628419 | 6.2:+1571655 | MS.gene053011:CDS |
| CATTACTTCCAGAACACCCA+GGG | 0.648785 | 6.2:+1572245 | MS.gene053011:CDS |
| TTCACCGTGTGGGATGTCGG+GGG | 0.658294 | 6.2:+1571665 | MS.gene053011:CDS |
| AGAACATCAGCTTCACCGTG+TGG | 0.663793 | 6.2:+1571654 | MS.gene053011:CDS |
| GCATTACTTCCAGAACACCC+AGG | 0.681110 | 6.2:+1572244 | MS.gene053011:CDS |
| ATTGCACAGGATGTTGAATG+AGG | 0.696400 | 6.2:+1572325 | MS.gene053011:CDS |
| TTTGATGGTAGGTCTCGATG+CGG | 0.707868 | 6.2:+1569487 | MS.gene053011:CDS |
| TAGCAATGATAGAGACCGAG+TGG | 0.713240 | 6.2:+1572286 | MS.gene053011:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGATAATTAAAATAAT+TGG | + | chr6.2:1569809-1569828 | MS.gene053011:intron | 10.0% |
| !! | GTATATATCTATATAATAAT+TGG | + | chr6.2:1571585-1571604 | MS.gene053011:intron | 10.0% |
| !!! | AAAATATATTACTTTGTTTT+CGG | + | chr6.2:1572449-1572468 | MS.gene053011:intron | 10.0% |
| !!! | AACAATAATTTTTTTCAATT+GGG | + | chr6.2:1570349-1570368 | MS.gene053011:intron | 10.0% |
| !!! | TATGATTAGTTATTAATAAA+TGG | + | chr6.2:1571175-1571194 | MS.gene053011:intron | 10.0% |
| !! | AAAATGTTAAATCATAATTG+AGG | - | chr6.2:1573106-1573125 | None:intergenic | 15.0% |
| !! | ATATTGGAAATATATAATGT+TGG | + | chr6.2:1572858-1572877 | MS.gene053011:intron | 15.0% |
| !! | ATCTACATAATTATAACATA+AGG | - | chr6.2:1569720-1569739 | None:intergenic | 15.0% |
| !! | ATGTATTATTTGTATATATG+AGG | + | chr6.2:1573639-1573658 | MS.gene053011:intron | 15.0% |
| !! | TAAAAATCAATATTGAGAAA+GGG | - | chr6.2:1569591-1569610 | None:intergenic | 15.0% |
| !! | TATTAATAACTAATCATAAG+TGG | - | chr6.2:1571173-1571192 | None:intergenic | 15.0% |
| !! | TTACCATTATACATAATTAA+AGG | + | chr6.2:1572807-1572826 | MS.gene053011:intron | 15.0% |
| !!! | AAATATATTACTTTGTTTTC+GGG | + | chr6.2:1572450-1572469 | MS.gene053011:intron | 15.0% |
| !!! | ACAAAGTAATATATTTTTAG+AGG | - | chr6.2:1572446-1572465 | None:intergenic | 15.0% |
| !!! | GAACAATAATTTTTTTCAAT+TGG | + | chr6.2:1570348-1570367 | MS.gene053011:intron | 15.0% |
| !!! | TCACATCATATTTAATTTAA+TGG | - | chr6.2:1569927-1569946 | None:intergenic | 15.0% |
| !!! | TCTTTTATATAATACTATCT+TGG | + | chr6.2:1573125-1573144 | MS.gene053011:intron | 15.0% |
| !! | AAAAGAGATGTAAAATAGTT+AGG | + | chr6.2:1570259-1570278 | MS.gene053011:intron | 20.0% |
| !! | AAAGAGATGTAAAATAGTTA+GGG | + | chr6.2:1570260-1570279 | MS.gene053011:intron | 20.0% |
| !! | ATAAATCCAAGTTGTATAAA+CGG | - | chr6.2:1571201-1571220 | None:intergenic | 20.0% |
| !! | ATACTATAACATCTTCTAAA+TGG | - | chr6.2:1570526-1570545 | None:intergenic | 20.0% |
| !! | ATTGTATTATAAGTATGCAA+AGG | + | chr6.2:1573514-1573533 | MS.gene053011:intron | 20.0% |
| !! | GTAAAAATCAATATTGAGAA+AGG | - | chr6.2:1569592-1569611 | None:intergenic | 20.0% |
| !! | GTTAAAATTCAGAAATTTGA+AGG | - | chr6.2:1571284-1571303 | None:intergenic | 20.0% |
| !! | TAAAATAGTTAGGGATATAT+TGG | + | chr6.2:1570269-1570288 | MS.gene053011:intron | 20.0% |
| !! | TAAAGTTGTTAGATAAAGAT+CGG | - | chr6.2:1571352-1571371 | None:intergenic | 20.0% |
| !! | TTATATAATACTATCTTGGA+GGG | + | chr6.2:1573129-1573148 | MS.gene053011:intron | 20.0% |
| !! | TTTATATAATACTATCTTGG+AGG | + | chr6.2:1573128-1573147 | MS.gene053011:intron | 20.0% |
| !!! | AATTATTTTTGCTAGTTTTC+TGG | - | chr6.2:1572572-1572591 | None:intergenic | 20.0% |
| !!! | ACACTTTTTTCAATATAATG+AGG | + | chr6.2:1572181-1572200 | MS.gene053011:intron | 20.0% |
| !!! | ATCTCAATGATAAATTTTAC+AGG | - | chr6.2:1569754-1569773 | None:intergenic | 20.0% |
| !!! | ATTATTTTTGCTAGTTTTCT+GGG | - | chr6.2:1572571-1572590 | None:intergenic | 20.0% |
| !!! | ATTCCATTACAATGTTTTTT+GGG | + | chr6.2:1572153-1572172 | MS.gene053011:intron | 20.0% |
| !!! | ATTTTGTATAAATTGAAGCT+TGG | + | chr6.2:1569524-1569543 | MS.gene053011:CDS | 20.0% |
| !!! | CACTTTTTTCAATATAATGA+GGG | + | chr6.2:1572182-1572201 | MS.gene053011:intron | 20.0% |
| !!! | TATTCCATTACAATGTTTTT+TGG | + | chr6.2:1572152-1572171 | MS.gene053011:intron | 20.0% |
| !!! | TATTTATGCATGTTTGTTAA+AGG | + | chr6.2:1570399-1570418 | MS.gene053011:intron | 20.0% |
| !!! | TGGAATAATTTTTTATCTAC+AGG | + | chr6.2:1571605-1571624 | MS.gene053011:intron | 20.0% |
| !!! | TTTAAAGATCTAAAACAAAC+AGG | - | chr6.2:1570041-1570060 | None:intergenic | 20.0% |
| !!! | TTTTATTGTAGGTATGTTTT+TGG | + | chr6.2:1572669-1572688 | MS.gene053011:intron | 20.0% |
| ! | AAACCCAAAAAACATTGTAA+TGG | - | chr6.2:1572159-1572178 | None:intergenic | 25.0% |
| ! | AACAAAATATTCACACTCAT+AGG | + | chr6.2:1569775-1569794 | MS.gene053011:intron | 25.0% |
| ! | AAGGAGAAATGTAATATGTA+AGG | + | chr6.2:1573541-1573560 | MS.gene053011:intron | 25.0% |
| ! | AATAAAAGACGTAGGTAAAA+AGG | + | chr6.2:1571893-1571912 | MS.gene053011:intron | 25.0% |
| ! | AATAATTGGTCGTTGTATTA+AGG | + | chr6.2:1569823-1569842 | MS.gene053011:intron | 25.0% |
| ! | AATGTACATATGTCATCTTA+TGG | + | chr6.2:1571560-1571579 | MS.gene053011:intron | 25.0% |
| ! | ACATACCTACAATAAAATCT+TGG | - | chr6.2:1572666-1572685 | None:intergenic | 25.0% |
| ! | ATAAAAGACGTAGGTAAAAA+GGG | + | chr6.2:1571894-1571913 | MS.gene053011:intron | 25.0% |
| ! | ATAAGTATGCAAAGGTTAAA+AGG | + | chr6.2:1573522-1573541 | MS.gene053011:intron | 25.0% |
| ! | ATATATCAATCCATTATGCA+GGG | - | chr6.2:1570468-1570487 | None:intergenic | 25.0% |
| ! | ATTATGTAGATGATACTAGT+TGG | + | chr6.2:1573429-1573448 | MS.gene053011:intron | 25.0% |
| ! | ATTCATAGTTTCACACTATA+TGG | + | chr6.2:1572721-1572740 | MS.gene053011:intron | 25.0% |
| ! | CAGCCTTTAATTATGTATAA+TGG | - | chr6.2:1572813-1572832 | None:intergenic | 25.0% |
| ! | CATAACTAAAACGTCAAAAA+TGG | - | chr6.2:1570066-1570085 | None:intergenic | 25.0% |
| ! | GAAATCTAGAAATTGTGAAT+TGG | + | chr6.2:1571477-1571496 | MS.gene053011:intron | 25.0% |
| ! | TACATTAGAAACACAATTTG+TGG | - | chr6.2:1571546-1571565 | None:intergenic | 25.0% |
| ! | TATACAACTTGGATTTATCA+TGG | + | chr6.2:1571203-1571222 | MS.gene053011:intron | 25.0% |
| ! | TATCATGGTAATAAAACTAC+TGG | + | chr6.2:1571218-1571237 | MS.gene053011:intron | 25.0% |
| ! | TCATACAAGATAAACAACAA+AGG | - | chr6.2:1572375-1572394 | None:intergenic | 25.0% |
| ! | TCTTCTAAATGGAGAAATAA+AGG | - | chr6.2:1570515-1570534 | None:intergenic | 25.0% |
| ! | TGAGTTACAATAAAAAAGGT+AGG | - | chr6.2:1573672-1573691 | None:intergenic | 25.0% |
| ! | TGTGTAAGATATTCACAAAT+TGG | + | chr6.2:1570090-1570109 | MS.gene053011:intron | 25.0% |
| ! | TTGTATTAAGGCAAATTCTA+TGG | + | chr6.2:1569835-1569854 | MS.gene053011:intron | 25.0% |
| !! | AGTGATAGTCTTAAGTATAT+TGG | + | chr6.2:1572842-1572861 | MS.gene053011:intron | 25.0% |
| !! | ATCAACCAAGATTTTATTGT+AGG | + | chr6.2:1572658-1572677 | MS.gene053011:intron | 25.0% |
| !! | GTTTTATATAACAGTCAATG+TGG | + | chr6.2:1570963-1570982 | MS.gene053011:intron | 25.0% |
| !! | TCACAATTTCTAGATTTCAA+TGG | - | chr6.2:1571475-1571494 | None:intergenic | 25.0% |
| !!! | TACCTTTTTTATTGTAACTC+AGG | + | chr6.2:1573671-1573690 | MS.gene053011:intron | 25.0% |
| !!! | TATGTTTTTGGTGTTCTTAA+TGG | + | chr6.2:1572681-1572700 | MS.gene053011:intron | 25.0% |
| AAACAAACAGGCCTTTAATA+TGG | - | chr6.2:1570029-1570048 | None:intergenic | 30.0% | |
| AACAAACAGGCCTTTAATAT+GGG | - | chr6.2:1570028-1570047 | None:intergenic | 30.0% | |
| AGCAACTCTATAGACTTAAT+GGG | + | chr6.2:1572618-1572637 | MS.gene053011:intron | 30.0% | |
| ATTTGAAGGATGTTTATCTC+AGG | - | chr6.2:1571270-1571289 | None:intergenic | 30.0% | |
| ATTTGTTCCAGAAAAACAAG+AGG | - | chr6.2:1573496-1573515 | None:intergenic | 30.0% | |
| CACAAATTTATTTCCACCAT+TGG | + | chr6.2:1569887-1569906 | MS.gene053011:intron | 30.0% | |
| CATAGTGTTAGAAGAAGAAA+GGG | + | chr6.2:1570835-1570854 | MS.gene053011:intron | 30.0% | |
| CATATATCAATCCATTATGC+AGG | - | chr6.2:1570469-1570488 | None:intergenic | 30.0% | |
| GTTTGAATAGGAAAAGAAGA+TGG | - | chr6.2:1570735-1570754 | None:intergenic | 30.0% | |
| TAAAAGACGTAGGTAAAAAG+GGG | + | chr6.2:1571895-1571914 | MS.gene053011:intron | 30.0% | |
| TAGCAACTCTATAGACTTAA+TGG | + | chr6.2:1572617-1572636 | MS.gene053011:intron | 30.0% | |
| TATACAAGCTTCCATAATGT+GGG | + | chr6.2:1571806-1571825 | MS.gene053011:intron | 30.0% | |
| TATATAACAAACATCTGCAG+AGG | - | chr6.2:1572766-1572785 | None:intergenic | 30.0% | |
| TATATCAATCCATTATGCAG+GGG | - | chr6.2:1570467-1570486 | None:intergenic | 30.0% | |
| TATTGAACTAACCAATGGTA+GGG | - | chr6.2:1569568-1569587 | None:intergenic | 30.0% | |
| TCATAGTGTTAGAAGAAGAA+AGG | + | chr6.2:1570834-1570853 | MS.gene053011:intron | 30.0% | |
| TCCAGTCATTGCATTAAAAA+TGG | - | chr6.2:1573272-1573291 | None:intergenic | 30.0% | |
| TGCCTGAGTTACAATAAAAA+AGG | - | chr6.2:1573676-1573695 | None:intergenic | 30.0% | |
| TGTATTCTAAACGTGAACTT+AGG | + | chr6.2:1571314-1571333 | MS.gene053011:intron | 30.0% | |
| TTAGACAAAGCCCATATTAA+AGG | + | chr6.2:1570015-1570034 | MS.gene053011:intron | 30.0% | |
| TTCGAACATCGATCAAAATA+AGG | - | chr6.2:1572060-1572079 | None:intergenic | 30.0% | |
| TTTGAAGGATGTTTATCTCA+GGG | - | chr6.2:1571269-1571288 | None:intergenic | 30.0% | |
| ! | ACATTGTAATGGAATACACA+TGG | - | chr6.2:1572148-1572167 | None:intergenic | 30.0% |
| ! | ACTCTGTCACTTAATAATAG+TGG | - | chr6.2:1571869-1571888 | None:intergenic | 30.0% |
| ! | ATGGATTGATATATGAAAGC+TGG | + | chr6.2:1570474-1570493 | MS.gene053011:intron | 30.0% |
| ! | ATTTGGAAGATCTTGTTTGT+TGG | - | chr6.2:1572949-1572968 | None:intergenic | 30.0% |
| ! | CATTGTAATGGAATACACAT+GGG | - | chr6.2:1572147-1572166 | None:intergenic | 30.0% |
| ! | TCTCTTTTTGTTAGTAGCAA+TGG | - | chr6.2:1570247-1570266 | None:intergenic | 30.0% |
| ! | TTGCTACATCGTTTCATTTT+TGG | + | chr6.2:1572020-1572039 | MS.gene053011:intron | 30.0% |
| !! | GTAAAGAAAATGGGTTTTGA+TGG | - | chr6.2:1570772-1570791 | None:intergenic | 30.0% |
| !! | TCCATTTTAAAGATTGCGTT+GGG | + | chr6.2:1571115-1571134 | MS.gene053011:intron | 30.0% |
| !! | TCCATTTTTAATGCAATGAC+TGG | + | chr6.2:1573268-1573287 | MS.gene053011:intron | 30.0% |
| !! | TTCCATTTTAAAGATTGCGT+TGG | + | chr6.2:1571114-1571133 | MS.gene053011:intron | 30.0% |
| !! | TTCTTGCTGTCTCTTTTAAT+AGG | - | chr6.2:1570331-1570350 | None:intergenic | 30.0% |
| !!! | AATTTGACCCATTTTTCAAG+AGG | + | chr6.2:1570439-1570458 | MS.gene053011:intron | 30.0% |
| !!! | ATTTGACCCATTTTTCAAGA+GGG | + | chr6.2:1570440-1570459 | MS.gene053011:intron | 30.0% |
| AAAAGACGTAGGTAAAAAGG+GGG | + | chr6.2:1571896-1571915 | MS.gene053011:intron | 35.0% | |
| AAATGGCCGTTTATACAACT+TGG | + | chr6.2:1571192-1571211 | MS.gene053011:intron | 35.0% | |
| AACCACAAAAATAAGACCCT+GGG | - | chr6.2:1572264-1572283 | None:intergenic | 35.0% | |
| AAGTTGGCGGTAAAGAAAAT+GGG | - | chr6.2:1570781-1570800 | None:intergenic | 35.0% | |
| AATTAATCCCTGCTCTTGAA+TGG | - | chr6.2:1570216-1570235 | None:intergenic | 35.0% | |
| ACATGCAAAAGTAACTACGA+AGG | - | chr6.2:1572414-1572433 | None:intergenic | 35.0% | |
| AGATACTACTTTCATCCCTA+AGG | - | chr6.2:1571063-1571082 | None:intergenic | 35.0% | |
| AGGATTTAATGTTGAAACCG+TGG | + | chr6.2:1571625-1571644 | MS.gene053011:intron | 35.0% | |
| AGTCTATAGAGTTGCTATCA+AGG | - | chr6.2:1572614-1572633 | None:intergenic | 35.0% | |
| ATAATGTTGGTATGTGAACC+TGG | + | chr6.2:1572871-1572890 | MS.gene053011:intron | 35.0% | |
| CTATACAAGCTTCCATAATG+TGG | + | chr6.2:1571805-1571824 | MS.gene053011:intron | 35.0% | |
| CTGAAACAAAATTACCATCC+AGG | - | chr6.2:1572892-1572911 | None:intergenic | 35.0% | |
| CTTCTAACACTATGACTTCT+TGG | - | chr6.2:1570829-1570848 | None:intergenic | 35.0% | |
| GAGTGAAGAATAAAAGACGT+AGG | + | chr6.2:1571885-1571904 | MS.gene053011:intron | 35.0% | |
| GATTCAACGAGAGTTTGAAT+AGG | - | chr6.2:1570747-1570766 | None:intergenic | 35.0% | |
| GCAATGACTGGATTTATTTC+AGG | + | chr6.2:1573280-1573299 | MS.gene053011:intron | 35.0% | |
| GCAGAAATAACTGACAAACT+TGG | + | chr6.2:1572981-1573000 | MS.gene053011:CDS | 35.0% | |
| GTATTGAACTAACCAATGGT+AGG | - | chr6.2:1569569-1569588 | None:intergenic | 35.0% | |
| GTGAACTTAGGAATGTTAGT+TGG | + | chr6.2:1571326-1571345 | MS.gene053011:intron | 35.0% | |
| GTGACTTTATGATCAAATGC+TGG | + | chr6.2:1569943-1569962 | MS.gene053011:intron | 35.0% | |
| TGATACTTGTGCAATCATTG+TGG | - | chr6.2:1571384-1571403 | None:intergenic | 35.0% | |
| TGTCTATTATGCTTGTTTCC+TGG | + | chr6.2:1571715-1571734 | MS.gene053011:intron | 35.0% | |
| TTATGTACTGTGTATGACTG+TGG | + | chr6.2:1572106-1572125 | MS.gene053011:intron | 35.0% | |
| TTCTAACAACATTGCAAGCA+AGG | + | chr6.2:1573362-1573381 | MS.gene053011:CDS | 35.0% | |
| ! | ATCCTTGAACATTTGTTGCT+AGG | + | chr6.2:1570990-1571009 | MS.gene053011:intron | 35.0% |
| ! | ATGCTTGACAACACTTTTGT+TGG | + | chr6.2:1572503-1572522 | MS.gene053011:intron | 35.0% |
| ! | CAATTGGGTCTTGTGTTTAT+GGG | + | chr6.2:1570364-1570383 | MS.gene053011:intron | 35.0% |
| ! | CTCTTGGTGATTAGTTAATC+TGG | - | chr6.2:1573231-1573250 | None:intergenic | 35.0% |
| ! | GAAGGAGATGAGAATTTTGA+TGG | + | chr6.2:1569472-1569491 | MS.gene053011:CDS | 35.0% |
| ! | GCAATATGTCTTTTCTCTGT+TGG | - | chr6.2:1570663-1570682 | None:intergenic | 35.0% |
| ! | TAAGTTGGCGGTAAAGAAAA+TGG | - | chr6.2:1570782-1570801 | None:intergenic | 35.0% |
| ! | TCAATTGGGTCTTGTGTTTA+TGG | + | chr6.2:1570363-1570382 | MS.gene053011:intron | 35.0% |
| ! | TGCTTGACAACACTTTTGTT+GGG | + | chr6.2:1572504-1572523 | MS.gene053011:intron | 35.0% |
| ! | TTCACACTATATGGTTTGCA+CGG | + | chr6.2:1572730-1572749 | MS.gene053011:intron | 35.0% |
| !! | AAGGGTATTGAACTAACCAA+TGG | - | chr6.2:1569573-1569592 | None:intergenic | 35.0% |
| !! | AGTTGGATGATTTGTTCACT+TGG | + | chr6.2:1573446-1573465 | MS.gene053011:intron | 35.0% |
| !! | CCATTTTAAAGATTGCGTTG+GGG | + | chr6.2:1571116-1571135 | MS.gene053011:intron | 35.0% |
| !! | CTGGATGGTAATTTTGTTTC+AGG | + | chr6.2:1572890-1572909 | MS.gene053011:intron | 35.0% |
| !! | GAGATGAGAATTTTGATGGT+AGG | + | chr6.2:1569476-1569495 | MS.gene053011:CDS | 35.0% |
| !!! | GTGTTTTTTGTTTGCGTTTC+AGG | + | chr6.2:1571423-1571442 | MS.gene053011:intron | 35.0% |
| AAAAACAAGAGGATGGAGAG+TGG | - | chr6.2:1573485-1573504 | None:intergenic | 40.0% | |
| AACAAACATCTGCAGAGGAA+GGG | - | chr6.2:1572761-1572780 | None:intergenic | 40.0% | |
| AAGTTTGCCATTCAAGAGCA+GGG | + | chr6.2:1570206-1570225 | MS.gene053011:intron | 40.0% | |
| ACCATGTACAAGATACTACC+CGG | - | chr6.2:1570945-1570964 | None:intergenic | 40.0% | |
| ACCTCTGTAACAGATATGGT+TGG | - | chr6.2:1570695-1570714 | None:intergenic | 40.0% | |
| AGAAGATGGCCGTGATATAA+TGG | - | chr6.2:1570721-1570740 | None:intergenic | 40.0% | |
| AGAGGTGAGCCATTATATCA+CGG | + | chr6.2:1570709-1570728 | MS.gene053011:intron | 40.0% | |
| AGATCAGATCTTCATACCAG+TGG | - | chr6.2:1573028-1573047 | None:intergenic | 40.0% | |
| ATTGCACAGGATGTTGAATG+AGG | + | chr6.2:1572325-1572344 | MS.gene053011:CDS | 40.0% | |
| CAACCACAAAAATAAGACCC+TGG | - | chr6.2:1572265-1572284 | None:intergenic | 40.0% | |
| CAAGTTCCCAACACATAAGT+TGG | - | chr6.2:1570797-1570816 | None:intergenic | 40.0% | |
| CCCTAAGGATCATTGATCTA+CGG | - | chr6.2:1571048-1571067 | None:intergenic | 40.0% | |
| CCGTAGATCAATGATCCTTA+GGG | + | chr6.2:1571045-1571064 | MS.gene053011:intron | 40.0% | |
| CTCCTAGCAACAAATGTTCA+AGG | - | chr6.2:1570995-1571014 | None:intergenic | 40.0% | |
| CTGTAACAGATATGGTTGGA+CGG | - | chr6.2:1570691-1570710 | None:intergenic | 40.0% | |
| CTTGTGTTTATGGGTGGTAA+AGG | + | chr6.2:1570373-1570392 | MS.gene053011:intron | 40.0% | |
| GAGATTCATTGATCCAATGG+TGG | - | chr6.2:1569903-1569922 | None:intergenic | 40.0% | |
| GGTGAGATTCATTGATCCAA+TGG | - | chr6.2:1569906-1569925 | None:intergenic | 40.0% | |
| GTTCCAGAAAAACAAGAGGA+TGG | - | chr6.2:1573492-1573511 | None:intergenic | 40.0% | |
| TAACAAACATCTGCAGAGGA+AGG | - | chr6.2:1572762-1572781 | None:intergenic | 40.0% | |
| TCCAACCATATCTGTTACAG+AGG | + | chr6.2:1570691-1570710 | MS.gene053011:intron | 40.0% | |
| TCCGTAGATCAATGATCCTT+AGG | + | chr6.2:1571044-1571063 | MS.gene053011:intron | 40.0% | |
| TCTGCAGCATTCATTGCATT+TGG | - | chr6.2:1572966-1572985 | None:intergenic | 40.0% | |
| TTACCGCCAACTTATGTGTT+GGG | + | chr6.2:1570788-1570807 | MS.gene053011:intron | 40.0% | |
| TTTACCGCCAACTTATGTGT+TGG | + | chr6.2:1570787-1570806 | MS.gene053011:intron | 40.0% | |
| ! | ATTTTAGACACCAGCTGAAC+CGG | + | chr6.2:1570923-1570942 | MS.gene053011:intron | 40.0% |
| ! | CCCCAACGCAATCTTTAAAA+TGG | - | chr6.2:1571119-1571138 | None:intergenic | 40.0% |
| ! | CTTGACAACACTTTTGTTGG+GGG | + | chr6.2:1572506-1572525 | MS.gene053011:intron | 40.0% |
| ! | GCTTGACAACACTTTTGTTG+GGG | + | chr6.2:1572505-1572524 | MS.gene053011:intron | 40.0% |
| ! | TTGGTTGTTGTTGTTGTGGA+GGG | + | chr6.2:1573186-1573205 | MS.gene053011:intron | 40.0% |
| !!! | TCTCCATCCTCTTGTTTTTC+TGG | + | chr6.2:1573486-1573505 | MS.gene053011:intron | 40.0% |
| AAATAAGACCCTGGGTGTTC+TGG | - | chr6.2:1572256-1572275 | None:intergenic | 45.0% | |
| AACAAAGACACCACCTGACA+CGG | - | chr6.2:1569676-1569695 | None:intergenic | 45.0% | |
| AATCACCAAGAGACGTGCAT+GGG | + | chr6.2:1573239-1573258 | MS.gene053011:intron | 45.0% | |
| ACCGGGTAGTATCTTGTACA+TGG | + | chr6.2:1570941-1570960 | MS.gene053011:intron | 45.0% | |
| AGAGGGTCTTTATGAGGGTT+TGG | + | chr6.2:1573332-1573351 | MS.gene053011:CDS | 45.0% | |
| AGGGGACCCTCTTGAAAAAT+GGG | - | chr6.2:1570449-1570468 | None:intergenic | 45.0% | |
| CAAGTTTGCCATTCAAGAGC+AGG | + | chr6.2:1570205-1570224 | MS.gene053011:intron | 45.0% | |
| CAGTAGGTTGTTTGCGAAGA+AGG | + | chr6.2:1569454-1569473 | MS.gene053011:CDS | 45.0% | |
| CATTACTTCCAGAACACCCA+GGG | + | chr6.2:1572245-1572264 | MS.gene053011:CDS | 45.0% | |
| GAACTAACCAATGGTAGGGA+TGG | - | chr6.2:1569564-1569583 | None:intergenic | 45.0% | |
| GAGCTAGTAGAGGTCATGTA+TGG | + | chr6.2:1571745-1571764 | MS.gene053011:intron | 45.0% | |
| GCTCACCTCTGTAACAGATA+TGG | - | chr6.2:1570699-1570718 | None:intergenic | 45.0% | |
| GCTGATGTTCTTGTACTCCA+CGG | - | chr6.2:1571645-1571664 | None:intergenic | 45.0% | |
| GGAAGTAATGCCTCCACAAT+GGG | - | chr6.2:1572235-1572254 | None:intergenic | 45.0% | |
| GGTGCAACAATCCCACATTA+TGG | - | chr6.2:1571820-1571839 | None:intergenic | 45.0% | |
| GTCTTTATGAGGGTTTGGAC+TGG | + | chr6.2:1573337-1573356 | MS.gene053011:CDS | 45.0% | |
| GTTACTACCATCCCTACCAT+TGG | + | chr6.2:1569554-1569573 | MS.gene053011:CDS | 45.0% | |
| TAATCACCAAGAGACGTGCA+TGG | + | chr6.2:1573238-1573257 | MS.gene053011:intron | 45.0% | |
| TAGCAATGATAGAGACCGAG+TGG | + | chr6.2:1572286-1572305 | MS.gene053011:CDS | 45.0% | |
| TCACATAACACACAGCATGC+AGG | - | chr6.2:1571841-1571860 | None:intergenic | 45.0% | |
| TCTGGAGAGGGTCTTTATGA+GGG | + | chr6.2:1573327-1573346 | MS.gene053011:CDS | 45.0% | |
| TGGAAGTAATGCCTCCACAA+TGG | - | chr6.2:1572236-1572255 | None:intergenic | 45.0% | |
| TGTCGTGTCAATGTCATGTC+AGG | + | chr6.2:1569629-1569648 | MS.gene053011:intron | 45.0% | |
| TGTTGGTATGTGAACCTGGA+TGG | + | chr6.2:1572875-1572894 | MS.gene053011:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr6.2:1573168-1573187 | None:intergenic | 45.0% |
| ! | ACTTGTGCAACTTCTGGAGA+GGG | + | chr6.2:1573315-1573334 | MS.gene053011:CDS | 45.0% |
| ! | AGGCTTGGTTGTTGTTGTTG+TGG | + | chr6.2:1573182-1573201 | MS.gene053011:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr6.2:1573169-1573188 | None:intergenic | 45.0% |
| ! | CTTGGTTGTTGTTGTTGTGG+AGG | + | chr6.2:1573185-1573204 | MS.gene053011:intron | 45.0% |
| ! | GTTCCCAACACATAAGTTGG+CGG | - | chr6.2:1570794-1570813 | None:intergenic | 45.0% |
| ! | TTCTGGAGAGGGTCTTTATG+AGG | + | chr6.2:1573326-1573345 | MS.gene053011:CDS | 45.0% |
| ! | TTGGGTCTTGTGTTTATGGG+TGG | + | chr6.2:1570367-1570386 | MS.gene053011:intron | 45.0% |
| ! | TTTGATGGTAGGTCTCGATG+CGG | + | chr6.2:1569487-1569506 | MS.gene053011:CDS | 45.0% |
| ! | TTTTAGACACCAGCTGAACC+GGG | + | chr6.2:1570924-1570943 | MS.gene053011:intron | 45.0% |
| !! | GAGAGTGTCAAAGAGAGTGA+CGG | + | chr6.2:1571012-1571031 | MS.gene053011:intron | 45.0% |
| !! | GCGAGTGGATTGTCGTATAT+AGG | + | chr6.2:1571925-1571944 | MS.gene053011:intron | 45.0% |
| !!! | CACCCAGGGTCTTATTTTTG+TGG | + | chr6.2:1572259-1572278 | MS.gene053011:CDS | 45.0% |
| AAGATACTACCCGGTTCAGC+TGG | - | chr6.2:1570936-1570955 | None:intergenic | 50.0% | |
| AGAACATCAGCTTCACCGTG+TGG | + | chr6.2:1571654-1571673 | MS.gene053011:CDS | 50.0% | |
| AGGCAAGGGATGAATTGCAC+AGG | + | chr6.2:1572312-1572331 | MS.gene053011:CDS | 50.0% | |
| AGTAATGCCTCCACAATGGG+CGG | - | chr6.2:1572232-1572251 | None:intergenic | 50.0% | |
| AGTGTCAAAGAGAGTGACGG+TGG | + | chr6.2:1571015-1571034 | MS.gene053011:intron | 50.0% | |
| CAGATATGGTTGGACGGTGA+TGG | - | chr6.2:1570685-1570704 | None:intergenic | 50.0% | |
| CAGGGGACCCTCTTGAAAAA+TGG | - | chr6.2:1570450-1570469 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr6.2:1573167-1573186 | MS.gene053011:intron | 50.0% | |
| CGTTCACGAAGCTGTTCAGT+AGG | + | chr6.2:1569438-1569457 | MS.gene053011:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr6.2:1573164-1573183 | None:intergenic | 50.0% | |
| GAACATCAGCTTCACCGTGT+GGG | + | chr6.2:1571655-1571674 | MS.gene053011:CDS | 50.0% | |
| GATCTTCATACCAGTGGCGT+TGG | - | chr6.2:1573022-1573041 | None:intergenic | 50.0% | |
| GCATTACTTCCAGAACACCC+AGG | + | chr6.2:1572244-1572263 | MS.gene053011:CDS | 50.0% | |
| TCATGTCAAGTGTCCGTGTC+AGG | + | chr6.2:1569660-1569679 | MS.gene053011:intron | 50.0% | |
| TGATAGAGACCGAGTGGTTG+AGG | + | chr6.2:1572292-1572311 | MS.gene053011:CDS | 50.0% | |
| TGGTGACAGAGAGCTAGTAG+AGG | + | chr6.2:1571735-1571754 | MS.gene053011:intron | 50.0% | |
| ! | CACTTGTGCAACTTCTGGAG+AGG | + | chr6.2:1573314-1573333 | MS.gene053011:CDS | 50.0% |
| ! | CAGAGCACTTGTGCAACTTC+TGG | + | chr6.2:1573309-1573328 | MS.gene053011:CDS | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr6.2:1573170-1573189 | None:intergenic | 50.0% |
| ! | TCTACTAGCTCTCTGTCACC+AGG | - | chr6.2:1571736-1571755 | None:intergenic | 50.0% |
| AAAAGGGGGAGAGTAGCGAG+TGG | + | chr6.2:1571910-1571929 | MS.gene053011:intron | 55.0% | |
| AGACCGAGTGGTTGAGGCAA+GGG | + | chr6.2:1572298-1572317 | MS.gene053011:CDS | 55.0% | |
| AGCTTCACCGTGTGGGATGT+CGG | + | chr6.2:1571662-1571681 | MS.gene053011:CDS | 55.0% | |
| ATCTGCAGATCCGCCCATTG+TGG | + | chr6.2:1572219-1572238 | MS.gene053011:intron | 55.0% | |
| CAAGAGGGTCCCCTGCATAA+TGG | + | chr6.2:1570455-1570474 | MS.gene053011:intron | 55.0% | |
| CATCCCTTGCCTCAACCACT+CGG | - | chr6.2:1572304-1572323 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr6.2:1573162-1573181 | MS.gene053011:intron | 55.0% | |
| GTTCACCCATGCACGTCTCT+TGG | - | chr6.2:1573247-1573266 | None:intergenic | 55.0% | |
| TGTCAAGTGTCCGTGTCAGG+TGG | + | chr6.2:1569663-1569682 | MS.gene053011:intron | 55.0% | |
| ! | CTTCATACCAGTGGCGTTGG+CGG | - | chr6.2:1573019-1573038 | None:intergenic | 55.0% |
| ! | TTGCGTTGGGGTGTCATGAC+AGG | + | chr6.2:1571128-1571147 | MS.gene053011:intron | 55.0% |
| ! | TTGTGCCGACCCCACTTAGT+GGG | + | chr6.2:1573156-1573175 | MS.gene053011:intron | 55.0% |
| ! | TTTGTGCCGACCCCACTTAG+TGG | + | chr6.2:1573155-1573174 | MS.gene053011:intron | 55.0% |
| ATGGTAGGTCTCGATGCGGC+TGG | + | chr6.2:1569491-1569510 | MS.gene053011:CDS | 60.0% | |
| ATTCTCTCCGCCAACGCCAC+TGG | + | chr6.2:1573009-1573028 | MS.gene053011:CDS | 60.0% | |
| CTTCACCGTGTGGGATGTCG+GGG | + | chr6.2:1571664-1571683 | MS.gene053011:CDS | 60.0% | |
| GAGACCGAGTGGTTGAGGCA+AGG | + | chr6.2:1572297-1572316 | MS.gene053011:CDS | 60.0% | |
| GCTTCACCGTGTGGGATGTC+GGG | + | chr6.2:1571663-1571682 | MS.gene053011:CDS | 60.0% | |
| TGCAGATCCGCCCATTGTGG+AGG | + | chr6.2:1572222-1572241 | MS.gene053011:intron | 60.0% | |
| TTCACCGTGTGGGATGTCGG+GGG | + | chr6.2:1571665-1571684 | MS.gene053011:CDS | 60.0% | |
| CTGACCCCCGACATCCCACA+CGG | - | chr6.2:1571672-1571691 | None:intergenic | 65.0% | |
| GGATGTCGGGGGTCAGGACA+AGG | + | chr6.2:1571676-1571695 | MS.gene053011:CDS | 65.0% | |
| CGTGTGGGATGTCGGGGGTC+AGG | + | chr6.2:1571670-1571689 | MS.gene053011:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 1569428 | 1573698 | 1569428 | ID=MS.gene053011 |
| chr6.2 | mRNA | 1569428 | 1573698 | 1569428 | ID=MS.gene053011.t1;Parent=MS.gene053011 |
| chr6.2 | exon | 1569428 | 1569575 | 1569428 | ID=MS.gene053011.t1.exon1;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1569428 | 1569575 | 1569428 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| chr6.2 | exon | 1571627 | 1571697 | 1571627 | ID=MS.gene053011.t1.exon2;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1571627 | 1571697 | 1571627 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| chr6.2 | exon | 1572227 | 1572346 | 1572227 | ID=MS.gene053011.t1.exon3;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1572227 | 1572346 | 1572227 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| chr6.2 | exon | 1572912 | 1573030 | 1572912 | ID=MS.gene053011.t1.exon4;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1572912 | 1573030 | 1572912 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| chr6.2 | exon | 1573302 | 1573383 | 1573302 | ID=MS.gene053011.t1.exon5;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1573302 | 1573383 | 1573302 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| chr6.2 | exon | 1573693 | 1573698 | 1573693 | ID=MS.gene053011.t1.exon6;Parent=MS.gene053011.t1 |
| chr6.2 | CDS | 1573693 | 1573698 | 1573693 | ID=cds.MS.gene053011.t1;Parent=MS.gene053011.t1 |
| Gene Sequence |
| Protein sequence |
