Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06992.t1 | XP_003625917.1 | 92.3 | 868 | 64 | 2 | 1 | 868 | 1 | 865 | 0.00E+00 | 1340.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06992.t1 | P87137 | 26.7 | 754 | 435 | 17 | 151 | 849 | 236 | 926 | 1.6e-46 | 189.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06992.t1 | G7KRW4 | 92.3 | 868 | 64 | 2 | 1 | 868 | 1 | 865 | 0.0e+00 | 1340.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene06992 | 0.850921 | 1.24E-60 | -1.69E-46 |
| MS.gene049159 | MS.gene06992 | 0.810024 | 1.42E-50 | -1.69E-46 |
| MS.gene049350 | MS.gene06992 | 0.803349 | 3.64E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene06992 | 0.821752 | 3.42E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene06992 | 0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene06992 | 0.838914 | 2.17E-57 | -1.69E-46 |
| MS.gene050689 | MS.gene06992 | 0.853586 | 2.17E-61 | -1.69E-46 |
| MS.gene050838 | MS.gene06992 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene06992 | 0.843106 | 1.72E-58 | -1.69E-46 |
| MS.gene051343 | MS.gene06992 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene06992 | 0.841798 | 3.82E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene06992 | 0.821864 | 3.22E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene06992 | 0.828677 | 7.87E-55 | -1.69E-46 |
| MS.gene052397 | MS.gene06992 | 0.831632 | 1.50E-55 | -1.69E-46 |
| MS.gene052514 | MS.gene06992 | 0.800302 | 1.54E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene06992 | 0.814659 | 1.38E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene06992 | 0.850054 | 2.18E-60 | -1.69E-46 |
| MS.gene052611 | MS.gene06992 | 0.802804 | 4.71E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene06992 | 0.814034 | 1.89E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene06992 | 0.805546 | 1.27E-49 | -1.69E-46 |
| MS.gene05315 | MS.gene06992 | 0.805332 | 1.40E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene06992 | 0.843689 | 1.20E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene06992 | 0.809884 | 1.52E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene06992 | 0.805318 | 1.41E-49 | -1.69E-46 |
| MS.gene055311 | MS.gene06992 | 0.80851 | 2.99E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene06992 | 0.826386 | 2.79E-54 | -1.69E-46 |
| MS.gene055314 | MS.gene06992 | 0.800575 | 1.35E-48 | -1.69E-46 |
| MS.gene055465 | MS.gene06992 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene06992 | 0.820475 | 6.73E-53 | -1.69E-46 |
| MS.gene055512 | MS.gene06992 | 0.813888 | 2.04E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene06992 | 0.838043 | 3.64E-57 | -1.69E-46 |
| MS.gene056043 | MS.gene06992 | -0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene06992 | 0.823472 | 1.36E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene06992 | 0.824839 | 6.49E-54 | -1.69E-46 |
| MS.gene056403 | MS.gene06992 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene06992 | 0.834606 | 2.72E-56 | -1.69E-46 |
| MS.gene056553 | MS.gene06992 | 0.811035 | 8.56E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene06992 | 0.800155 | 1.65E-48 | -1.69E-46 |
| MS.gene057360 | MS.gene06992 | 0.841596 | 4.32E-58 | -1.69E-46 |
| MS.gene057446 | MS.gene06992 | 0.808777 | 2.62E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene06992 | 0.829839 | 4.11E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene06992 | 0.803254 | 3.81E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene06992 | 0.842507 | 2.48E-58 | -1.69E-46 |
| MS.gene058668 | MS.gene06992 | 0.804974 | 1.67E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene06992 | 0.802957 | 4.38E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene06992 | 0.802062 | 6.70E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene06992 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene06992 | 0.851363 | 9.32E-61 | -1.69E-46 |
| MS.gene060637 | MS.gene06992 | 0.827593 | 1.44E-54 | -1.69E-46 |
| MS.gene061006 | MS.gene06992 | 0.846807 | 1.72E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46486 | MS.gene06992 | PPI |
| MS.gene003693 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene015586 | PPI |
| MS.gene029825 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene063568 | PPI |
| MS.gene75013 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene50744 | PPI |
| MS.gene06992 | MS.gene072782 | PPI |
| MS.gene06992 | MS.gene39202 | PPI |
| MS.gene06992 | MS.gene48368 | PPI |
| MS.gene76511 | MS.gene06992 | PPI |
| MS.gene36329 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene002256 | PPI |
| MS.gene02213 | MS.gene06992 | PPI |
| MS.gene85127 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene053381 | PPI |
| MS.gene063209 | MS.gene06992 | PPI |
| MS.gene060830 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene56868 | PPI |
| MS.gene47800 | MS.gene06992 | PPI |
| MS.gene01229 | MS.gene06992 | PPI |
| MS.gene06992 | MS.gene65479 | PPI |
| MS.gene06992 | MS.gene019309 | PPI |
| MS.gene06992 | MS.gene033253 | PPI |
| MS.gene06992 | MS.gene23314 | PPI |
| MS.gene06992 | MS.gene034624 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06992.t1 | MTR_7g108730 | 93.318 | 898 | 52 | 3 | 1 | 898 | 1 | 890 | 0.0 | 1552 |
| MS.gene06992.t1 | MTR_3g113240 | 80.294 | 883 | 114 | 12 | 1 | 873 | 1 | 833 | 0.0 | 1290 |
| MS.gene06992.t1 | MTR_8g058740 | 92.219 | 347 | 27 | 0 | 146 | 492 | 23 | 369 | 0.0 | 606 |
| MS.gene06992.t1 | MTR_7g091790 | 51.624 | 585 | 208 | 20 | 1 | 578 | 1 | 517 | 4.99e-136 | 422 |
| MS.gene06992.t1 | MTR_7g091790 | 56.180 | 267 | 95 | 5 | 587 | 848 | 429 | 678 | 3.45e-81 | 276 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06992.t1 | AT4G02400 | 47.545 | 896 | 407 | 18 | 19 | 896 | 5 | 855 | 0.0 | 691 |
| MS.gene06992.t1 | AT5G08600 | 45.550 | 854 | 394 | 19 | 19 | 857 | 8 | 805 | 0.0 | 612 |
| MS.gene06992.t1 | AT5G08600 | 44.532 | 887 | 408 | 20 | 19 | 877 | 8 | 838 | 0.0 | 604 |
| MS.gene06992.t1 | AT5G08600 | 40.154 | 650 | 323 | 18 | 19 | 658 | 8 | 601 | 9.36e-113 | 359 |
Find 180 sgRNAs with CRISPR-Local
Find 400 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCCTATTTCTCTGAATA+AGG | 0.222756 | 7.3:-6226981 | None:intergenic |
| ATGAAAGTTCCCAGAGAAAA+AGG | 0.230480 | 7.3:+6230015 | MS.gene06992:CDS |
| CCATGTATCTGAGGCAAATA+TGG | 0.232475 | 7.3:-6229423 | None:intergenic |
| CCTCTGGCGTTCTTGTTTCA+TGG | 0.236132 | 7.3:-6228154 | None:intergenic |
| TTCTTTCTAGATTCTTCTTC+AGG | 0.247261 | 7.3:-6226238 | None:intergenic |
| ATTCCTCTCAAATTTAGTTC+TGG | 0.253669 | 7.3:-6227079 | None:intergenic |
| ACCAGTGGCAGAAGAGTATT+TGG | 0.256001 | 7.3:+6229044 | MS.gene06992:CDS |
| TATTATCAGCACCAATTGTT+TGG | 0.264258 | 7.3:-6229079 | None:intergenic |
| AACAATTGGTGCTGATAATA+AGG | 0.264486 | 7.3:+6229082 | MS.gene06992:CDS |
| ATTGACTCTGATGATGATTC+TGG | 0.264836 | 7.3:+6226459 | MS.gene06992:CDS |
| AGAAGTCTTCAAAATTTAAT+AGG | 0.268913 | 7.3:+6229598 | MS.gene06992:CDS |
| GAATAAATAATTACCATAAA+AGG | 0.270343 | 7.3:-6228581 | None:intergenic |
| AACCCCTTATTCAGAGAAAT+AGG | 0.271086 | 7.3:+6226977 | MS.gene06992:CDS |
| CCACTGGTAGATGCTACTTT+TGG | 0.288858 | 7.3:-6229029 | None:intergenic |
| GCCTTTGCTATCATTGCCTT+TGG | 0.300511 | 7.3:-6231727 | None:intergenic |
| CAATTTGTTGATTTCTTAAC+CGG | 0.305399 | 7.3:-6226849 | None:intergenic |
| GCCTCTATTACTTCCTGGTT+GGG | 0.307969 | 7.3:+6229935 | MS.gene06992:CDS |
| TACTTCCTGGTTGGGGTCAA+TGG | 0.313460 | 7.3:+6229943 | MS.gene06992:CDS |
| TGCCTCAGATACATGGAAAA+AGG | 0.332114 | 7.3:+6229430 | MS.gene06992:CDS |
| ACCTTTACATCGTGCCTAAC+AGG | 0.337743 | 7.3:-6229621 | None:intergenic |
| TTCCTCTCAAATTTAGTTCT+GGG | 0.338005 | 7.3:-6227078 | None:intergenic |
| GCATATTCATTAGCAGCTTC+AGG | 0.339373 | 7.3:-6228132 | None:intergenic |
| AGTTCATCATGACAAAATTA+TGG | 0.340220 | 7.3:+6227113 | MS.gene06992:CDS |
| CAAAATTTAATAGGCCTGTT+AGG | 0.341268 | 7.3:+6229607 | MS.gene06992:CDS |
| CTCCCTATTTCTCTGAATAA+GGG | 0.343945 | 7.3:-6226980 | None:intergenic |
| TAACAGACGATGATATGTTT+TGG | 0.345941 | 7.3:-6228064 | None:intergenic |
| GAGAAGCCTCTATTACTTCC+TGG | 0.348985 | 7.3:+6229930 | MS.gene06992:CDS |
| AAGACATCTTTGGAAGTATA+AGG | 0.349436 | 7.3:-6231247 | None:intergenic |
| ACGAGGAACTGACTAGAAAA+AGG | 0.357806 | 7.3:+6228384 | MS.gene06992:CDS |
| TCTAACCCGGCAACTACATT+TGG | 0.361095 | 7.3:+6231304 | MS.gene06992:CDS |
| AAAATCTTGTTTGCCTTATC+CGG | 0.361359 | 7.3:-6228482 | None:intergenic |
| GTAGTTGCCGGGTTAGATTC+AGG | 0.370277 | 7.3:-6231298 | None:intergenic |
| ATTATCAGCACCAATTGTTT+GGG | 0.370353 | 7.3:-6229078 | None:intergenic |
| GATCGTCACGAAGAGGATTA+AGG | 0.372975 | 7.3:-6226810 | None:intergenic |
| AGAATCCTCCAGCTTCTTCA+TGG | 0.403400 | 7.3:-6228991 | None:intergenic |
| ACCTTCGCTTGATCTGCCTT+TGG | 0.407519 | 7.3:-6226904 | None:intergenic |
| AGCATCCTTTCTCTTCTTGA+GGG | 0.407735 | 7.3:-6230045 | None:intergenic |
| CTTCATATTCTTGTACAGTA+AGG | 0.410508 | 7.3:-6228965 | None:intergenic |
| TATAAAACCGATAGAATTTG+AGG | 0.410968 | 7.3:+6231638 | MS.gene06992:CDS |
| AACTAAATTTGAGAGGAATA+TGG | 0.412942 | 7.3:+6227083 | MS.gene06992:CDS |
| CCATATTTGCCTCAGATACA+TGG | 0.414348 | 7.3:+6229423 | MS.gene06992:CDS |
| TCTTTCCTTTCGCTTCTTCT+CGG | 0.414401 | 7.3:-6226035 | None:intergenic |
| GACAATCAACGGAAGAAAAC+CGG | 0.418141 | 7.3:+6226109 | MS.gene06992:CDS |
| GAGGAAGAATGATGTTATTC+CGG | 0.419305 | 7.3:+6226711 | MS.gene06992:CDS |
| TGCTTGATAGGTTTCTATAA+AGG | 0.420322 | 7.3:+6227951 | MS.gene06992:intron |
| ACACTCTGTTGCCGCTGCTC+TGG | 0.420778 | 7.3:-6231681 | None:intergenic |
| AGAGGTCCAAATGTAGTTGC+CGG | 0.421778 | 7.3:-6231310 | None:intergenic |
| CATCTCAAGAGGAGCTCATT+CGG | 0.423337 | 7.3:+6229826 | MS.gene06992:CDS |
| GAGCATCCTTTCTCTTCTTG+AGG | 0.426017 | 7.3:-6230046 | None:intergenic |
| TGACCTTTCTTCTGATTTCG+AGG | 0.434404 | 7.3:+6226297 | MS.gene06992:CDS |
| TTATTATCATTGACAGAGAC+AGG | 0.436439 | 7.3:-6226274 | None:intergenic |
| TATTTATTCTTACCATCAAA+AGG | 0.437025 | 7.3:-6226543 | None:intergenic |
| TCGATTTCATCAACATCAAC+AGG | 0.444833 | 7.3:-6226184 | None:intergenic |
| GTTAAAGAAAGTTAGATTGA+AGG | 0.445755 | 7.3:+6228083 | MS.gene06992:CDS |
| CTACATTTGGACCTCTTACT+CGG | 0.449943 | 7.3:+6231317 | MS.gene06992:CDS |
| AGGATGTTACAACGAATTAC+CGG | 0.452496 | 7.3:+6226507 | MS.gene06992:CDS |
| GCTTGATCTGCCTTTGGAAG+TGG | 0.453063 | 7.3:-6226898 | None:intergenic |
| AGCCTCTATTACTTCCTGGT+TGG | 0.459722 | 7.3:+6229934 | MS.gene06992:CDS |
| ACTCTGATGAAAGACATCTT+TGG | 0.462745 | 7.3:-6231257 | None:intergenic |
| ATGGCTAAAGCCCAAACAAT+TGG | 0.467988 | 7.3:+6229068 | MS.gene06992:CDS |
| TGCTGATTCTGATCCGGATA+AGG | 0.468993 | 7.3:+6228469 | MS.gene06992:CDS |
| ATCACTGCTGCTACTGTCCA+TGG | 0.477773 | 7.3:-6228411 | None:intergenic |
| TTGACTCTGATGATGATTCT+GGG | 0.479242 | 7.3:+6226460 | MS.gene06992:CDS |
| GGAAGTAATAGAGGCTTCTC+AGG | 0.479287 | 7.3:-6229927 | None:intergenic |
| AGAGTCTTCTCAGTTGGAAA+TGG | 0.480279 | 7.3:+6228107 | MS.gene06992:CDS |
| TGAAGATTCCATGAAGAAGC+TGG | 0.480768 | 7.3:+6228983 | MS.gene06992:CDS |
| CGCTGCTCTGGTTTATCGTG+AGG | 0.482465 | 7.3:-6231669 | None:intergenic |
| TAAAGATAGCAATCCCGACT+TGG | 0.484286 | 7.3:-6228558 | None:intergenic |
| CCCCAACCAGGAAGTAATAG+AGG | 0.486131 | 7.3:-6229936 | None:intergenic |
| ACAAAAGACACTAGAAGTGC+TGG | 0.486241 | 7.3:+6228517 | MS.gene06992:CDS |
| ACCCCTTATTCAGAGAAATA+GGG | 0.486296 | 7.3:+6226978 | MS.gene06992:CDS |
| CAGGAGTAGGGTTTAAGTGT+TGG | 0.488532 | 7.3:-6226165 | None:intergenic |
| TCATCAACATCAACAGGAGT+AGG | 0.489154 | 7.3:-6226178 | None:intergenic |
| AAAAGAAAGGTTTACCATCC+TGG | 0.489615 | 7.3:+6229979 | MS.gene06992:CDS |
| TTCACTTCCTCAAATTCTAT+CGG | 0.489667 | 7.3:-6231645 | None:intergenic |
| GATGATGAAATGCCCAAGTC+GGG | 0.491051 | 7.3:+6228545 | MS.gene06992:CDS |
| CTTACTTCAGGCCGAGTAAG+AGG | 0.491319 | 7.3:-6231328 | None:intergenic |
| CAGAGTATGCGTATGCCCAT+TGG | 0.493073 | 7.3:+6231274 | MS.gene06992:CDS |
| AACCGGAGTCTTGAATGATC+AGG | 0.493279 | 7.3:-6226832 | None:intergenic |
| TGAGATGGAAGTTCATAAGA+TGG | 0.495179 | 7.3:-6229810 | None:intergenic |
| GCCTGTTAGGCACGATGTAA+AGG | 0.499377 | 7.3:+6229620 | MS.gene06992:CDS |
| GGCTCCGCAATTTAGCAGCC+TGG | 0.501451 | 7.3:-6227993 | None:intergenic |
| CGGGTTAGATTCAGGTCCAA+TGG | 0.503979 | 7.3:-6231290 | None:intergenic |
| GCAACGTGGTTTAGATAAGC+AGG | 0.506637 | 7.3:+6228319 | MS.gene06992:CDS |
| AATAGAGGCTTCTCAGGCTC+GGG | 0.507163 | 7.3:-6229921 | None:intergenic |
| TTCATGTTCTTTGACCATCC+AGG | 0.508099 | 7.3:-6229997 | None:intergenic |
| TTACCATCAAAAGGCTTGCT+CGG | 0.509507 | 7.3:-6226534 | None:intergenic |
| CCTCTATTACTTCCTGGTTG+GGG | 0.511255 | 7.3:+6229936 | MS.gene06992:CDS |
| AAGTGGCAACATTGAGAATG+AGG | 0.513026 | 7.3:+6229163 | MS.gene06992:CDS |
| TAATAGAGGCTTCTCAGGCT+CGG | 0.513747 | 7.3:-6229922 | None:intergenic |
| TCCAAATACTCTTCTGCCAC+TGG | 0.516839 | 7.3:-6229045 | None:intergenic |
| AAAAGGCTTGCTCGGCATAC+CGG | 0.517139 | 7.3:-6226526 | None:intergenic |
| CATCAACATCAACAGGAGTA+GGG | 0.517223 | 7.3:-6226177 | None:intergenic |
| TGATAGCGAGGATGACTTTG+AGG | 0.518712 | 7.3:+6229133 | MS.gene06992:CDS |
| GAAGGCAGAGTCTTCTCAGT+TGG | 0.520406 | 7.3:+6228101 | MS.gene06992:CDS |
| AGATGAAGGCAAACGAGGAC+CGG | 0.528426 | 7.3:-6226128 | None:intergenic |
| AAGTCGAAGTTGAAGGTCAA+GGG | 0.530154 | 7.3:+6231771 | MS.gene06992:CDS |
| TGTGGTATAGAGGCGTGGAT+TGG | 0.534234 | 7.3:+6228908 | MS.gene06992:intron |
| CAGATCAAGCGAAGGTGGAA+AGG | 0.534540 | 7.3:+6226911 | MS.gene06992:CDS |
| GAGAAGAAGCGAAAGGAAAG+AGG | 0.535580 | 7.3:+6226037 | MS.gene06992:CDS |
| ATACCTCGAAATCAGAAGAA+AGG | 0.536953 | 7.3:-6226300 | None:intergenic |
| TAATCCTAGTCACGATGTTG+TGG | 0.538812 | 7.3:+6226756 | MS.gene06992:CDS |
| GAATGCTGCTGATTCTGATC+CGG | 0.540001 | 7.3:+6228463 | MS.gene06992:CDS |
| ACATATATACCTCAGCCCTC+TGG | 0.540183 | 7.3:-6228170 | None:intergenic |
| ACTGATATACAGCAAAAGAA+AGG | 0.541411 | 7.3:+6229966 | MS.gene06992:CDS |
| GACTTTGAGGCCAAGAAAAG+TGG | 0.542359 | 7.3:+6229146 | MS.gene06992:CDS |
| TCTTTGGAAGTATAAGGAAA+AGG | 0.548729 | 7.3:-6231241 | None:intergenic |
| TCTATAAAGGATGAGAAGGA+TGG | 0.549986 | 7.3:+6227964 | MS.gene06992:CDS |
| GGGTTAGATTCAGGTCCAAT+GGG | 0.550457 | 7.3:-6231289 | None:intergenic |
| AGAAGCCCTCAAGAAGAGAA+AGG | 0.556911 | 7.3:+6230040 | MS.gene06992:CDS |
| ATCAGCAGCATTCTCATCAT+CGG | 0.557010 | 7.3:-6228453 | None:intergenic |
| GAGGTCCAAATGTAGTTGCC+GGG | 0.559756 | 7.3:-6231309 | None:intergenic |
| TCCCTATTTCTCTGAATAAG+GGG | 0.561919 | 7.3:-6226979 | None:intergenic |
| AAAGTCGAAGTTGAAGGTCA+AGG | 0.563646 | 7.3:+6231770 | MS.gene06992:CDS |
| CTCTGAGAAATCAAGCAAGA+AGG | 0.565144 | 7.3:+6230088 | MS.gene06992:CDS |
| TCAGACTCTAGATATAGCTC+CGG | 0.566700 | 7.3:-6226730 | None:intergenic |
| AACCCAGAACTAAATTTGAG+AGG | 0.568491 | 7.3:+6227076 | MS.gene06992:CDS |
| TGAGAAGGATGGGCATAACC+AGG | 0.568538 | 7.3:+6227975 | MS.gene06992:CDS |
| ACAAGAACGCCAGAGGGCTG+AGG | 0.569776 | 7.3:+6228161 | MS.gene06992:CDS |
| GATGAAGGACAGATGGTGGA+TGG | 0.571626 | 7.3:+6229765 | MS.gene06992:CDS |
| AGAAGACTTCCGACAATCAA+CGG | 0.578262 | 7.3:+6226098 | MS.gene06992:CDS |
| TCATATCGTAGGCAATAAGA+AGG | 0.579455 | 7.3:+6226687 | MS.gene06992:intron |
| CACGATGTTGTGGAAGGTGA+TGG | 0.580194 | 7.3:+6226766 | MS.gene06992:CDS |
| GGTTTAGATAAGCAGGATGA+AGG | 0.580805 | 7.3:+6228326 | MS.gene06992:CDS |
| CTATAAAGGATGAGAAGGAT+GGG | 0.581490 | 7.3:+6227965 | MS.gene06992:CDS |
| AAAGGCAGATCAAGCGAAGG+TGG | 0.582891 | 7.3:+6226906 | MS.gene06992:CDS |
| GGTTTCTATAAAGGATGAGA+AGG | 0.584067 | 7.3:+6227960 | MS.gene06992:intron |
| TTATGAACTTCCATCTCAAG+AGG | 0.584960 | 7.3:+6229815 | MS.gene06992:CDS |
| AAAGATAGCAATCCCGACTT+GGG | 0.584979 | 7.3:-6228557 | None:intergenic |
| TCAAGCGAAGGTGGAAAGGA+AGG | 0.585407 | 7.3:+6226915 | MS.gene06992:CDS |
| CGAATGAGCTCCTCTTGAGA+TGG | 0.586031 | 7.3:-6229825 | None:intergenic |
| CAAAGAAACAAGTCACAAAG+TGG | 0.588340 | 7.3:+6226953 | MS.gene06992:CDS |
| CCTTCCACAACATCGTGACT+AGG | 0.590447 | 7.3:-6226760 | None:intergenic |
| TACAGATGATGAAGGACAGA+TGG | 0.590901 | 7.3:+6229758 | MS.gene06992:CDS |
| GATAGCGATACAGATGATGA+AGG | 0.593448 | 7.3:+6229750 | MS.gene06992:CDS |
| CATTGGACCTGAATCTAACC+CGG | 0.599340 | 7.3:+6231291 | MS.gene06992:CDS |
| AAGAAGTTGAATAGAACCAA+AGG | 0.600324 | 7.3:+6231711 | MS.gene06992:CDS |
| GAAAGGTTTACCATCCTGGA+TGG | 0.600524 | 7.3:+6229983 | MS.gene06992:CDS |
| TTCAAAGATGAAGGCAAACG+AGG | 0.601593 | 7.3:-6226133 | None:intergenic |
| TGTTCATGCACCACTTCCAA+AGG | 0.604646 | 7.3:+6226888 | MS.gene06992:CDS |
| ATCCTGATCATTCAAGACTC+CGG | 0.607138 | 7.3:+6226830 | MS.gene06992:CDS |
| AGATGATGAAATGCCCAAGT+CGG | 0.607430 | 7.3:+6228544 | MS.gene06992:CDS |
| CCTAGTCACGATGTTGTGGA+AGG | 0.607641 | 7.3:+6226760 | MS.gene06992:CDS |
| ATAACCAGGCTGCTAAATTG+CGG | 0.608153 | 7.3:+6227989 | MS.gene06992:CDS |
| ACCAAAGGCAATGATAGCAA+AGG | 0.609468 | 7.3:+6231726 | MS.gene06992:CDS |
| AAGATGATGAGAGACATGAA+AGG | 0.617021 | 7.3:+6226487 | MS.gene06992:CDS |
| AAGAAGCTGGAGGATTCTGA+TGG | 0.618164 | 7.3:+6228996 | MS.gene06992:CDS |
| GACGCCAACAACCGCCACAT+CGG | 0.618823 | 7.3:+6226061 | MS.gene06992:CDS |
| TCTTTGAAAATGTTCAGTCA+CGG | 0.619063 | 7.3:-6228360 | None:intergenic |
| GTGCAGGTGGTGAAGAAACC+AGG | 0.621465 | 7.3:+6231609 | MS.gene06992:intron |
| TGTTCTTTGACCATCCAGGA+TGG | 0.625183 | 7.3:-6229993 | None:intergenic |
| CTCTGATGATGATTCTGGGG+AGG | 0.628586 | 7.3:+6226464 | MS.gene06992:CDS |
| GGGAAGTGATCATCTGCAGA+AGG | 0.630064 | 7.3:+6229184 | MS.gene06992:CDS |
| GACACAAACACAAAAGTCCA+TGG | 0.630633 | 7.3:+6228282 | MS.gene06992:CDS |
| TCAGTCCATTGACCCCAACC+AGG | 0.630731 | 7.3:-6229948 | None:intergenic |
| CAATCTGATGATGACGACGA+CGG | 0.632821 | 7.3:+6226405 | MS.gene06992:CDS |
| TGACTCTGATGATGATTCTG+GGG | 0.636517 | 7.3:+6226461 | MS.gene06992:CDS |
| AGATGATGAAGGACAGATGG+TGG | 0.637774 | 7.3:+6229761 | MS.gene06992:CDS |
| CATGAAACAAGAACGCCAGA+GGG | 0.639643 | 7.3:+6228155 | MS.gene06992:CDS |
| AATTGGTGCTGATAATAAGG+TGG | 0.640246 | 7.3:+6229085 | MS.gene06992:CDS |
| TGGCAGAAGAGTATTTGGAA+TGG | 0.644354 | 7.3:+6229049 | MS.gene06992:CDS |
| AATGGCCGAGAAGAAGCGAA+AGG | 0.646328 | 7.3:+6226030 | None:intergenic |
| TTACGATAACAGTGATAGCG+AGG | 0.650293 | 7.3:+6229121 | MS.gene06992:CDS |
| TGATCAGGATCGTCACGAAG+AGG | 0.652108 | 7.3:-6226817 | None:intergenic |
| TCCAAAGGCAGATCAAGCGA+AGG | 0.655899 | 7.3:+6226903 | MS.gene06992:CDS |
| CCATGAAACAAGAACGCCAG+AGG | 0.656373 | 7.3:+6228154 | MS.gene06992:CDS |
| AGTGGCAACATTGAGAATGA+GGG | 0.656546 | 7.3:+6229164 | MS.gene06992:CDS |
| AGCGAAGGTGGAAAGGAAGG+TGG | 0.656706 | 7.3:+6226918 | MS.gene06992:CDS |
| TCGTAGGCAATAAGAAGGCG+AGG | 0.658257 | 7.3:+6226692 | MS.gene06992:intron |
| TTTGTTGTGGTATAGAGGCG+TGG | 0.661646 | 7.3:+6228903 | MS.gene06992:intron |
| TGATGGACGAATTACTATCG+AGG | 0.680624 | 7.3:+6226783 | MS.gene06992:CDS |
| TATTATCATTGACAGAGACA+GGG | 0.681643 | 7.3:-6226273 | None:intergenic |
| AAAGACACTAGAAGTGCTGG+AGG | 0.683825 | 7.3:+6228520 | MS.gene06992:CDS |
| TAGTCTTCTTGACATGAACA+AGG | 0.684381 | 7.3:+6227158 | MS.gene06992:CDS |
| AGATTCCATGAAGAAGCTGG+AGG | 0.687128 | 7.3:+6228986 | MS.gene06992:CDS |
| CCTTATTCAGAGAAATAGGG+AGG | 0.695528 | 7.3:+6226981 | MS.gene06992:CDS |
| CTCACGATAAACCAGAGCAG+CGG | 0.696038 | 7.3:+6231670 | MS.gene06992:CDS |
| CGTCACGAAGAGGATTAAGG+AGG | 0.705412 | 7.3:-6226807 | None:intergenic |
| CTTCAGCGTAAAATGCAACG+TGG | 0.719561 | 7.3:+6228305 | MS.gene06992:CDS |
| CCAAAAGTAGCATCTACCAG+TGG | 0.721080 | 7.3:+6229029 | MS.gene06992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTTGTAAAAAGTT+TGG | - | chr7.3:6230380-6230399 | None:intergenic | 10.0% |
| !! | CTCTTAACTAATTTAAATAA+AGG | - | chr7.3:6231423-6231442 | None:intergenic | 15.0% |
| !! | GAATAAATAATTACCATAAA+AGG | - | chr7.3:6228584-6228603 | None:intergenic | 15.0% |
| !! | TAAATTTCAAAATTCAAACA+TGG | + | chr7.3:6227383-6227402 | MS.gene06992:intron | 15.0% |
| !! | TTGATTTATACATAAATGTA+TGG | + | chr7.3:6230970-6230989 | MS.gene06992:intron | 15.0% |
| !!! | AATATATACTTTTGAAATGT+TGG | - | chr7.3:6230434-6230453 | None:intergenic | 15.0% |
| !!! | AGCATAAAATCATAAATTTT+TGG | + | chr7.3:6227732-6227751 | MS.gene06992:intron | 15.0% |
| !!! | GCATAAAATCATAAATTTTT+GGG | + | chr7.3:6227733-6227752 | MS.gene06992:intron | 15.0% |
| !!! | TTTAATTTTTATCATATCGT+AGG | + | chr7.3:6226676-6226695 | MS.gene06992:intron | 15.0% |
| !! | AAATGAAAATTCAAGACATT+TGG | - | chr7.3:6227321-6227340 | None:intergenic | 20.0% |
| !! | AACAATTCAGTTTATATTCT+TGG | - | chr7.3:6229665-6229684 | None:intergenic | 20.0% |
| !! | AAGAATATAAACTGAATTGT+TGG | + | chr7.3:6229664-6229683 | MS.gene06992:intron | 20.0% |
| !! | AATGAAAATTCAAGACATTT+GGG | - | chr7.3:6227320-6227339 | None:intergenic | 20.0% |
| !! | AATTAGTTAAGAGTGATATT+TGG | + | chr7.3:6231430-6231449 | MS.gene06992:intron | 20.0% |
| !! | AGAAGTCTTCAAAATTTAAT+AGG | + | chr7.3:6229598-6229617 | MS.gene06992:CDS | 20.0% |
| !! | ATAAAGAAGAAAAAAATCAG+TGG | - | chr7.3:6230340-6230359 | None:intergenic | 20.0% |
| !! | CAAAAGAATAAAATCAAAAC+CGG | - | chr7.3:6231184-6231203 | None:intergenic | 20.0% |
| !! | CAATGTTGATGTTTATAATT+CGG | - | chr7.3:6230156-6230175 | None:intergenic | 20.0% |
| !! | CATATATGTTATTACATTGA+TGG | - | chr7.3:6227782-6227801 | None:intergenic | 20.0% |
| !! | TAAAAGAAGATAAATGTTCT+TGG | + | chr7.3:6228211-6228230 | MS.gene06992:intron | 20.0% |
| !! | TATATAACTTAGTGTATGTT+CGG | + | chr7.3:6230746-6230765 | MS.gene06992:intron | 20.0% |
| !! | TATATATTATGCTCTAATGT+TGG | + | chr7.3:6230446-6230465 | MS.gene06992:intron | 20.0% |
| !! | TATTTATTCTTACCATCAAA+AGG | - | chr7.3:6226546-6226565 | None:intergenic | 20.0% |
| !! | TCATAAACAACAAAAAACAA+CGG | - | chr7.3:6227931-6227950 | None:intergenic | 20.0% |
| !! | TGATGATAAACACAAATAAA+AGG | - | chr7.3:6231387-6231406 | None:intergenic | 20.0% |
| !! | TTTATGTAATTTATGTTAGC+TGG | + | chr7.3:6227192-6227211 | MS.gene06992:intron | 20.0% |
| !! | TTTGATATCTTCCATATATA+TGG | + | chr7.3:6229506-6229525 | MS.gene06992:intron | 20.0% |
| !!! | AATTTTCTGCTTTTAGTTTA+TGG | + | chr7.3:6228869-6228888 | MS.gene06992:intron | 20.0% |
| !!! | ATAATTGATTTTGTCATGTT+AGG | + | chr7.3:6230808-6230827 | MS.gene06992:intron | 20.0% |
| !!! | ATATATCTTTTGCAAATGTT+TGG | + | chr7.3:6228795-6228814 | MS.gene06992:intron | 20.0% |
| !!! | ATGATTTTATTGGAAAAAAG+AGG | + | chr7.3:6226430-6226449 | MS.gene06992:CDS | 20.0% |
| !!! | CTACAATTCAATAATTTGTA+AGG | - | chr7.3:6227580-6227599 | None:intergenic | 20.0% |
| !!! | GGTTTCTTAAATATTTTCTT+TGG | + | chr7.3:6228816-6228835 | MS.gene06992:intron | 20.0% |
| !!! | GTTATTTTCCAATCATAAAA+GGG | - | chr7.3:6227481-6227500 | None:intergenic | 20.0% |
| !!! | TAATAGAATACGATTCTTTT+AGG | + | chr7.3:6227809-6227828 | MS.gene06992:intron | 20.0% |
| !!! | TGAATAATTTCCTATTTTCT+TGG | + | chr7.3:6229273-6229292 | MS.gene06992:intron | 20.0% |
| !!! | TTGTTTTACTTAATGGTAAT+GGG | + | chr7.3:6229309-6229328 | MS.gene06992:intron | 20.0% |
| !!! | TTTGTTTTACTTAATGGTAA+TGG | + | chr7.3:6229308-6229327 | MS.gene06992:intron | 20.0% |
| !!! | TTTTTTCTTCTTTATTACCA+GGG | + | chr7.3:6230345-6230364 | MS.gene06992:intron | 20.0% |
| !!! | TTTTTTTCTTCTTTATTACC+AGG | + | chr7.3:6230344-6230363 | MS.gene06992:intron | 20.0% |
| ! | AAATATATTCTTGTATGTGC+AGG | + | chr7.3:6231593-6231612 | MS.gene06992:intron | 25.0% |
| ! | AACTAAATTTGAGAGGAATA+TGG | + | chr7.3:6227083-6227102 | MS.gene06992:CDS | 25.0% |
| ! | AAGGTAAAGTGATTTATGAT+AGG | - | chr7.3:6231021-6231040 | None:intergenic | 25.0% |
| ! | AGAACAATAAAAATACTGAG+AGG | - | chr7.3:6227628-6227647 | None:intergenic | 25.0% |
| ! | AGTTCATCATGACAAAATTA+TGG | + | chr7.3:6227113-6227132 | MS.gene06992:CDS | 25.0% |
| ! | ATACATATATATACCATCAG+AGG | - | chr7.3:6228653-6228672 | None:intergenic | 25.0% |
| ! | ATATGTTATTACATTGATGG+CGG | - | chr7.3:6227779-6227798 | None:intergenic | 25.0% |
| ! | CGAAATGAACAATGAAATTA+AGG | - | chr7.3:6226339-6226358 | None:intergenic | 25.0% |
| ! | CTCTTAATTGGATATACTTA+CGG | + | chr7.3:6231477-6231496 | MS.gene06992:intron | 25.0% |
| ! | GCTACAAAAGAAAAAAATAC+AGG | - | chr7.3:6231565-6231584 | None:intergenic | 25.0% |
| ! | GGGTAACTAATATTTATTTC+AGG | - | chr7.3:6228628-6228647 | None:intergenic | 25.0% |
| ! | GTTAAAGAAAGTTAGATTGA+AGG | + | chr7.3:6228083-6228102 | MS.gene06992:CDS | 25.0% |
| ! | TATAAAACCGATAGAATTTG+AGG | + | chr7.3:6231638-6231657 | MS.gene06992:CDS | 25.0% |
| ! | TATGTAGTAAAGCTCTTAAT+TGG | + | chr7.3:6231465-6231484 | MS.gene06992:intron | 25.0% |
| ! | TCTGACTAAAAGTAAATTGA+AGG | - | chr7.3:6231040-6231059 | None:intergenic | 25.0% |
| ! | TCTTAATTGGATATACTTAC+GGG | + | chr7.3:6231478-6231497 | MS.gene06992:intron | 25.0% |
| ! | TGACTTTAAATACAAGGTTT+AGG | + | chr7.3:6230115-6230134 | MS.gene06992:intron | 25.0% |
| ! | TTAAGAGCTTTACTACATAA+AGG | - | chr7.3:6231464-6231483 | None:intergenic | 25.0% |
| ! | TTATGATTGGAAAATAACCT+TGG | + | chr7.3:6227483-6227502 | MS.gene06992:intron | 25.0% |
| ! | TTGATGAAAAAACAGATCTA+GGG | + | chr7.3:6227019-6227038 | MS.gene06992:CDS | 25.0% |
| ! | TTTATGCATTTCTTGAAACT+TGG | + | chr7.3:6229342-6229361 | MS.gene06992:intron | 25.0% |
| ! | TTTGATGAAAAAACAGATCT+AGG | + | chr7.3:6227018-6227037 | MS.gene06992:CDS | 25.0% |
| !! | ATTGCTATCTTTACCTTTTA+TGG | + | chr7.3:6228568-6228587 | MS.gene06992:CDS | 25.0% |
| !! | GGATTTGTTTGATAAATTAC+TGG | + | chr7.3:6227404-6227423 | MS.gene06992:intron | 25.0% |
| !! | TTTATTCTTTTGGATATGAC+AGG | + | chr7.3:6231192-6231211 | MS.gene06992:intron | 25.0% |
| !! | TTTGATAAATTACTGGTTGT+TGG | + | chr7.3:6227411-6227430 | MS.gene06992:intron | 25.0% |
| !!! | ATCTCTTTTTTCAAAGATGA+AGG | - | chr7.3:6226145-6226164 | None:intergenic | 25.0% |
| !!! | ATCTTTTATTTTGGTCAACA+CGG | - | chr7.3:6230650-6230669 | None:intergenic | 25.0% |
| !!! | CAATTTGTTGATTTCTTAAC+CGG | - | chr7.3:6226852-6226871 | None:intergenic | 25.0% |
| !!! | CAGATGTTTGTTTTACTTAA+TGG | + | chr7.3:6229302-6229321 | MS.gene06992:intron | 25.0% |
| !!! | CGGTTTTGATTTTATTCTTT+TGG | + | chr7.3:6231182-6231201 | MS.gene06992:intron | 25.0% |
| !!! | GGTTATTTTCCAATCATAAA+AGG | - | chr7.3:6227482-6227501 | None:intergenic | 25.0% |
| !!! | GTATTGTCGATCTTTTATTT+TGG | - | chr7.3:6230659-6230678 | None:intergenic | 25.0% |
| !!! | TGTAGAAGATGATTTTGAAA+AGG | + | chr7.3:6229869-6229888 | MS.gene06992:CDS | 25.0% |
| !!! | TGTTTTGAAAAACTTACTTC+AGG | - | chr7.3:6231343-6231362 | None:intergenic | 25.0% |
| !!! | TTTTCATCAAAGTACTTAGT+AGG | - | chr7.3:6227009-6227028 | None:intergenic | 25.0% |
| AAAGGATAAAATGTTTGCCA+AGG | - | chr7.3:6231369-6231388 | None:intergenic | 30.0% | |
| AAGAAGTTGAATAGAACCAA+AGG | + | chr7.3:6231711-6231730 | MS.gene06992:CDS | 30.0% | |
| AATAAAAATACTGAGAGGAG+GGG | - | chr7.3:6227623-6227642 | None:intergenic | 30.0% | |
| AATACATGTCCTATTGATAC+TGG | + | chr7.3:6228743-6228762 | MS.gene06992:intron | 30.0% | |
| AATTACCATCTGACAATTTC+AGG | - | chr7.3:6228853-6228872 | None:intergenic | 30.0% | |
| ACAATAAAAATACTGAGAGG+AGG | - | chr7.3:6227625-6227644 | None:intergenic | 30.0% | |
| ACTGATATACAGCAAAAGAA+AGG | + | chr7.3:6229966-6229985 | MS.gene06992:CDS | 30.0% | |
| AGATGTTTACATCAACTCAA+AGG | - | chr7.3:6230496-6230515 | None:intergenic | 30.0% | |
| ATAAACAGTACAGAAGACAA+TGG | - | chr7.3:6231136-6231155 | None:intergenic | 30.0% | |
| ATATAAGCCATAGTCTTTGT+GGG | - | chr7.3:6228686-6228705 | None:intergenic | 30.0% | |
| ATATATATACCATCAGAGGT+TGG | - | chr7.3:6228649-6228668 | None:intergenic | 30.0% | |
| ATATATGCCTTCATCATAGT+TGG | - | chr7.3:6228781-6228800 | None:intergenic | 30.0% | |
| ATCAACATTGAAGACTATGT+CGG | + | chr7.3:6230166-6230185 | MS.gene06992:intron | 30.0% | |
| ATGAGATTGTAAAAAATCCC+GGG | + | chr7.3:6229378-6229397 | MS.gene06992:CDS | 30.0% | |
| ATGCGTTCCTAAAATAAGTT+GGG | - | chr7.3:6228254-6228273 | None:intergenic | 30.0% | |
| ATTATCAGCACCAATTGTTT+GGG | - | chr7.3:6229081-6229100 | None:intergenic | 30.0% | |
| ATTCTATGATCCTCTACTAT+CGG | - | chr7.3:6227236-6227255 | None:intergenic | 30.0% | |
| CAAAATTTAATAGGCCTGTT+AGG | + | chr7.3:6229607-6229626 | MS.gene06992:CDS | 30.0% | |
| CAATAAAAATACTGAGAGGA+GGG | - | chr7.3:6227624-6227643 | None:intergenic | 30.0% | |
| CATAAAAAAGTCGAAGTTGA+AGG | + | chr7.3:6231764-6231783 | MS.gene06992:CDS | 30.0% | |
| CCAACAAAATGCCATATATA+TGG | - | chr7.3:6229520-6229539 | None:intergenic | 30.0% | |
| CTGAATCCATTTGTTTGTTT+AGG | + | chr7.3:6226371-6226390 | MS.gene06992:intron | 30.0% | |
| CTTCATATTCTTGTACAGTA+AGG | - | chr7.3:6228968-6228987 | None:intergenic | 30.0% | |
| GATGAGATTGTAAAAAATCC+CGG | + | chr7.3:6229377-6229396 | MS.gene06992:CDS | 30.0% | |
| GGTTAGTGACTTTAAATACA+AGG | + | chr7.3:6230109-6230128 | MS.gene06992:intron | 30.0% | |
| GTGAACATTACAAAGATTTG+TGG | + | chr7.3:6230225-6230244 | MS.gene06992:intron | 30.0% | |
| TACTTTGCGTTTAGCATTTA+TGG | + | chr7.3:6227353-6227372 | MS.gene06992:intron | 30.0% | |
| TATATAAGCCATAGTCTTTG+TGG | - | chr7.3:6228687-6228706 | None:intergenic | 30.0% | |
| TATATATACCATCAGAGGTT+GGG | - | chr7.3:6228648-6228667 | None:intergenic | 30.0% | |
| TATTATCAGCACCAATTGTT+TGG | - | chr7.3:6229082-6229101 | None:intergenic | 30.0% | |
| TATTATCATTGACAGAGACA+GGG | - | chr7.3:6226276-6226295 | None:intergenic | 30.0% | |
| TCTCATCCTAAACAAACAAA+TGG | - | chr7.3:6226380-6226399 | None:intergenic | 30.0% | |
| TGCTTGATAGGTTTCTATAA+AGG | + | chr7.3:6227951-6227970 | MS.gene06992:intron | 30.0% | |
| TTATACATCAATCATGGACT+CGG | - | chr7.3:6227297-6227316 | None:intergenic | 30.0% | |
| TTATTATCATTGACAGAGAC+AGG | - | chr7.3:6226277-6226296 | None:intergenic | 30.0% | |
| TTCACTTCCTCAAATTCTAT+CGG | - | chr7.3:6231648-6231667 | None:intergenic | 30.0% | |
| TTCTTTCTAGATTCTTCTTC+AGG | - | chr7.3:6226241-6226260 | None:intergenic | 30.0% | |
| ! | AAAATCTTGTTTGCCTTATC+CGG | - | chr7.3:6228485-6228504 | None:intergenic | 30.0% |
| ! | AAGACATCTTTGGAAGTATA+AGG | - | chr7.3:6231250-6231269 | None:intergenic | 30.0% |
| ! | AAGCCTATTTGAAATCAGTT+TGG | - | chr7.3:6230587-6230606 | None:intergenic | 30.0% |
| ! | AGTCCAAACTGATTTCAAAT+AGG | + | chr7.3:6230581-6230600 | MS.gene06992:intron | 30.0% |
| ! | ATAATTCGGAAGCATATGAA+AGG | - | chr7.3:6230142-6230161 | None:intergenic | 30.0% |
| ! | ATTCCTCTCAAATTTAGTTC+TGG | - | chr7.3:6227082-6227101 | None:intergenic | 30.0% |
| ! | CCATATATATGGCATTTTGT+TGG | + | chr7.3:6229517-6229536 | MS.gene06992:intron | 30.0% |
| ! | GAAACTTCGTATGTAGTTTT+TGG | - | chr7.3:6229404-6229423 | None:intergenic | 30.0% |
| ! | GAAGTCAAAATTGATTCTAG+AGG | + | chr7.3:6230782-6230801 | MS.gene06992:intron | 30.0% |
| ! | TAACAGACGATGATATGTTT+TGG | - | chr7.3:6228067-6228086 | None:intergenic | 30.0% |
| ! | TCTTTGAAAATGTTCAGTCA+CGG | - | chr7.3:6228363-6228382 | None:intergenic | 30.0% |
| ! | TCTTTGGAAGTATAAGGAAA+AGG | - | chr7.3:6231244-6231263 | None:intergenic | 30.0% |
| ! | TGCGTCTCAAAATCTAATTT+TGG | - | chr7.3:6230558-6230577 | None:intergenic | 30.0% |
| ! | TGGACTGATTTACTGATAAT+GGG | + | chr7.3:6229537-6229556 | MS.gene06992:intron | 30.0% |
| ! | TGTTGTTTATGATGCTTGAT+AGG | + | chr7.3:6227939-6227958 | MS.gene06992:intron | 30.0% |
| ! | TTGGACTGATTTACTGATAA+TGG | + | chr7.3:6229536-6229555 | MS.gene06992:intron | 30.0% |
| ! | TTTGGGTTATACATCAATCA+TGG | - | chr7.3:6227303-6227322 | None:intergenic | 30.0% |
| ! | TTTTACATTACCGATAGTAG+AGG | + | chr7.3:6227223-6227242 | MS.gene06992:intron | 30.0% |
| !! | AACAATTGGTGCTGATAATA+AGG | + | chr7.3:6229082-6229101 | MS.gene06992:CDS | 30.0% |
| !! | AGCTCTGAAAAAGATCAATT+GGG | + | chr7.3:6229723-6229742 | MS.gene06992:CDS | 30.0% |
| !! | AGTTTTTCAAAACAGTTCCT+TGG | + | chr7.3:6231349-6231368 | MS.gene06992:intron | 30.0% |
| !! | ATCGGTTTTATAATAACACC+TGG | - | chr7.3:6231630-6231649 | None:intergenic | 30.0% |
| !! | TGATTTTGAAAAGGATAAGC+AGG | + | chr7.3:6229878-6229897 | MS.gene06992:CDS | 30.0% |
| !! | TTCCTCTCAAATTTAGTTCT+GGG | - | chr7.3:6227081-6227100 | None:intergenic | 30.0% |
| !! | TTTCAAGTTAGAATCAGCTA+TGG | - | chr7.3:6230862-6230881 | None:intergenic | 30.0% |
| !!! | CAGTTGGTGCTATTAATTTT+TGG | - | chr7.3:6227860-6227879 | None:intergenic | 30.0% |
| !!! | CTTCAACTTCGACTTTTTTA+TGG | - | chr7.3:6231766-6231785 | None:intergenic | 30.0% |
| !!! | GAATTTTTTTACTACTGCCA+TGG | + | chr7.3:6227689-6227708 | MS.gene06992:intron | 30.0% |
| !!! | TCGCAAAGAATCTGTTTTTA+AGG | + | chr7.3:6229250-6229269 | MS.gene06992:CDS | 30.0% |
| AAAAGAAAGGTTTACCATCC+TGG | + | chr7.3:6229979-6229998 | MS.gene06992:CDS | 35.0% | |
| AACCAACCATGTAGAAAGAT+TGG | + | chr7.3:6227655-6227674 | MS.gene06992:intron | 35.0% | |
| AACCCAGAACTAAATTTGAG+AGG | + | chr7.3:6227076-6227095 | MS.gene06992:CDS | 35.0% | |
| AACCCCTTATTCAGAGAAAT+AGG | + | chr7.3:6226977-6226996 | MS.gene06992:CDS | 35.0% | |
| AAGATGATGAGAGACATGAA+AGG | + | chr7.3:6226487-6226506 | MS.gene06992:CDS | 35.0% | |
| ACCCCTTATTCAGAGAAATA+GGG | + | chr7.3:6226978-6226997 | MS.gene06992:CDS | 35.0% | |
| ACTCTGATGAAAGACATCTT+TGG | - | chr7.3:6231260-6231279 | None:intergenic | 35.0% | |
| AGAAATTTGAACAGTGCAGT+TGG | - | chr7.3:6227876-6227895 | None:intergenic | 35.0% | |
| AGAGCTTTACTACATAAAGG+AGG | - | chr7.3:6231461-6231480 | None:intergenic | 35.0% | |
| AGGATGTTACAACGAATTAC+CGG | + | chr7.3:6226507-6226526 | MS.gene06992:CDS | 35.0% | |
| ATAAAAATACTGAGAGGAGG+GGG | - | chr7.3:6227622-6227641 | None:intergenic | 35.0% | |
| ATACCTCGAAATCAGAAGAA+AGG | - | chr7.3:6226303-6226322 | None:intergenic | 35.0% | |
| ATATCCCACTTAAAACACCA+TGG | - | chr7.3:6227709-6227728 | None:intergenic | 35.0% | |
| ATCCAATCTTTCTACATGGT+TGG | - | chr7.3:6227660-6227679 | None:intergenic | 35.0% | |
| ATGAAAGTTCCCAGAGAAAA+AGG | + | chr7.3:6230015-6230034 | MS.gene06992:CDS | 35.0% | |
| ATGGAAGCTCATAAAAACGA+TGG | + | chr7.3:6227132-6227151 | MS.gene06992:CDS | 35.0% | |
| ATGTCCTATTGATACTGGAA+AGG | + | chr7.3:6228748-6228767 | MS.gene06992:intron | 35.0% | |
| CAAAGAAACAAGTCACAAAG+TGG | + | chr7.3:6226953-6226972 | MS.gene06992:CDS | 35.0% | |
| CATGCGTTCCTAAAATAAGT+TGG | - | chr7.3:6228255-6228274 | None:intergenic | 35.0% | |
| CGAGAAACTCCAAACAAAAA+CGG | + | chr7.3:6231216-6231235 | MS.gene06992:CDS | 35.0% | |
| CTATAAAGGATGAGAAGGAT+GGG | + | chr7.3:6227965-6227984 | MS.gene06992:CDS | 35.0% | |
| CTATACCACAACAAATCAGA+TGG | - | chr7.3:6228898-6228917 | None:intergenic | 35.0% | |
| CTTTACTACATAAAGGAGGA+CGG | - | chr7.3:6231457-6231476 | None:intergenic | 35.0% | |
| GACTAGAAAAAGGAAAACCA+TGG | + | chr7.3:6228394-6228413 | MS.gene06992:CDS | 35.0% | |
| GAGGAAGAATGATGTTATTC+CGG | + | chr7.3:6226711-6226730 | MS.gene06992:CDS | 35.0% | |
| GGTTTCTATAAAGGATGAGA+AGG | + | chr7.3:6227960-6227979 | MS.gene06992:intron | 35.0% | |
| TAAAGCCTGAAATTGTCAGA+TGG | + | chr7.3:6228845-6228864 | MS.gene06992:intron | 35.0% | |
| TAACTGAGGAGGAATTAAGA+TGG | + | chr7.3:6227512-6227531 | MS.gene06992:intron | 35.0% | |
| TAGTCTTCTTGACATGAACA+AGG | + | chr7.3:6227158-6227177 | MS.gene06992:CDS | 35.0% | |
| TATATTCTTGTATGTGCAGG+TGG | + | chr7.3:6231596-6231615 | MS.gene06992:intron | 35.0% | |
| TATTATGCTCTAATGTTGGC+AGG | + | chr7.3:6230450-6230469 | MS.gene06992:intron | 35.0% | |
| TCATATCGTAGGCAATAAGA+AGG | + | chr7.3:6226687-6226706 | MS.gene06992:intron | 35.0% | |
| TCATCTCATGACGAAAAAGA+AGG | - | chr7.3:6228017-6228036 | None:intergenic | 35.0% | |
| TCGATTTCATCAACATCAAC+AGG | - | chr7.3:6226187-6226206 | None:intergenic | 35.0% | |
| TCTATAAAGGATGAGAAGGA+TGG | + | chr7.3:6227964-6227983 | MS.gene06992:CDS | 35.0% | |
| TCTGAGAAGTCCAAGAAAAT+AGG | - | chr7.3:6229286-6229305 | None:intergenic | 35.0% | |
| TGAAAAAGATCAATTGGGAG+AGG | + | chr7.3:6229728-6229747 | MS.gene06992:CDS | 35.0% | |
| TGAAAGTTCCCAGAGAAAAA+GGG | + | chr7.3:6230016-6230035 | MS.gene06992:CDS | 35.0% | |
| TGAGATGGAAGTTCATAAGA+TGG | - | chr7.3:6229813-6229832 | None:intergenic | 35.0% | |
| TGATTGGAAAATAACCTTGG+CGG | + | chr7.3:6227486-6227505 | MS.gene06992:intron | 35.0% | |
| TGCAATCCAATCTTTCTACA+TGG | - | chr7.3:6227664-6227683 | None:intergenic | 35.0% | |
| TGTCCTATTGATACTGGAAA+GGG | + | chr7.3:6228749-6228768 | MS.gene06992:intron | 35.0% | |
| TTATGAACTTCCATCTCAAG+AGG | + | chr7.3:6229815-6229834 | MS.gene06992:CDS | 35.0% | |
| TTGGCATGAGTAATTGAGTA+TGG | - | chr7.3:6227841-6227860 | None:intergenic | 35.0% | |
| ! | AAACCTGATTGTCTTTTTCC+AGG | + | chr7.3:6227259-6227278 | MS.gene06992:intron | 35.0% |
| ! | ATTGACTCTGATGATGATTC+TGG | + | chr7.3:6226459-6226478 | MS.gene06992:CDS | 35.0% |
| ! | CTCCCTATTTCTCTGAATAA+GGG | - | chr7.3:6226983-6227002 | None:intergenic | 35.0% |
| ! | GACGACGGATATGATTTTAT+TGG | + | chr7.3:6226420-6226439 | MS.gene06992:CDS | 35.0% |
| ! | GGACTGATTTACTGATAATG+GGG | + | chr7.3:6229538-6229557 | MS.gene06992:intron | 35.0% |
| ! | GTTGTTCTCCCTTTTATGAT+TGG | + | chr7.3:6227470-6227489 | MS.gene06992:intron | 35.0% |
| ! | TACCTTTTTCCATGTATCTG+AGG | - | chr7.3:6229435-6229454 | None:intergenic | 35.0% |
| ! | TCCCTATTTCTCTGAATAAG+GGG | - | chr7.3:6226982-6227001 | None:intergenic | 35.0% |
| ! | TGAACATTTTCAAAGACACG+AGG | + | chr7.3:6228367-6228386 | MS.gene06992:CDS | 35.0% |
| ! | TTGACTCTGATGATGATTCT+GGG | + | chr7.3:6226460-6226479 | MS.gene06992:CDS | 35.0% |
| ! | TTGGATATACTTACGGGTTT+TGG | + | chr7.3:6231484-6231503 | MS.gene06992:intron | 35.0% |
| ! | TTTCTACATGGTTGGTTAAG+AGG | - | chr7.3:6227652-6227671 | None:intergenic | 35.0% |
| !! | AATACTTCAGTGTTGGTCTA+CGG | + | chr7.3:6230674-6230693 | MS.gene06992:intron | 35.0% |
| !! | AATTGGTGCTGATAATAAGG+TGG | + | chr7.3:6229085-6229104 | MS.gene06992:CDS | 35.0% |
| !! | ATGGTGTTTTAAGTGGGATA+TGG | + | chr7.3:6227708-6227727 | MS.gene06992:intron | 35.0% |
| !! | CGTTTTTGTTTGGAGTTTCT+CGG | - | chr7.3:6231218-6231237 | None:intergenic | 35.0% |
| !! | CTCACTTCCCAACTTATTTT+AGG | + | chr7.3:6228244-6228263 | MS.gene06992:intron | 35.0% |
| !! | GAGCTCTGAAAAAGATCAAT+TGG | + | chr7.3:6229722-6229741 | MS.gene06992:intron | 35.0% |
| !! | GATCTAGGGTTTTCAACTAT+AGG | + | chr7.3:6227033-6227052 | MS.gene06992:CDS | 35.0% |
| !! | TCTGATTTGTTGTGGTATAG+AGG | + | chr7.3:6228898-6228917 | MS.gene06992:intron | 35.0% |
| !! | TCTTTTTCGTCATGAGATGA+AGG | + | chr7.3:6228017-6228036 | MS.gene06992:CDS | 35.0% |
| !!! | AATTTTGACTTCTCCAGAAG+TGG | - | chr7.3:6230774-6230793 | None:intergenic | 35.0% |
| !!! | ATATACTTACGGGTTTTGGA+GGG | + | chr7.3:6231488-6231507 | MS.gene06992:intron | 35.0% |
| !!! | TAGACTTCTTTTTTCCGATG+TGG | - | chr7.3:6226078-6226097 | None:intergenic | 35.0% |
| AAAGATAGCAATCCCGACTT+GGG | - | chr7.3:6228560-6228579 | None:intergenic | 40.0% | |
| AAAGTCGAAGTTGAAGGTCA+AGG | + | chr7.3:6231770-6231789 | MS.gene06992:CDS | 40.0% | |
| AACAGTACAGAAGACAATGG+TGG | - | chr7.3:6231133-6231152 | None:intergenic | 40.0% | |
| AAGTCGAAGTTGAAGGTCAA+GGG | + | chr7.3:6231771-6231790 | MS.gene06992:CDS | 40.0% | |
| AAGTGGCAACATTGAGAATG+AGG | + | chr7.3:6229163-6229182 | MS.gene06992:CDS | 40.0% | |
| AAGTTTGGCAAAGATAACCC+TGG | - | chr7.3:6230365-6230384 | None:intergenic | 40.0% | |
| ACCAAAGGCAATGATAGCAA+AGG | + | chr7.3:6231726-6231745 | MS.gene06992:CDS | 40.0% | |
| ACCATATGTTGTTGCAGAGT+GGG | + | chr7.3:6230277-6230296 | MS.gene06992:intron | 40.0% | |
| ACGAGGAACTGACTAGAAAA+AGG | + | chr7.3:6228384-6228403 | MS.gene06992:CDS | 40.0% | |
| AGAAGACTTCCGACAATCAA+CGG | + | chr7.3:6226098-6226117 | MS.gene06992:CDS | 40.0% | |
| AGAGTCTTCTCAGTTGGAAA+TGG | + | chr7.3:6228107-6228126 | MS.gene06992:CDS | 40.0% | |
| AGATGATGAAATGCCCAAGT+CGG | + | chr7.3:6228544-6228563 | MS.gene06992:CDS | 40.0% | |
| AGCATCCTTTCTCTTCTTGA+GGG | - | chr7.3:6230048-6230067 | None:intergenic | 40.0% | |
| AGTGGCAACATTGAGAATGA+GGG | + | chr7.3:6229164-6229183 | MS.gene06992:CDS | 40.0% | |
| ATAACCAGGCTGCTAAATTG+CGG | + | chr7.3:6227989-6228008 | MS.gene06992:CDS | 40.0% | |
| ATCAGCAGCATTCTCATCAT+CGG | - | chr7.3:6228456-6228475 | None:intergenic | 40.0% | |
| ATCCTGATCATTCAAGACTC+CGG | + | chr7.3:6226830-6226849 | MS.gene06992:CDS | 40.0% | |
| ATGGCTAAAGCCCAAACAAT+TGG | + | chr7.3:6229068-6229087 | MS.gene06992:CDS | 40.0% | |
| ATTAGTTACCCAACCTCTGA+TGG | + | chr7.3:6228637-6228656 | MS.gene06992:intron | 40.0% | |
| CAAGTTAGAATCAGCTATGG+AGG | - | chr7.3:6230859-6230878 | None:intergenic | 40.0% | |
| CATCAACATCAACAGGAGTA+GGG | - | chr7.3:6226180-6226199 | None:intergenic | 40.0% | |
| CCATATTTGCCTCAGATACA+TGG | + | chr7.3:6229423-6229442 | MS.gene06992:CDS | 40.0% | |
| CCTTATTCAGAGAAATAGGG+AGG | + | chr7.3:6226981-6227000 | MS.gene06992:CDS | 40.0% | |
| CTACATTTGGACCTCTTACT+CGG | + | chr7.3:6231317-6231336 | MS.gene06992:CDS | 40.0% | |
| GAACCTGGAAAAAGACAATC+AGG | - | chr7.3:6227265-6227284 | None:intergenic | 40.0% | |
| GAAGCTCATAAAAACGATGG+TGG | + | chr7.3:6227135-6227154 | MS.gene06992:CDS | 40.0% | |
| GACAATCAACGGAAGAAAAC+CGG | + | chr7.3:6226109-6226128 | MS.gene06992:CDS | 40.0% | |
| GACACAAACACAAAAGTCCA+TGG | + | chr7.3:6228282-6228301 | MS.gene06992:CDS | 40.0% | |
| GACTATGTCGGAAATTGCAA+TGG | + | chr7.3:6230178-6230197 | MS.gene06992:intron | 40.0% | |
| GATAGCGATACAGATGATGA+AGG | + | chr7.3:6229750-6229769 | MS.gene06992:CDS | 40.0% | |
| GATCGACAATACTTCAGTGT+TGG | + | chr7.3:6230667-6230686 | MS.gene06992:intron | 40.0% | |
| GCATATTCATTAGCAGCTTC+AGG | - | chr7.3:6228135-6228154 | None:intergenic | 40.0% | |
| GGGCAGGCAAAAAACAAAAA+TGG | + | chr7.3:6229558-6229577 | MS.gene06992:intron | 40.0% | |
| GGTTTAGATAAGCAGGATGA+AGG | + | chr7.3:6228326-6228345 | MS.gene06992:CDS | 40.0% | |
| GTGATCTCCAACTATGATGA+AGG | + | chr7.3:6228771-6228790 | MS.gene06992:intron | 40.0% | |
| TAAAGATAGCAATCCCGACT+TGG | - | chr7.3:6228561-6228580 | None:intergenic | 40.0% | |
| TAATCCTAGTCACGATGTTG+TGG | + | chr7.3:6226756-6226775 | MS.gene06992:CDS | 40.0% | |
| TACAGATGATGAAGGACAGA+TGG | + | chr7.3:6229758-6229777 | MS.gene06992:CDS | 40.0% | |
| TACCACAACAAATCAGATGG+AGG | - | chr7.3:6228895-6228914 | None:intergenic | 40.0% | |
| TACCATATGTTGTTGCAGAG+TGG | + | chr7.3:6230276-6230295 | MS.gene06992:intron | 40.0% | |
| TCACCCTTTCCAGTATCAAT+AGG | - | chr7.3:6228755-6228774 | None:intergenic | 40.0% | |
| TCAGACTCTAGATATAGCTC+CGG | - | chr7.3:6226733-6226752 | None:intergenic | 40.0% | |
| TCATCAACATCAACAGGAGT+AGG | - | chr7.3:6226181-6226200 | None:intergenic | 40.0% | |
| TCTCAGTCAAGTTATTGTGC+CGG | + | chr7.3:6231162-6231181 | MS.gene06992:intron | 40.0% | |
| TCTTTCCTTTCGCTTCTTCT+CGG | - | chr7.3:6226038-6226057 | None:intergenic | 40.0% | |
| TGAAGATTCCATGAAGAAGC+TGG | + | chr7.3:6228983-6229002 | MS.gene06992:CDS | 40.0% | |
| TGACCTTTCTTCTGATTTCG+AGG | + | chr7.3:6226297-6226316 | MS.gene06992:CDS | 40.0% | |
| TGCCTCAGATACATGGAAAA+AGG | + | chr7.3:6229430-6229449 | MS.gene06992:CDS | 40.0% | |
| TTCAAAGATGAAGGCAAACG+AGG | - | chr7.3:6226136-6226155 | None:intergenic | 40.0% | |
| TTCATGTTCTTTGACCATCC+AGG | - | chr7.3:6230000-6230019 | None:intergenic | 40.0% | |
| ! | ACAAAAGACACTAGAAGTGC+TGG | + | chr7.3:6228517-6228536 | MS.gene06992:CDS | 40.0% |
| ! | CCATGTATCTGAGGCAAATA+TGG | - | chr7.3:6229426-6229445 | None:intergenic | 40.0% |
| ! | CCTCCCTATTTCTCTGAATA+AGG | - | chr7.3:6226984-6227003 | None:intergenic | 40.0% |
| ! | CTCTGAGAAATCAAGCAAGA+AGG | + | chr7.3:6230088-6230107 | MS.gene06992:CDS | 40.0% |
| ! | TGACTCTGATGATGATTCTG+GGG | + | chr7.3:6226461-6226480 | MS.gene06992:CDS | 40.0% |
| ! | TGATGGACGAATTACTATCG+AGG | + | chr7.3:6226783-6226802 | MS.gene06992:CDS | 40.0% |
| ! | TGTCATGTTAGGTTGTTCTC+AGG | + | chr7.3:6230819-6230838 | MS.gene06992:intron | 40.0% |
| ! | TTACCATCAAAAGGCTTGCT+CGG | - | chr7.3:6226537-6226556 | None:intergenic | 40.0% |
| ! | TTACGATAACAGTGATAGCG+AGG | + | chr7.3:6229121-6229140 | MS.gene06992:CDS | 40.0% |
| !! | ACTGCCATGGTGTTTTAAGT+GGG | + | chr7.3:6227702-6227721 | MS.gene06992:intron | 40.0% |
| !! | GATATACTTACGGGTTTTGG+AGG | + | chr7.3:6231487-6231506 | MS.gene06992:intron | 40.0% |
| !! | GGTTTTCTTCCGTTGATTGT+CGG | - | chr7.3:6226110-6226129 | None:intergenic | 40.0% |
| !! | GTTATTACATTGATGGCGGA+TGG | - | chr7.3:6227775-6227794 | None:intergenic | 40.0% |
| !! | TACTGCCATGGTGTTTTAAG+TGG | + | chr7.3:6227701-6227720 | MS.gene06992:intron | 40.0% |
| !! | TGATTTACTGATAATGGGGC+AGG | + | chr7.3:6229542-6229561 | MS.gene06992:intron | 40.0% |
| !! | TGGCAGAAGAGTATTTGGAA+TGG | + | chr7.3:6229049-6229068 | MS.gene06992:CDS | 40.0% |
| !!! | ACTTCTTTTTTCCGATGTGG+CGG | - | chr7.3:6226075-6226094 | None:intergenic | 40.0% |
| !!! | CTCAATGTTGCCACTTTTCT+TGG | - | chr7.3:6229159-6229178 | None:intergenic | 40.0% |
| !!! | GAAAAGGCACCGTTTTTGTT+TGG | - | chr7.3:6231228-6231247 | None:intergenic | 40.0% |
| !!! | TTCGTATGTAGTTTTTGGCC+CGG | - | chr7.3:6229399-6229418 | None:intergenic | 40.0% |
| AACCGGAGTCTTGAATGATC+AGG | - | chr7.3:6226835-6226854 | None:intergenic | 45.0% | |
| AAGAAGCTGGAGGATTCTGA+TGG | + | chr7.3:6228996-6229015 | MS.gene06992:CDS | 45.0% | |
| AATCATGGACTCGGAATGCA+TGG | - | chr7.3:6227288-6227307 | None:intergenic | 45.0% | |
| ACATATATACCTCAGCCCTC+TGG | - | chr7.3:6228173-6228192 | None:intergenic | 45.0% | |
| ACCTTTACATCGTGCCTAAC+AGG | - | chr7.3:6229624-6229643 | None:intergenic | 45.0% | |
| AGAAGCCCTCAAGAAGAGAA+AGG | + | chr7.3:6230040-6230059 | MS.gene06992:CDS | 45.0% | |
| AGAATCCTCCAGCTTCTTCA+TGG | - | chr7.3:6228994-6229013 | None:intergenic | 45.0% | |
| AGAGGTCCAAATGTAGTTGC+CGG | - | chr7.3:6231313-6231332 | None:intergenic | 45.0% | |
| AGATGATGAAGGACAGATGG+TGG | + | chr7.3:6229761-6229780 | MS.gene06992:CDS | 45.0% | |
| AGATTCCATGAAGAAGCTGG+AGG | + | chr7.3:6228986-6229005 | MS.gene06992:CDS | 45.0% | |
| AGCCTCTATTACTTCCTGGT+TGG | + | chr7.3:6229934-6229953 | MS.gene06992:CDS | 45.0% | |
| ATCATGGACTCGGAATGCAT+GGG | - | chr7.3:6227287-6227306 | None:intergenic | 45.0% | |
| ATTCAGTTCCTCCAGCCAAA+TGG | - | chr7.3:6230707-6230726 | None:intergenic | 45.0% | |
| CAGGAGTAGGGTTTAAGTGT+TGG | - | chr7.3:6226168-6226187 | None:intergenic | 45.0% | |
| CATCTCAAGAGGAGCTCATT+CGG | + | chr7.3:6229826-6229845 | MS.gene06992:CDS | 45.0% | |
| CATGAAACAAGAACGCCAGA+GGG | + | chr7.3:6228155-6228174 | MS.gene06992:CDS | 45.0% | |
| CATTGGACCTGAATCTAACC+CGG | + | chr7.3:6231291-6231310 | MS.gene06992:CDS | 45.0% | |
| CCAAAAGTAGCATCTACCAG+TGG | + | chr7.3:6229029-6229048 | MS.gene06992:CDS | 45.0% | |
| CCATAGTCTTTGTGGGCATT+AGG | - | chr7.3:6228679-6228698 | None:intergenic | 45.0% | |
| CCTAATGCCCACAAAGACTA+TGG | + | chr7.3:6228676-6228695 | MS.gene06992:intron | 45.0% | |
| CCTCTATTACTTCCTGGTTG+GGG | + | chr7.3:6229936-6229955 | MS.gene06992:CDS | 45.0% | |
| CTTCAGCGTAAAATGCAACG+TGG | + | chr7.3:6228305-6228324 | MS.gene06992:CDS | 45.0% | |
| GAAAGGTTTACCATCCTGGA+TGG | + | chr7.3:6229983-6230002 | MS.gene06992:CDS | 45.0% | |
| GAGAAGAAGCGAAAGGAAAG+AGG | + | chr7.3:6226037-6226056 | MS.gene06992:CDS | 45.0% | |
| GAGAAGCCTCTATTACTTCC+TGG | + | chr7.3:6229930-6229949 | MS.gene06992:CDS | 45.0% | |
| GAGCATCCTTTCTCTTCTTG+AGG | - | chr7.3:6230049-6230068 | None:intergenic | 45.0% | |
| GAGGGGGAGATTAAATAGAG+AGG | - | chr7.3:6227606-6227625 | None:intergenic | 45.0% | |
| GATCGTCACGAAGAGGATTA+AGG | - | chr7.3:6226813-6226832 | None:intergenic | 45.0% | |
| GATGATGAAATGCCCAAGTC+GGG | + | chr7.3:6228545-6228564 | MS.gene06992:CDS | 45.0% | |
| GCAACGTGGTTTAGATAAGC+AGG | + | chr7.3:6228319-6228338 | MS.gene06992:CDS | 45.0% | |
| GCCTCTATTACTTCCTGGTT+GGG | + | chr7.3:6229935-6229954 | MS.gene06992:CDS | 45.0% | |
| GGAAGTAATAGAGGCTTCTC+AGG | - | chr7.3:6229930-6229949 | None:intergenic | 45.0% | |
| GGGTTAGATTCAGGTCCAAT+GGG | - | chr7.3:6231292-6231311 | None:intergenic | 45.0% | |
| TAATAGAGGCTTCTCAGGCT+CGG | - | chr7.3:6229925-6229944 | None:intergenic | 45.0% | |
| TCCAAATACTCTTCTGCCAC+TGG | - | chr7.3:6229048-6229067 | None:intergenic | 45.0% | |
| TCCCACTCTGCAACAACATA+TGG | - | chr7.3:6230281-6230300 | None:intergenic | 45.0% | |
| TCTAACCCGGCAACTACATT+TGG | + | chr7.3:6231304-6231323 | MS.gene06992:CDS | 45.0% | |
| TGTATGTTCGGTTCCACTTC+TGG | + | chr7.3:6230758-6230777 | MS.gene06992:intron | 45.0% | |
| TGTTCATGCACCACTTCCAA+AGG | + | chr7.3:6226888-6226907 | MS.gene06992:CDS | 45.0% | |
| TGTTCTTTGACCATCCAGGA+TGG | - | chr7.3:6229996-6230015 | None:intergenic | 45.0% | |
| ! | CAATCTGATGATGACGACGA+CGG | + | chr7.3:6226405-6226424 | MS.gene06992:CDS | 45.0% |
| ! | GCCTTTGCTATCATTGCCTT+TGG | - | chr7.3:6231730-6231749 | None:intergenic | 45.0% |
| ! | GCTCGGGATTTTCTTCATTG+AGG | - | chr7.3:6229908-6229927 | None:intergenic | 45.0% |
| ! | GGCTTCTTCCCTTTTTCTCT+GGG | - | chr7.3:6230027-6230046 | None:intergenic | 45.0% |
| ! | TCATTCGGCAAGCTTTTGCT+GGG | + | chr7.3:6229841-6229860 | MS.gene06992:CDS | 45.0% |
| ! | TGATAGCGAGGATGACTTTG+AGG | + | chr7.3:6229133-6229152 | MS.gene06992:CDS | 45.0% |
| ! | TGCATTTTACGCTGAAGCCA+TGG | - | chr7.3:6228302-6228321 | None:intergenic | 45.0% |
| ! | TTTGTTGTGGTATAGAGGCG+TGG | + | chr7.3:6228903-6228922 | MS.gene06992:intron | 45.0% |
| !! | AAAGACACTAGAAGTGCTGG+AGG | + | chr7.3:6228520-6228539 | MS.gene06992:CDS | 45.0% |
| !! | ACCAGTGGCAGAAGAGTATT+TGG | + | chr7.3:6229044-6229063 | MS.gene06992:CDS | 45.0% |
| !! | ATTACATTGATGGCGGATGG+AGG | - | chr7.3:6227772-6227791 | None:intergenic | 45.0% |
| !! | GAATGCTGCTGATTCTGATC+CGG | + | chr7.3:6228463-6228482 | MS.gene06992:CDS | 45.0% |
| !! | GACTTTGAGGCCAAGAAAAG+TGG | + | chr7.3:6229146-6229165 | MS.gene06992:CDS | 45.0% |
| !! | TGCTGATTCTGATCCGGATA+AGG | + | chr7.3:6228469-6228488 | MS.gene06992:CDS | 45.0% |
| !!! | CCACTGGTAGATGCTACTTT+TGG | - | chr7.3:6229032-6229051 | None:intergenic | 45.0% |
| !!! | TCGTATGTAGTTTTTGGCCC+GGG | - | chr7.3:6229398-6229417 | None:intergenic | 45.0% |
| !!! | TTAATTTTTTTTTACTTTTT+CGG | + | chr7.3:6227543-6227562 | MS.gene06992:intron | 5.0% |
| AAAGGCAGATCAAGCGAAGG+TGG | + | chr7.3:6226906-6226925 | MS.gene06992:CDS | 50.0% | |
| AATAGAGGCTTCTCAGGCTC+GGG | - | chr7.3:6229924-6229943 | None:intergenic | 50.0% | |
| ACCTTCGCTTGATCTGCCTT+TGG | - | chr7.3:6226907-6226926 | None:intergenic | 50.0% | |
| AGATGAAGGCAAACGAGGAC+CGG | - | chr7.3:6226131-6226150 | None:intergenic | 50.0% | |
| ATCACTGCTGCTACTGTCCA+TGG | - | chr7.3:6228414-6228433 | None:intergenic | 50.0% | |
| CACGATGTTGTGGAAGGTGA+TGG | + | chr7.3:6226766-6226785 | MS.gene06992:CDS | 50.0% | |
| CAGAGTATGCGTATGCCCAT+TGG | + | chr7.3:6231274-6231293 | MS.gene06992:CDS | 50.0% | |
| CAGATCAAGCGAAGGTGGAA+AGG | + | chr7.3:6226911-6226930 | MS.gene06992:CDS | 50.0% | |
| CCATGAAACAAGAACGCCAG+AGG | + | chr7.3:6228154-6228173 | MS.gene06992:CDS | 50.0% | |
| CCCCAACCAGGAAGTAATAG+AGG | - | chr7.3:6229939-6229958 | None:intergenic | 50.0% | |
| CCTAGTCACGATGTTGTGGA+AGG | + | chr7.3:6226760-6226779 | MS.gene06992:CDS | 50.0% | |
| CCTTCCACAACATCGTGACT+AGG | - | chr7.3:6226763-6226782 | None:intergenic | 50.0% | |
| CGAATGAGCTCCTCTTGAGA+TGG | - | chr7.3:6229828-6229847 | None:intergenic | 50.0% | |
| CGTCACGAAGAGGATTAAGG+AGG | - | chr7.3:6226810-6226829 | None:intergenic | 50.0% | |
| CTCACGATAAACCAGAGCAG+CGG | + | chr7.3:6231670-6231689 | MS.gene06992:CDS | 50.0% | |
| CTTACTTCAGGCCGAGTAAG+AGG | - | chr7.3:6231331-6231350 | None:intergenic | 50.0% | |
| GAAGGCAGAGTCTTCTCAGT+TGG | + | chr7.3:6228101-6228120 | MS.gene06992:CDS | 50.0% | |
| GAGGTCCAAATGTAGTTGCC+GGG | - | chr7.3:6231312-6231331 | None:intergenic | 50.0% | |
| GCCTGTTAGGCACGATGTAA+AGG | + | chr7.3:6229620-6229639 | MS.gene06992:CDS | 50.0% | |
| GGGAAGTGATCATCTGCAGA+AGG | + | chr7.3:6229184-6229203 | MS.gene06992:CDS | 50.0% | |
| GTACAGAAGACAATGGTGGC+TGG | - | chr7.3:6231129-6231148 | None:intergenic | 50.0% | |
| TACTTCCTGGTTGGGGTCAA+TGG | + | chr7.3:6229943-6229962 | MS.gene06992:CDS | 50.0% | |
| TCAAGCGAAGGTGGAAAGGA+AGG | + | chr7.3:6226915-6226934 | MS.gene06992:CDS | 50.0% | |
| TCCAAAGGCAGATCAAGCGA+AGG | + | chr7.3:6226903-6226922 | MS.gene06992:CDS | 50.0% | |
| TCGTAGGCAATAAGAAGGCG+AGG | + | chr7.3:6226692-6226711 | MS.gene06992:intron | 50.0% | |
| TCTGCAGCAACAACAGCTAG+TGG | - | chr7.3:6226621-6226640 | None:intergenic | 50.0% | |
| TGAGAAGGATGGGCATAACC+AGG | + | chr7.3:6227975-6227994 | MS.gene06992:CDS | 50.0% | |
| TGATCAGGATCGTCACGAAG+AGG | - | chr7.3:6226820-6226839 | None:intergenic | 50.0% | |
| ! | AAAAGGCTTGCTCGGCATAC+CGG | - | chr7.3:6226529-6226548 | None:intergenic | 50.0% |
| ! | AACCTTGGCGGACATAACTG+AGG | + | chr7.3:6227498-6227517 | MS.gene06992:intron | 50.0% |
| ! | ATGCCGAGCAAGCCTTTTGA+TGG | + | chr7.3:6226531-6226550 | MS.gene06992:CDS | 50.0% |
| ! | CATTCGGCAAGCTTTTGCTG+GGG | + | chr7.3:6229842-6229861 | MS.gene06992:CDS | 50.0% |
| ! | CCTCTGGCGTTCTTGTTTCA+TGG | - | chr7.3:6228157-6228176 | None:intergenic | 50.0% |
| ! | CGGGTTAGATTCAGGTCCAA+TGG | - | chr7.3:6231293-6231312 | None:intergenic | 50.0% |
| ! | CTCATTCGGCAAGCTTTTGC+TGG | + | chr7.3:6229840-6229859 | MS.gene06992:CDS | 50.0% |
| ! | CTCTGATGATGATTCTGGGG+AGG | + | chr7.3:6226464-6226483 | MS.gene06992:CDS | 50.0% |
| ! | GCTTGATCTGCCTTTGGAAG+TGG | - | chr7.3:6226901-6226920 | None:intergenic | 50.0% |
| ! | GGGCTTCTTCCCTTTTTCTC+TGG | - | chr7.3:6230028-6230047 | None:intergenic | 50.0% |
| ! | GTAGTTGCCGGGTTAGATTC+AGG | - | chr7.3:6231301-6231320 | None:intergenic | 50.0% |
| ! | TGTGGTATAGAGGCGTGGAT+TGG | + | chr7.3:6228908-6228927 | MS.gene06992:intron | 50.0% |
| ! | TTTTCCGATGTGGCGGTTGT+TGG | - | chr7.3:6226068-6226087 | None:intergenic | 50.0% |
| !! | GATGAAGGACAGATGGTGGA+TGG | + | chr7.3:6229765-6229784 | MS.gene06992:CDS | 50.0% |
| !! | GGCCTCCATCTGATTTGTTG+TGG | + | chr7.3:6228890-6228909 | MS.gene06992:intron | 50.0% |
| !!! | TGCGTGTGCGTTTGGTTTTG+CGG | - | chr7.3:6231076-6231095 | None:intergenic | 50.0% |
| ACTCGGAATGCATGGGAACC+TGG | - | chr7.3:6227280-6227299 | None:intergenic | 55.0% | |
| AGACAATGGTGGCTGGCAAG+TGG | - | chr7.3:6231122-6231141 | None:intergenic | 55.0% | |
| AGCGAAGGTGGAAAGGAAGG+TGG | + | chr7.3:6226918-6226937 | MS.gene06992:CDS | 55.0% | |
| CAAACGCACACGCACTCAGT+GGG | + | chr7.3:6231082-6231101 | MS.gene06992:intron | 55.0% | |
| CTCCTCAGTTATGTCCGCCA+AGG | - | chr7.3:6227503-6227522 | None:intergenic | 55.0% | |
| GTCTACGGCTCTACGCCATT+TGG | + | chr7.3:6230689-6230708 | MS.gene06992:intron | 55.0% | |
| GTGCAGGTGGTGAAGAAACC+AGG | + | chr7.3:6231609-6231628 | MS.gene06992:intron | 55.0% | |
| TCAGTCCATTGACCCCAACC+AGG | - | chr7.3:6229951-6229970 | None:intergenic | 55.0% | |
| ! | CGCTGCTCTGGTTTATCGTG+AGG | - | chr7.3:6231672-6231691 | None:intergenic | 55.0% |
| ! | CTTGGCGGACATAACTGAGG+AGG | + | chr7.3:6227501-6227520 | MS.gene06992:intron | 55.0% |
| ! | TGGCGGATGGAGGACAATAG+CGG | - | chr7.3:6227762-6227781 | None:intergenic | 55.0% |
| ACAAGAACGCCAGAGGGCTG+AGG | + | chr7.3:6228161-6228180 | MS.gene06992:CDS | 60.0% | |
| ACACTCTGTTGCCGCTGCTC+TGG | - | chr7.3:6231684-6231703 | None:intergenic | 60.0% | |
| ACGGCTCTACGCCATTTGGC+TGG | + | chr7.3:6230693-6230712 | MS.gene06992:intron | 60.0% | |
| CCAAACGCACACGCACTCAG+TGG | + | chr7.3:6231081-6231100 | MS.gene06992:intron | 60.0% | |
| CCACTGAGTGCGTGTGCGTT+TGG | - | chr7.3:6231084-6231103 | None:intergenic | 60.0% | |
| GACGCCAACAACCGCCACAT+CGG | + | chr7.3:6226061-6226080 | MS.gene06992:CDS | 60.0% | |
| GCTCTACGCCATTTGGCTGG+AGG | + | chr7.3:6230696-6230715 | MS.gene06992:intron | 60.0% | |
| GGCTCCGCAATTTAGCAGCC+TGG | - | chr7.3:6227996-6228015 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 6226031 | 6231803 | 6226031 | ID=MS.gene06992 |
| chr7.3 | mRNA | 6226031 | 6231803 | 6226031 | ID=MS.gene06992.t1;Parent=MS.gene06992 |
| chr7.3 | exon | 6226031 | 6226318 | 6226031 | ID=MS.gene06992.t1.exon1;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6226031 | 6226318 | 6226031 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6226393 | 6226552 | 6226393 | ID=MS.gene06992.t1.exon2;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6226393 | 6226552 | 6226393 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6226698 | 6227179 | 6226698 | ID=MS.gene06992.t1.exon3;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6226698 | 6227179 | 6226698 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6227961 | 6228182 | 6227961 | ID=MS.gene06992.t1.exon4;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6227961 | 6228182 | 6227961 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6228266 | 6228589 | 6228266 | ID=MS.gene06992.t1.exon5;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6228266 | 6228589 | 6228266 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6228918 | 6229271 | 6228918 | ID=MS.gene06992.t1.exon6;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6228918 | 6229271 | 6228918 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6229371 | 6229451 | 6229371 | ID=MS.gene06992.t1.exon7;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6229371 | 6229451 | 6229371 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6229564 | 6229641 | 6229564 | ID=MS.gene06992.t1.exon8;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6229564 | 6229641 | 6229564 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6229723 | 6230109 | 6229723 | ID=MS.gene06992.t1.exon9;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6229723 | 6230109 | 6229723 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6231214 | 6231345 | 6231214 | ID=MS.gene06992.t1.exon10;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6231214 | 6231345 | 6231214 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| chr7.3 | exon | 6231615 | 6231803 | 6231615 | ID=MS.gene06992.t1.exon11;Parent=MS.gene06992.t1 |
| chr7.3 | CDS | 6231615 | 6231803 | 6231615 | ID=cds.MS.gene06992.t1;Parent=MS.gene06992.t1 |
| Gene Sequence |
| Protein sequence |
