Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072023.t1 | XP_013457978.1 | 74.8 | 715 | 161 | 5 | 81 | 776 | 162 | 876 | 6.00E-291 | 1010 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072023.t1 | P42730 | 70.8 | 712 | 189 | 6 | 81 | 776 | 162 | 870 | 6.1e-276 | 951.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072023.t1 | A0A072UQA8 | 74.8 | 715 | 161 | 5 | 81 | 776 | 162 | 876 | 4.3e-291 | 1010.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene072023 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene072023 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene072023 | 0.82819 | 1.03E-54 | -1.69E-46 |
| MS.gene050227 | MS.gene072023 | 0.818125 | 2.31E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene072023 | 0.830976 | 2.17E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene072023 | 0.816052 | 6.74E-52 | -1.69E-46 |
| MS.gene050605 | MS.gene072023 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene072023 | -0.834711 | 2.56E-56 | -1.69E-46 |
| MS.gene050642 | MS.gene072023 | 0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene072023 | 0.806229 | 9.11E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene072023 | 0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene072023 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene051452 | MS.gene072023 | 0.824729 | 6.89E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene072023 | 0.832624 | 8.50E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene072023 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene052012 | MS.gene072023 | 0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene072023 | 0.832953 | 7.04E-56 | -1.69E-46 |
| MS.gene05288 | MS.gene072023 | 0.81512 | 1.09E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene072023 | 0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene072023 | 0.827139 | 1.85E-54 | -1.69E-46 |
| MS.gene053494 | MS.gene072023 | 0.82824 | 1.00E-54 | -1.69E-46 |
| MS.gene054184 | MS.gene072023 | 0.818214 | 2.20E-52 | -1.69E-46 |
| MS.gene054185 | MS.gene072023 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene072023 | 0.810738 | 9.93E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene072023 | 0.809697 | 1.66E-50 | -1.69E-46 |
| MS.gene054658 | MS.gene072023 | 0.807875 | 4.08E-50 | -1.69E-46 |
| MS.gene05468 | MS.gene072023 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene072023 | 0.851085 | 1.12E-60 | -1.69E-46 |
| MS.gene055441 | MS.gene072023 | 0.810493 | 1.12E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene072023 | 0.810852 | 9.38E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene072023 | 0.822509 | 2.28E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene072023 | 0.850402 | 1.74E-60 | -1.69E-46 |
| MS.gene056552 | MS.gene072023 | 0.824394 | 8.26E-54 | -1.69E-46 |
| MS.gene057750 | MS.gene072023 | 0.810853 | 9.38E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene072023 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene072023 | 0.829443 | 5.13E-55 | -1.69E-46 |
| MS.gene058168 | MS.gene072023 | 0.812578 | 3.95E-51 | -1.69E-46 |
| MS.gene058435 | MS.gene072023 | 0.832095 | 1.15E-55 | -1.69E-46 |
| MS.gene058595 | MS.gene072023 | 0.838147 | 3.42E-57 | -1.69E-46 |
| MS.gene059006 | MS.gene072023 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene072023 | 0.835424 | 1.69E-56 | -1.69E-46 |
| MS.gene05979 | MS.gene072023 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene072023 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene072023 | 0.846395 | 2.23E-59 | -1.69E-46 |
| MS.gene060685 | MS.gene072023 | 0.839324 | 1.70E-57 | -1.69E-46 |
| MS.gene060802 | MS.gene072023 | 0.840499 | 8.38E-58 | -1.69E-46 |
| MS.gene060803 | MS.gene072023 | 0.826759 | 2.27E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene072023 | 0.842663 | 2.25E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072023.t1 | MTR_4g109450 | 73.735 | 731 | 169 | 6 | 65 | 776 | 150 | 876 | 0.0 | 1060 |
| MS.gene072023.t1 | MTR_7g028970 | 73.147 | 715 | 172 | 6 | 81 | 776 | 162 | 875 | 0.0 | 1013 |
| MS.gene072023.t1 | MTR_4g109450 | 73.881 | 670 | 152 | 6 | 65 | 715 | 150 | 815 | 0.0 | 965 |
| MS.gene072023.t1 | MTR_7g012820 | 48.373 | 707 | 339 | 7 | 73 | 753 | 233 | 939 | 0.0 | 639 |
| MS.gene072023.t1 | MTR_7g012820 | 48.305 | 708 | 340 | 7 | 72 | 753 | 161 | 868 | 0.0 | 637 |
| MS.gene072023.t1 | MTR_6g013660 | 48.023 | 708 | 342 | 7 | 72 | 753 | 228 | 935 | 0.0 | 637 |
| MS.gene072023.t1 | MTR_3g106160 | 46.713 | 715 | 354 | 7 | 72 | 759 | 240 | 954 | 0.0 | 609 |
| MS.gene072023.t1 | MTR_2g099075 | 64.135 | 474 | 159 | 4 | 307 | 775 | 4 | 471 | 0.0 | 590 |
| MS.gene072023.t1 | MTR_2g099075 | 65.152 | 66 | 14 | 2 | 1 | 57 | 1 | 66 | 4.02e-15 | 79.3 |
| MS.gene072023.t1 | MTR_2g006950 | 61.928 | 415 | 117 | 8 | 368 | 776 | 1 | 380 | 7.80e-160 | 477 |
| MS.gene072023.t1 | MTR_2g006950 | 68.908 | 238 | 54 | 3 | 542 | 776 | 350 | 570 | 2.40e-97 | 314 |
| MS.gene072023.t1 | MTR_3g498725 | 40.084 | 711 | 336 | 12 | 82 | 761 | 254 | 905 | 3.78e-158 | 483 |
| MS.gene072023.t1 | MTR_3g102830 | 39.324 | 740 | 355 | 13 | 59 | 761 | 228 | 910 | 1.22e-155 | 477 |
| MS.gene072023.t1 | MTR_8g100040 | 38.679 | 742 | 357 | 14 | 59 | 761 | 227 | 909 | 3.60e-155 | 476 |
| MS.gene072023.t1 | MTR_3g098310 | 37.483 | 715 | 352 | 14 | 82 | 761 | 297 | 951 | 6.99e-139 | 434 |
| MS.gene072023.t1 | MTR_3g098310 | 37.205 | 551 | 262 | 12 | 82 | 607 | 297 | 788 | 3.88e-98 | 322 |
| MS.gene072023.t1 | MTR_3g461000 | 43.168 | 322 | 174 | 4 | 438 | 752 | 427 | 746 | 4.06e-83 | 282 |
| MS.gene072023.t1 | MTR_3g461000 | 43.651 | 252 | 128 | 5 | 73 | 311 | 162 | 412 | 1.16e-48 | 185 |
| MS.gene072023.t1 | MTR_7g096480 | 63.354 | 161 | 35 | 2 | 616 | 776 | 96 | 232 | 3.74e-58 | 198 |
| MS.gene072023.t1 | MTR_7g096480 | 45.312 | 128 | 33 | 3 | 434 | 557 | 1 | 95 | 3.32e-22 | 97.1 |
| MS.gene072023.t1 | MTR_5g098360 | 63.158 | 95 | 30 | 2 | 462 | 552 | 74 | 167 | 1.03e-27 | 110 |
| MS.gene072023.t1 | MTR_1614s0010 | 36.181 | 199 | 120 | 3 | 538 | 735 | 1 | 193 | 2.48e-26 | 107 |
| MS.gene072023.t1 | MTR_6g048860 | 47.244 | 127 | 61 | 4 | 82 | 203 | 135 | 260 | 8.12e-23 | 101 |
| MS.gene072023.t1 | MTR_1g076440 | 48.837 | 86 | 44 | 0 | 531 | 616 | 158 | 243 | 1.00e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072023.t1 | AT1G74310 | 69.780 | 728 | 197 | 7 | 65 | 776 | 150 | 870 | 0.0 | 998 |
| MS.gene072023.t1 | AT1G74310 | 71.064 | 667 | 173 | 5 | 65 | 715 | 150 | 812 | 0.0 | 931 |
| MS.gene072023.t1 | AT5G15450 | 47.458 | 708 | 345 | 8 | 72 | 753 | 226 | 932 | 0.0 | 636 |
| MS.gene072023.t1 | AT2G25140 | 47.316 | 708 | 346 | 7 | 72 | 752 | 231 | 938 | 0.0 | 619 |
| MS.gene072023.t1 | AT4G14670 | 61.212 | 495 | 174 | 6 | 81 | 558 | 127 | 620 | 0.0 | 556 |
| MS.gene072023.t1 | AT5G50920 | 40.510 | 706 | 334 | 13 | 82 | 758 | 256 | 904 | 3.40e-157 | 481 |
| MS.gene072023.t1 | AT3G48870 | 40.395 | 708 | 336 | 16 | 83 | 761 | 247 | 897 | 1.14e-153 | 471 |
| MS.gene072023.t1 | AT3G48870 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.44e-153 | 471 |
| MS.gene072023.t1 | AT3G48870 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.44e-153 | 471 |
| MS.gene072023.t1 | AT3G48870 | 40.395 | 708 | 336 | 16 | 83 | 761 | 278 | 928 | 5.44e-153 | 471 |
| MS.gene072023.t1 | AT5G51070 | 35.944 | 715 | 368 | 12 | 71 | 751 | 259 | 917 | 2.09e-131 | 414 |
| MS.gene072023.t1 | AT4G14675 | 39.189 | 148 | 58 | 1 | 620 | 767 | 1 | 116 | 9.42e-31 | 119 |
| MS.gene072023.t1 | AT3G45450 | 39.459 | 185 | 84 | 5 | 95 | 267 | 151 | 319 | 1.60e-24 | 106 |
Find 168 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACCTTTCTTTATCATTT+TGG | 0.120981 | 2.4:-75752058 | None:intergenic |
| CGCAAAGCTTTGGAAATTTA+TGG | 0.135274 | 2.4:+75750487 | MS.gene072023:CDS |
| CTGCTTGAAGTCTTAAATTA+TGG | 0.168550 | 2.4:+75752708 | MS.gene072023:CDS |
| GAGAGTGAAACTTCTTTCTT+TGG | 0.210286 | 2.4:+75750165 | MS.gene072023:CDS |
| GGCTAACAACCTCAGCTATT+TGG | 0.215789 | 2.4:-75752004 | None:intergenic |
| CATCTCATAAGTGGACTTTC+AGG | 0.227432 | 2.4:+75752810 | MS.gene072023:CDS |
| GGTAAAACAGCTGTTGTTAA+AGG | 0.241250 | 2.4:+75750634 | MS.gene072023:CDS |
| AGAAGTGCAACTTTATTCTT+TGG | 0.244608 | 2.4:+75751360 | MS.gene072023:CDS |
| AGTAACAATATTGTTCTTAT+AGG | 0.275043 | 2.4:+75750598 | MS.gene072023:CDS |
| TTCACTCTCTTCCTTTCCTT+TGG | 0.285941 | 2.4:-75750151 | None:intergenic |
| GAGTGGATAGGAATACTTAT+AGG | 0.307426 | 2.4:+75750748 | MS.gene072023:CDS |
| GTGAGATCTATAGCTGGTTT+TGG | 0.315276 | 2.4:+75752143 | MS.gene072023:CDS |
| GATACGAGAGCATTAGTTTC+CGG | 0.328531 | 2.4:+75750721 | MS.gene072023:CDS |
| ACGTGATGAAGAAATAATTA+AGG | 0.328816 | 2.4:+75750555 | MS.gene072023:CDS |
| TTCCTATTCCTTGGACCAAC+TGG | 0.338075 | 2.4:+75752191 | MS.gene072023:CDS |
| AGCTGGCTAGGATGCTTATA+AGG | 0.347885 | 2.4:+75753270 | MS.gene072023:CDS |
| ATTGGTTCCTTCCTATTCCT+TGG | 0.353308 | 2.4:+75752182 | MS.gene072023:CDS |
| AGAGTGAAACTTCTTTCTTT+GGG | 0.355201 | 2.4:+75750166 | MS.gene072023:CDS |
| GGAAATTTATGGTCGAGATT+TGG | 0.362675 | 2.4:+75750498 | MS.gene072023:CDS |
| TGCTTGAAGTCTTAAATTAT+GGG | 0.364404 | 2.4:+75752709 | MS.gene072023:CDS |
| AGGAAGTGAGAAAGCATTTC+AGG | 0.372211 | 2.4:+75752871 | MS.gene072023:CDS |
| TTTGTTGTATTGTAGGAGTA+TGG | 0.377687 | 2.4:+75753203 | MS.gene072023:intron |
| AATTGAATTGTTAGGTATGT+TGG | 0.377879 | 2.4:+75752582 | MS.gene072023:intron |
| AATGATAAAGAAAGGTTGAT+TGG | 0.380463 | 2.4:+75752062 | MS.gene072023:CDS |
| CTATGTACATGTCGGACTAC+TGG | 0.383161 | 2.4:+75752282 | MS.gene072023:CDS |
| AAACAACACCTGATGAATAT+AGG | 0.391432 | 2.4:+75750911 | MS.gene072023:CDS |
| TTGTCTAGTCAGTACATATC+TGG | 0.394442 | 2.4:+75751099 | MS.gene072023:CDS |
| AACTTTATTCTTTGGAGAAA+AGG | 0.394568 | 2.4:+75751368 | MS.gene072023:CDS |
| GTAAAACAGCTGTTGTTAAA+GGG | 0.407230 | 2.4:+75750635 | MS.gene072023:CDS |
| AGTGGATAGGAATACTTATA+GGG | 0.409625 | 2.4:+75750749 | MS.gene072023:CDS |
| TTAGCCGATGGACTGGTATA+CGG | 0.410456 | 2.4:+75752021 | MS.gene072023:CDS |
| ACATATTTCCTATATTCATC+AGG | 0.416945 | 2.4:-75750919 | None:intergenic |
| ACAACCTCAGCTATTTGGTT+TGG | 0.418309 | 2.4:-75751999 | None:intergenic |
| CGAGATTTGGTTGAAGAGGC+AGG | 0.431684 | 2.4:+75750511 | MS.gene072023:CDS |
| AGGAAATTGCTATCCTCAAC+AGG | 0.434988 | 2.4:+75751323 | MS.gene072023:CDS |
| CACCAGTTGGTCCAAGGAAT+AGG | 0.436137 | 2.4:-75752193 | None:intergenic |
| TCTTCATCACGTCCGACAAC+AGG | 0.439800 | 2.4:-75750544 | None:intergenic |
| GAAGCAGGAACGCAAAGCTT+TGG | 0.443169 | 2.4:+75750477 | MS.gene072023:CDS |
| TCACTACAGCATTTATTGCT+TGG | 0.445015 | 2.4:-75752124 | None:intergenic |
| ACTAAATCAATTGCCTTGTC+AGG | 0.445782 | 2.4:-75751253 | None:intergenic |
| ACTTTATTCTTTGGAGAAAA+GGG | 0.451139 | 2.4:+75751369 | MS.gene072023:CDS |
| AAAGGGTTGGCTCAGATGAT+AGG | 0.452018 | 2.4:+75750652 | MS.gene072023:CDS |
| ACTTGAAAGGAGGTTTCAAC+AGG | 0.453211 | 2.4:+75750957 | MS.gene072023:CDS |
| TGCTGAGAAAGGCATCGCTT+TGG | 0.455960 | 2.4:+75753001 | MS.gene072023:CDS |
| GCCACAATTGTTGACTCTGC+TGG | 0.457766 | 2.4:+75752893 | MS.gene072023:CDS |
| TGAAGTTAAGTTAATTGCCT+TGG | 0.458398 | 2.4:+75750699 | MS.gene072023:CDS |
| AGCTTCTAAATGTGTGCAAA+AGG | 0.459813 | 2.4:+75750398 | MS.gene072023:CDS |
| CATACTTACATTTGCAAGAC+GGG | 0.460559 | 2.4:-75750215 | None:intergenic |
| CTCTTTCTCGCGAGCCATTG+AGG | 0.464567 | 2.4:+75752937 | MS.gene072023:CDS |
| AGATTGATTGGTGCTGCACC+AGG | 0.464646 | 2.4:+75752323 | MS.gene072023:CDS |
| AGAGATTCAGACCTACGATA+TGG | 0.469603 | 2.4:+75751891 | MS.gene072023:CDS |
| GGAAGACCTCGATATCCAAT+TGG | 0.469840 | 2.4:+75752164 | MS.gene072023:CDS |
| GTTTGCAAGGTTGCATATGA+AGG | 0.471807 | 2.4:+75752962 | MS.gene072023:CDS |
| GTTGCATTCTCTTCCTGTTG+AGG | 0.477862 | 2.4:-75751336 | None:intergenic |
| GAGATTGTTAATGCTGAAAC+GGG | 0.478591 | 2.4:+75753377 | MS.gene072023:CDS |
| TTGAGGATAGCAATTTCCTC+TGG | 0.479416 | 2.4:-75751319 | None:intergenic |
| CTCAATGGCTCGCGAGAAAG+AGG | 0.479438 | 2.4:-75752936 | None:intergenic |
| AGGAATAGGAAGGAACCAAT+TGG | 0.479821 | 2.4:-75752179 | None:intergenic |
| CACTCTGTGTCAAGATTGAT+TGG | 0.480315 | 2.4:+75752311 | MS.gene072023:CDS |
| AGAGATTGTTAATGCTGAAA+CGG | 0.482511 | 2.4:+75753376 | MS.gene072023:CDS |
| TGCTCGAGATAAAGTAATGC+AGG | 0.487062 | 2.4:+75752851 | MS.gene072023:CDS |
| ATATAGGAAATATGTGGAAA+AGG | 0.487573 | 2.4:+75750927 | MS.gene072023:CDS |
| TGAGAAAGGCATCGCTTTGG+CGG | 0.490554 | 2.4:+75753004 | MS.gene072023:CDS |
| CAGCTTGAATGTAGCACTGA+TGG | 0.492920 | 2.4:+75751945 | MS.gene072023:CDS |
| AAGAAGTGGAAGATGCTAAA+GGG | 0.493762 | 2.4:+75750791 | MS.gene072023:CDS |
| GGCAATTGATTTAGTTGATG+AGG | 0.493813 | 2.4:+75751261 | MS.gene072023:CDS |
| GGTATACGGGTGACCTGGCT+TGG | 0.494771 | 2.4:+75752035 | MS.gene072023:CDS |
| GACGATTAACTGAAGCTGTA+AGG | 0.498021 | 2.4:+75752619 | MS.gene072023:CDS |
| ATTATCATGACCTCAAACCT+TGG | 0.498059 | 2.4:+75752780 | MS.gene072023:CDS |
| AACAGCTGTTGTTAAAGGGT+TGG | 0.511916 | 2.4:+75750639 | MS.gene072023:CDS |
| AGCTTGAATGTAGCACTGAT+GGG | 0.513937 | 2.4:+75751946 | MS.gene072023:CDS |
| TTATGAGATGCTCGGATCCA+AGG | 0.515420 | 2.4:-75752797 | None:intergenic |
| GGTTGATTGGACTTGGTGAC+AGG | 0.517013 | 2.4:+75752075 | MS.gene072023:CDS |
| CTTATAGGTGAGACGGGTGT+TGG | 0.518084 | 2.4:+75750613 | MS.gene072023:CDS |
| ATTGTTCTTATAGGTGAGAC+GGG | 0.519936 | 2.4:+75750607 | MS.gene072023:CDS |
| ATTTCACCTCGATCAAACAT+AGG | 0.520140 | 2.4:-75750874 | None:intergenic |
| AAAGAAGTGGAAGATGCTAA+AGG | 0.521154 | 2.4:+75750790 | MS.gene072023:CDS |
| ACGATATGGTGCAATTGATA+AGG | 0.521944 | 2.4:+75751905 | MS.gene072023:CDS |
| AGTTTAGTAAAGAGAAAGAG+AGG | 0.523045 | 2.4:+75751784 | MS.gene072023:CDS |
| AAAGAAAGGTTGATTGGACT+TGG | 0.524278 | 2.4:+75752068 | MS.gene072023:CDS |
| GAGGTTGTTAGCCGATGGAC+TGG | 0.524764 | 2.4:+75752014 | MS.gene072023:CDS |
| AACCTTGCAAACTTCCTCAA+TGG | 0.527609 | 2.4:-75752951 | None:intergenic |
| TATGTACATGTCGGACTACT+GGG | 0.531978 | 2.4:+75752283 | MS.gene072023:CDS |
| TAGCCGATGGACTGGTATAC+GGG | 0.532823 | 2.4:+75752022 | MS.gene072023:CDS |
| ACAACGGTTTACGTTGATGC+TGG | 0.534660 | 2.4:+75753311 | MS.gene072023:CDS |
| TATACCAAACCACTTCCATT+CGG | 0.539388 | 2.4:-75753335 | None:intergenic |
| CGGAAAGAACTTGACAACTT+AGG | 0.542188 | 2.4:+75751735 | MS.gene072023:CDS |
| TACGTTGATGCTGGTCCGAA+TGG | 0.544377 | 2.4:+75753320 | MS.gene072023:CDS |
| GATACTATTAGTATACTTCG+TGG | 0.545801 | 2.4:+75751006 | MS.gene072023:CDS |
| GTTGGCTCAGATGATAGGTA+AGG | 0.546382 | 2.4:+75750657 | MS.gene072023:CDS |
| GGATCCGAGCATCTCATAAG+TGG | 0.547581 | 2.4:+75752801 | MS.gene072023:CDS |
| TGATGAATATAGGAAATATG+TGG | 0.549577 | 2.4:+75750921 | MS.gene072023:CDS |
| TGACAACTTAGGAGACAAGC+TGG | 0.549649 | 2.4:+75751746 | MS.gene072023:CDS |
| GATGCTGGTCCGAATGGAAG+TGG | 0.550560 | 2.4:+75753326 | MS.gene072023:CDS |
| TTGGCCAAAATGATAAAGAA+AGG | 0.551097 | 2.4:+75752054 | MS.gene072023:CDS |
| AGAGCTTGTCTTATCTCTTG+AGG | 0.551221 | 2.4:+75751842 | MS.gene072023:CDS |
| TATTGTTCTTATAGGTGAGA+CGG | 0.551849 | 2.4:+75750606 | MS.gene072023:CDS |
| AACTAATGCTCTCGTATCCA+AGG | 0.552086 | 2.4:-75750716 | None:intergenic |
| AATTGAACTCTAACACCAGC+AGG | 0.554311 | 2.4:-75750118 | None:intergenic |
| GAGTGAAACTTCTTTCTTTG+GGG | 0.554927 | 2.4:+75750167 | MS.gene072023:CDS |
| GGGAAACTTGATCCTGTTGT+CGG | 0.555369 | 2.4:+75750532 | MS.gene072023:CDS |
| TTCCTTGGACCAACTGGTGT+CGG | 0.556177 | 2.4:+75752197 | MS.gene072023:CDS |
| AGCCATTGAGGAAGTTTGCA+AGG | 0.558014 | 2.4:+75752949 | MS.gene072023:CDS |
| CGAGGTGAAATTAGATGCAT+CGG | 0.558598 | 2.4:+75750886 | MS.gene072023:CDS |
| GTTTCCGGTGCTGAGTGGAT+AGG | 0.559043 | 2.4:+75750736 | MS.gene072023:CDS |
| TACCGACACCAGTTGGTCCA+AGG | 0.560599 | 2.4:-75752199 | None:intergenic |
| GGACTGGTATACGGGTGACC+TGG | 0.563223 | 2.4:+75752030 | MS.gene072023:CDS |
| AGTGGAAGATGCTAAAGGGA+AGG | 0.564506 | 2.4:+75750795 | MS.gene072023:CDS |
| TAGCTGAGGTTGTTAGCCGA+TGG | 0.570098 | 2.4:+75752009 | MS.gene072023:CDS |
| TTTATCTCGAGCAACTTCCA+TGG | 0.571892 | 2.4:-75752841 | None:intergenic |
| AGGTTGCACAATATAGTTGT+GGG | 0.576981 | 2.4:+75752095 | MS.gene072023:CDS |
| TGGTCGAGATTTGGTTGAAG+AGG | 0.577488 | 2.4:+75750507 | MS.gene072023:CDS |
| AAGTCCACTTATGAGATGCT+CGG | 0.578688 | 2.4:-75752805 | None:intergenic |
| AGTTGATGAGGCTTGTGCAA+GGG | 0.584296 | 2.4:+75751273 | MS.gene072023:CDS |
| TCAATTTGATAGTCAGCCAA+AGG | 0.587091 | 2.4:+75750135 | MS.gene072023:CDS |
| TATTCCTATCCACTCAGCAC+CGG | 0.587977 | 2.4:-75750740 | None:intergenic |
| GCTGTAGTGAGATCTATAGC+TGG | 0.588552 | 2.4:+75752137 | MS.gene072023:CDS |
| GAGATTTGGTTGAAGAGGCA+GGG | 0.590390 | 2.4:+75750512 | MS.gene072023:CDS |
| AGGTAGTGTCAAAGCTGGCT+AGG | 0.590683 | 2.4:+75753258 | MS.gene072023:CDS |
| TCCAGCAGAGTCAACAATTG+TGG | 0.593158 | 2.4:-75752894 | None:intergenic |
| AGAGGATTGATGAGATTCGA+AGG | 0.595177 | 2.4:+75751802 | MS.gene072023:CDS |
| GAACAAGGTAGTGTCAAAGC+TGG | 0.596334 | 2.4:+75753253 | MS.gene072023:CDS |
| ATTTGATGATGAAAATCAGT+TGG | 0.596906 | 2.4:+75752256 | MS.gene072023:CDS |
| ATATGGTGCAATTGATAAGG+TGG | 0.598747 | 2.4:+75751908 | MS.gene072023:CDS |
| CCATACTTACATTTGCAAGA+CGG | 0.598863 | 2.4:-75750216 | None:intergenic |
| TTGATAGTCAGCCAAAGGAA+AGG | 0.601324 | 2.4:+75750140 | MS.gene072023:CDS |
| TTGAAACCTATGTTTGATCG+AGG | 0.604726 | 2.4:+75750868 | MS.gene072023:CDS |
| TAGTTGATGAGGCTTGTGCA+AGG | 0.606110 | 2.4:+75751272 | MS.gene072023:CDS |
| AGGATACAGCACTTGAAAGG+AGG | 0.606188 | 2.4:+75750947 | MS.gene072023:CDS |
| GAGAAATATGAGGTTCGTCA+TGG | 0.606189 | 2.4:+75751036 | MS.gene072023:CDS |
| TGTTAGGTATGTTGGACATG+AGG | 0.606750 | 2.4:+75752590 | MS.gene072023:intron |
| GCTTGTCTTATCTCTTGAGG+AGG | 0.607156 | 2.4:+75751845 | MS.gene072023:CDS |
| TAACTGAAGCTGTAAGGAGA+AGG | 0.608653 | 2.4:+75752625 | MS.gene072023:CDS |
| AACTTAACTTCAGCAAGACA+AGG | 0.610443 | 2.4:-75750688 | None:intergenic |
| AAAAGGATACAGCACTTGAA+AGG | 0.614212 | 2.4:+75750944 | MS.gene072023:CDS |
| CATTAGTTTCCGGTGCTGAG+TGG | 0.616510 | 2.4:+75750731 | MS.gene072023:CDS |
| ATGCTCGGATCCAAGGTTTG+AGG | 0.618309 | 2.4:-75752790 | None:intergenic |
| CGGCTGCAACAACAATTGAA+CGG | 0.618525 | 2.4:-75751074 | None:intergenic |
| TTGGCTCAGATGATAGGTAA+GGG | 0.619613 | 2.4:+75750658 | MS.gene072023:CDS |
| GGATAGGAATACTTATAGGG+AGG | 0.621133 | 2.4:+75750752 | MS.gene072023:CDS |
| TGGTCCGAATGGAAGTGGTT+TGG | 0.624698 | 2.4:+75753331 | MS.gene072023:CDS |
| CTAATAGTATCAGACACACT+AGG | 0.627045 | 2.4:-75750994 | None:intergenic |
| TGGACTACAAGAGAAATATG+AGG | 0.627910 | 2.4:+75751026 | MS.gene072023:CDS |
| TTGAAGTCTTAAATTATGGG+AGG | 0.628820 | 2.4:+75752712 | MS.gene072023:CDS |
| CTCTTGAGGAGGCTGACAGT+CGG | 0.632142 | 2.4:+75751856 | MS.gene072023:CDS |
| CAGGTTGCACAATATAGTTG+TGG | 0.632246 | 2.4:+75752094 | MS.gene072023:CDS |
| CGGTAAAACAAAACTTGCTG+AGG | 0.633195 | 2.4:+75752217 | MS.gene072023:CDS |
| TATCAATTGCACCATATCGT+AGG | 0.635478 | 2.4:-75751902 | None:intergenic |
| AGGTAAAAGATGAATCCTGC+TGG | 0.635506 | 2.4:+75750103 | None:intergenic |
| AATTATGGGAGGCTAACTGA+TGG | 0.637108 | 2.4:+75752723 | MS.gene072023:CDS |
| GCTTGAATGTAGCACTGATG+GGG | 0.639385 | 2.4:+75751947 | MS.gene072023:CDS |
| AAGGAACCAATTGGATATCG+AGG | 0.641742 | 2.4:-75752170 | None:intergenic |
| TCAACTTCATAGTCAGCCAG+AGG | 0.642623 | 2.4:+75751303 | MS.gene072023:CDS |
| AGTTGGTCCAAGGAATAGGA+AGG | 0.649213 | 2.4:-75752189 | None:intergenic |
| AGGGCGTCATCTTCCTGACA+AGG | 0.655997 | 2.4:+75751240 | MS.gene072023:intron |
| TTGATGTTGACAGACTCTGT+CGG | 0.656139 | 2.4:+75751975 | MS.gene072023:CDS |
| GGGAGGCTAACTGATGGACA+AGG | 0.656241 | 2.4:+75752729 | MS.gene072023:CDS |
| AGAAATTGATGAGAATACAA+CGG | 0.667738 | 2.4:+75753295 | MS.gene072023:CDS |
| GTTGGTGACTATGTACATGT+CGG | 0.670077 | 2.4:+75752274 | MS.gene072023:CDS |
| TATGTACTGACTAGACAACT+CGG | 0.687782 | 2.4:-75751094 | None:intergenic |
| GATTGATTGGTGCTGCACCA+GGG | 0.689462 | 2.4:+75752324 | MS.gene072023:CDS |
| AGGTATGTTGGACATGAGGA+CGG | 0.689751 | 2.4:+75752594 | MS.gene072023:intron |
| CGGACCAAACCAAATAGCTG+AGG | 0.694161 | 2.4:+75751995 | MS.gene072023:CDS |
| TGATGGACAAGGCAGAACTG+TGG | 0.696859 | 2.4:+75752740 | MS.gene072023:CDS |
| TCACCCGTATACCAGTCCAT+CGG | 0.708490 | 2.4:-75752025 | None:intergenic |
| ACTTTCAGGAAAATGTACCA+TGG | 0.708787 | 2.4:+75752824 | MS.gene072023:CDS |
| TATGTTGGACATGAGGACGG+TGG | 0.731698 | 2.4:+75752597 | MS.gene072023:CDS |
| AGATTGTTAATGCTGAAACG+GGG | 0.756258 | 2.4:+75753378 | MS.gene072023:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGATATTATAAACTTA+AGG | - | chr2.4:75751586-75751605 | None:intergenic | 10.0% |
| !!! | TTATAGTTGATATTATTTAT+AGG | + | chr2.4:75751710-75751729 | MS.gene072023:intron | 10.0% |
| !! | TAAAAGCTTAAATTAATACT+TGG | + | chr2.4:75752382-75752401 | MS.gene072023:intron | 15.0% |
| !!! | GTTTTTGTTTTAACAATTTT+AGG | + | chr2.4:75750246-75750265 | MS.gene072023:intron | 15.0% |
| !!! | TCTTTTATATTAACTATTTG+TGG | + | chr2.4:75751160-75751179 | MS.gene072023:intron | 15.0% |
| !!! | TTATATTTTTGTTGTATTGT+AGG | + | chr2.4:75753196-75753215 | MS.gene072023:intron | 15.0% |
| !!! | TTTATTTATTTTGAGTTAGT+TGG | + | chr2.4:75751680-75751699 | MS.gene072023:intron | 15.0% |
| !! | AACTGTTGATATTTATTTGT+AGG | + | chr2.4:75750345-75750364 | MS.gene072023:intron | 20.0% |
| !! | AGTAACAATATTGTTCTTAT+AGG | + | chr2.4:75750598-75750617 | MS.gene072023:CDS | 20.0% |
| !! | TATATATAAGATACACTTAC+AGG | - | chr2.4:75753074-75753093 | None:intergenic | 20.0% |
| !! | TTTCTTATAGAATAATGCTT+TGG | + | chr2.4:75753107-75753126 | MS.gene072023:intron | 20.0% |
| !!! | TTGTAACTTTTATTTCACAT+GGG | - | chr2.4:75752431-75752450 | None:intergenic | 20.0% |
| !!! | TTTGTAACTTTTATTTCACA+TGG | - | chr2.4:75752432-75752451 | None:intergenic | 20.0% |
| ! | AATTGAATTGTTAGGTATGT+TGG | + | chr2.4:75752582-75752601 | MS.gene072023:intron | 25.0% |
| ! | ACATATTTCCTATATTCATC+AGG | - | chr2.4:75750922-75750941 | None:intergenic | 25.0% |
| ! | ACGTGATGAAGAAATAATTA+AGG | + | chr2.4:75750555-75750574 | MS.gene072023:CDS | 25.0% |
| ! | AGAAATTGATGAGAATACAA+CGG | + | chr2.4:75753295-75753314 | MS.gene072023:CDS | 25.0% |
| ! | ATATAGGAAATATGTGGAAA+AGG | + | chr2.4:75750927-75750946 | MS.gene072023:CDS | 25.0% |
| ! | CTAATCTATACTATGAAGAA+AGG | - | chr2.4:75750282-75750301 | None:intergenic | 25.0% |
| ! | GATGACAAATTTGAATTAAG+AGG | - | chr2.4:75751464-75751483 | None:intergenic | 25.0% |
| ! | GTTGATATTATTTATAGGTG+CGG | + | chr2.4:75751715-75751734 | MS.gene072023:intron | 25.0% |
| ! | TCATTGTGAATTGAATTGTT+AGG | + | chr2.4:75752574-75752593 | MS.gene072023:intron | 25.0% |
| ! | TGATGAATATAGGAAATATG+TGG | + | chr2.4:75750921-75750940 | MS.gene072023:CDS | 25.0% |
| ! | TGCTTGAAGTCTTAAATTAT+GGG | + | chr2.4:75752709-75752728 | MS.gene072023:CDS | 25.0% |
| ! | TTAACTATTTGTGGATGTAT+TGG | + | chr2.4:75751169-75751188 | MS.gene072023:intron | 25.0% |
| ! | TTGATATTTATTTGTAGGTG+CGG | + | chr2.4:75750350-75750369 | MS.gene072023:intron | 25.0% |
| !! | AACTTTATTCTTTGGAGAAA+AGG | + | chr2.4:75751368-75751387 | MS.gene072023:CDS | 25.0% |
| !! | AATGATAAAGAAAGGTTGAT+TGG | + | chr2.4:75752062-75752081 | MS.gene072023:CDS | 25.0% |
| !! | ACTTTATTCTTTGGAGAAAA+GGG | + | chr2.4:75751369-75751388 | MS.gene072023:CDS | 25.0% |
| !! | TCAACCTTTCTTTATCATTT+TGG | - | chr2.4:75752061-75752080 | None:intergenic | 25.0% |
| !! | TCTCTTCATTATTTTCTACA+CGG | - | chr2.4:75753361-75753380 | None:intergenic | 25.0% |
| !!! | ATTTGATGATGAAAATCAGT+TGG | + | chr2.4:75752256-75752275 | MS.gene072023:CDS | 25.0% |
| !!! | TTGTGTTTTTTGTTTGTCAA+GGG | + | chr2.4:75751221-75751240 | MS.gene072023:intron | 25.0% |
| !!! | TTTATTTTGAGTTAGTTGGA+AGG | + | chr2.4:75751684-75751703 | MS.gene072023:intron | 25.0% |
| !!! | TTTGTGTTTTTTGTTTGTCA+AGG | + | chr2.4:75751220-75751239 | MS.gene072023:intron | 25.0% |
| AAACAACACCTGATGAATAT+AGG | + | chr2.4:75750911-75750930 | MS.gene072023:CDS | 30.0% | |
| AATTTGAATTAAGAGGTCGT+TGG | - | chr2.4:75751457-75751476 | None:intergenic | 30.0% | |
| ACTATAGTCTACACTAGAAT+TGG | - | chr2.4:75752524-75752543 | None:intergenic | 30.0% | |
| AGAGATTGTTAATGCTGAAA+CGG | + | chr2.4:75753376-75753395 | MS.gene072023:CDS | 30.0% | |
| AGAGTGAAACTTCTTTCTTT+GGG | + | chr2.4:75750166-75750185 | MS.gene072023:CDS | 30.0% | |
| AGATTAAACACACAAGTGTT+TGG | + | chr2.4:75752405-75752424 | MS.gene072023:intron | 30.0% | |
| AGTGGATAGGAATACTTATA+GGG | + | chr2.4:75750749-75750768 | MS.gene072023:CDS | 30.0% | |
| AGTTTAGTAAAGAGAAAGAG+AGG | + | chr2.4:75751784-75751803 | MS.gene072023:CDS | 30.0% | |
| CTGCTTGAAGTCTTAAATTA+TGG | + | chr2.4:75752708-75752727 | MS.gene072023:CDS | 30.0% | |
| GATACTATTAGTATACTTCG+TGG | + | chr2.4:75751006-75751025 | MS.gene072023:CDS | 30.0% | |
| GTAAAACAGCTGTTGTTAAA+GGG | + | chr2.4:75750635-75750654 | MS.gene072023:CDS | 30.0% | |
| TACAAAAAGATGTGTGCAAA+AGG | + | chr2.4:75750439-75750458 | MS.gene072023:CDS | 30.0% | |
| TATTGTTCTTATAGGTGAGA+CGG | + | chr2.4:75750606-75750625 | MS.gene072023:CDS | 30.0% | |
| TGAAGTTAAGTTAATTGCCT+TGG | + | chr2.4:75750699-75750718 | MS.gene072023:CDS | 30.0% | |
| TTGAAGTCTTAAATTATGGG+AGG | + | chr2.4:75752712-75752731 | MS.gene072023:CDS | 30.0% | |
| TTGGCCAAAATGATAAAGAA+AGG | + | chr2.4:75752054-75752073 | MS.gene072023:CDS | 30.0% | |
| ! | AAATGTCGACGTTTGAATTT+TGG | + | chr2.4:75752471-75752490 | MS.gene072023:intron | 30.0% |
| ! | AGAAGTGCAACTTTATTCTT+TGG | + | chr2.4:75751360-75751379 | MS.gene072023:CDS | 30.0% |
| ! | TTTGTTGTATTGTAGGAGTA+TGG | + | chr2.4:75753203-75753222 | MS.gene072023:intron | 30.0% |
| !! | GTGTATATGTGTTATTTCGA+TGG | + | chr2.4:75750318-75750337 | MS.gene072023:intron | 30.0% |
| !! | TAAAAAGTGGATTGAGAACA+AGG | + | chr2.4:75753238-75753257 | MS.gene072023:CDS | 30.0% |
| !!! | TTCTCAATCCACTTTTTAGT+TGG | - | chr2.4:75753236-75753255 | None:intergenic | 30.0% |
| AAAAGGATACAGCACTTGAA+AGG | + | chr2.4:75750944-75750963 | MS.gene072023:CDS | 35.0% | |
| AAAGAAGTGGAAGATGCTAA+AGG | + | chr2.4:75750790-75750809 | MS.gene072023:CDS | 35.0% | |
| AACTTAACTTCAGCAAGACA+AGG | - | chr2.4:75750691-75750710 | None:intergenic | 35.0% | |
| AAGAAGTGGAAGATGCTAAA+GGG | + | chr2.4:75750791-75750810 | MS.gene072023:CDS | 35.0% | |
| ACGATATGGTGCAATTGATA+AGG | + | chr2.4:75751905-75751924 | MS.gene072023:CDS | 35.0% | |
| ACTAAATCAATTGCCTTGTC+AGG | - | chr2.4:75751256-75751275 | None:intergenic | 35.0% | |
| ACTTTCAGGAAAATGTACCA+TGG | + | chr2.4:75752824-75752843 | MS.gene072023:CDS | 35.0% | |
| AGATTGTTAATGCTGAAACG+GGG | + | chr2.4:75753378-75753397 | MS.gene072023:CDS | 35.0% | |
| AGCTTCTAAATGTGTGCAAA+AGG | + | chr2.4:75750398-75750417 | MS.gene072023:CDS | 35.0% | |
| AGGTTGCACAATATAGTTGT+GGG | + | chr2.4:75752095-75752114 | MS.gene072023:CDS | 35.0% | |
| ATATGGTGCAATTGATAAGG+TGG | + | chr2.4:75751908-75751927 | MS.gene072023:CDS | 35.0% | |
| ATTATCATGACCTCAAACCT+TGG | + | chr2.4:75752780-75752799 | MS.gene072023:CDS | 35.0% | |
| ATTGTGCTTCTGCAATTGTA+AGG | + | chr2.4:75751606-75751625 | MS.gene072023:intron | 35.0% | |
| ATTGTTCTTATAGGTGAGAC+GGG | + | chr2.4:75750607-75750626 | MS.gene072023:CDS | 35.0% | |
| ATTTCACCTCGATCAAACAT+AGG | - | chr2.4:75750877-75750896 | None:intergenic | 35.0% | |
| ATTTGTGGATGTATTGGATG+TGG | + | chr2.4:75751175-75751194 | MS.gene072023:intron | 35.0% | |
| CATACTTACATTTGCAAGAC+GGG | - | chr2.4:75750218-75750237 | None:intergenic | 35.0% | |
| CCATACTTACATTTGCAAGA+CGG | - | chr2.4:75750219-75750238 | None:intergenic | 35.0% | |
| CTAATAGTATCAGACACACT+AGG | - | chr2.4:75750997-75751016 | None:intergenic | 35.0% | |
| GAGAGTGAAACTTCTTTCTT+TGG | + | chr2.4:75750165-75750184 | MS.gene072023:CDS | 35.0% | |
| GAGATTGTTAATGCTGAAAC+GGG | + | chr2.4:75753377-75753396 | MS.gene072023:CDS | 35.0% | |
| GAGTGAAACTTCTTTCTTTG+GGG | + | chr2.4:75750167-75750186 | MS.gene072023:CDS | 35.0% | |
| GAGTGGATAGGAATACTTAT+AGG | + | chr2.4:75750748-75750767 | MS.gene072023:CDS | 35.0% | |
| GGAAATTTATGGTCGAGATT+TGG | + | chr2.4:75750498-75750517 | MS.gene072023:CDS | 35.0% | |
| GGTAAAACAGCTGTTGTTAA+AGG | + | chr2.4:75750634-75750653 | MS.gene072023:CDS | 35.0% | |
| TATACCAAACCACTTCCATT+CGG | - | chr2.4:75753338-75753357 | None:intergenic | 35.0% | |
| TATCAATTGCACCATATCGT+AGG | - | chr2.4:75751905-75751924 | None:intergenic | 35.0% | |
| TCACTACAGCATTTATTGCT+TGG | - | chr2.4:75752127-75752146 | None:intergenic | 35.0% | |
| TGGACTACAAGAGAAATATG+AGG | + | chr2.4:75751026-75751045 | MS.gene072023:CDS | 35.0% | |
| TTGAAACCTATGTTTGATCG+AGG | + | chr2.4:75750868-75750887 | MS.gene072023:CDS | 35.0% | |
| TTGTCTAGTCAGTACATATC+TGG | + | chr2.4:75751099-75751118 | MS.gene072023:CDS | 35.0% | |
| ! | AAAGAAAGGTTGATTGGACT+TGG | + | chr2.4:75752068-75752087 | MS.gene072023:CDS | 35.0% |
| ! | GGCAATTGATTTAGTTGATG+AGG | + | chr2.4:75751261-75751280 | MS.gene072023:CDS | 35.0% |
| ! | TCAATTTGATAGTCAGCCAA+AGG | + | chr2.4:75750135-75750154 | MS.gene072023:CDS | 35.0% |
| !! | CGCAAAGCTTTGGAAATTTA+TGG | + | chr2.4:75750487-75750506 | MS.gene072023:CDS | 35.0% |
| !! | TATGTACTGACTAGACAACT+CGG | - | chr2.4:75751097-75751116 | None:intergenic | 35.0% |
| !! | TCAAAAAGTATCACACTGTG+TGG | - | chr2.4:75752651-75752670 | None:intergenic | 35.0% |
| !! | TGTGATACTTTTTGAGCAAG+TGG | + | chr2.4:75752656-75752675 | MS.gene072023:CDS | 35.0% |
| AACAGCTGTTGTTAAAGGGT+TGG | + | chr2.4:75750639-75750658 | MS.gene072023:CDS | 40.0% | |
| AACCTTGCAAACTTCCTCAA+TGG | - | chr2.4:75752954-75752973 | None:intergenic | 40.0% | |
| AACTAATGCTCTCGTATCCA+AGG | - | chr2.4:75750719-75750738 | None:intergenic | 40.0% | |
| AAGGAACCAATTGGATATCG+AGG | - | chr2.4:75752173-75752192 | None:intergenic | 40.0% | |
| AAGTCCACTTATGAGATGCT+CGG | - | chr2.4:75752808-75752827 | None:intergenic | 40.0% | |
| AATTATGGGAGGCTAACTGA+TGG | + | chr2.4:75752723-75752742 | MS.gene072023:CDS | 40.0% | |
| AATTGAACTCTAACACCAGC+AGG | - | chr2.4:75750121-75750140 | None:intergenic | 40.0% | |
| ACAACCTCAGCTATTTGGTT+TGG | - | chr2.4:75752002-75752021 | None:intergenic | 40.0% | |
| ACTTGAAAGGAGGTTTCAAC+AGG | + | chr2.4:75750957-75750976 | MS.gene072023:CDS | 40.0% | |
| AGAGATTCAGACCTACGATA+TGG | + | chr2.4:75751891-75751910 | MS.gene072023:CDS | 40.0% | |
| AGAGCTTGTCTTATCTCTTG+AGG | + | chr2.4:75751842-75751861 | MS.gene072023:CDS | 40.0% | |
| AGAGGATTGATGAGATTCGA+AGG | + | chr2.4:75751802-75751821 | MS.gene072023:CDS | 40.0% | |
| AGGAAATTGCTATCCTCAAC+AGG | + | chr2.4:75751323-75751342 | MS.gene072023:CDS | 40.0% | |
| AGGAATAGGAAGGAACCAAT+TGG | - | chr2.4:75752182-75752201 | None:intergenic | 40.0% | |
| ATGTGACAAAAACGTGAAGC+AGG | + | chr2.4:75750462-75750481 | MS.gene072023:CDS | 40.0% | |
| CACTCTGTGTCAAGATTGAT+TGG | + | chr2.4:75752311-75752330 | MS.gene072023:CDS | 40.0% | |
| CAGGTTGCACAATATAGTTG+TGG | + | chr2.4:75752094-75752113 | MS.gene072023:CDS | 40.0% | |
| CCGTCTTGCAAATGTAAGTA+TGG | + | chr2.4:75750216-75750235 | MS.gene072023:intron | 40.0% | |
| CGAGGTGAAATTAGATGCAT+CGG | + | chr2.4:75750886-75750905 | MS.gene072023:CDS | 40.0% | |
| CGGAAAGAACTTGACAACTT+AGG | + | chr2.4:75751735-75751754 | MS.gene072023:CDS | 40.0% | |
| CTTCTGCAATTGTAAGGTAG+TGG | + | chr2.4:75751612-75751631 | MS.gene072023:intron | 40.0% | |
| GACGATTAACTGAAGCTGTA+AGG | + | chr2.4:75752619-75752638 | MS.gene072023:CDS | 40.0% | |
| GAGAAATATGAGGTTCGTCA+TGG | + | chr2.4:75751036-75751055 | MS.gene072023:CDS | 40.0% | |
| GCTAACCTAATAACTTACCC+TGG | - | chr2.4:75752344-75752363 | None:intergenic | 40.0% | |
| GGATAGGAATACTTATAGGG+AGG | + | chr2.4:75750752-75750771 | MS.gene072023:CDS | 40.0% | |
| GTGCTAGACCAACTAAAAAG+TGG | + | chr2.4:75753225-75753244 | MS.gene072023:CDS | 40.0% | |
| GTTTGCAAGGTTGCATATGA+AGG | + | chr2.4:75752962-75752981 | MS.gene072023:CDS | 40.0% | |
| TAACTGAAGCTGTAAGGAGA+AGG | + | chr2.4:75752625-75752644 | MS.gene072023:CDS | 40.0% | |
| TATGTACATGTCGGACTACT+GGG | + | chr2.4:75752283-75752302 | MS.gene072023:CDS | 40.0% | |
| TGCTCGAGATAAAGTAATGC+AGG | + | chr2.4:75752851-75752870 | MS.gene072023:CDS | 40.0% | |
| TGTTAGGTATGTTGGACATG+AGG | + | chr2.4:75752590-75752609 | MS.gene072023:intron | 40.0% | |
| TTCACTCTCTTCCTTTCCTT+TGG | - | chr2.4:75750154-75750173 | None:intergenic | 40.0% | |
| TTGAGGATAGCAATTTCCTC+TGG | - | chr2.4:75751322-75751341 | None:intergenic | 40.0% | |
| TTGATGTTGACAGACTCTGT+CGG | + | chr2.4:75751975-75751994 | MS.gene072023:CDS | 40.0% | |
| TTGGCTCAGATGATAGGTAA+GGG | + | chr2.4:75750658-75750677 | MS.gene072023:CDS | 40.0% | |
| TTTATCTCGAGCAACTTCCA+TGG | - | chr2.4:75752844-75752863 | None:intergenic | 40.0% | |
| ! | AAGGCAGAACTGTGGATTTT+AGG | + | chr2.4:75752748-75752767 | MS.gene072023:CDS | 40.0% |
| ! | ATTGGTTCCTTCCTATTCCT+TGG | + | chr2.4:75752182-75752201 | MS.gene072023:CDS | 40.0% |
| ! | CATCTCATAAGTGGACTTTC+AGG | + | chr2.4:75752810-75752829 | MS.gene072023:CDS | 40.0% |
| ! | GCTAATCGTTTTGCTGAGAA+AGG | + | chr2.4:75752990-75753009 | MS.gene072023:CDS | 40.0% |
| ! | GTATTGGATGTGGATGGTTT+TGG | + | chr2.4:75751185-75751204 | MS.gene072023:intron | 40.0% |
| ! | TTGATAGTCAGCCAAAGGAA+AGG | + | chr2.4:75750140-75750159 | MS.gene072023:CDS | 40.0% |
| !! | AGCTTGAATGTAGCACTGAT+GGG | + | chr2.4:75751946-75751965 | MS.gene072023:CDS | 40.0% |
| !! | AGGAAGTGAGAAAGCATTTC+AGG | + | chr2.4:75752871-75752890 | MS.gene072023:CDS | 40.0% |
| !! | CGGTAAAACAAAACTTGCTG+AGG | + | chr2.4:75752217-75752236 | MS.gene072023:CDS | 40.0% |
| !! | GATACGAGAGCATTAGTTTC+CGG | + | chr2.4:75750721-75750740 | MS.gene072023:CDS | 40.0% |
| !! | GTGAGATCTATAGCTGGTTT+TGG | + | chr2.4:75752143-75752162 | MS.gene072023:CDS | 40.0% |
| !! | GTTGGTGACTATGTACATGT+CGG | + | chr2.4:75752274-75752293 | MS.gene072023:CDS | 40.0% |
| !! | TTTATCATTTTGGCCAAGCC+AGG | - | chr2.4:75752051-75752070 | None:intergenic | 40.0% |
| !!! | GAACGCTGTTTTGAAAGAAG+TGG | + | chr2.4:75750777-75750796 | MS.gene072023:CDS | 40.0% |
| !!! | TTTGTTTTACCGACACCAGT+TGG | - | chr2.4:75752209-75752228 | None:intergenic | 40.0% |
| ACAACGGTTTACGTTGATGC+TGG | + | chr2.4:75753311-75753330 | MS.gene072023:CDS | 45.0% | |
| AGCCATTGAGGAAGTTTGCA+AGG | + | chr2.4:75752949-75752968 | MS.gene072023:CDS | 45.0% | |
| AGCTGGCTAGGATGCTTATA+AGG | + | chr2.4:75753270-75753289 | MS.gene072023:CDS | 45.0% | |
| AGGATACAGCACTTGAAAGG+AGG | + | chr2.4:75750947-75750966 | MS.gene072023:CDS | 45.0% | |
| AGGTATGTTGGACATGAGGA+CGG | + | chr2.4:75752594-75752613 | MS.gene072023:intron | 45.0% | |
| AGTGGAAGATGCTAAAGGGA+AGG | + | chr2.4:75750795-75750814 | MS.gene072023:CDS | 45.0% | |
| AGTTGGTCCAAGGAATAGGA+AGG | - | chr2.4:75752192-75752211 | None:intergenic | 45.0% | |
| CGGCTGCAACAACAATTGAA+CGG | - | chr2.4:75751077-75751096 | None:intergenic | 45.0% | |
| CTATGTACATGTCGGACTAC+TGG | + | chr2.4:75752282-75752301 | MS.gene072023:CDS | 45.0% | |
| CTGCACCAGGGTAAGTTATT+AGG | + | chr2.4:75752336-75752355 | MS.gene072023:intron | 45.0% | |
| GAACAAGGTAGTGTCAAAGC+TGG | + | chr2.4:75753253-75753272 | MS.gene072023:CDS | 45.0% | |
| GCTGTAGTGAGATCTATAGC+TGG | + | chr2.4:75752137-75752156 | MS.gene072023:CDS | 45.0% | |
| GCTTGTCTTATCTCTTGAGG+AGG | + | chr2.4:75751845-75751864 | MS.gene072023:CDS | 45.0% | |
| GGAAGACCTCGATATCCAAT+TGG | + | chr2.4:75752164-75752183 | MS.gene072023:CDS | 45.0% | |
| GGCTAACAACCTCAGCTATT+TGG | - | chr2.4:75752007-75752026 | None:intergenic | 45.0% | |
| GGGAAACTTGATCCTGTTGT+CGG | + | chr2.4:75750532-75750551 | MS.gene072023:CDS | 45.0% | |
| GTGGATGTATTGGATGTGGA+TGG | + | chr2.4:75751179-75751198 | MS.gene072023:intron | 45.0% | |
| GTTGCATTCTCTTCCTGTTG+AGG | - | chr2.4:75751339-75751358 | None:intergenic | 45.0% | |
| TATTCCTATCCACTCAGCAC+CGG | - | chr2.4:75750743-75750762 | None:intergenic | 45.0% | |
| TCAACTTCATAGTCAGCCAG+AGG | + | chr2.4:75751303-75751322 | MS.gene072023:CDS | 45.0% | |
| TCCAGCAGAGTCAACAATTG+TGG | - | chr2.4:75752897-75752916 | None:intergenic | 45.0% | |
| TGACAACTTAGGAGACAAGC+TGG | + | chr2.4:75751746-75751765 | MS.gene072023:CDS | 45.0% | |
| TTATGAGATGCTCGGATCCA+AGG | - | chr2.4:75752800-75752819 | None:intergenic | 45.0% | |
| TTCCTATTCCTTGGACCAAC+TGG | + | chr2.4:75752191-75752210 | MS.gene072023:CDS | 45.0% | |
| ! | CAGCTTGAATGTAGCACTGA+TGG | + | chr2.4:75751945-75751964 | MS.gene072023:CDS | 45.0% |
| ! | GAGATTTGGTTGAAGAGGCA+GGG | + | chr2.4:75750512-75750531 | MS.gene072023:CDS | 45.0% |
| ! | GTTGGCTCAGATGATAGGTA+AGG | + | chr2.4:75750657-75750676 | MS.gene072023:CDS | 45.0% |
| ! | TGGTCGAGATTTGGTTGAAG+AGG | + | chr2.4:75750507-75750526 | MS.gene072023:CDS | 45.0% |
| !! | AAAGGGTTGGCTCAGATGAT+AGG | + | chr2.4:75750652-75750671 | MS.gene072023:CDS | 45.0% |
| !! | AGTTGATGAGGCTTGTGCAA+GGG | + | chr2.4:75751273-75751292 | MS.gene072023:CDS | 45.0% |
| !! | GCTTGAATGTAGCACTGATG+GGG | + | chr2.4:75751947-75751966 | MS.gene072023:CDS | 45.0% |
| !! | TAGTTGATGAGGCTTGTGCA+AGG | + | chr2.4:75751272-75751291 | MS.gene072023:CDS | 45.0% |
| !! | TTAGCCGATGGACTGGTATA+CGG | + | chr2.4:75752021-75752040 | MS.gene072023:CDS | 45.0% |
| AGGTAGTGTCAAAGCTGGCT+AGG | + | chr2.4:75753258-75753277 | MS.gene072023:CDS | 50.0% | |
| ATGCTCGGATCCAAGGTTTG+AGG | - | chr2.4:75752793-75752812 | None:intergenic | 50.0% | |
| CACCAGTTGGTCCAAGGAAT+AGG | - | chr2.4:75752196-75752215 | None:intergenic | 50.0% | |
| CGGACCAAACCAAATAGCTG+AGG | + | chr2.4:75751995-75752014 | MS.gene072023:CDS | 50.0% | |
| CTTATAGGTGAGACGGGTGT+TGG | + | chr2.4:75750613-75750632 | MS.gene072023:CDS | 50.0% | |
| GAAGCAGGAACGCAAAGCTT+TGG | + | chr2.4:75750477-75750496 | MS.gene072023:CDS | 50.0% | |
| GGATCCGAGCATCTCATAAG+TGG | + | chr2.4:75752801-75752820 | MS.gene072023:CDS | 50.0% | |
| TACGTTGATGCTGGTCCGAA+TGG | + | chr2.4:75753320-75753339 | MS.gene072023:CDS | 50.0% | |
| TAGCTGAGGTTGTTAGCCGA+TGG | + | chr2.4:75752009-75752028 | MS.gene072023:CDS | 50.0% | |
| TATGTTGGACATGAGGACGG+TGG | + | chr2.4:75752597-75752616 | MS.gene072023:CDS | 50.0% | |
| TCACCCGTATACCAGTCCAT+CGG | - | chr2.4:75752028-75752047 | None:intergenic | 50.0% | |
| TCTTCATCACGTCCGACAAC+AGG | - | chr2.4:75750547-75750566 | None:intergenic | 50.0% | |
| TGGTCCGAATGGAAGTGGTT+TGG | + | chr2.4:75753331-75753350 | MS.gene072023:CDS | 50.0% | |
| TTCCTTGGACCAACTGGTGT+CGG | + | chr2.4:75752197-75752216 | MS.gene072023:CDS | 50.0% | |
| ! | CATTAGTTTCCGGTGCTGAG+TGG | + | chr2.4:75750731-75750750 | MS.gene072023:CDS | 50.0% |
| ! | CGAGATTTGGTTGAAGAGGC+AGG | + | chr2.4:75750511-75750530 | MS.gene072023:CDS | 50.0% |
| ! | TGATGGACAAGGCAGAACTG+TGG | + | chr2.4:75752740-75752759 | MS.gene072023:CDS | 50.0% |
| !! | AGATTGATTGGTGCTGCACC+AGG | + | chr2.4:75752323-75752342 | MS.gene072023:CDS | 50.0% |
| !! | GATTGATTGGTGCTGCACCA+GGG | + | chr2.4:75752324-75752343 | MS.gene072023:CDS | 50.0% |
| !! | GCCACAATTGTTGACTCTGC+TGG | + | chr2.4:75752893-75752912 | MS.gene072023:CDS | 50.0% |
| !! | GGTTGATTGGACTTGGTGAC+AGG | + | chr2.4:75752075-75752094 | MS.gene072023:CDS | 50.0% |
| !! | TAGCCGATGGACTGGTATAC+GGG | + | chr2.4:75752022-75752041 | MS.gene072023:CDS | 50.0% |
| !! | TGAGAAAGGCATCGCTTTGG+CGG | + | chr2.4:75753004-75753023 | MS.gene072023:CDS | 50.0% |
| !! | TGCTGAGAAAGGCATCGCTT+TGG | + | chr2.4:75753001-75753020 | MS.gene072023:CDS | 50.0% |
| CTCAATGGCTCGCGAGAAAG+AGG | - | chr2.4:75752939-75752958 | None:intergenic | 55.0% | |
| CTCTTGAGGAGGCTGACAGT+CGG | + | chr2.4:75751856-75751875 | MS.gene072023:CDS | 55.0% | |
| CTCTTTCTCGCGAGCCATTG+AGG | + | chr2.4:75752937-75752956 | MS.gene072023:CDS | 55.0% | |
| GAGGTTGTTAGCCGATGGAC+TGG | + | chr2.4:75752014-75752033 | MS.gene072023:CDS | 55.0% | |
| GATGCTGGTCCGAATGGAAG+TGG | + | chr2.4:75753326-75753345 | MS.gene072023:CDS | 55.0% | |
| TACCGACACCAGTTGGTCCA+AGG | - | chr2.4:75752202-75752221 | None:intergenic | 55.0% | |
| ! | AGGGCGTCATCTTCCTGACA+AGG | + | chr2.4:75751240-75751259 | MS.gene072023:intron | 55.0% |
| ! | GGGAGGCTAACTGATGGACA+AGG | + | chr2.4:75752729-75752748 | MS.gene072023:CDS | 55.0% |
| ! | GTTTCCGGTGCTGAGTGGAT+AGG | + | chr2.4:75750736-75750755 | MS.gene072023:CDS | 55.0% |
| GGTATACGGGTGACCTGGCT+TGG | + | chr2.4:75752035-75752054 | MS.gene072023:CDS | 60.0% | |
| ! | GGACTGGTATACGGGTGACC+TGG | + | chr2.4:75752030-75752049 | MS.gene072023:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 75750112 | 75753403 | 75750112 | ID=MS.gene072023 |
| chr2.4 | mRNA | 75750112 | 75753403 | 75750112 | ID=MS.gene072023.t1;Parent=MS.gene072023 |
| chr2.4 | exon | 75750112 | 75750228 | 75750112 | ID=MS.gene072023.t1.exon1;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75750112 | 75750228 | 75750112 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| chr2.4 | exon | 75750367 | 75751120 | 75750367 | ID=MS.gene072023.t1.exon2;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75750367 | 75751120 | 75750367 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| chr2.4 | exon | 75751242 | 75751423 | 75751242 | ID=MS.gene072023.t1.exon3;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75751242 | 75751423 | 75751242 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| chr2.4 | exon | 75751732 | 75752345 | 75751732 | ID=MS.gene072023.t1.exon4;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75751732 | 75752345 | 75751732 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| chr2.4 | exon | 75752596 | 75753073 | 75752596 | ID=MS.gene072023.t1.exon5;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75752596 | 75753073 | 75752596 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| chr2.4 | exon | 75753218 | 75753403 | 75753218 | ID=MS.gene072023.t1.exon6;Parent=MS.gene072023.t1 |
| chr2.4 | CDS | 75753218 | 75753403 | 75753218 | ID=cds.MS.gene072023.t1;Parent=MS.gene072023.t1 |
| Gene Sequence |
| Protein sequence |
