Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08365.t1 | RHN42312.1 | 98.6 | 421 | 6 | 0 | 1 | 421 | 1 | 421 | 1.30E-202 | 715.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08365.t1 | Q9C9X7 | 49.6 | 409 | 152 | 8 | 27 | 419 | 41 | 411 | 7.0e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08365.t1 | A0A396GMJ1 | 98.6 | 421 | 6 | 0 | 1 | 421 | 1 | 421 | 9.2e-203 | 715.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene08365.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene08365 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene08365 | 0.81076 | 9.82E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene08365 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene08365 | 0.81602 | 6.86E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene08365 | 0.832476 | 9.25E-56 | -1.69E-46 |
| MS.gene049873 | MS.gene08365 | 0.815544 | 8.76E-52 | -1.69E-46 |
| MS.gene050020 | MS.gene08365 | 0.803821 | 2.90E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene08365 | 0.803161 | 3.98E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene08365 | 0.803156 | 3.99E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene08365 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene08365 | 0.802467 | 5.53E-49 | -1.69E-46 |
| MS.gene050844 | MS.gene08365 | 0.808413 | 3.13E-50 | -1.69E-46 |
| MS.gene050959 | MS.gene08365 | 0.803072 | 4.15E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene08365 | 0.843696 | 1.20E-58 | -1.69E-46 |
| MS.gene051265 | MS.gene08365 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene051388 | MS.gene08365 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene08365 | 0.842401 | 2.65E-58 | -1.69E-46 |
| MS.gene051719 | MS.gene08365 | 0.849396 | 3.32E-60 | -1.69E-46 |
| MS.gene051720 | MS.gene08365 | 0.860668 | 1.76E-63 | -1.69E-46 |
| MS.gene051744 | MS.gene08365 | 0.802915 | 4.47E-49 | -1.69E-46 |
| MS.gene052020 | MS.gene08365 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene08365 | 0.810059 | 1.39E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene08365 | 0.80414 | 2.49E-49 | -1.69E-46 |
| MS.gene052561 | MS.gene08365 | 0.800128 | 1.67E-48 | -1.69E-46 |
| MS.gene052584 | MS.gene08365 | 0.813504 | 2.48E-51 | -1.69E-46 |
| MS.gene052613 | MS.gene08365 | 0.842843 | 2.02E-58 | -1.69E-46 |
| MS.gene052665 | MS.gene08365 | 0.812921 | 3.32E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene08365 | 0.804588 | 2.01E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene08365 | 0.834713 | 2.56E-56 | -1.69E-46 |
| MS.gene053054 | MS.gene08365 | -0.812235 | 4.70E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene08365 | 0.811131 | 8.16E-51 | -1.69E-46 |
| MS.gene053221 | MS.gene08365 | 0.858604 | 7.35E-63 | -1.69E-46 |
| MS.gene053226 | MS.gene08365 | 0.832787 | 7.75E-56 | -1.69E-46 |
| MS.gene053883 | MS.gene08365 | 0.801201 | 1.01E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene08365 | 0.817177 | 3.77E-52 | -1.69E-46 |
| MS.gene054967 | MS.gene08365 | 0.823418 | 1.40E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene08365 | 0.819848 | 9.36E-53 | -1.69E-46 |
| MS.gene055465 | MS.gene08365 | 0.850394 | 1.75E-60 | -1.69E-46 |
| MS.gene055466 | MS.gene08365 | 0.865344 | 6.32E-65 | -1.69E-46 |
| MS.gene055468 | MS.gene08365 | 0.857931 | 1.17E-62 | -1.69E-46 |
| MS.gene055537 | MS.gene08365 | 0.820402 | 6.99E-53 | -1.69E-46 |
| MS.gene055580 | MS.gene08365 | -0.826045 | 3.37E-54 | -1.69E-46 |
| MS.gene055608 | MS.gene08365 | 0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene08365 | 0.821254 | 4.45E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene08365 | 0.82155 | 3.80E-53 | -1.69E-46 |
| MS.gene056043 | MS.gene08365 | -0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene056366 | MS.gene08365 | 0.807115 | 5.92E-50 | -1.69E-46 |
| MS.gene056542 | MS.gene08365 | 0.802496 | 5.46E-49 | -1.69E-46 |
| MS.gene056543 | MS.gene08365 | 0.80083 | 1.20E-48 | -1.69E-46 |
| MS.gene056545 | MS.gene08365 | 0.811234 | 7.75E-51 | -1.69E-46 |
| MS.gene056553 | MS.gene08365 | 0.830977 | 2.17E-55 | -1.69E-46 |
| MS.gene056642 | MS.gene08365 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene057060 | MS.gene08365 | 0.803018 | 4.26E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene08365 | 0.82231 | 2.54E-53 | -1.69E-46 |
| MS.gene058037 | MS.gene08365 | 0.813066 | 3.09E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene08365 | 0.817696 | 2.89E-52 | -1.69E-46 |
| MS.gene058625 | MS.gene08365 | 0.83323 | 6.01E-56 | -1.69E-46 |
| MS.gene058636 | MS.gene08365 | 0.812954 | 3.27E-51 | -1.69E-46 |
| MS.gene058829 | MS.gene08365 | 0.80966 | 1.70E-50 | -1.69E-46 |
| MS.gene059084 | MS.gene08365 | 0.822287 | 2.57E-53 | -1.69E-46 |
| MS.gene05954 | MS.gene08365 | 0.82791 | 1.20E-54 | -1.69E-46 |
| MS.gene059625 | MS.gene08365 | 0.813975 | 1.95E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene08365 | 0.805016 | 1.64E-49 | -1.69E-46 |
| MS.gene059937 | MS.gene08365 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene060137 | MS.gene08365 | -0.801467 | 8.88E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene08365 | 0.838852 | 2.25E-57 | -1.69E-46 |
| MS.gene060572 | MS.gene08365 | 0.805418 | 1.35E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene08365 | 0.825224 | 5.27E-54 | -1.69E-46 |
| MS.gene060634 | MS.gene08365 | -0.801594 | 8.36E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08365 | MS.gene02469 | PPI |
| MS.gene30433 | MS.gene08365 | PPI |
| MS.gene08365 | MS.gene23196 | PPI |
| MS.gene26532 | MS.gene08365 | PPI |
| MS.gene47479 | MS.gene08365 | PPI |
| MS.gene008767 | MS.gene08365 | PPI |
| MS.gene08365 | MS.gene043662 | PPI |
| MS.gene08365 | MS.gene39623 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08365.t1 | MTR_1g112270 | 45.669 | 254 | 133 | 4 | 30 | 280 | 47 | 298 | 8.28e-73 | 238 |
| MS.gene08365.t1 | MTR_8g017210 | 64.103 | 156 | 54 | 2 | 27 | 182 | 62 | 215 | 6.50e-72 | 235 |
| MS.gene08365.t1 | MTR_2g099990 | 63.462 | 156 | 55 | 2 | 27 | 182 | 46 | 199 | 4.21e-71 | 231 |
| MS.gene08365.t1 | MTR_2g093960 | 62.179 | 156 | 58 | 1 | 27 | 182 | 32 | 186 | 5.79e-71 | 229 |
| MS.gene08365.t1 | MTR_1g016010 | 62.025 | 158 | 59 | 1 | 27 | 184 | 41 | 197 | 9.03e-71 | 230 |
| MS.gene08365.t1 | MTR_1g112270 | 45.528 | 246 | 129 | 4 | 38 | 280 | 66 | 309 | 1.48e-69 | 230 |
| MS.gene08365.t1 | MTR_1g094115 | 60.897 | 156 | 59 | 2 | 27 | 182 | 47 | 200 | 5.42e-69 | 228 |
| MS.gene08365.t1 | MTR_4g059870 | 60.256 | 156 | 61 | 1 | 27 | 182 | 38 | 192 | 5.52e-69 | 226 |
| MS.gene08365.t1 | MTR_2g090745 | 57.407 | 162 | 67 | 2 | 35 | 196 | 15 | 174 | 1.51e-63 | 211 |
| MS.gene08365.t1 | MTR_2g099990 | 63.636 | 132 | 46 | 2 | 51 | 182 | 1 | 130 | 8.16e-59 | 197 |
| MS.gene08365.t1 | MTR_1g094115 | 53.205 | 156 | 54 | 3 | 27 | 182 | 47 | 183 | 2.11e-54 | 189 |
| MS.gene08365.t1 | MTR_2g017720 | 54.887 | 133 | 53 | 2 | 20 | 152 | 306 | 431 | 2.35e-39 | 146 |
| MS.gene08365.t1 | MTR_3g102000 | 46.565 | 131 | 58 | 5 | 27 | 150 | 6 | 131 | 1.75e-26 | 106 |
| MS.gene08365.t1 | MTR_5g030560 | 64.444 | 45 | 16 | 0 | 37 | 81 | 16 | 60 | 2.42e-16 | 73.9 |
| MS.gene08365.t1 | MTR_4g103250 | 34.884 | 86 | 56 | 0 | 311 | 396 | 58 | 143 | 1.18e-14 | 71.2 |
| MS.gene08365.t1 | MTR_1g093095 | 27.374 | 179 | 114 | 6 | 15 | 181 | 74 | 248 | 3.25e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08365.t1 | AT2G01940 | 57.482 | 421 | 151 | 9 | 17 | 421 | 34 | 442 | 1.48e-164 | 470 |
| MS.gene08365.t1 | AT2G01940 | 56.738 | 423 | 152 | 11 | 17 | 421 | 34 | 443 | 4.69e-159 | 456 |
| MS.gene08365.t1 | AT1G68130 | 57.108 | 408 | 136 | 9 | 21 | 419 | 34 | 411 | 1.53e-149 | 431 |
| MS.gene08365.t1 | AT1G25250 | 53.613 | 429 | 138 | 10 | 3 | 421 | 8 | 385 | 4.01e-145 | 418 |
| MS.gene08365.t1 | AT1G25250 | 54.061 | 394 | 121 | 9 | 37 | 421 | 20 | 362 | 1.78e-134 | 390 |
| MS.gene08365.t1 | AT2G01940 | 54.247 | 365 | 139 | 9 | 73 | 421 | 1 | 353 | 5.38e-127 | 371 |
| MS.gene08365.t1 | AT1G68130 | 52.394 | 355 | 131 | 8 | 73 | 419 | 1 | 325 | 6.79e-113 | 334 |
| MS.gene08365.t1 | AT1G25250 | 49.721 | 358 | 120 | 9 | 73 | 421 | 1 | 307 | 8.54e-106 | 315 |
| MS.gene08365.t1 | AT3G50700 | 56.757 | 185 | 74 | 3 | 2 | 182 | 5 | 187 | 6.26e-72 | 233 |
| MS.gene08365.t1 | AT5G66730 | 57.219 | 187 | 68 | 4 | 2 | 182 | 5 | 185 | 8.19e-71 | 231 |
| MS.gene08365.t1 | AT4G02670 | 49.569 | 232 | 95 | 4 | 27 | 243 | 55 | 279 | 2.35e-70 | 228 |
| MS.gene08365.t1 | AT4G02670 | 49.569 | 232 | 95 | 4 | 27 | 243 | 53 | 277 | 2.37e-70 | 228 |
| MS.gene08365.t1 | AT3G45260 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 6.96e-70 | 228 |
| MS.gene08365.t1 | AT3G45260 | 55.747 | 174 | 76 | 1 | 27 | 200 | 39 | 211 | 6.96e-70 | 228 |
| MS.gene08365.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene08365.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene08365.t1 | AT1G55110 | 61.538 | 156 | 59 | 1 | 27 | 182 | 63 | 217 | 1.17e-69 | 227 |
| MS.gene08365.t1 | AT5G60470 | 54.645 | 183 | 82 | 1 | 27 | 209 | 44 | 225 | 1.89e-69 | 227 |
| MS.gene08365.t1 | AT5G60470 | 54.645 | 183 | 82 | 1 | 27 | 209 | 40 | 221 | 2.43e-69 | 226 |
| MS.gene08365.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 51 | 205 | 2.69e-69 | 227 |
| MS.gene08365.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 65 | 219 | 3.67e-69 | 228 |
| MS.gene08365.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene08365.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene08365.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene08365.t1 | AT2G02080 | 55.307 | 179 | 75 | 3 | 27 | 202 | 54 | 230 | 3.70e-69 | 228 |
| MS.gene08365.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.83e-69 | 228 |
| MS.gene08365.t1 | AT3G13810 | 62.821 | 156 | 57 | 1 | 27 | 182 | 70 | 224 | 3.83e-69 | 228 |
| MS.gene08365.t1 | AT5G03150 | 61.538 | 156 | 59 | 1 | 27 | 182 | 53 | 207 | 5.60e-69 | 227 |
| MS.gene08365.t1 | AT1G03840 | 63.462 | 156 | 55 | 2 | 27 | 182 | 41 | 194 | 2.40e-68 | 225 |
| MS.gene08365.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 3.22e-68 | 224 |
| MS.gene08365.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 53 | 206 | 3.22e-68 | 224 |
| MS.gene08365.t1 | AT1G14580 | 58.974 | 156 | 62 | 2 | 27 | 182 | 67 | 220 | 4.73e-68 | 224 |
| MS.gene08365.t1 | AT2G02070 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.11e-67 | 226 |
| MS.gene08365.t1 | AT2G02070 | 61.538 | 156 | 58 | 2 | 27 | 182 | 52 | 205 | 1.11e-67 | 226 |
| MS.gene08365.t1 | AT5G44160 | 49.302 | 215 | 97 | 5 | 27 | 236 | 37 | 244 | 1.71e-66 | 219 |
| MS.gene08365.t1 | AT5G60470 | 54.651 | 172 | 77 | 1 | 38 | 209 | 46 | 216 | 5.90e-65 | 215 |
| MS.gene08365.t1 | AT3G13810 | 64.138 | 145 | 51 | 1 | 38 | 182 | 68 | 211 | 6.84e-65 | 216 |
| MS.gene08365.t1 | AT1G03840 | 62.179 | 156 | 55 | 3 | 27 | 182 | 41 | 192 | 9.45e-65 | 216 |
| MS.gene08365.t1 | AT3G13810 | 64.138 | 145 | 51 | 1 | 38 | 182 | 82 | 225 | 9.58e-65 | 216 |
| MS.gene08365.t1 | AT5G44160 | 49.268 | 205 | 92 | 5 | 37 | 236 | 8 | 205 | 3.94e-63 | 209 |
| MS.gene08365.t1 | AT2G02080 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 1.76e-56 | 192 |
| MS.gene08365.t1 | AT2G02080 | 53.205 | 156 | 68 | 3 | 51 | 203 | 1 | 154 | 1.76e-56 | 192 |
| MS.gene08365.t1 | AT5G22890 | 31.138 | 167 | 101 | 5 | 25 | 178 | 186 | 351 | 7.15e-17 | 82.0 |
| MS.gene08365.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 14 | 203 | 1.31e-16 | 80.1 |
| MS.gene08365.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.97e-16 | 81.6 |
| MS.gene08365.t1 | AT1G34370 | 29.231 | 195 | 119 | 7 | 36 | 216 | 224 | 413 | 1.97e-16 | 81.6 |
| MS.gene08365.t1 | AT3G48550 | 31.034 | 174 | 87 | 6 | 226 | 393 | 11 | 157 | 1.90e-15 | 73.9 |
| MS.gene08365.t1 | AT3G57670 | 30.986 | 142 | 87 | 5 | 48 | 181 | 209 | 347 | 4.22e-12 | 67.8 |
Find 74 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATGCATTTGAAGATTC+TGG | 0.162069 | 4.1:-17147620 | None:intergenic |
| CAGTTTCAATCTTCAACTTC+TGG | 0.249687 | 4.1:+17149867 | MS.gene08365:CDS |
| AATGGTTTATCAGGTGGTTT+TGG | 0.294809 | 4.1:-17149384 | None:intergenic |
| TTGAGTTTGAAAATGCTAAA+AGG | 0.314430 | 4.1:+17149733 | MS.gene08365:CDS |
| AGAAGAAACATCCATTGTTA+TGG | 0.316252 | 4.1:+17149899 | MS.gene08365:CDS |
| TCTGATTCTAACAAAGTCTT+TGG | 0.339052 | 4.1:-17147555 | None:intergenic |
| CTAAAATTTGCCTCACTAGA+TGG | 0.342793 | 4.1:-17149327 | None:intergenic |
| GCACTGGTAATCCTTGTAAT+GGG | 0.366655 | 4.1:-17149359 | None:intergenic |
| GGTGCTGATAATGGTTTATC+AGG | 0.373734 | 4.1:-17149393 | None:intergenic |
| GAAGATAAGTAACACTGTTA+TGG | 0.384215 | 4.1:+17149818 | MS.gene08365:CDS |
| TGATGCAAACAACTTGGTTC+TGG | 0.390697 | 4.1:-17147717 | None:intergenic |
| GAAGAAACATCCATTGTTAT+GGG | 0.391163 | 4.1:+17149900 | MS.gene08365:CDS |
| ACACACTTGAAACTTTCAAT+AGG | 0.397442 | 4.1:+17149552 | MS.gene08365:CDS |
| ATTGTTGTTGCTTGGAACTC+TGG | 0.397896 | 4.1:-17149264 | None:intergenic |
| AACAAGGTAGGTGCTGATAA+TGG | 0.405416 | 4.1:-17149402 | None:intergenic |
| CAGGTTGCATTGTTGTTGCT+TGG | 0.413228 | 4.1:-17149272 | None:intergenic |
| GAAACTGTTGCTTACAAGCT+TGG | 0.418931 | 4.1:-17149851 | None:intergenic |
| TCTGGTCTCTTTGAAACCCT+TGG | 0.440797 | 4.1:-17147602 | None:intergenic |
| AGAGACACAACTTCAGCATC+TGG | 0.455957 | 4.1:-17147528 | None:intergenic |
| AGAGTTGAAGTTCTAAGTTA+TGG | 0.456212 | 4.1:-17149470 | None:intergenic |
| AAAGTTGGCAATGGCAGAAA+AGG | 0.462255 | 4.1:+17149656 | MS.gene08365:CDS |
| AGCACTGGTAATCCTTGTAA+TGG | 0.468962 | 4.1:-17149360 | None:intergenic |
| ACAATGGATGTTTCTTCTGA+TGG | 0.469771 | 4.1:-17149894 | None:intergenic |
| TTCCCCTTCTGTGGTGGCTG+AGG | 0.471434 | 4.1:-17149931 | None:intergenic |
| ATGTTACCTGGTGTGCCTGC+CGG | 0.489494 | 4.1:-17147423 | None:intergenic |
| AGTATATCAGCCCCATTACA+AGG | 0.490202 | 4.1:+17149348 | MS.gene08365:CDS |
| TTCTGCTTCCCCTTCTGTGG+TGG | 0.491783 | 4.1:-17149937 | None:intergenic |
| TTGTTGCTTGGAACTCTGGT+TGG | 0.493027 | 4.1:-17149260 | None:intergenic |
| AGAAGACCGGCAGGCACACC+AGG | 0.497770 | 4.1:+17147417 | MS.gene08365:CDS |
| ACATAGTAATCATAAACAAT+GGG | 0.505280 | 4.1:+17147797 | MS.gene08365:CDS |
| GTTTGTGAGATCTGTAACCA+AGG | 0.507755 | 4.1:+17147585 | MS.gene08365:CDS |
| TACTAGTGAGGAGCTAAAGT+TGG | 0.509569 | 4.1:+17149641 | MS.gene08365:CDS |
| AAACAAGCACAAGATGAACT+TGG | 0.527243 | 4.1:+17149762 | MS.gene08365:CDS |
| ACTTGAGGGTTTATAGAGGA+AGG | 0.528633 | 4.1:-17149495 | None:intergenic |
| TCATTCTGCTTCCCCTTCTG+TGG | 0.531823 | 4.1:-17149940 | None:intergenic |
| AACATAGTAATCATAAACAA+TGG | 0.531879 | 4.1:+17147796 | MS.gene08365:CDS |
| ATTAACTGTGTTATCTAACA+TGG | 0.533403 | 4.1:-17147328 | None:intergenic |
| TTTGAAAGAGTTTACTAGTG+AGG | 0.537749 | 4.1:+17149629 | MS.gene08365:CDS |
| CATGATCCATGTCATGCACT+AGG | 0.544901 | 4.1:+17147738 | MS.gene08365:CDS |
| TTCTACTTGAGGGTTTATAG+AGG | 0.552798 | 4.1:-17149499 | None:intergenic |
| TTTGTGAGATCTGTAACCAA+GGG | 0.553552 | 4.1:+17147586 | MS.gene08365:CDS |
| GCTGATAATGGTTTATCAGG+TGG | 0.558635 | 4.1:-17149390 | None:intergenic |
| GTTGAAGTTCTAAGTTATGG+TGG | 0.560774 | 4.1:-17149467 | None:intergenic |
| ATGTCCTCAGCCACCACAGA+AGG | 0.565952 | 4.1:+17149927 | MS.gene08365:CDS |
| GGATCATGATGCAAACAACT+TGG | 0.569323 | 4.1:-17147723 | None:intergenic |
| AGAGGACATTCGTGTGATTG+TGG | 0.573870 | 4.1:+17147891 | MS.gene08365:CDS |
| CATGCACTAGGTGACCTTGT+TGG | 0.575089 | 4.1:+17147750 | MS.gene08365:CDS |
| GTTATGGTGGTGATGAGAAG+TGG | 0.575098 | 4.1:-17149454 | None:intergenic |
| ACAATCACACGAATGTCCTC+TGG | 0.575624 | 4.1:-17147889 | None:intergenic |
| TGATAATGCAAAAGCAGTAG+TGG | 0.577782 | 4.1:-17147364 | None:intergenic |
| TGTCCTCAGCCACCACAGAA+GGG | 0.586753 | 4.1:+17149928 | MS.gene08365:CDS |
| GTTTGTGACAAATGCAACAA+AGG | 0.587309 | 4.1:+17147819 | MS.gene08365:CDS |
| GAAGAAGACACAAAGTGCCA+TGG | 0.587753 | 4.1:+17147640 | MS.gene08365:CDS |
| TCTGAATTAGTTAACAAGGT+AGG | 0.590831 | 4.1:-17149414 | None:intergenic |
| AGCAGTAGTGGCATCAGAAG+AGG | 0.593577 | 4.1:-17147352 | None:intergenic |
| ATAATGAGTCAGAGAAACAA+AGG | 0.608502 | 4.1:+17149577 | MS.gene08365:CDS |
| CAAACTTGCTAGTTCCAATG+TGG | 0.610019 | 4.1:-17149610 | None:intergenic |
| AAGGAATGATGTATCCACAT+TGG | 0.613625 | 4.1:+17149596 | MS.gene08365:CDS |
| GTCCTCAGCCACCACAGAAG+GGG | 0.615788 | 4.1:+17149929 | MS.gene08365:CDS |
| TGAGGAGCTAAAGTTGGCAA+TGG | 0.615902 | 4.1:+17149647 | MS.gene08365:CDS |
| CAAGACGCATGCACAGTCAG+AGG | 0.626387 | 4.1:+17149231 | MS.gene08365:CDS |
| TTAACTGTGTTATCTAACAT+GGG | 0.627719 | 4.1:-17147327 | None:intergenic |
| ATCAAAACATGTGGTACCAG+AGG | 0.630022 | 4.1:+17147873 | MS.gene08365:CDS |
| TGTATCTGAATTAGTTAACA+AGG | 0.634479 | 4.1:-17149418 | None:intergenic |
| GCAGTTCTAGAAGAACATGC+AGG | 0.638781 | 4.1:-17149291 | None:intergenic |
| CACTGGTAATCCTTGTAATG+GGG | 0.639858 | 4.1:-17149358 | None:intergenic |
| TGGTGGTGATGAGAAGTGGA+AGG | 0.646826 | 4.1:-17149450 | None:intergenic |
| AAAGCACATATCAAAACATG+TGG | 0.657146 | 4.1:+17147864 | MS.gene08365:CDS |
| AAGCACAAGTCCATCTAGTG+AGG | 0.660327 | 4.1:+17149317 | MS.gene08365:CDS |
| AATGTTTCTTGATTCCAACA+AGG | 0.660532 | 4.1:-17147764 | None:intergenic |
| AGGTCACCTAGTGCATGACA+TGG | 0.667882 | 4.1:-17147744 | None:intergenic |
| GGACATGTAACCCATAACAA+TGG | 0.669538 | 4.1:-17149910 | None:intergenic |
| TTTGCATTATCAGAAAATGG+GGG | 0.689769 | 4.1:+17147375 | MS.gene08365:CDS |
| TTGAAAAGAGAAACAACACA+AGG | 0.699162 | 4.1:+17147669 | MS.gene08365:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTAGTTATTAATATATAT+AGG | + | chr4.1:17148809-17148828 | MS.gene08365:intron | 10.0% |
| !! | GTAAAATACTAATATTAATT+TGG | - | chr4.1:17148145-17148164 | None:intergenic | 10.0% |
| !!! | ATATTTAAATAGTACTATTT+TGG | + | chr4.1:17148336-17148355 | MS.gene08365:intron | 10.0% |
| !! | AAATTAATTAATCAAAGATC+TGG | - | chr4.1:17148694-17148713 | None:intergenic | 15.0% |
| !! | AATTAATTAATCAAAGATCT+GGG | - | chr4.1:17148693-17148712 | None:intergenic | 15.0% |
| !! | TAGCTAATATTATAAGTTTA+TGG | + | chr4.1:17148510-17148529 | MS.gene08365:intron | 15.0% |
| !! | TTTCATCTTAAAAAATAACA+TGG | - | chr4.1:17148741-17148760 | None:intergenic | 15.0% |
| !!! | ACTCTCAAATATAAAATTTT+AGG | - | chr4.1:17148235-17148254 | None:intergenic | 15.0% |
| !!! | CTCTCAAATATAAAATTTTA+GGG | - | chr4.1:17148234-17148253 | None:intergenic | 15.0% |
| !! | AACATAGTAATCATAAACAA+TGG | + | chr4.1:17147796-17147815 | MS.gene08365:CDS | 20.0% |
| !! | AATTAAATTCTCATCTTCTT+AGG | + | chr4.1:17148294-17148313 | MS.gene08365:intron | 20.0% |
| !! | ACATAGTAATCATAAACAAT+GGG | + | chr4.1:17147797-17147816 | MS.gene08365:CDS | 20.0% |
| !! | AGTCAATAACCATATATTAT+AGG | - | chr4.1:17149163-17149182 | None:intergenic | 20.0% |
| !! | ATGAGAATTTAATTGCAAAA+AGG | - | chr4.1:17148288-17148307 | None:intergenic | 20.0% |
| !! | TATTGATAAAAAATGCAGAT+AGG | - | chr4.1:17148548-17148567 | None:intergenic | 20.0% |
| !! | TGAGAATTTAATTGCAAAAA+GGG | - | chr4.1:17148287-17148306 | None:intergenic | 20.0% |
| !!! | ATTTTTTAACCTTGTTTTGT+GGG | + | chr4.1:17147494-17147513 | MS.gene08365:intron | 20.0% |
| !!! | GTCAAATTATATTTTCATAC+AGG | + | chr4.1:17148974-17148993 | MS.gene08365:intron | 20.0% |
| !!! | TATTTTTTAACCTTGTTTTG+TGG | + | chr4.1:17147493-17147512 | MS.gene08365:intron | 20.0% |
| !!! | TTTTATCAATAAACCAAACA+AGG | + | chr4.1:17148557-17148576 | MS.gene08365:intron | 20.0% |
| ! | ATAAGACAGAATGATCAAAT+AGG | - | chr4.1:17148636-17148655 | None:intergenic | 25.0% |
| ! | GAAACTATCTACAATAAAGA+TGG | - | chr4.1:17147994-17148013 | None:intergenic | 25.0% |
| ! | TAACAAAAGAAAAAGAAGAC+CGG | + | chr4.1:17147404-17147423 | MS.gene08365:CDS | 25.0% |
| ! | TAAGACAGAATGATCAAATA+GGG | - | chr4.1:17148635-17148654 | None:intergenic | 25.0% |
| ! | TAAGATGAAATAGCTATAAC+AGG | + | chr4.1:17148751-17148770 | MS.gene08365:intron | 25.0% |
| ! | TAATATATATAGGCCTTGAT+TGG | + | chr4.1:17148819-17148838 | MS.gene08365:intron | 25.0% |
| ! | TACAATAAAGATGGAAAACT+TGG | - | chr4.1:17147985-17148004 | None:intergenic | 25.0% |
| ! | TAGTAGCTAATTAATGATAC+TGG | - | chr4.1:17148488-17148507 | None:intergenic | 25.0% |
| ! | TGTATCTGAATTAGTTAACA+AGG | - | chr4.1:17149421-17149440 | None:intergenic | 25.0% |
| ! | TTGAGTTTGAAAATGCTAAA+AGG | + | chr4.1:17149733-17149752 | MS.gene08365:CDS | 25.0% |
| !! | CTTTTGCATTATCAGAAAAT+GGG | + | chr4.1:17147373-17147392 | MS.gene08365:CDS | 25.0% |
| !! | TTTTCTCTCTCTTTCTTTTT+CGG | + | chr4.1:17148022-17148041 | MS.gene08365:intron | 25.0% |
| !! | TTTTGCATTATCAGAAAATG+GGG | + | chr4.1:17147374-17147393 | MS.gene08365:CDS | 25.0% |
| !!! | AATTTGGTTTTTCTACTTGA+GGG | - | chr4.1:17149512-17149531 | None:intergenic | 25.0% |
| !!! | ATTCATTTTAGTACCTTGTT+TGG | - | chr4.1:17148573-17148592 | None:intergenic | 25.0% |
| !!! | TAGTTTTGATCGTTTGAATT+TGG | - | chr4.1:17149528-17149547 | None:intergenic | 25.0% |
| AAAGCACATATCAAAACATG+TGG | + | chr4.1:17147864-17147883 | MS.gene08365:CDS | 30.0% | |
| AATGTTTCTTGATTCCAACA+AGG | - | chr4.1:17147767-17147786 | None:intergenic | 30.0% | |
| ACAAACTGTTTATCCAATCA+AGG | - | chr4.1:17148835-17148854 | None:intergenic | 30.0% | |
| ACACACTTGAAACTTTCAAT+AGG | + | chr4.1:17149552-17149571 | MS.gene08365:CDS | 30.0% | |
| AGAAGAAACATCCATTGTTA+TGG | + | chr4.1:17149899-17149918 | MS.gene08365:CDS | 30.0% | |
| ATAATGAGTCAGAGAAACAA+AGG | + | chr4.1:17149577-17149596 | MS.gene08365:CDS | 30.0% | |
| CAATATGAGAAAGTGAAAGA+TGG | - | chr4.1:17147953-17147972 | None:intergenic | 30.0% | |
| CCAAACAGACCTATAATATA+TGG | + | chr4.1:17149151-17149170 | MS.gene08365:intron | 30.0% | |
| CCATATATTATAGGTCTGTT+TGG | - | chr4.1:17149154-17149173 | None:intergenic | 30.0% | |
| GAAGAAACATCCATTGTTAT+GGG | + | chr4.1:17149900-17149919 | MS.gene08365:CDS | 30.0% | |
| GAAGATAAGTAACACTGTTA+TGG | + | chr4.1:17149818-17149837 | MS.gene08365:CDS | 30.0% | |
| GTTCATCATTCATCAAATTC+AGG | + | chr4.1:17148081-17148100 | MS.gene08365:intron | 30.0% | |
| TCTGAATTAGTTAACAAGGT+AGG | - | chr4.1:17149417-17149436 | None:intergenic | 30.0% | |
| TCTGATTCTAACAAAGTCTT+TGG | - | chr4.1:17147558-17147577 | None:intergenic | 30.0% | |
| TTACATTTGCCCTTTGATTA+GGG | + | chr4.1:17149188-17149207 | MS.gene08365:intron | 30.0% | |
| TTCTATGCATTTGAAGATTC+TGG | - | chr4.1:17147623-17147642 | None:intergenic | 30.0% | |
| TTGAAAAGAGAAACAACACA+AGG | + | chr4.1:17147669-17147688 | MS.gene08365:CDS | 30.0% | |
| TTTGAAAGAGTTTACTAGTG+AGG | + | chr4.1:17149629-17149648 | MS.gene08365:CDS | 30.0% | |
| TTTGCATTATCAGAAAATGG+GGG | + | chr4.1:17147375-17147394 | MS.gene08365:CDS | 30.0% | |
| ! | AATTTTGCTGATATGTTACC+TGG | - | chr4.1:17147438-17147457 | None:intergenic | 30.0% |
| ! | CAATTGACTGTGTTTGTTAA+CGG | + | chr4.1:17148116-17148135 | MS.gene08365:intron | 30.0% |
| ! | GCTTTTGCATTATCAGAAAA+TGG | + | chr4.1:17147372-17147391 | MS.gene08365:CDS | 30.0% |
| ! | TCTCTTTTCAACAATTTCCA+TGG | - | chr4.1:17147660-17147679 | None:intergenic | 30.0% |
| ! | TTTTTACATGCTCTCTCAAA+CGG | + | chr4.1:17149084-17149103 | MS.gene08365:intron | 30.0% |
| !! | AGAGTTGAAGTTCTAAGTTA+TGG | - | chr4.1:17149473-17149492 | None:intergenic | 30.0% |
| !! | GAAGACTTAATTTGTACTAG+TGG | + | chr4.1:17148606-17148625 | MS.gene08365:intron | 30.0% |
| !!! | GAATTTGGTTTTTCTACTTG+AGG | - | chr4.1:17149513-17149532 | None:intergenic | 30.0% |
| AAACAAGCACAAGATGAACT+TGG | + | chr4.1:17149762-17149781 | MS.gene08365:CDS | 35.0% | |
| AAGGAATGATGTATCCACAT+TGG | + | chr4.1:17149596-17149615 | MS.gene08365:CDS | 35.0% | |
| ACAATGGATGTTTCTTCTGA+TGG | - | chr4.1:17149897-17149916 | None:intergenic | 35.0% | |
| CAGTTTCAATCTTCAACTTC+TGG | + | chr4.1:17149867-17149886 | MS.gene08365:CDS | 35.0% | |
| CTAAAATTTGCCTCACTAGA+TGG | - | chr4.1:17149330-17149349 | None:intergenic | 35.0% | |
| GTTACATTTGCCCTTTGATT+AGG | + | chr4.1:17149187-17149206 | MS.gene08365:intron | 35.0% | |
| GTTTGTGACAAATGCAACAA+AGG | + | chr4.1:17147819-17147838 | MS.gene08365:CDS | 35.0% | |
| TTCTACTTGAGGGTTTATAG+AGG | - | chr4.1:17149502-17149521 | None:intergenic | 35.0% | |
| TTTGTGAGATCTGTAACCAA+GGG | + | chr4.1:17147586-17147605 | MS.gene08365:CDS | 35.0% | |
| ! | AATGGTTTATCAGGTGGTTT+TGG | - | chr4.1:17149387-17149406 | None:intergenic | 35.0% |
| ! | TGATAATGCAAAAGCAGTAG+TGG | - | chr4.1:17147367-17147386 | None:intergenic | 35.0% |
| !! | GTTGAAGTTCTAAGTTATGG+TGG | - | chr4.1:17149470-17149489 | None:intergenic | 35.0% |
| !! | TTAATGATACTGGCTCTTAC+AGG | - | chr4.1:17148478-17148497 | None:intergenic | 35.0% |
| !!! | ATTTTAGGGTTTGACTTCCT+AGG | - | chr4.1:17148220-17148239 | None:intergenic | 35.0% |
| AAAAGAAAAAGAAGACCGGC+AGG | + | chr4.1:17147408-17147427 | MS.gene08365:CDS | 40.0% | |
| AAACTCTCCACCCTAATCAA+AGG | - | chr4.1:17149201-17149220 | None:intergenic | 40.0% | |
| AAAGCCTGCATAATGATGAG+GGG | - | chr4.1:17148447-17148466 | None:intergenic | 40.0% | |
| AAAGTTGGCAATGGCAGAAA+AGG | + | chr4.1:17149656-17149675 | MS.gene08365:CDS | 40.0% | |
| AACTCTCCACCCTAATCAAA+GGG | - | chr4.1:17149200-17149219 | None:intergenic | 40.0% | |
| AAGAAAGCAGAACACAAACC+TGG | - | chr4.1:17147928-17147947 | None:intergenic | 40.0% | |
| ACAGTTCTTAGGACTGTAGT+AGG | + | chr4.1:17149111-17149130 | MS.gene08365:intron | 40.0% | |
| ACTTGAGGGTTTATAGAGGA+AGG | - | chr4.1:17149498-17149517 | None:intergenic | 40.0% | |
| AGTATATCAGCCCCATTACA+AGG | + | chr4.1:17149348-17149367 | MS.gene08365:CDS | 40.0% | |
| ATCAAAACATGTGGTACCAG+AGG | + | chr4.1:17147873-17147892 | MS.gene08365:CDS | 40.0% | |
| CAAACGGTTCAACAGTTCTT+AGG | + | chr4.1:17149100-17149119 | MS.gene08365:intron | 40.0% | |
| CAAAGCCTGCATAATGATGA+GGG | - | chr4.1:17148448-17148467 | None:intergenic | 40.0% | |
| CACTGGTAATCCTTGTAATG+GGG | - | chr4.1:17149361-17149380 | None:intergenic | 40.0% | |
| CTAAACACACCCACAAAACA+AGG | - | chr4.1:17147506-17147525 | None:intergenic | 40.0% | |
| GGACATGTAACCCATAACAA+TGG | - | chr4.1:17149913-17149932 | None:intergenic | 40.0% | |
| GGATCATGATGCAAACAACT+TGG | - | chr4.1:17147726-17147745 | None:intergenic | 40.0% | |
| GTTTGTGAGATCTGTAACCA+AGG | + | chr4.1:17147585-17147604 | MS.gene08365:CDS | 40.0% | |
| TACTAGTGAGGAGCTAAAGT+TGG | + | chr4.1:17149641-17149660 | MS.gene08365:CDS | 40.0% | |
| TGATGCAAACAACTTGGTTC+TGG | - | chr4.1:17147720-17147739 | None:intergenic | 40.0% | |
| ! | ATTGTTGTTGCTTGGAACTC+TGG | - | chr4.1:17149267-17149286 | None:intergenic | 40.0% |
| ! | GAAACTGTTGCTTACAAGCT+TGG | - | chr4.1:17149854-17149873 | None:intergenic | 40.0% |
| ! | GCACTGGTAATCCTTGTAAT+GGG | - | chr4.1:17149362-17149381 | None:intergenic | 40.0% |
| !! | AACAAGGTAGGTGCTGATAA+TGG | - | chr4.1:17149405-17149424 | None:intergenic | 40.0% |
| !! | AGCACTGGTAATCCTTGTAA+TGG | - | chr4.1:17149363-17149382 | None:intergenic | 40.0% |
| !! | CAAACTTGCTAGTTCCAATG+TGG | - | chr4.1:17149613-17149632 | None:intergenic | 40.0% |
| !! | GCTGATAATGGTTTATCAGG+TGG | - | chr4.1:17149393-17149412 | None:intergenic | 40.0% |
| !! | GGTGCTGATAATGGTTTATC+AGG | - | chr4.1:17149396-17149415 | None:intergenic | 40.0% |
| AAGCACAAGTCCATCTAGTG+AGG | + | chr4.1:17149317-17149336 | MS.gene08365:CDS | 45.0% | |
| AAGCCTGCATAATGATGAGG+GGG | - | chr4.1:17148446-17148465 | None:intergenic | 45.0% | |
| ACAATCACACGAATGTCCTC+TGG | - | chr4.1:17147892-17147911 | None:intergenic | 45.0% | |
| AGAGACACAACTTCAGCATC+TGG | - | chr4.1:17147531-17147550 | None:intergenic | 45.0% | |
| AGAGGACATTCGTGTGATTG+TGG | + | chr4.1:17147891-17147910 | MS.gene08365:CDS | 45.0% | |
| AGATCTGGGTCATGACTCAT+AGG | - | chr4.1:17148679-17148698 | None:intergenic | 45.0% | |
| CATGATCCATGTCATGCACT+AGG | + | chr4.1:17147738-17147757 | MS.gene08365:CDS | 45.0% | |
| CATTTGCCCTTTGATTAGGG+TGG | + | chr4.1:17149191-17149210 | MS.gene08365:intron | 45.0% | |
| GCAAAGCCTGCATAATGATG+AGG | - | chr4.1:17148449-17148468 | None:intergenic | 45.0% | |
| TGAGGAGCTAAAGTTGGCAA+TGG | + | chr4.1:17149647-17149666 | MS.gene08365:CDS | 45.0% | |
| ! | ATTGTGGTCGTGTGTTTTCC+AGG | + | chr4.1:17147907-17147926 | MS.gene08365:CDS | 45.0% |
| ! | CAGGTTGCATTGTTGTTGCT+TGG | - | chr4.1:17149275-17149294 | None:intergenic | 45.0% |
| ! | GAAGAAGACACAAAGTGCCA+TGG | + | chr4.1:17147640-17147659 | MS.gene08365:CDS | 45.0% |
| ! | GTTATGGTGGTGATGAGAAG+TGG | - | chr4.1:17149457-17149476 | None:intergenic | 45.0% |
| ! | TAGGGTTTGACTTCCTAGGA+AGG | - | chr4.1:17148216-17148235 | None:intergenic | 45.0% |
| ! | TTGTTGCTTGGAACTCTGGT+TGG | - | chr4.1:17149263-17149282 | None:intergenic | 45.0% |
| !! | GCAGTTCTAGAAGAACATGC+AGG | - | chr4.1:17149294-17149313 | None:intergenic | 45.0% |
| !! | TCTGGTCTCTTTGAAACCCT+TGG | - | chr4.1:17147605-17147624 | None:intergenic | 45.0% |
| AGCAGTAGTGGCATCAGAAG+AGG | - | chr4.1:17147355-17147374 | None:intergenic | 50.0% | |
| AGGTCACCTAGTGCATGACA+TGG | - | chr4.1:17147747-17147766 | None:intergenic | 50.0% | |
| ATAATGATGAGGGGGTGGGT+GGG | - | chr4.1:17148438-17148457 | None:intergenic | 50.0% | |
| CATGCACTAGGTGACCTTGT+TGG | + | chr4.1:17147750-17147769 | MS.gene08365:CDS | 50.0% | |
| CTGCATAATGATGAGGGGGT+GGG | - | chr4.1:17148442-17148461 | None:intergenic | 50.0% | |
| TCATTCTGCTTCCCCTTCTG+TGG | - | chr4.1:17149943-17149962 | None:intergenic | 50.0% | |
| TCTTCTGCAGCTACCTTCCT+AGG | + | chr4.1:17148200-17148219 | MS.gene08365:intron | 50.0% | |
| TGTGTGTGAGTGAGTGTGTG+TGG | + | chr4.1:17148059-17148078 | MS.gene08365:intron | 50.0% | |
| ! | TGGTGGTGATGAGAAGTGGA+AGG | - | chr4.1:17149453-17149472 | None:intergenic | 50.0% |
| !!! | TCAGGTGGTTTTGGAAGCAC+TGG | - | chr4.1:17149378-17149397 | None:intergenic | 50.0% |
| ATGTCCTCAGCCACCACAGA+AGG | + | chr4.1:17149927-17149946 | MS.gene08365:CDS | 55.0% | |
| ATGTTACCTGGTGTGCCTGC+CGG | - | chr4.1:17147426-17147445 | None:intergenic | 55.0% | |
| CAAGACGCATGCACAGTCAG+AGG | + | chr4.1:17149231-17149250 | MS.gene08365:CDS | 55.0% | |
| CATAATGATGAGGGGGTGGG+TGG | - | chr4.1:17148439-17148458 | None:intergenic | 55.0% | |
| CCACCCCCTCATCATTATGC+AGG | + | chr4.1:17148440-17148459 | MS.gene08365:intron | 55.0% | |
| CCTGCATAATGATGAGGGGG+TGG | - | chr4.1:17148443-17148462 | None:intergenic | 55.0% | |
| TGTCCTCAGCCACCACAGAA+GGG | + | chr4.1:17149928-17149947 | MS.gene08365:CDS | 55.0% | |
| TTCTGCTTCCCCTTCTGTGG+TGG | - | chr4.1:17149940-17149959 | None:intergenic | 55.0% | |
| GTCCTCAGCCACCACAGAAG+GGG | + | chr4.1:17149929-17149948 | MS.gene08365:CDS | 60.0% | |
| TTCCCCTTCTGTGGTGGCTG+AGG | - | chr4.1:17149934-17149953 | None:intergenic | 60.0% | |
| AGAAGACCGGCAGGCACACC+AGG | + | chr4.1:17147417-17147436 | MS.gene08365:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 17147330 | 17149962 | 17147330 | ID=MS.gene08365 |
| chr4.1 | mRNA | 17147330 | 17149962 | 17147330 | ID=MS.gene08365.t1;Parent=MS.gene08365 |
| chr4.1 | exon | 17147330 | 17147438 | 17147330 | ID=MS.gene08365.t1.exon1;Parent=MS.gene08365.t1 |
| chr4.1 | CDS | 17147330 | 17147438 | 17147330 | ID=cds.MS.gene08365.t1;Parent=MS.gene08365.t1 |
| chr4.1 | exon | 17147526 | 17147928 | 17147526 | ID=MS.gene08365.t1.exon2;Parent=MS.gene08365.t1 |
| chr4.1 | CDS | 17147526 | 17147928 | 17147526 | ID=cds.MS.gene08365.t1;Parent=MS.gene08365.t1 |
| chr4.1 | exon | 17149209 | 17149962 | 17149209 | ID=MS.gene08365.t1.exon3;Parent=MS.gene08365.t1 |
| chr4.1 | CDS | 17149209 | 17149962 | 17149209 | ID=cds.MS.gene08365.t1;Parent=MS.gene08365.t1 |
| Gene Sequence |
| Protein sequence |
