Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23338.t1 | XP_013456434.1 | 92.4 | 516 | 37 | 1 | 1 | 514 | 1 | 516 | 5.60E-251 | 876.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23338.t1 | Q8W4G3 | 71.1 | 418 | 120 | 1 | 97 | 513 | 110 | 527 | 3.2e-170 | 599.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23338.t1 | A0A072UX77 | 92.4 | 516 | 37 | 1 | 1 | 514 | 1 | 516 | 4.1e-251 | 876.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene23338 | 0.807021 | 6.20E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene23338 | 0.82451 | 7.76E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene23338 | 0.8158 | 7.68E-52 | -1.69E-46 |
| MS.gene049828 | MS.gene23338 | 0.80205 | 6.74E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene23338 | 0.849499 | 3.11E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene23338 | 0.811185 | 7.94E-51 | -1.69E-46 |
| MS.gene050520 | MS.gene23338 | 0.83643 | 9.40E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene23338 | 0.823553 | 1.30E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene23338 | 0.852732 | 3.81E-61 | -1.69E-46 |
| MS.gene051360 | MS.gene23338 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene23338 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene23338 | 0.820251 | 7.57E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene23338 | 0.80079 | 1.22E-48 | -1.69E-46 |
| MS.gene052322 | MS.gene23338 | 0.801157 | 1.03E-48 | -1.69E-46 |
| MS.gene052484 | MS.gene23338 | 0.820808 | 5.64E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene23338 | 0.804522 | 2.07E-49 | -1.69E-46 |
| MS.gene052508 | MS.gene23338 | 0.830628 | 2.64E-55 | -1.69E-46 |
| MS.gene052510 | MS.gene23338 | 0.823776 | 1.15E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene23338 | 0.818956 | 1.50E-52 | -1.69E-46 |
| MS.gene053207 | MS.gene23338 | 0.863736 | 2.01E-64 | -1.69E-46 |
| MS.gene053209 | MS.gene23338 | 0.815248 | 1.02E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene23338 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene23338 | 0.811293 | 7.53E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene23338 | 0.803262 | 3.79E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene23338 | 0.844389 | 7.79E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene23338 | 0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene23338 | 0.826195 | 3.10E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene23338 | 0.823603 | 1.27E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene23338 | 0.806565 | 7.73E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene23338 | 0.807428 | 5.08E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene23338 | 0.8134 | 2.61E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene23338 | 0.810019 | 1.42E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene23338 | 0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene056611 | MS.gene23338 | 0.814725 | 1.33E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene23338 | 0.803007 | 4.28E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene23338 | 0.842585 | 2.36E-58 | -1.69E-46 |
| MS.gene057416 | MS.gene23338 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene23338 | 0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene05806 | MS.gene23338 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene058323 | MS.gene23338 | 0.803637 | 3.17E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene23338 | 0.805326 | 1.41E-49 | -1.69E-46 |
| MS.gene058948 | MS.gene23338 | 0.824594 | 7.42E-54 | -1.69E-46 |
| MS.gene059674 | MS.gene23338 | 0.803212 | 3.88E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene23338 | 0.824251 | 8.93E-54 | -1.69E-46 |
| MS.gene059711 | MS.gene23338 | 0.819483 | 1.13E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene23338 | 0.806871 | 6.67E-50 | -1.69E-46 |
| MS.gene060193 | MS.gene23338 | 0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene23338 | 0.818979 | 1.48E-52 | -1.69E-46 |
| MS.gene060569 | MS.gene23338 | 0.832967 | 6.99E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene23338 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene23338 | 0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene060837 | MS.gene23338 | 0.845627 | 3.61E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene23338 | 0.802452 | 5.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23338.t1 | MTR_4g071445 | 95.349 | 516 | 22 | 1 | 1 | 514 | 1 | 516 | 0.0 | 961 |
| MS.gene23338.t1 | MTR_4g071465 | 92.607 | 514 | 35 | 1 | 1 | 514 | 1 | 511 | 0.0 | 930 |
| MS.gene23338.t1 | MTR_4g071420 | 79.693 | 522 | 93 | 4 | 1 | 513 | 1 | 518 | 0.0 | 808 |
| MS.gene23338.t1 | MTR_4g071370 | 68.762 | 509 | 148 | 3 | 13 | 513 | 12 | 517 | 0.0 | 685 |
| MS.gene23338.t1 | MTR_4g071390 | 66.859 | 519 | 150 | 5 | 1 | 513 | 1 | 503 | 0.0 | 682 |
| MS.gene23338.t1 | MTR_4g071420 | 78.484 | 409 | 75 | 4 | 1 | 400 | 1 | 405 | 0.0 | 618 |
| MS.gene23338.t1 | MTR_4g071370 | 67.527 | 465 | 140 | 3 | 13 | 469 | 12 | 473 | 0.0 | 613 |
| MS.gene23338.t1 | MTR_4g071370 | 67.727 | 440 | 131 | 3 | 13 | 444 | 12 | 448 | 0.0 | 578 |
| MS.gene23338.t1 | MTR_5g099020 | 24.341 | 493 | 308 | 16 | 71 | 528 | 83 | 545 | 1.32e-18 | 89.7 |
| MS.gene23338.t1 | MTR_5g099020 | 24.341 | 493 | 308 | 16 | 71 | 528 | 83 | 545 | 1.47e-18 | 89.4 |
| MS.gene23338.t1 | MTR_2g097900 | 24.304 | 395 | 244 | 9 | 104 | 451 | 36 | 422 | 5.62e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23338.t1 | AT2G21340 | 64.693 | 473 | 151 | 3 | 57 | 513 | 55 | 527 | 0.0 | 631 |
| MS.gene23338.t1 | AT2G21340 | 64.271 | 473 | 150 | 4 | 57 | 513 | 55 | 524 | 0.0 | 622 |
| MS.gene23338.t1 | AT4G39030 | 65.023 | 426 | 140 | 2 | 93 | 513 | 89 | 510 | 0.0 | 570 |
| MS.gene23338.t1 | AT2G38330 | 25.814 | 430 | 284 | 11 | 121 | 527 | 95 | 512 | 5.43e-20 | 94.0 |
| MS.gene23338.t1 | AT4G38380 | 23.495 | 515 | 338 | 16 | 27 | 511 | 32 | 520 | 1.76e-17 | 86.3 |
| MS.gene23338.t1 | AT4G38380 | 23.238 | 525 | 337 | 17 | 27 | 511 | 32 | 530 | 6.94e-17 | 84.3 |
| MS.gene23338.t1 | AT4G38380 | 23.238 | 525 | 337 | 17 | 27 | 511 | 32 | 530 | 6.94e-17 | 84.3 |
| MS.gene23338.t1 | AT3G08040 | 24.259 | 371 | 250 | 11 | 173 | 529 | 58 | 411 | 8.22e-13 | 70.9 |
| MS.gene23338.t1 | AT3G08040 | 24.259 | 371 | 250 | 11 | 173 | 529 | 162 | 515 | 9.47e-13 | 71.2 |
| MS.gene23338.t1 | AT1G51340 | 24.138 | 319 | 229 | 7 | 206 | 519 | 189 | 499 | 9.96e-12 | 67.8 |
| MS.gene23338.t1 | AT1G51340 | 24.138 | 319 | 229 | 7 | 206 | 519 | 189 | 499 | 9.96e-12 | 67.8 |
| MS.gene23338.t1 | AT1G51340 | 24.138 | 319 | 229 | 7 | 206 | 519 | 189 | 499 | 9.96e-12 | 67.8 |
| MS.gene23338.t1 | AT1G51340 | 24.451 | 319 | 228 | 7 | 206 | 519 | 183 | 493 | 1.23e-11 | 67.8 |
| MS.gene23338.t1 | AT4G38380 | 22.678 | 463 | 299 | 13 | 86 | 511 | 18 | 458 | 1.62e-11 | 67.0 |
Find 126 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGGCCTTGTTTACTTAT+TGG | 0.177183 | 4.4:+37270759 | MS.gene23338:CDS |
| AGCTGTATTCGGGTTGCTTT+TGG | 0.197977 | 4.4:+37272693 | MS.gene23338:CDS |
| AAGGAAATTATTCTGTTTAC+TGG | 0.206301 | 4.4:+37269164 | MS.gene23338:CDS |
| TTTGAATGGTCTAGTATTAT+TGG | 0.209178 | 4.4:+37274030 | MS.gene23338:CDS |
| CCCTCCAGGCCGACTGTTGC+AGG | 0.218536 | 4.4:-37272932 | None:intergenic |
| CTGGACCTGCTATTGGTCTT+TGG | 0.222999 | 4.4:+37269183 | MS.gene23338:CDS |
| CTAACTATTGGAGCTGTATT+CGG | 0.232506 | 4.4:+37272682 | MS.gene23338:CDS |
| GCCACTGGGGTATAGTTATT+TGG | 0.233210 | 4.4:+37274593 | MS.gene23338:CDS |
| ATCGATTGCTACTTCGAATA+TGG | 0.233585 | 4.4:+37269411 | MS.gene23338:CDS |
| CTGTTTACTGGACCTGCTAT+TGG | 0.241419 | 4.4:+37269176 | MS.gene23338:CDS |
| GCTGCTGCCAGTATTATAAA+TGG | 0.247426 | 4.4:+37271346 | MS.gene23338:CDS |
| ATTTGTGACATTGATGTTAA+AGG | 0.250101 | 4.4:+37272014 | MS.gene23338:CDS |
| CTAAGGTCTCTTCTAACTAT+TGG | 0.258425 | 4.4:+37272670 | MS.gene23338:CDS |
| CTGTGCAGATATTTAAACTA+TGG | 0.264751 | 4.4:+37271385 | MS.gene23338:CDS |
| TCGGAAACTGTGCGGGGAAA+TGG | 0.271411 | 4.4:+37274512 | MS.gene23338:CDS |
| ACCAATTCCATTTATAATAC+TGG | 0.285900 | 4.4:-37271353 | None:intergenic |
| TGCTACTGCCCTTGCTAAAC+AGG | 0.288099 | 4.4:+37269435 | MS.gene23338:CDS |
| TCAATTGAACTCGCTGCTTT+AGG | 0.289940 | 4.4:+37269260 | MS.gene23338:CDS |
| GCATAAATGATTGGGCAGTT+TGG | 0.309238 | 4.4:-37272350 | None:intergenic |
| TAGAAGAAACCTCGCTGATT+TGG | 0.310022 | 4.4:-37269085 | None:intergenic |
| TTGGGGACCCTTGAAGGCTT+TGG | 0.310354 | 4.4:+37271324 | MS.gene23338:CDS |
| CGGAAACTGTGCGGGGAAAT+GGG | 0.313766 | 4.4:+37274513 | MS.gene23338:CDS |
| CATAAATGATTGGGCAGTTT+GGG | 0.318301 | 4.4:-37272349 | None:intergenic |
| TCCTCCCACCTTCCCTTCTA+AGG | 0.321409 | 4.4:+37268934 | MS.gene23338:CDS |
| TAGTAGTGTTCTTCCTTAGA+AGG | 0.322137 | 4.4:-37268947 | None:intergenic |
| ATGGGATCGCTGGGGCTGCA+TGG | 0.325681 | 4.4:+37271404 | MS.gene23338:CDS |
| CTCATTGATACTGCTGTTGT+TGG | 0.336581 | 4.4:+37269227 | MS.gene23338:CDS |
| AACTGGTTGAGCAGAGTATA+TGG | 0.336997 | 4.4:+37269132 | MS.gene23338:CDS |
| GTCTTGGTATGAAAGATTCT+TGG | 0.344370 | 4.4:+37271305 | MS.gene23338:intron |
| TAACTATTGGAGCTGTATTC+GGG | 0.354893 | 4.4:+37272683 | MS.gene23338:CDS |
| GTGATCAAGTGTGGTGCCAC+TGG | 0.372752 | 4.4:+37274578 | MS.gene23338:CDS |
| CAGATCCTATCCAGCAGATA+TGG | 0.375163 | 4.4:+37274134 | MS.gene23338:intron |
| GACAGGCTCGGTCGCTTCTA+AGG | 0.385164 | 4.4:+37272653 | MS.gene23338:intron |
| CGGCCTGGAGGGAACATTGC+TGG | 0.395766 | 4.4:+37272943 | MS.gene23338:CDS |
| TCTTGGTATGAAAGATTCTT+GGG | 0.396058 | 4.4:+37271306 | MS.gene23338:CDS |
| TTTCACTTGCTGGATTTCAA+TGG | 0.400259 | 4.4:+37274174 | MS.gene23338:CDS |
| TGGGATCGCTGGGGCTGCAT+GGG | 0.408841 | 4.4:+37271405 | MS.gene23338:CDS |
| TAATGCATTGGTTTGGTGAA+TGG | 0.412748 | 4.4:-37268971 | None:intergenic |
| GGCAGCAGCCAAAGCCTTCA+AGG | 0.419588 | 4.4:-37271332 | None:intergenic |
| TCAACTCAGGCATAAATGAT+TGG | 0.421244 | 4.4:-37272359 | None:intergenic |
| AACATCAATGTCACAAATAC+AGG | 0.423376 | 4.4:-37272009 | None:intergenic |
| TTTATAAGTTTGTCAATGAC+TGG | 0.429492 | 4.4:+37273998 | MS.gene23338:CDS |
| AGAAGAAGAAGTGAAGGAAC+TGG | 0.429921 | 4.4:+37269115 | MS.gene23338:CDS |
| TTCACTTGCTGGATTTCAAT+GGG | 0.432604 | 4.4:+37274175 | MS.gene23338:CDS |
| GTATGGAGTAAATCGGAGTT+TGG | 0.433384 | 4.4:+37272383 | MS.gene23338:CDS |
| GAAACTCGAAGCGACTGTTC+CGG | 0.441889 | 4.4:-37269007 | None:intergenic |
| GCCAGTATTATAAATGGAAT+TGG | 0.442168 | 4.4:+37271352 | MS.gene23338:CDS |
| AAGATATACGTTCAAGGCGG+TGG | 0.445944 | 4.4:-37274554 | None:intergenic |
| AGATTCTTGGGGACCCTTGA+AGG | 0.447575 | 4.4:+37271318 | MS.gene23338:CDS |
| ACCTGATCAGATGGTCATCC+AGG | 0.449016 | 4.4:+37272762 | MS.gene23338:CDS |
| GATATAATAATGCATTGGTT+TGG | 0.459532 | 4.4:-37268978 | None:intergenic |
| CACACCTGCAACAGTCGGCC+TGG | 0.466186 | 4.4:+37272928 | MS.gene23338:CDS |
| TATTTAAACTATGGGATCGC+TGG | 0.466318 | 4.4:+37271394 | MS.gene23338:CDS |
| CGCAGCTAATACTTATGTCC+AGG | 0.472482 | 4.4:+37270433 | MS.gene23338:CDS |
| TCCTGGATGACCATCTGATC+AGG | 0.473180 | 4.4:-37272763 | None:intergenic |
| TTTATGCCTGAGTTGATGTA+TGG | 0.474513 | 4.4:+37272366 | MS.gene23338:CDS |
| GCCTTGCAAACCATATCTGC+TGG | 0.476879 | 4.4:-37274144 | None:intergenic |
| TTTGCTCATGCAGGCTGGGC+GGG | 0.477622 | 4.4:+37273967 | MS.gene23338:intron |
| TGTGCAGATATTTAAACTAT+GGG | 0.482960 | 4.4:+37271386 | MS.gene23338:CDS |
| AGTTGTATCGGAAACTGTGC+GGG | 0.487415 | 4.4:+37274505 | MS.gene23338:CDS |
| TGGGGCTGCATGGGCTACAT+TGG | 0.491626 | 4.4:+37271414 | MS.gene23338:CDS |
| AGTTGATGTATGGAGTAAAT+CGG | 0.492680 | 4.4:+37272376 | MS.gene23338:CDS |
| TTGTTGTAACATCTGTTACT+TGG | 0.499431 | 4.4:+37272719 | MS.gene23338:CDS |
| CAACTCAGGCATAAATGATT+GGG | 0.499704 | 4.4:-37272358 | None:intergenic |
| CTGCAGGTGCTGAGTTGTAT+CGG | 0.500020 | 4.4:+37274493 | MS.gene23338:intron |
| TGATCAAGTGTGGTGCCACT+GGG | 0.500320 | 4.4:+37274579 | MS.gene23338:CDS |
| TTGGTGTTAGATTCGAGGGT+TGG | 0.502304 | 4.4:+37270737 | MS.gene23338:intron |
| TTTCCTTCACCATTCCTTCA+GGG | 0.508678 | 4.4:+37271953 | MS.gene23338:CDS |
| GGAAACTGTGCGGGGAAATG+GGG | 0.518399 | 4.4:+37274514 | MS.gene23338:CDS |
| CTTCACCATTCCTTCAGGGA+AGG | 0.518414 | 4.4:+37271957 | MS.gene23338:CDS |
| ATTTAAACTATGGGATCGCT+GGG | 0.521866 | 4.4:+37271395 | MS.gene23338:CDS |
| GCAAACCATATCTGCTGGAT+AGG | 0.523619 | 4.4:-37274139 | None:intergenic |
| TTGTGATTATGCAGATGCAT+AGG | 0.528902 | 4.4:+37272873 | MS.gene23338:intron |
| CCTGCAACAGTCGGCCTGGA+GGG | 0.530670 | 4.4:+37272932 | MS.gene23338:CDS |
| GAGTATATGGATTCAGATGA+AGG | 0.533192 | 4.4:+37269145 | MS.gene23338:CDS |
| ATCACAAAGATATACGTTCA+AGG | 0.539081 | 4.4:-37274560 | None:intergenic |
| GATTGGGCAGTTTGGGAGAG+AGG | 0.541089 | 4.4:-37272342 | None:intergenic |
| GAGCAAAGCTCTAAATGAGA+AGG | 0.541585 | 4.4:+37271918 | MS.gene23338:CDS |
| TTAGGCGCAACAACGCTAGC+AGG | 0.548010 | 4.4:+37270251 | MS.gene23338:CDS |
| TATGTTTGTGTAGGATAGGG+AGG | 0.548718 | 4.4:+37270151 | MS.gene23338:intron |
| TCGAGGATATAATAATGCAT+TGG | 0.555719 | 4.4:-37268983 | None:intergenic |
| AAATTCCTTCCCTGAAGGAA+TGG | 0.556149 | 4.4:-37271962 | None:intergenic |
| GTTAGATTCGAGGGTTGGCA+TGG | 0.557043 | 4.4:+37270742 | MS.gene23338:intron |
| TCCAGCAGATATGGTTTGCA+AGG | 0.560688 | 4.4:+37274143 | MS.gene23338:CDS |
| GACAGAAATTCCTTCCCTGA+AGG | 0.564886 | 4.4:-37271967 | None:intergenic |
| AGTAGTGTTCTTCCTTAGAA+GGG | 0.565504 | 4.4:-37268946 | None:intergenic |
| GTGTTCTTCCTTAGAAGGGA+AGG | 0.565700 | 4.4:-37268942 | None:intergenic |
| AAGAACAAACCTGTTTAGCA+AGG | 0.565978 | 4.4:-37269444 | None:intergenic |
| ATACCAGCAATGTTCCCTCC+AGG | 0.568305 | 4.4:-37272946 | None:intergenic |
| GCTATTGGTCTTTGGTTATG+CGG | 0.571938 | 4.4:+37269191 | MS.gene23338:CDS |
| GAAACTGTGCGGGGAAATGG+GGG | 0.573752 | 4.4:+37274515 | MS.gene23338:CDS |
| GCAGCAGCCAAAGCCTTCAA+GGG | 0.575285 | 4.4:-37271331 | None:intergenic |
| GATATGGTTTGCAAGGCTGT+TGG | 0.577198 | 4.4:+37274150 | MS.gene23338:CDS |
| TCCTTAGAAGGGAAGGTGGG+AGG | 0.582462 | 4.4:-37268935 | None:intergenic |
| GCATTATTATATCCTCGAGC+CGG | 0.588156 | 4.4:+37268988 | MS.gene23338:CDS |
| AGCAAAGCTCTAAATGAGAA+GGG | 0.592366 | 4.4:+37271919 | MS.gene23338:CDS |
| TTCTTCCTTAGAAGGGAAGG+TGG | 0.595058 | 4.4:-37268939 | None:intergenic |
| CTTCCCTGAAGGAATGGTGA+AGG | 0.598270 | 4.4:-37271956 | None:intergenic |
| ACCTGCAACAGTCGGCCTGG+AGG | 0.603468 | 4.4:+37272931 | MS.gene23338:CDS |
| ATTTGCTCATGCAGGCTGGG+CGG | 0.603806 | 4.4:+37273966 | MS.gene23338:intron |
| AGATATACGTTCAAGGCGGT+GGG | 0.605187 | 4.4:-37274553 | None:intergenic |
| GATCGATTGCTCAAAGTGCA+AGG | 0.606336 | 4.4:+37270781 | MS.gene23338:CDS |
| GATACTGCTGTTGTTGGTCA+AGG | 0.613645 | 4.4:+37269233 | MS.gene23338:CDS |
| CATAACCAAAGACCAATAGC+AGG | 0.617530 | 4.4:-37269188 | None:intergenic |
| AGAACAAACCTGTTTAGCAA+GGG | 0.621535 | 4.4:-37269443 | None:intergenic |
| TGGACATAAGTATTAGCTGC+GGG | 0.623250 | 4.4:-37270431 | None:intergenic |
| AGTAAATCGGAGTTTGGCAA+AGG | 0.624488 | 4.4:+37272389 | MS.gene23338:CDS |
| GAAGCGACTGTTCCGGCTCG+AGG | 0.626649 | 4.4:-37269000 | None:intergenic |
| TACATGTTATGCGCAATATG+TGG | 0.626684 | 4.4:+37272315 | MS.gene23338:CDS |
| TTTACTCCATACATCAACTC+AGG | 0.632825 | 4.4:-37272372 | None:intergenic |
| TCTTCCTTAGAAGGGAAGGT+GGG | 0.639612 | 4.4:-37268938 | None:intergenic |
| ATCGATCCAATAAGTAAACA+AGG | 0.654105 | 4.4:-37270765 | None:intergenic |
| TATATCTTTGTGATCAAGTG+TGG | 0.669008 | 4.4:+37274569 | MS.gene23338:CDS |
| CTTGGTATGAAAGATTCTTG+GGG | 0.676112 | 4.4:+37271307 | MS.gene23338:CDS |
| CTGGTCACACCTGCAACAGT+CGG | 0.690613 | 4.4:+37272923 | MS.gene23338:CDS |
| CTGGACATAAGTATTAGCTG+CGG | 0.697551 | 4.4:-37270432 | None:intergenic |
| GAGTTGTATCGGAAACTGTG+CGG | 0.703127 | 4.4:+37274504 | MS.gene23338:CDS |
| GGAGGAAACGAAGAGGTACG+TGG | 0.706220 | 4.4:-37268917 | None:intergenic |
| GAAGGTGGGAGGAAACGAAG+AGG | 0.710311 | 4.4:-37268924 | None:intergenic |
| TGATCAGATGGTCATCCAGG+AGG | 0.712365 | 4.4:+37272765 | MS.gene23338:CDS |
| ACCAAATAACTATACCCCAG+TGG | 0.730731 | 4.4:-37274594 | None:intergenic |
| GTATCAATGAGACTCATCAA+CGG | 0.734956 | 4.4:-37269215 | None:intergenic |
| GTTGTATCGGAAACTGTGCG+GGG | 0.735175 | 4.4:+37274506 | MS.gene23338:CDS |
| GATCAAGTGTGGTGCCACTG+GGG | 0.737199 | 4.4:+37274580 | MS.gene23338:CDS |
| TTTAAACTATGGGATCGCTG+GGG | 0.771769 | 4.4:+37271396 | MS.gene23338:CDS |
| ACAAAGATATACGTTCAAGG+CGG | 0.792492 | 4.4:-37274557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCTTAATTTAAATTGA+AGG | - | chr4.4:37270484-37270503 | None:intergenic | 10.0% |
| !! | AGAAATCATAAAATAGTTTA+TGG | + | chr4.4:37270526-37270545 | MS.gene23338:intron | 15.0% |
| !! | ATATACATAAAACTACAATA+TGG | - | chr4.4:37272604-37272623 | None:intergenic | 15.0% |
| !! | TTAATTATTGGTATCATATA+TGG | + | chr4.4:37271825-37271844 | MS.gene23338:intron | 15.0% |
| !! | TTTATTCTATATCATTAGTT+TGG | - | chr4.4:37269572-37269591 | None:intergenic | 15.0% |
| !! | TTTCTATCCAATTAAAAAAT+GGG | - | chr4.4:37269474-37269493 | None:intergenic | 15.0% |
| !!! | TATTTTAGTACATTGAAAAT+AGG | - | chr4.4:37271856-37271875 | None:intergenic | 15.0% |
| !!! | TTTTCTATCCAATTAAAAAA+TGG | - | chr4.4:37269475-37269494 | None:intergenic | 15.0% |
| !!! | TTTTTAGTTTATGTTCAATT+TGG | + | chr4.4:37270902-37270921 | MS.gene23338:intron | 15.0% |
| !! | AAAACGATACTATATATATG+AGG | - | chr4.4:37272458-37272477 | None:intergenic | 20.0% |
| !! | AACAGTTTAAAGAACAATTT+AGG | - | chr4.4:37271116-37271135 | None:intergenic | 20.0% |
| !! | AATAATGCCAAAAAATTTAC+TGG | - | chr4.4:37270058-37270077 | None:intergenic | 20.0% |
| !! | AATTAAATTGTCATGAATGT+TGG | - | chr4.4:37273906-37273925 | None:intergenic | 20.0% |
| !! | ACATTGTAAACAAGTAATTA+GGG | + | chr4.4:37271470-37271489 | MS.gene23338:intron | 20.0% |
| !! | ATAATGAATGGAAAAGAATA+TGG | + | chr4.4:37273463-37273482 | MS.gene23338:intron | 20.0% |
| !! | ATCTACAATATGAATTAGTA+AGG | - | chr4.4:37272576-37272595 | None:intergenic | 20.0% |
| !! | ATTAAATTGTCATGAATGTT+GGG | - | chr4.4:37273905-37273924 | None:intergenic | 20.0% |
| !! | ATTACTATTATCCCAAAAAA+AGG | - | chr4.4:37270309-37270328 | None:intergenic | 20.0% |
| !! | ATTAGTTAATATGTTTGTGT+AGG | + | chr4.4:37270142-37270161 | MS.gene23338:intron | 20.0% |
| !! | CAAACATATTAACTAATCAA+AGG | - | chr4.4:37270139-37270158 | None:intergenic | 20.0% |
| !! | CACACATCATAATTAATTAT+TGG | + | chr4.4:37271813-37271832 | MS.gene23338:intron | 20.0% |
| !! | GAACTTTCAGTTATATTTAA+AGG | - | chr4.4:37272091-37272110 | None:intergenic | 20.0% |
| !! | TACATATTGAAATTGATCAA+AGG | + | chr4.4:37270672-37270691 | MS.gene23338:intron | 20.0% |
| !! | TACATTGTAAACAAGTAATT+AGG | + | chr4.4:37271469-37271488 | MS.gene23338:intron | 20.0% |
| !! | TAGAATAAAGATAATTCGTA+TGG | + | chr4.4:37269583-37269602 | MS.gene23338:intron | 20.0% |
| !! | TCTCATTTAATTCATATTCT+TGG | + | chr4.4:37271262-37271281 | MS.gene23338:intron | 20.0% |
| !! | TTAAAATATGTTTGTGAGTT+TGG | - | chr4.4:37272263-37272282 | None:intergenic | 20.0% |
| !! | TTACTATTATCCCAAAAAAA+GGG | - | chr4.4:37270308-37270327 | None:intergenic | 20.0% |
| !! | TTCAATTTGTCTATAATGAA+TGG | + | chr4.4:37273451-37273470 | MS.gene23338:intron | 20.0% |
| !! | TTGTATTAAGCTTACTAATT+AGG | + | chr4.4:37271708-37271727 | MS.gene23338:intron | 20.0% |
| !!! | ACTGTTTTTTGTGATTATTT+GGG | + | chr4.4:37269370-37269389 | MS.gene23338:CDS | 20.0% |
| !!! | AGTTGATTTTCATTTTATAG+AGG | + | chr4.4:37272497-37272516 | MS.gene23338:intron | 20.0% |
| !!! | ATATATTTTGCTACATCAAT+GGG | + | chr4.4:37272142-37272161 | MS.gene23338:CDS | 20.0% |
| !!! | CATTTTTATGCTAAAAATCT+AGG | - | chr4.4:37273070-37273089 | None:intergenic | 20.0% |
| !!! | CTTTATTCCCATTTTTTAAT+TGG | + | chr4.4:37269464-37269483 | MS.gene23338:intron | 20.0% |
| !!! | TACTGTTTTTTGTGATTATT+TGG | + | chr4.4:37269369-37269388 | MS.gene23338:CDS | 20.0% |
| !!! | TACTTTATTTAAAGAAGCAT+TGG | - | chr4.4:37270609-37270628 | None:intergenic | 20.0% |
| !!! | TATATATTTTGCTACATCAA+TGG | + | chr4.4:37272141-37272160 | MS.gene23338:CDS | 20.0% |
| !!! | TGTTAACAACTTTATCTTTT+AGG | - | chr4.4:37273304-37273323 | None:intergenic | 20.0% |
| !!! | TTATTTTAGTGTTCTTATGT+TGG | + | chr4.4:37273001-37273020 | MS.gene23338:intron | 20.0% |
| !!! | TTTAACTCAACTCTTATTTT+AGG | + | chr4.4:37272278-37272297 | MS.gene23338:intron | 20.0% |
| !!! | TTTCTTGTTATAGTCAATAA+AGG | + | chr4.4:37270575-37270594 | MS.gene23338:intron | 20.0% |
| ! | AAGGAAATTATTCTGTTTAC+TGG | + | chr4.4:37269164-37269183 | MS.gene23338:CDS | 25.0% |
| ! | AAGTACATATACATAAGAAG+CGG | - | chr4.4:37273558-37273577 | None:intergenic | 25.0% |
| ! | AATGTACCATGAACTAAAAA+TGG | - | chr4.4:37274393-37274412 | None:intergenic | 25.0% |
| ! | ACATATTAACTAATCAAAGG+CGG | - | chr4.4:37270136-37270155 | None:intergenic | 25.0% |
| ! | ACCAATTCCATTTATAATAC+TGG | - | chr4.4:37271356-37271375 | None:intergenic | 25.0% |
| ! | ATAAAACAATTCATCAGTCA+TGG | - | chr4.4:37270364-37270383 | None:intergenic | 25.0% |
| ! | ATTTGTGACATTGATGTTAA+AGG | + | chr4.4:37272014-37272033 | MS.gene23338:CDS | 25.0% |
| ! | CAAAACACGTTAAAACATTT+CGG | - | chr4.4:37271579-37271598 | None:intergenic | 25.0% |
| ! | CTTTATATCAAAAGTCTTTC+TGG | + | chr4.4:37269743-37269762 | MS.gene23338:intron | 25.0% |
| ! | GGCACATAATATGTAAATAT+TGG | + | chr4.4:37271498-37271517 | MS.gene23338:intron | 25.0% |
| ! | GTAATTCACTAATGCATAAA+TGG | + | chr4.4:37270324-37270343 | MS.gene23338:intron | 25.0% |
| ! | TAAAACAATTCATCAGTCAT+GGG | - | chr4.4:37270363-37270382 | None:intergenic | 25.0% |
| ! | TAATATGTTTGTGTAGGATA+GGG | + | chr4.4:37270148-37270167 | MS.gene23338:intron | 25.0% |
| ! | TACTATATATATGAGGTTGA+AGG | - | chr4.4:37272451-37272470 | None:intergenic | 25.0% |
| ! | TATTGAAATTGATCAAAGGA+AGG | + | chr4.4:37270676-37270695 | MS.gene23338:intron | 25.0% |
| ! | TCAGAAAGAAAAAAAAAACC+TGG | - | chr4.4:37270454-37270473 | None:intergenic | 25.0% |
| ! | TGAAATTGCACAATAATGTA+TGG | + | chr4.4:37269317-37269336 | MS.gene23338:intron | 25.0% |
| ! | TGTGCAGATATTTAAACTAT+GGG | + | chr4.4:37271386-37271405 | MS.gene23338:CDS | 25.0% |
| ! | TGTTAAGCATGTTACAAAAT+AGG | + | chr4.4:37274442-37274461 | MS.gene23338:intron | 25.0% |
| ! | TTAAATTGTCATGAATGTTG+GGG | - | chr4.4:37273904-37273923 | None:intergenic | 25.0% |
| ! | TTAATATGTTTGTGTAGGAT+AGG | + | chr4.4:37270147-37270166 | MS.gene23338:intron | 25.0% |
| ! | TTCTTACAAACTTAATCTCT+AGG | + | chr4.4:37273499-37273518 | MS.gene23338:intron | 25.0% |
| ! | TTTATAAGTTTGTCAATGAC+TGG | + | chr4.4:37273998-37274017 | MS.gene23338:CDS | 25.0% |
| ! | TTTGAATGGTCTAGTATTAT+TGG | + | chr4.4:37274030-37274049 | MS.gene23338:CDS | 25.0% |
| !! | AATTGAAGACTGCATAATTT+TGG | + | chr4.4:37274363-37274382 | MS.gene23338:intron | 25.0% |
| !! | ATTTAAAGCAATGCATGATT+AGG | + | chr4.4:37269990-37270009 | MS.gene23338:intron | 25.0% |
| !! | TAATAGTTGCTTGAAACTTT+TGG | + | chr4.4:37270940-37270959 | MS.gene23338:intron | 25.0% |
| !! | TAGTAACACTGAATTTCTTT+TGG | + | chr4.4:37270718-37270737 | MS.gene23338:intron | 25.0% |
| !!! | AATGTTTTAACGTGTTTTGA+AGG | + | chr4.4:37271580-37271599 | MS.gene23338:intron | 25.0% |
| !!! | ATATCTGTCTTGCTTTTTAT+TGG | + | chr4.4:37270188-37270207 | MS.gene23338:CDS | 25.0% |
| !!! | ATCTTTCTTTTTGGTTTGAA+GGG | + | chr4.4:37272523-37272542 | MS.gene23338:intron | 25.0% |
| !!! | CAAAAGACCAGTAAATTTTT+TGG | + | chr4.4:37270048-37270067 | MS.gene23338:intron | 25.0% |
| !!! | CTTAAAGGCATTATGTATAT+GGG | - | chr4.4:37273798-37273817 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCACAAGGTTATT+AGG | + | chr4.4:37270233-37270252 | MS.gene23338:CDS | 25.0% |
| !!! | GATATAATAATGCATTGGTT+TGG | - | chr4.4:37268981-37269000 | None:intergenic | 25.0% |
| !!! | GTTGATTTTACAGGAAATAA+TGG | - | chr4.4:37273424-37273443 | None:intergenic | 25.0% |
| !!! | TATCTGTCTTGCTTTTTATT+GGG | + | chr4.4:37270189-37270208 | MS.gene23338:CDS | 25.0% |
| AAAACAATTCATCAGTCATG+GGG | - | chr4.4:37270362-37270381 | None:intergenic | 30.0% | |
| AAAAGAAGCCTTAATTCCAA+AGG | - | chr4.4:37272837-37272856 | None:intergenic | 30.0% | |
| AAACAAGTAATTAGGGTTGT+AGG | + | chr4.4:37271477-37271496 | MS.gene23338:intron | 30.0% | |
| AAAGCAGAATCCTATTTGAA+AGG | - | chr4.4:37270637-37270656 | None:intergenic | 30.0% | |
| AACATCAATGTCACAAATAC+AGG | - | chr4.4:37272012-37272031 | None:intergenic | 30.0% | |
| AAGCACATTAAACTATTCTC+AGG | - | chr4.4:37271158-37271177 | None:intergenic | 30.0% | |
| AAGTAGACAACCTTTCAAAT+AGG | + | chr4.4:37270624-37270643 | MS.gene23338:intron | 30.0% | |
| AATCCTAATCTGTTTCACAT+AGG | + | chr4.4:37273115-37273134 | MS.gene23338:intron | 30.0% | |
| AGAACAATTTAGGCATTAAG+AGG | - | chr4.4:37271106-37271125 | None:intergenic | 30.0% | |
| AGCACATTAAACTATTCTCA+GGG | - | chr4.4:37271157-37271176 | None:intergenic | 30.0% | |
| ATCACAAAGATATACGTTCA+AGG | - | chr4.4:37274563-37274582 | None:intergenic | 30.0% | |
| ATCGATCCAATAAGTAAACA+AGG | - | chr4.4:37270768-37270787 | None:intergenic | 30.0% | |
| ATGAATTAGTAAGGAGAACA+TGG | - | chr4.4:37272567-37272586 | None:intergenic | 30.0% | |
| ATTGATGAATATGCGTGAAT+GGG | + | chr4.4:37269496-37269515 | MS.gene23338:intron | 30.0% | |
| CAGAGCTACTAAATAGTTAA+GGG | - | chr4.4:37273259-37273278 | None:intergenic | 30.0% | |
| CCATATACATAATGCCTTTA+AGG | + | chr4.4:37273796-37273815 | MS.gene23338:intron | 30.0% | |
| CTACTAAATAGTTAAGGGTT+AGG | - | chr4.4:37273254-37273273 | None:intergenic | 30.0% | |
| CTGTGCAGATATTTAAACTA+TGG | + | chr4.4:37271385-37271404 | MS.gene23338:CDS | 30.0% | |
| GACATAGTGTTTATTAGGTT+CGG | + | chr4.4:37274261-37274280 | MS.gene23338:intron | 30.0% | |
| GAGATTAAGTTTGTAAGAAG+TGG | - | chr4.4:37273498-37273517 | None:intergenic | 30.0% | |
| GATAAAGTTGTTAACAAGAC+AGG | + | chr4.4:37273308-37273327 | MS.gene23338:intron | 30.0% | |
| GCCAGTATTATAAATGGAAT+TGG | + | chr4.4:37271352-37271371 | MS.gene23338:CDS | 30.0% | |
| GTATACTATTGAGTGACAAA+AGG | - | chr4.4:37271012-37271031 | None:intergenic | 30.0% | |
| TAATCACAAAAAACAGTAGC+AGG | - | chr4.4:37269367-37269386 | None:intergenic | 30.0% | |
| TACATTGTCGTTACAACTAA+CGG | - | chr4.4:37273663-37273682 | None:intergenic | 30.0% | |
| TAGCACTTTCTATGAATTCT+AGG | - | chr4.4:37274212-37274231 | None:intergenic | 30.0% | |
| TATATCTTTGTGATCAAGTG+TGG | + | chr4.4:37274569-37274588 | MS.gene23338:CDS | 30.0% | |
| TATCTGAGAAAAGTCATTCA+TGG | - | chr4.4:37270981-37271000 | None:intergenic | 30.0% | |
| TATTGATGAATATGCGTGAA+TGG | + | chr4.4:37269495-37269514 | MS.gene23338:intron | 30.0% | |
| TCGAGGATATAATAATGCAT+TGG | - | chr4.4:37268986-37269005 | None:intergenic | 30.0% | |
| TCTTGGTATGAAAGATTCTT+GGG | + | chr4.4:37271306-37271325 | MS.gene23338:CDS | 30.0% | |
| TGAGTTTATAGTATCTTGAC+AGG | + | chr4.4:37272636-37272655 | MS.gene23338:intron | 30.0% | |
| TGATCAGGTGTAAAAATGTA+GGG | - | chr4.4:37272751-37272770 | None:intergenic | 30.0% | |
| TGTAACGACAATGTAAGTAT+AGG | + | chr4.4:37273668-37273687 | MS.gene23338:intron | 30.0% | |
| TGTCAAGATACTATAAACTC+AGG | - | chr4.4:37272637-37272656 | None:intergenic | 30.0% | |
| TGTTTAAAGACTTCCTTACA+TGG | + | chr4.4:37273523-37273542 | MS.gene23338:intron | 30.0% | |
| TTATGCTAAAAATCTAGGTC+AGG | - | chr4.4:37273065-37273084 | None:intergenic | 30.0% | |
| TTCCTGTAAAATCAACAGTT+TGG | + | chr4.4:37273428-37273447 | MS.gene23338:intron | 30.0% | |
| TTGTCATTGTTGGATGTATA+CGG | - | chr4.4:37269956-37269975 | None:intergenic | 30.0% | |
| TTGTTGTAACATCTGTTACT+TGG | + | chr4.4:37272719-37272738 | MS.gene23338:CDS | 30.0% | |
| TTTGGATTATAGAATCCGAA+CGG | - | chr4.4:37271625-37271644 | None:intergenic | 30.0% | |
| ! | AATATAGAAGCTTTAGCTCA+TGG | - | chr4.4:37271734-37271753 | None:intergenic | 30.0% |
| ! | AGTCTCATATCGACTATAAA+AGG | + | chr4.4:37273743-37273762 | MS.gene23338:intron | 30.0% |
| ! | AGTTGATGTATGGAGTAAAT+CGG | + | chr4.4:37272376-37272395 | MS.gene23338:CDS | 30.0% |
| ! | ATAAGTTTGTTCGCATACTT+GGG | - | chr4.4:37271443-37271462 | None:intergenic | 30.0% |
| ! | ATCAAAAGTCTTTCTGGTAA+TGG | + | chr4.4:37269749-37269768 | MS.gene23338:intron | 30.0% |
| ! | GCACAATAATGTATGGATTT+TGG | + | chr4.4:37269324-37269343 | MS.gene23338:intron | 30.0% |
| ! | TAGAGGATCATCTTTCTTTT+TGG | + | chr4.4:37272514-37272533 | MS.gene23338:intron | 30.0% |
| ! | TATAAGTTTGTTCGCATACT+TGG | - | chr4.4:37271444-37271463 | None:intergenic | 30.0% |
| ! | TTCAGTGTTACTAAATCAAG+CGG | - | chr4.4:37270711-37270730 | None:intergenic | 30.0% |
| ! | TTTATGCACACAGAACTTTT+AGG | + | chr4.4:37270100-37270119 | MS.gene23338:intron | 30.0% |
| !! | ATTAGGATTTTCAAGAAGCT+TGG | - | chr4.4:37273104-37273123 | None:intergenic | 30.0% |
| !! | CCTTAAAGGCATTATGTATA+TGG | - | chr4.4:37273799-37273818 | None:intergenic | 30.0% |
| !! | TATTGGTAACAACTTTTCCT+TGG | + | chr4.4:37274047-37274066 | MS.gene23338:intron | 30.0% |
| !! | TTATTAGGTTCGGTTTTCAT+CGG | + | chr4.4:37274271-37274290 | MS.gene23338:intron | 30.0% |
| !!! | AACCAAACTGTTGATTTTAC+AGG | - | chr4.4:37273433-37273452 | None:intergenic | 30.0% |
| !!! | ACATAATGCCTTTAAGGTTT+TGG | + | chr4.4:37273802-37273821 | MS.gene23338:intron | 30.0% |
| !!! | ACGTGTTTTGAAGGTTTTTA+TGG | + | chr4.4:37271589-37271608 | MS.gene23338:intron | 30.0% |
| !!! | CATCTTTCTTTTTGGTTTGA+AGG | + | chr4.4:37272522-37272541 | MS.gene23338:intron | 30.0% |
| !!! | CGTGTTTTGAAGGTTTTTAT+GGG | + | chr4.4:37271590-37271609 | MS.gene23338:intron | 30.0% |
| !!! | GTGTTTTGAAGGTTTTTATG+GGG | + | chr4.4:37271591-37271610 | MS.gene23338:intron | 30.0% |
| AAAAAATGTGAGTGTGACCT+TGG | + | chr4.4:37269817-37269836 | MS.gene23338:intron | 35.0% | |
| AAAAGAAGCAACATGCAACA+TGG | - | chr4.4:37273936-37273955 | None:intergenic | 35.0% | |
| AAAGCAATAGTTTACTCCTC+AGG | - | chr4.4:37271205-37271224 | None:intergenic | 35.0% | |
| AAATTCAAGAACTAACCTCC+TGG | - | chr4.4:37272783-37272802 | None:intergenic | 35.0% | |
| AAGAACAAACCTGTTTAGCA+AGG | - | chr4.4:37269447-37269466 | None:intergenic | 35.0% | |
| AAGCAATAGTTTACTCCTCA+GGG | - | chr4.4:37271204-37271223 | None:intergenic | 35.0% | |
| ACAAAGATATACGTTCAAGG+CGG | - | chr4.4:37274560-37274579 | None:intergenic | 35.0% | |
| ACAGGGACATAGTGTTTATT+AGG | + | chr4.4:37274256-37274275 | MS.gene23338:intron | 35.0% | |
| ACATATACATAAGAAGCGGT+TGG | - | chr4.4:37273554-37273573 | None:intergenic | 35.0% | |
| ACCAGTAGTGCTAAAAAGAA+TGG | - | chr4.4:37272908-37272927 | None:intergenic | 35.0% | |
| AGAACAAACCTGTTTAGCAA+GGG | - | chr4.4:37269446-37269465 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGTGA+AGG | + | chr4.4:37269109-37269128 | MS.gene23338:CDS | 35.0% | |
| AGAGTTACAAAACACAAGAC+AGG | - | chr4.4:37272205-37272224 | None:intergenic | 35.0% | |
| AGCTTGTATTCAAATGTGAG+TGG | + | chr4.4:37269520-37269539 | MS.gene23338:intron | 35.0% | |
| AGGAGTAAGCCTACTTATTT+CGG | + | chr4.4:37273208-37273227 | MS.gene23338:intron | 35.0% | |
| AGTAGTGTTCTTCCTTAGAA+GGG | - | chr4.4:37268949-37268968 | None:intergenic | 35.0% | |
| ATCTCCATCCAAAACCTTAA+AGG | - | chr4.4:37273813-37273832 | None:intergenic | 35.0% | |
| ATTTAAACTATGGGATCGCT+GGG | + | chr4.4:37271395-37271414 | MS.gene23338:CDS | 35.0% | |
| CAACTCAGGCATAAATGATT+GGG | - | chr4.4:37272361-37272380 | None:intergenic | 35.0% | |
| CATAAATGATTGGGCAGTTT+GGG | - | chr4.4:37272352-37272371 | None:intergenic | 35.0% | |
| CCTACTTATTTCGGTAGAAT+GGG | + | chr4.4:37273217-37273236 | MS.gene23338:intron | 35.0% | |
| CTAACTATTGGAGCTGTATT+CGG | + | chr4.4:37272682-37272701 | MS.gene23338:CDS | 35.0% | |
| CTAAGGTCTCTTCTAACTAT+TGG | + | chr4.4:37272670-37272689 | MS.gene23338:CDS | 35.0% | |
| CTGATCAGGTGTAAAAATGT+AGG | - | chr4.4:37272752-37272771 | None:intergenic | 35.0% | |
| CTTGGTATGAAAGATTCTTG+GGG | + | chr4.4:37271307-37271326 | MS.gene23338:CDS | 35.0% | |
| GAAAATTTCACTGTCTCCTT+TGG | + | chr4.4:37272818-37272837 | MS.gene23338:intron | 35.0% | |
| GAACCTATGTGAAACAGATT+AGG | - | chr4.4:37273121-37273140 | None:intergenic | 35.0% | |
| GAGTATATGGATTCAGATGA+AGG | + | chr4.4:37269145-37269164 | MS.gene23338:CDS | 35.0% | |
| GATCAGGTGTAAAAATGTAG+GGG | - | chr4.4:37272750-37272769 | None:intergenic | 35.0% | |
| GATCCAGTAAAAGCTGAAAA+AGG | - | chr4.4:37270392-37270411 | None:intergenic | 35.0% | |
| GCAGAGCTACTAAATAGTTA+AGG | - | chr4.4:37273260-37273279 | None:intergenic | 35.0% | |
| GTATCAATGAGACTCATCAA+CGG | - | chr4.4:37269218-37269237 | None:intergenic | 35.0% | |
| GTCTTGGTATGAAAGATTCT+TGG | + | chr4.4:37271305-37271324 | MS.gene23338:intron | 35.0% | |
| TAACTATTGGAGCTGTATTC+GGG | + | chr4.4:37272683-37272702 | MS.gene23338:CDS | 35.0% | |
| TACATGTTATGCGCAATATG+TGG | + | chr4.4:37272315-37272334 | MS.gene23338:CDS | 35.0% | |
| TAGTAGTGTTCTTCCTTAGA+AGG | - | chr4.4:37268950-37268969 | None:intergenic | 35.0% | |
| TATTTAAACTATGGGATCGC+TGG | + | chr4.4:37271394-37271413 | MS.gene23338:CDS | 35.0% | |
| TCAACTCAGGCATAAATGAT+TGG | - | chr4.4:37272362-37272381 | None:intergenic | 35.0% | |
| TCCGAGTATAAAATGCCATT+GGG | - | chr4.4:37274317-37274336 | None:intergenic | 35.0% | |
| TGAAATAGTCTTTGCGATTG+AGG | + | chr4.4:37273176-37273195 | MS.gene23338:intron | 35.0% | |
| TGGTCTTTGTAGTTCATGAT+TGG | + | chr4.4:37269643-37269662 | MS.gene23338:intron | 35.0% | |
| TGTCATTGTTGGATGTATAC+GGG | - | chr4.4:37269955-37269974 | None:intergenic | 35.0% | |
| TTATAGTATCTTGACAGGCT+CGG | + | chr4.4:37272641-37272660 | MS.gene23338:intron | 35.0% | |
| TTCCGAGTATAAAATGCCAT+TGG | - | chr4.4:37274318-37274337 | None:intergenic | 35.0% | |
| TTCGTATGGCTAATGATCTT+AGG | + | chr4.4:37269597-37269616 | MS.gene23338:intron | 35.0% | |
| TTCGTGAACATATTCTGACA+GGG | + | chr4.4:37274239-37274258 | MS.gene23338:intron | 35.0% | |
| TTGTGATTATGCAGATGCAT+AGG | + | chr4.4:37272873-37272892 | MS.gene23338:intron | 35.0% | |
| TTGTGTATATTTGCTCATGC+AGG | + | chr4.4:37273958-37273977 | MS.gene23338:intron | 35.0% | |
| TTTACTCCATACATCAACTC+AGG | - | chr4.4:37272375-37272394 | None:intergenic | 35.0% | |
| TTTCGTGAACATATTCTGAC+AGG | + | chr4.4:37274238-37274257 | MS.gene23338:intron | 35.0% | |
| ! | AACTGAAAGTTCTGATGTGT+AGG | + | chr4.4:37272099-37272118 | MS.gene23338:intron | 35.0% |
| ! | ATCGATTGCTACTTCGAATA+TGG | + | chr4.4:37269411-37269430 | MS.gene23338:CDS | 35.0% |
| ! | ATGACTTTTCTCAGATAGCA+AGG | + | chr4.4:37270984-37271003 | MS.gene23338:intron | 35.0% |
| ! | CATTTTTACACCTGATCAGA+TGG | + | chr4.4:37272753-37272772 | MS.gene23338:CDS | 35.0% |
| ! | GGAATTAAGGCTTCTTTTAG+TGG | + | chr4.4:37272839-37272858 | MS.gene23338:intron | 35.0% |
| ! | GGCTAATGATCTTAGGTTTT+GGG | + | chr4.4:37269604-37269623 | MS.gene23338:intron | 35.0% |
| ! | TCCAACAATGACAAAAGCAT+AGG | + | chr4.4:37269962-37269981 | MS.gene23338:intron | 35.0% |
| ! | TCCCAATGGCATTTTATACT+CGG | + | chr4.4:37274313-37274332 | MS.gene23338:intron | 35.0% |
| ! | TCCTATGCTTTTGTCATTGT+TGG | - | chr4.4:37269966-37269985 | None:intergenic | 35.0% |
| ! | TCTTTCTAGCAGTGCAATTA+GGG | + | chr4.4:37273629-37273648 | MS.gene23338:intron | 35.0% |
| ! | TGGCTAATGATCTTAGGTTT+TGG | + | chr4.4:37269603-37269622 | MS.gene23338:intron | 35.0% |
| ! | TTCACTTGCTGGATTTCAAT+GGG | + | chr4.4:37274175-37274194 | MS.gene23338:CDS | 35.0% |
| ! | TTTCACTTGCTGGATTTCAA+TGG | + | chr4.4:37274174-37274193 | MS.gene23338:CDS | 35.0% |
| !! | ACTGGATGCTTTTGTTTGAA+TGG | + | chr4.4:37274016-37274035 | MS.gene23338:CDS | 35.0% |
| !! | AGCAAAGCTCTAAATGAGAA+GGG | + | chr4.4:37271919-37271938 | MS.gene23338:CDS | 35.0% |
| !! | TAATGCATTGGTTTGGTGAA+TGG | - | chr4.4:37268974-37268993 | None:intergenic | 35.0% |
| !! | TCCATTCTTTTTAGCACTAC+TGG | + | chr4.4:37272904-37272923 | MS.gene23338:CDS | 35.0% |
| !! | TCTTTTAGGAGAACTGATCT+TGG | - | chr4.4:37273290-37273309 | None:intergenic | 35.0% |
| !! | TGTTGGTAGTGTTATTCAGT+TGG | + | chr4.4:37273018-37273037 | MS.gene23338:intron | 35.0% |
| !! | TTTATGCCTGAGTTGATGTA+TGG | + | chr4.4:37272366-37272385 | MS.gene23338:CDS | 35.0% |
| !!! | AATGCCTTTAAGGTTTTGGA+TGG | + | chr4.4:37273806-37273825 | MS.gene23338:intron | 35.0% |
| !!! | ATTTTGGTTTCTACATGAGC+AGG | + | chr4.4:37269340-37269359 | MS.gene23338:intron | 35.0% |
| !!! | CGGATTTTAGAATCCGAATA+GGG | - | chr4.4:37271559-37271578 | None:intergenic | 35.0% |
| !!! | CTTATTTTAGGTCATGCTTC+AGG | + | chr4.4:37272290-37272309 | MS.gene23338:intron | 35.0% |
| !!! | CTTTTTATTGGGTTAGCATG+TGG | + | chr4.4:37270200-37270219 | MS.gene23338:CDS | 35.0% |
| !!! | GCTGATTTGGTCTTTTTCTT+CGG | - | chr4.4:37269075-37269094 | None:intergenic | 35.0% |
| !!! | TAATGATCTTAGGTTTTGGG+TGG | + | chr4.4:37269607-37269626 | MS.gene23338:intron | 35.0% |
| !!! | TCGGATTTTAGAATCCGAAT+AGG | - | chr4.4:37271560-37271579 | None:intergenic | 35.0% |
| !!! | TCTTTTGGTGTTAGATTCGA+GGG | + | chr4.4:37270733-37270752 | MS.gene23338:intron | 35.0% |
| !!! | TTCTTTTGGTGTTAGATTCG+AGG | + | chr4.4:37270732-37270751 | MS.gene23338:intron | 35.0% |
| !!! | TTGCCTTTTTCAGCTTTTAC+TGG | + | chr4.4:37270386-37270405 | MS.gene23338:intron | 35.0% |
| !!! | TTTTTGGGTTCAAATGTGAG+TGG | + | chr4.4:37273718-37273737 | MS.gene23338:intron | 35.0% |
| AAATGCCATTGGGAGATAGA+AGG | - | chr4.4:37274307-37274326 | None:intergenic | 40.0% | |
| AAATTCCTTCCCTGAAGGAA+TGG | - | chr4.4:37271965-37271984 | None:intergenic | 40.0% | |
| AACTGGTTGAGCAGAGTATA+TGG | + | chr4.4:37269132-37269151 | MS.gene23338:CDS | 40.0% | |
| AATGTGCAGATAGACAGCAA+AGG | - | chr4.4:37272231-37272250 | None:intergenic | 40.0% | |
| AATTCATCAGTCATGGGGTA+GGG | - | chr4.4:37270357-37270376 | None:intergenic | 40.0% | |
| ACCAAATAACTATACCCCAG+TGG | - | chr4.4:37274597-37274616 | None:intergenic | 40.0% | |
| AGAAAAAGACCAAATCAGCG+AGG | + | chr4.4:37269076-37269095 | MS.gene23338:CDS | 40.0% | |
| AGAAGAAGAAGTGAAGGAAC+TGG | + | chr4.4:37269115-37269134 | MS.gene23338:CDS | 40.0% | |
| AGTAAATCGGAGTTTGGCAA+AGG | + | chr4.4:37272389-37272408 | MS.gene23338:CDS | 40.0% | |
| AGTTCAAAGTCTCACTTGTG+TGG | - | chr4.4:37269901-37269920 | None:intergenic | 40.0% | |
| AGTTCACTAGGTATATGCTC+TGG | - | chr4.4:37271181-37271200 | None:intergenic | 40.0% | |
| ATCAATAGGGTGGGAAAAGA+AGG | + | chr4.4:37271665-37271684 | MS.gene23338:intron | 40.0% | |
| CAACGATCCACTACTATGAT+CGG | - | chr4.4:37273600-37273619 | None:intergenic | 40.0% | |
| CATAACCAAAGACCAATAGC+AGG | - | chr4.4:37269191-37269210 | None:intergenic | 40.0% | |
| CCCATTCTACCGAAATAAGT+AGG | - | chr4.4:37273220-37273239 | None:intergenic | 40.0% | |
| CTCATTGATACTGCTGTTGT+TGG | + | chr4.4:37269227-37269246 | MS.gene23338:CDS | 40.0% | |
| CTGGACATAAGTATTAGCTG+CGG | - | chr4.4:37270435-37270454 | None:intergenic | 40.0% | |
| GATCTGCATCGAGGTAAATT+GGG | - | chr4.4:37274120-37274139 | None:intergenic | 40.0% | |
| GCATAAATGATTGGGCAGTT+TGG | - | chr4.4:37272353-37272372 | None:intergenic | 40.0% | |
| GCATTATTATATCCTCGAGC+CGG | + | chr4.4:37268988-37269007 | MS.gene23338:CDS | 40.0% | |
| GCCTACTTATTTCGGTAGAA+TGG | + | chr4.4:37273216-37273235 | MS.gene23338:intron | 40.0% | |
| GCTGCTGCCAGTATTATAAA+TGG | + | chr4.4:37271346-37271365 | MS.gene23338:CDS | 40.0% | |
| GGATTTCAATGGGTAAGACT+CGG | + | chr4.4:37274185-37274204 | MS.gene23338:intron | 40.0% | |
| GTACTTTCATGATCCTACTC+AGG | + | chr4.4:37273572-37273591 | MS.gene23338:intron | 40.0% | |
| GTATGGAGTAAATCGGAGTT+TGG | + | chr4.4:37272383-37272402 | MS.gene23338:CDS | 40.0% | |
| GTTCTGTGTGCATAAAGTCA+TGG | - | chr4.4:37270096-37270115 | None:intergenic | 40.0% | |
| TATATTTGCTCATGCAGGCT+GGG | + | chr4.4:37273963-37273982 | MS.gene23338:intron | 40.0% | |
| TATGTTTGTGTAGGATAGGG+AGG | + | chr4.4:37270151-37270170 | MS.gene23338:intron | 40.0% | |
| TCATAGGGTGGGAAAAGTAA+TGG | - | chr4.4:37271524-37271543 | None:intergenic | 40.0% | |
| TCGCTCTTAGTTCAATGTGA+TGG | - | chr4.4:37269878-37269897 | None:intergenic | 40.0% | |
| TCTTGTTGGTCCATGACATT+GGG | + | chr4.4:37273847-37273866 | MS.gene23338:intron | 40.0% | |
| TGCACTGCTAGAAAGACTAT+GGG | - | chr4.4:37273625-37273644 | None:intergenic | 40.0% | |
| TGGACATAAGTATTAGCTGC+GGG | - | chr4.4:37270434-37270453 | None:intergenic | 40.0% | |
| TGTCGATACAATTCAGTGCT+TGG | + | chr4.4:37274467-37274486 | MS.gene23338:intron | 40.0% | |
| TTCCATGGAGCCTAAAACAA+TGG | + | chr4.4:37269846-37269865 | MS.gene23338:intron | 40.0% | |
| TTGCACTGCTAGAAAGACTA+TGG | - | chr4.4:37273626-37273645 | None:intergenic | 40.0% | |
| TTTAAACTATGGGATCGCTG+GGG | + | chr4.4:37271396-37271415 | MS.gene23338:CDS | 40.0% | |
| TTTCCTTCACCATTCCTTCA+GGG | + | chr4.4:37271953-37271972 | MS.gene23338:CDS | 40.0% | |
| ! | ACACTTGAGGGGGATATTTT+TGG | + | chr4.4:37273702-37273721 | MS.gene23338:intron | 40.0% |
| ! | ACAGGTTTGCATCGATAACT+CGG | + | chr4.4:37273326-37273345 | MS.gene23338:intron | 40.0% |
| ! | AGTGTTACTAAATCAAGCGG+AGG | - | chr4.4:37270708-37270727 | None:intergenic | 40.0% |
| ! | ATGGAGTCGTTGGTTAGTAA+TGG | + | chr4.4:37269768-37269787 | MS.gene23338:intron | 40.0% |
| ! | ATGGTCCACTCCATTGTTTT+AGG | - | chr4.4:37269859-37269878 | None:intergenic | 40.0% |
| ! | CACTTGAGGGGGATATTTTT+GGG | + | chr4.4:37273703-37273722 | MS.gene23338:intron | 40.0% |
| ! | GTCTTTCTAGCAGTGCAATT+AGG | + | chr4.4:37273628-37273647 | MS.gene23338:intron | 40.0% |
| ! | TAGAAGAAACCTCGCTGATT+TGG | - | chr4.4:37269088-37269107 | None:intergenic | 40.0% |
| ! | TCAATTGAACTCGCTGCTTT+AGG | + | chr4.4:37269260-37269279 | MS.gene23338:CDS | 40.0% |
| ! | TCAATTTTTGCAGCTCAGAC+TGG | - | chr4.4:37274349-37274368 | None:intergenic | 40.0% |
| ! | TGAAAGTTCTGATGTGTAGG+TGG | + | chr4.4:37272102-37272121 | MS.gene23338:intron | 40.0% |
| ! | TGCGATTGAGGTGCTAAAAA+AGG | + | chr4.4:37273188-37273207 | MS.gene23338:intron | 40.0% |
| ! | TGGGTGGAAATGTAGTGTTT+TGG | + | chr4.4:37269623-37269642 | MS.gene23338:intron | 40.0% |
| ! | TTTTCCTTCACCATTCCTTC+AGG | + | chr4.4:37271952-37271971 | MS.gene23338:CDS | 40.0% |
| !! | CACTGTCTCCTTTGGAATTA+AGG | + | chr4.4:37272826-37272845 | MS.gene23338:intron | 40.0% |
| !! | GAGCAAAGCTCTAAATGAGA+AGG | + | chr4.4:37271918-37271937 | MS.gene23338:CDS | 40.0% |
| !! | GCATGGCCTTGTTTACTTAT+TGG | + | chr4.4:37270759-37270778 | MS.gene23338:CDS | 40.0% |
| !! | GCTATTGGTCTTTGGTTATG+CGG | + | chr4.4:37269191-37269210 | MS.gene23338:CDS | 40.0% |
| !!! | ACAACTTTTCCTTGGTTTGC+TGG | + | chr4.4:37274055-37274074 | MS.gene23338:intron | 40.0% |
| !!! | CAGCGATGCTTTTTTTCACA+AGG | + | chr4.4:37270225-37270244 | MS.gene23338:CDS | 40.0% |
| !!! | GGAGCTCCATTTTTAGTTCA+TGG | + | chr4.4:37274384-37274403 | MS.gene23338:intron | 40.0% |
| !!! | TAAGGTTTTGGATGGAGATC+TGG | + | chr4.4:37273814-37273833 | MS.gene23338:intron | 40.0% |
| AAATGTGAGTGTGACCTTGG+TGG | + | chr4.4:37269820-37269839 | MS.gene23338:intron | 45.0% | |
| AAGATATACGTTCAAGGCGG+TGG | - | chr4.4:37274557-37274576 | None:intergenic | 45.0% | |
| ACGCGAGAAATCAATAGGGT+GGG | + | chr4.4:37271656-37271675 | MS.gene23338:intron | 45.0% | |
| AGAGCACGCGAGAAATCAAT+AGG | + | chr4.4:37271651-37271670 | MS.gene23338:intron | 45.0% | |
| AGATATACGTTCAAGGCGGT+GGG | - | chr4.4:37274556-37274575 | None:intergenic | 45.0% | |
| AGTTGTATCGGAAACTGTGC+GGG | + | chr4.4:37274505-37274524 | MS.gene23338:CDS | 45.0% | |
| ATCCCAGTCCCCAAAACATA+GGG | - | chr4.4:37269685-37269704 | None:intergenic | 45.0% | |
| ATGTGAGACTCACACTTGAG+GGG | + | chr4.4:37273691-37273710 | MS.gene23338:intron | 45.0% | |
| ATTCAGTGCTTGGAAACTGC+AGG | + | chr4.4:37274477-37274496 | MS.gene23338:intron | 45.0% | |
| CAAAAACAGGCCCAATGTCA+TGG | - | chr4.4:37273860-37273879 | None:intergenic | 45.0% | |
| CAAGACTGCGTGAAAGAATG+TGG | - | chr4.4:37271291-37271310 | None:intergenic | 45.0% | |
| CAATTCATCAGTCATGGGGT+AGG | - | chr4.4:37270358-37270377 | None:intergenic | 45.0% | |
| CACATTCTTTCACGCAGTCT+TGG | + | chr4.4:37271289-37271308 | MS.gene23338:intron | 45.0% | |
| CAGATCCTATCCAGCAGATA+TGG | + | chr4.4:37274134-37274153 | MS.gene23338:intron | 45.0% | |
| CGCAGCTAATACTTATGTCC+AGG | + | chr4.4:37270433-37270452 | MS.gene23338:CDS | 45.0% | |
| CTATGTACACCAGCAAACCA+AGG | - | chr4.4:37274067-37274086 | None:intergenic | 45.0% | |
| CTCTTGTTGGTCCATGACAT+TGG | + | chr4.4:37273846-37273865 | MS.gene23338:intron | 45.0% | |
| CTGGTATGCTCATGTTCGAT+TGG | + | chr4.4:37272962-37272981 | MS.gene23338:intron | 45.0% | |
| CTGTTTACTGGACCTGCTAT+TGG | + | chr4.4:37269176-37269195 | MS.gene23338:CDS | 45.0% | |
| GACAGAAATTCCTTCCCTGA+AGG | - | chr4.4:37271970-37271989 | None:intergenic | 45.0% | |
| GAGCACGCGAGAAATCAATA+GGG | + | chr4.4:37271652-37271671 | MS.gene23338:intron | 45.0% | |
| GAGTTGTATCGGAAACTGTG+CGG | + | chr4.4:37274504-37274523 | MS.gene23338:CDS | 45.0% | |
| GATACTGCTGTTGTTGGTCA+AGG | + | chr4.4:37269233-37269252 | MS.gene23338:CDS | 45.0% | |
| GATCGATTGCTCAAAGTGCA+AGG | + | chr4.4:37270781-37270800 | MS.gene23338:CDS | 45.0% | |
| GATGTGAGACTCACACTTGA+GGG | + | chr4.4:37273690-37273709 | MS.gene23338:intron | 45.0% | |
| GCAAACCATATCTGCTGGAT+AGG | - | chr4.4:37274142-37274161 | None:intergenic | 45.0% | |
| GCCACTGGGGTATAGTTATT+TGG | + | chr4.4:37274593-37274612 | MS.gene23338:CDS | 45.0% | |
| GGATCTGCATCGAGGTAAAT+TGG | - | chr4.4:37274121-37274140 | None:intergenic | 45.0% | |
| GGATGTATACGGGTGTATAC+AGG | - | chr4.4:37269945-37269964 | None:intergenic | 45.0% | |
| GTATATTTGCTCATGCAGGC+TGG | + | chr4.4:37273962-37273981 | MS.gene23338:intron | 45.0% | |
| GTGTTCTTCCTTAGAAGGGA+AGG | - | chr4.4:37268945-37268964 | None:intergenic | 45.0% | |
| TAGGCATTAAGAGGAGAGAG+AGG | - | chr4.4:37271097-37271116 | None:intergenic | 45.0% | |
| TAGTAATGGCGGTGAGAGTA+CGG | + | chr4.4:37269782-37269801 | MS.gene23338:intron | 45.0% | |
| TATACCTAGTGAACTCCCTG+AGG | + | chr4.4:37271186-37271205 | MS.gene23338:intron | 45.0% | |
| TATGGGGTGTATATGCCGTT+CGG | + | chr4.4:37271607-37271626 | MS.gene23338:intron | 45.0% | |
| TCATGGACCAACAAGAGATC+AGG | - | chr4.4:37273843-37273862 | None:intergenic | 45.0% | |
| TCTTCCTTAGAAGGGAAGGT+GGG | - | chr4.4:37268941-37268960 | None:intergenic | 45.0% | |
| TGGAGCCTAAAACAATGGAG+TGG | + | chr4.4:37269851-37269870 | MS.gene23338:intron | 45.0% | |
| TTCCCACCCTATGAGTTTCT+CGG | + | chr4.4:37271530-37271549 | MS.gene23338:intron | 45.0% | |
| TTCTTCCTTAGAAGGGAAGG+TGG | - | chr4.4:37268942-37268961 | None:intergenic | 45.0% | |
| ! | CTGTTGCTCCCTATGTTTTG+GGG | + | chr4.4:37269674-37269693 | MS.gene23338:intron | 45.0% |
| ! | GAGTCGTTGGTTAGTAATGG+CGG | + | chr4.4:37269771-37269790 | MS.gene23338:intron | 45.0% |
| ! | GATATGGTTTGCAAGGCTGT+TGG | + | chr4.4:37274150-37274169 | MS.gene23338:CDS | 45.0% |
| ! | GCTGTTGCTCCCTATGTTTT+GGG | + | chr4.4:37269673-37269692 | MS.gene23338:intron | 45.0% |
| ! | GTTTGCATCGATAACTCGGA+GGG | + | chr4.4:37273330-37273349 | MS.gene23338:intron | 45.0% |
| ! | TCCAGCAGATATGGTTTGCA+AGG | + | chr4.4:37274143-37274162 | MS.gene23338:CDS | 45.0% |
| ! | TGCTGTTGCTCCCTATGTTT+TGG | + | chr4.4:37269672-37269691 | MS.gene23338:intron | 45.0% |
| !! | AAGTTAACTTGCCGAGAGAG+CGG | + | chr4.4:37269712-37269731 | MS.gene23338:intron | 45.0% |
| !! | ATCAACGTGCACTGCTTTTC+AGG | + | chr4.4:37271876-37271895 | MS.gene23338:intron | 45.0% |
| !! | CTTTCTGGTAATGGAGTCGT+TGG | + | chr4.4:37269758-37269777 | MS.gene23338:intron | 45.0% |
| !! | TTGGTGTTAGATTCGAGGGT+TGG | + | chr4.4:37270737-37270756 | MS.gene23338:intron | 45.0% |
| !!! | AGCTGTATTCGGGTTGCTTT+TGG | + | chr4.4:37272693-37272712 | MS.gene23338:CDS | 45.0% |
| !!! | CCAGTTGCGTCCCTTTTTTT+GGG | + | chr4.4:37270295-37270314 | MS.gene23338:intron | 45.0% |
| !!! | CTCCATTGTTTTAGGCTCCA+TGG | - | chr4.4:37269851-37269870 | None:intergenic | 45.0% |
| !!! | CTGTATTCGGGTTGCTTTTG+GGG | + | chr4.4:37272695-37272714 | MS.gene23338:CDS | 45.0% |
| !!! | GCTGTATTCGGGTTGCTTTT+GGG | + | chr4.4:37272694-37272713 | MS.gene23338:CDS | 45.0% |
| !!! | TCCAGTTGCGTCCCTTTTTT+TGG | + | chr4.4:37270294-37270313 | MS.gene23338:intron | 45.0% |
| !! | ATTTAATAATATTATACTAT+TGG | + | chr4.4:37271237-37271256 | MS.gene23338:intron | 5.0% |
| !! | TTTAATAATATTATACTATT+GGG | + | chr4.4:37271238-37271257 | MS.gene23338:intron | 5.0% |
| AAGATCTACTCCCGCTCTCT+CGG | - | chr4.4:37269726-37269745 | None:intergenic | 50.0% | |
| ACCCGAGAAACTCATAGGGT+GGG | - | chr4.4:37271535-37271554 | None:intergenic | 50.0% | |
| ACCTGATCAGATGGTCATCC+AGG | + | chr4.4:37272762-37272781 | MS.gene23338:CDS | 50.0% | |
| ACTATGATCGGAGCCTGAGT+AGG | - | chr4.4:37273588-37273607 | None:intergenic | 50.0% | |
| AGATTCTTGGGGACCCTTGA+AGG | + | chr4.4:37271318-37271337 | MS.gene23338:CDS | 50.0% | |
| AGTTTCTCGGGTGCCCTATT+CGG | + | chr4.4:37271543-37271562 | MS.gene23338:intron | 50.0% | |
| ATACCAGCAATGTTCCCTCC+AGG | - | chr4.4:37272949-37272968 | None:intergenic | 50.0% | |
| CACGCGAGAAATCAATAGGG+TGG | + | chr4.4:37271655-37271674 | MS.gene23338:intron | 50.0% | |
| CCCAAAAAAAGGGACGCAAC+TGG | - | chr4.4:37270298-37270317 | None:intergenic | 50.0% | |
| CTGGTGTCCTGATCTCTTGT+TGG | + | chr4.4:37273833-37273852 | MS.gene23338:intron | 50.0% | |
| CTTCACCATTCCTTCAGGGA+AGG | + | chr4.4:37271957-37271976 | MS.gene23338:CDS | 50.0% | |
| CTTCCCTGAAGGAATGGTGA+AGG | - | chr4.4:37271959-37271978 | None:intergenic | 50.0% | |
| GAAACTCGAAGCGACTGTTC+CGG | - | chr4.4:37269010-37269029 | None:intergenic | 50.0% | |
| GATCCCAGTCCCCAAAACAT+AGG | - | chr4.4:37269686-37269705 | None:intergenic | 50.0% | |
| GCCTTGCAAACCATATCTGC+TGG | - | chr4.4:37274147-37274166 | None:intergenic | 50.0% | |
| GCTCTCTCGGCAAGTTAACT+TGG | - | chr4.4:37269713-37269732 | None:intergenic | 50.0% | |
| GGAGCAACGAGAGCAAAAAC+AGG | - | chr4.4:37273873-37273892 | None:intergenic | 50.0% | |
| GGATGTGAGACTCACACTTG+AGG | + | chr4.4:37273689-37273708 | MS.gene23338:intron | 50.0% | |
| GTCATGAATGTTGGGGAGTC+CGG | - | chr4.4:37273897-37273916 | None:intergenic | 50.0% | |
| GTTGTATCGGAAACTGTGCG+GGG | + | chr4.4:37274506-37274525 | MS.gene23338:CDS | 50.0% | |
| TACTCCTCAGGGAGTTCACT+AGG | - | chr4.4:37271193-37271212 | None:intergenic | 50.0% | |
| TCAGGCTCCGATCATAGTAG+TGG | + | chr4.4:37273590-37273609 | MS.gene23338:intron | 50.0% | |
| TCATGAATGTTGGGGAGTCC+GGG | - | chr4.4:37273896-37273915 | None:intergenic | 50.0% | |
| TCCCACCCTATGAGTTTCTC+GGG | + | chr4.4:37271531-37271550 | MS.gene23338:intron | 50.0% | |
| TCCTGGATGACCATCTGATC+AGG | - | chr4.4:37272766-37272785 | None:intergenic | 50.0% | |
| TGATCAGATGGTCATCCAGG+AGG | + | chr4.4:37272765-37272784 | MS.gene23338:CDS | 50.0% | |
| TGCTACTGCCCTTGCTAAAC+AGG | + | chr4.4:37269435-37269454 | MS.gene23338:CDS | 50.0% | |
| TGTGAGACTCACACTTGAGG+GGG | + | chr4.4:37273692-37273711 | MS.gene23338:intron | 50.0% | |
| TTGCGCCTTCTATCTCCCAA+TGG | + | chr4.4:37274299-37274318 | MS.gene23338:intron | 50.0% | |
| ! | GCGGTTGGTACTTCCATGTA+AGG | - | chr4.4:37273539-37273558 | None:intergenic | 50.0% |
| ! | GGGAGATAGAAGGCGCAAAA+GGG | - | chr4.4:37274297-37274316 | None:intergenic | 50.0% |
| ! | GGTTTGCATCGATAACTCGG+AGG | + | chr4.4:37273329-37273348 | MS.gene23338:intron | 50.0% |
| ! | GTTAGATTCGAGGGTTGGCA+TGG | + | chr4.4:37270742-37270761 | MS.gene23338:intron | 50.0% |
| ! | TGGGAGATAGAAGGCGCAAA+AGG | - | chr4.4:37274298-37274317 | None:intergenic | 50.0% |
| !! | AGTTAACTTGCCGAGAGAGC+GGG | + | chr4.4:37269713-37269732 | MS.gene23338:intron | 50.0% |
| !! | CTGCAGGTGCTGAGTTGTAT+CGG | + | chr4.4:37274493-37274512 | MS.gene23338:intron | 50.0% |
| !! | CTGGACCTGCTATTGGTCTT+TGG | + | chr4.4:37269183-37269202 | MS.gene23338:CDS | 50.0% |
| !! | TGATCAAGTGTGGTGCCACT+GGG | + | chr4.4:37274579-37274598 | MS.gene23338:CDS | 50.0% |
| !!! | CTCCCTATGTTTTGGGGACT+GGG | + | chr4.4:37269680-37269699 | MS.gene23338:intron | 50.0% |
| !!! | GGCTGTTGGTTTTCACTTGC+TGG | + | chr4.4:37274164-37274183 | MS.gene23338:CDS | 50.0% |
| ATGAATGTTGGGGAGTCCGG+GGG | - | chr4.4:37273894-37273913 | None:intergenic | 55.0% | |
| ATTTGCTCATGCAGGCTGGG+CGG | + | chr4.4:37273966-37273985 | MS.gene23338:intron | 55.0% | |
| CACCCGAGAAACTCATAGGG+TGG | - | chr4.4:37271536-37271555 | None:intergenic | 55.0% | |
| CATGAATGTTGGGGAGTCCG+GGG | - | chr4.4:37273895-37273914 | None:intergenic | 55.0% | |
| CGGAAACTGTGCGGGGAAAT+GGG | + | chr4.4:37274513-37274532 | MS.gene23338:CDS | 55.0% | |
| CTGGTCACACCTGCAACAGT+CGG | + | chr4.4:37272923-37272942 | MS.gene23338:CDS | 55.0% | |
| GAAACTGTGCGGGGAAATGG+GGG | + | chr4.4:37274515-37274534 | MS.gene23338:CDS | 55.0% | |
| GAAGGTGGGAGGAAACGAAG+AGG | - | chr4.4:37268927-37268946 | None:intergenic | 55.0% | |
| GATTGGGCAGTTTGGGAGAG+AGG | - | chr4.4:37272345-37272364 | None:intergenic | 55.0% | |
| GCAGCAGCCAAAGCCTTCAA+GGG | - | chr4.4:37271334-37271353 | None:intergenic | 55.0% | |
| GCTGGATAGGATCTGCATCG+AGG | - | chr4.4:37274129-37274148 | None:intergenic | 55.0% | |
| GGAAACTGTGCGGGGAAATG+GGG | + | chr4.4:37274514-37274533 | MS.gene23338:CDS | 55.0% | |
| GGGCACCCGAGAAACTCATA+GGG | - | chr4.4:37271539-37271558 | None:intergenic | 55.0% | |
| TCCTCCCACCTTCCCTTCTA+AGG | + | chr4.4:37268934-37268953 | MS.gene23338:CDS | 55.0% | |
| TCCTTAGAAGGGAAGGTGGG+AGG | - | chr4.4:37268938-37268957 | None:intergenic | 55.0% | |
| TCGGAAACTGTGCGGGGAAA+TGG | + | chr4.4:37274512-37274531 | MS.gene23338:CDS | 55.0% | |
| TTAGGCGCAACAACGCTAGC+AGG | + | chr4.4:37270251-37270270 | MS.gene23338:CDS | 55.0% | |
| TTGGGGACCCTTGAAGGCTT+TGG | + | chr4.4:37271324-37271343 | MS.gene23338:CDS | 55.0% | |
| ! | AGGGCACCCGAGAAACTCAT+AGG | - | chr4.4:37271540-37271559 | None:intergenic | 55.0% |
| ! | GGAGGAAACGAAGAGGTACG+TGG | - | chr4.4:37268920-37268939 | None:intergenic | 55.0% |
| ! | TGACCTTGGTGGCACTTCCA+TGG | + | chr4.4:37269831-37269850 | MS.gene23338:intron | 55.0% |
| ! | TTTTGCTCTCGTTGCTCCCC+CGG | + | chr4.4:37273875-37273894 | MS.gene23338:intron | 55.0% |
| !! | GATCAAGTGTGGTGCCACTG+GGG | + | chr4.4:37274580-37274599 | MS.gene23338:CDS | 55.0% |
| !! | GTGATCAAGTGTGGTGCCAC+TGG | + | chr4.4:37274578-37274597 | MS.gene23338:CDS | 55.0% |
| !!! | GCTCCCTATGTTTTGGGGAC+TGG | + | chr4.4:37269679-37269698 | MS.gene23338:intron | 55.0% |
| CTCGCGTGCTCTGTGCAGTT+TGG | - | chr4.4:37271643-37271662 | None:intergenic | 60.0% | |
| GGCAGCAGCCAAAGCCTTCA+AGG | - | chr4.4:37271335-37271354 | None:intergenic | 60.0% | |
| TGCGGGGAAATGGGGGATGT+GGG | + | chr4.4:37274522-37274541 | MS.gene23338:CDS | 60.0% | |
| TTTGCTCATGCAGGCTGGGC+GGG | + | chr4.4:37273967-37273986 | MS.gene23338:intron | 60.0% | |
| ! | GACAGGCTCGGTCGCTTCTA+AGG | + | chr4.4:37272653-37272672 | MS.gene23338:intron | 60.0% |
| ! | TGGGGCTGCATGGGCTACAT+TGG | + | chr4.4:37271414-37271433 | MS.gene23338:CDS | 60.0% |
| !! | GCTCCATGGAAGTGCCACCA+AGG | - | chr4.4:37269837-37269856 | None:intergenic | 60.0% |
| ACCTGCAACAGTCGGCCTGG+AGG | + | chr4.4:37272931-37272950 | MS.gene23338:CDS | 65.0% | |
| ATGGGATCGCTGGGGCTGCA+TGG | + | chr4.4:37271404-37271423 | MS.gene23338:CDS | 65.0% | |
| CACACCTGCAACAGTCGGCC+TGG | + | chr4.4:37272928-37272947 | MS.gene23338:CDS | 65.0% | |
| CCTGCAACAGTCGGCCTGGA+GGG | + | chr4.4:37272932-37272951 | MS.gene23338:CDS | 65.0% | |
| CGGCCTGGAGGGAACATTGC+TGG | + | chr4.4:37272943-37272962 | MS.gene23338:CDS | 65.0% | |
| GTGCGGGGAAATGGGGGATG+TGG | + | chr4.4:37274521-37274540 | MS.gene23338:CDS | 65.0% | |
| TGGGATCGCTGGGGCTGCAT+GGG | + | chr4.4:37271405-37271424 | MS.gene23338:CDS | 65.0% | |
| ! | GAAGCGACTGTTCCGGCTCG+AGG | - | chr4.4:37269003-37269022 | None:intergenic | 65.0% |
| CCCTCCAGGCCGACTGTTGC+AGG | - | chr4.4:37272935-37272954 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37268855 | 37274618 | 37268855 | ID=MS.gene23338 |
| chr4.4 | mRNA | 37268855 | 37274618 | 37268855 | ID=MS.gene23338.t1;Parent=MS.gene23338 |
| chr4.4 | exon | 37268855 | 37269281 | 37268855 | ID=MS.gene23338.t1.exon1;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37268855 | 37269281 | 37268855 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37269362 | 37269456 | 37269362 | ID=MS.gene23338.t1.exon2;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37269362 | 37269456 | 37269362 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37270164 | 37270272 | 37270164 | ID=MS.gene23338.t1.exon3;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37270164 | 37270272 | 37270164 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37270399 | 37270454 | 37270399 | ID=MS.gene23338.t1.exon4;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37270399 | 37270454 | 37270399 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37270747 | 37270802 | 37270747 | ID=MS.gene23338.t1.exon5;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37270747 | 37270802 | 37270747 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37271306 | 37271444 | 37271306 | ID=MS.gene23338.t1.exon6;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37271306 | 37271444 | 37271306 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37271898 | 37272035 | 37271898 | ID=MS.gene23338.t1.exon7;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37271898 | 37272035 | 37271898 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37272121 | 37272189 | 37272121 | ID=MS.gene23338.t1.exon8;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37272121 | 37272189 | 37272121 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37272300 | 37272410 | 37272300 | ID=MS.gene23338.t1.exon9;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37272300 | 37272410 | 37272300 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37272658 | 37272786 | 37272658 | ID=MS.gene23338.t1.exon10;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37272658 | 37272786 | 37272658 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37272887 | 37272964 | 37272887 | ID=MS.gene23338.t1.exon11;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37272887 | 37272964 | 37272887 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37273980 | 37274051 | 37273980 | ID=MS.gene23338.t1.exon12;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37273980 | 37274051 | 37273980 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37274137 | 37274196 | 37274137 | ID=MS.gene23338.t1.exon13;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37274137 | 37274196 | 37274137 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| chr4.4 | exon | 37274499 | 37274618 | 37274499 | ID=MS.gene23338.t1.exon14;Parent=MS.gene23338.t1 |
| chr4.4 | CDS | 37274499 | 37274618 | 37274499 | ID=cds.MS.gene23338.t1;Parent=MS.gene23338.t1 |
| Gene Sequence |
| Protein sequence |
