Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28218.t1 | XP_003598987.1 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 4.20E-207 | 730.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28218.t1 | Q55E45 | 33.9 | 313 | 175 | 8 | 31 | 335 | 15 | 303 | 3.7e-42 | 173.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28218.t1 | G7IZA2 | 98.9 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 3.1e-207 | 730.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049756 | MS.gene28218 | 0.805415 | 1.35E-49 | -1.69E-46 |
| MS.gene04987 | MS.gene28218 | 0.811246 | 7.70E-51 | -1.69E-46 |
| MS.gene04988 | MS.gene28218 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene050277 | MS.gene28218 | 0.849648 | 2.83E-60 | -1.69E-46 |
| MS.gene050303 | MS.gene28218 | 0.846386 | 2.24E-59 | -1.69E-46 |
| MS.gene050719 | MS.gene28218 | 0.815078 | 1.11E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene28218 | 0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene051243 | MS.gene28218 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene05134 | MS.gene28218 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene28218 | 0.818144 | 2.28E-52 | -1.69E-46 |
| MS.gene052286 | MS.gene28218 | 0.845871 | 3.10E-59 | -1.69E-46 |
| MS.gene052302 | MS.gene28218 | 0.815659 | 8.25E-52 | -1.69E-46 |
| MS.gene052309 | MS.gene28218 | -0.80719 | 5.70E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene28218 | 0.824766 | 6.76E-54 | -1.69E-46 |
| MS.gene052947 | MS.gene28218 | 0.819403 | 1.18E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene28218 | 0.82184 | 3.26E-53 | -1.69E-46 |
| MS.gene053188 | MS.gene28218 | 0.806156 | 9.43E-50 | -1.69E-46 |
| MS.gene053216 | MS.gene28218 | 0.81283 | 3.48E-51 | -1.69E-46 |
| MS.gene054657 | MS.gene28218 | 0.821607 | 3.69E-53 | -1.69E-46 |
| MS.gene055808 | MS.gene28218 | 0.837704 | 4.44E-57 | -1.69E-46 |
| MS.gene056091 | MS.gene28218 | 0.825038 | 5.83E-54 | -1.69E-46 |
| MS.gene056506 | MS.gene28218 | 0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene056580 | MS.gene28218 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene056631 | MS.gene28218 | 0.838676 | 2.50E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene28218 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene28218 | 0.839921 | 1.19E-57 | -1.69E-46 |
| MS.gene057079 | MS.gene28218 | 0.8271 | 1.88E-54 | -1.69E-46 |
| MS.gene057140 | MS.gene28218 | 0.824069 | 9.85E-54 | -1.69E-46 |
| MS.gene057234 | MS.gene28218 | 0.811431 | 7.03E-51 | -1.69E-46 |
| MS.gene057555 | MS.gene28218 | 0.811835 | 5.74E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene28218 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene28218 | 0.831503 | 1.61E-55 | -1.69E-46 |
| MS.gene058055 | MS.gene28218 | 0.805071 | 1.59E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene28218 | 0.813596 | 2.36E-51 | -1.69E-46 |
| MS.gene058238 | MS.gene28218 | 0.822077 | 2.87E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene28218 | 0.822632 | 2.14E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene28218 | 0.814426 | 1.55E-51 | -1.69E-46 |
| MS.gene05954 | MS.gene28218 | 0.840737 | 7.26E-58 | -1.69E-46 |
| MS.gene059569 | MS.gene28218 | 0.818318 | 2.09E-52 | -1.69E-46 |
| MS.gene05979 | MS.gene28218 | 0.809436 | 1.89E-50 | -1.69E-46 |
| MS.gene059830 | MS.gene28218 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene28218 | 0.825117 | 5.58E-54 | -1.69E-46 |
| MS.gene060297 | MS.gene28218 | 0.818617 | 1.78E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene28218 | 0.829061 | 6.36E-55 | -1.69E-46 |
| MS.gene060572 | MS.gene28218 | 0.828232 | 1.01E-54 | -1.69E-46 |
| MS.gene060586 | MS.gene28218 | 0.83337 | 5.54E-56 | -1.69E-46 |
| MS.gene060907 | MS.gene28218 | 0.825597 | 4.30E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28218.t1 | MTR_3g025800 | 98.883 | 358 | 4 | 0 | 1 | 358 | 1 | 358 | 0.0 | 728 |
| MS.gene28218.t1 | MTR_1g097890 | 31.902 | 326 | 171 | 5 | 12 | 336 | 34 | 309 | 6.32e-45 | 157 |
| MS.gene28218.t1 | MTR_8g098240 | 32.298 | 322 | 175 | 6 | 15 | 332 | 306 | 588 | 1.18e-42 | 156 |
| MS.gene28218.t1 | MTR_8g092080 | 31.715 | 309 | 161 | 5 | 29 | 337 | 53 | 311 | 1.53e-41 | 148 |
| MS.gene28218.t1 | MTR_5g073040 | 29.674 | 337 | 196 | 7 | 9 | 338 | 22 | 324 | 1.08e-34 | 130 |
| MS.gene28218.t1 | MTR_6g034515 | 33.025 | 324 | 157 | 10 | 42 | 356 | 81 | 353 | 1.22e-33 | 128 |
| MS.gene28218.t1 | MTR_1g095780 | 28.571 | 315 | 171 | 8 | 24 | 333 | 521 | 786 | 2.74e-33 | 131 |
| MS.gene28218.t1 | MTR_3g098460 | 27.844 | 334 | 198 | 9 | 6 | 332 | 184 | 481 | 7.26e-30 | 119 |
| MS.gene28218.t1 | MTR_2g436930 | 28.704 | 324 | 181 | 7 | 31 | 326 | 18 | 319 | 1.11e-29 | 116 |
| MS.gene28218.t1 | MTR_2g436930 | 29.082 | 196 | 124 | 6 | 128 | 321 | 17 | 199 | 2.14e-13 | 70.9 |
| MS.gene28218.t1 | MTR_8g066975 | 30.063 | 316 | 186 | 11 | 24 | 329 | 4 | 294 | 6.07e-28 | 111 |
| MS.gene28218.t1 | MTR_8g066975 | 27.731 | 238 | 127 | 7 | 3 | 227 | 90 | 295 | 2.06e-14 | 73.2 |
| MS.gene28218.t1 | MTR_8g066975 | 27.103 | 214 | 122 | 6 | 128 | 331 | 10 | 199 | 7.28e-11 | 62.8 |
| MS.gene28218.t1 | MTR_4g119770 | 28.221 | 326 | 180 | 10 | 31 | 325 | 17 | 319 | 7.11e-28 | 111 |
| MS.gene28218.t1 | MTR_4g119770 | 29.744 | 195 | 126 | 3 | 128 | 321 | 16 | 200 | 1.19e-14 | 74.3 |
| MS.gene28218.t1 | MTR_4g119770 | 23.423 | 222 | 140 | 5 | 18 | 226 | 119 | 323 | 9.44e-11 | 62.8 |
| MS.gene28218.t1 | MTR_7g109135 | 27.044 | 318 | 191 | 9 | 31 | 337 | 25 | 312 | 1.38e-27 | 110 |
| MS.gene28218.t1 | MTR_7g109135 | 24.510 | 204 | 128 | 4 | 43 | 243 | 138 | 318 | 2.31e-12 | 67.4 |
| MS.gene28218.t1 | MTR_8g096050 | 27.190 | 331 | 204 | 8 | 6 | 332 | 206 | 503 | 5.77e-27 | 111 |
| MS.gene28218.t1 | MTR_5g030530 | 28.972 | 321 | 183 | 12 | 24 | 329 | 4 | 294 | 1.78e-26 | 107 |
| MS.gene28218.t1 | MTR_5g030530 | 27.602 | 221 | 122 | 6 | 20 | 227 | 100 | 295 | 6.13e-12 | 65.9 |
| MS.gene28218.t1 | MTR_8g076760 | 26.712 | 292 | 186 | 7 | 42 | 325 | 28 | 299 | 5.96e-25 | 103 |
| MS.gene28218.t1 | MTR_8g076760 | 31.250 | 192 | 103 | 5 | 142 | 330 | 30 | 195 | 4.27e-15 | 75.5 |
| MS.gene28218.t1 | MTR_7g064980 | 26.562 | 320 | 187 | 11 | 27 | 329 | 24 | 312 | 7.22e-25 | 103 |
| MS.gene28218.t1 | MTR_7g064980 | 23.645 | 203 | 135 | 2 | 24 | 226 | 130 | 312 | 1.71e-13 | 70.9 |
| MS.gene28218.t1 | MTR_7g064980 | 23.629 | 237 | 159 | 4 | 104 | 337 | 4 | 221 | 3.40e-12 | 67.0 |
| MS.gene28218.t1 | MTR_5g009500 | 24.855 | 346 | 213 | 8 | 5 | 329 | 17 | 336 | 3.98e-24 | 101 |
| MS.gene28218.t1 | MTR_5g009500 | 24.651 | 215 | 139 | 4 | 126 | 338 | 38 | 231 | 3.77e-11 | 63.9 |
| MS.gene28218.t1 | MTR_8g027975 | 23.582 | 335 | 197 | 8 | 24 | 329 | 47 | 351 | 8.87e-24 | 100 |
| MS.gene28218.t1 | MTR_8g027975 | 25.112 | 223 | 144 | 4 | 118 | 338 | 43 | 244 | 1.29e-11 | 65.5 |
| MS.gene28218.t1 | MTR_8g027975 | 35.556 | 90 | 57 | 1 | 237 | 325 | 38 | 127 | 9.93e-11 | 62.8 |
| MS.gene28218.t1 | MTR_7g084400 | 25.938 | 320 | 190 | 9 | 21 | 332 | 206 | 486 | 3.25e-23 | 100 |
| MS.gene28218.t1 | MTR_7g109135 | 25.472 | 318 | 189 | 9 | 31 | 337 | 25 | 305 | 7.90e-23 | 97.4 |
| MS.gene28218.t1 | MTR_1g087840 | 27.000 | 300 | 172 | 10 | 44 | 329 | 35 | 301 | 1.57e-22 | 96.7 |
| MS.gene28218.t1 | MTR_4g114320 | 25.902 | 305 | 186 | 7 | 25 | 325 | 120 | 388 | 4.10e-22 | 96.7 |
| MS.gene28218.t1 | MTR_4g114320 | 25.909 | 220 | 124 | 6 | 116 | 333 | 117 | 299 | 3.99e-11 | 64.3 |
| MS.gene28218.t1 | MTR_4g057850 | 27.027 | 296 | 184 | 7 | 29 | 319 | 23 | 291 | 1.33e-21 | 94.4 |
| MS.gene28218.t1 | MTR_3g107510 | 24.359 | 312 | 188 | 7 | 26 | 329 | 120 | 391 | 1.66e-21 | 95.1 |
| MS.gene28218.t1 | MTR_3g107510 | 27.679 | 224 | 132 | 7 | 3 | 225 | 196 | 390 | 2.09e-13 | 71.2 |
| MS.gene28218.t1 | MTR_3g107510 | 28.194 | 227 | 123 | 7 | 109 | 333 | 109 | 297 | 2.87e-13 | 70.9 |
| MS.gene28218.t1 | MTR_3g104600 | 25.846 | 325 | 211 | 8 | 15 | 328 | 21 | 326 | 2.12e-21 | 94.0 |
| MS.gene28218.t1 | MTR_1g012030 | 25.000 | 316 | 181 | 8 | 25 | 328 | 136 | 407 | 3.74e-21 | 94.4 |
| MS.gene28218.t1 | MTR_1g012030 | 33.108 | 148 | 87 | 4 | 188 | 333 | 177 | 314 | 3.31e-13 | 70.9 |
| MS.gene28218.t1 | MTR_1g012030 | 26.339 | 224 | 135 | 7 | 3 | 225 | 213 | 407 | 2.26e-12 | 68.2 |
| MS.gene28218.t1 | MTR_4g088545 | 24.104 | 307 | 208 | 5 | 25 | 326 | 9 | 295 | 1.18e-20 | 91.3 |
| MS.gene28218.t1 | MTR_4g088545 | 23.288 | 219 | 137 | 4 | 123 | 335 | 9 | 202 | 1.59e-12 | 67.8 |
| MS.gene28218.t1 | MTR_4g119770 | 28.464 | 267 | 148 | 9 | 31 | 277 | 17 | 260 | 1.45e-20 | 90.1 |
| MS.gene28218.t1 | MTR_4g119770 | 29.744 | 195 | 126 | 3 | 128 | 321 | 16 | 200 | 6.72e-15 | 74.3 |
| MS.gene28218.t1 | MTR_6g091800 | 24.242 | 330 | 219 | 8 | 20 | 342 | 10 | 315 | 1.63e-20 | 91.3 |
| MS.gene28218.t1 | MTR_5g055410 | 25.667 | 300 | 190 | 9 | 44 | 336 | 37 | 310 | 2.74e-20 | 90.9 |
| MS.gene28218.t1 | MTR_5g055410 | 25.405 | 185 | 118 | 4 | 43 | 224 | 134 | 301 | 3.23e-11 | 64.3 |
| MS.gene28218.t1 | MTR_4g012850 | 29.260 | 311 | 186 | 9 | 26 | 332 | 14 | 294 | 5.17e-19 | 86.7 |
| MS.gene28218.t1 | MTR_6g091800 | 22.609 | 345 | 230 | 7 | 20 | 342 | 10 | 339 | 1.28e-18 | 86.3 |
| MS.gene28218.t1 | MTR_2g032610 | 26.398 | 322 | 197 | 9 | 3 | 309 | 1 | 297 | 1.74e-18 | 85.5 |
| MS.gene28218.t1 | MTR_7g109135 | 25.856 | 263 | 156 | 8 | 84 | 337 | 2 | 234 | 2.39e-18 | 83.6 |
| MS.gene28218.t1 | MTR_7g109135 | 24.631 | 203 | 127 | 4 | 44 | 243 | 61 | 240 | 1.12e-12 | 67.4 |
| MS.gene28218.t1 | MTR_6g015860 | 24.837 | 306 | 180 | 10 | 42 | 329 | 31 | 304 | 6.66e-18 | 84.0 |
| MS.gene28218.t1 | MTR_2g436930 | 35.849 | 159 | 90 | 2 | 180 | 326 | 71 | 229 | 1.96e-17 | 80.9 |
| MS.gene28218.t1 | MTR_2g436930 | 23.874 | 222 | 139 | 5 | 18 | 226 | 28 | 232 | 8.46e-11 | 62.0 |
| MS.gene28218.t1 | MTR_6g091800 | 25.385 | 260 | 169 | 6 | 20 | 276 | 10 | 247 | 7.02e-17 | 80.1 |
| MS.gene28218.t1 | MTR_6g091800 | 28.571 | 161 | 91 | 4 | 190 | 337 | 62 | 211 | 9.23e-13 | 68.2 |
| MS.gene28218.t1 | MTR_6g091800 | 23.377 | 308 | 201 | 6 | 20 | 305 | 10 | 304 | 8.38e-17 | 80.5 |
| MS.gene28218.t1 | MTR_6g091800 | 25.385 | 260 | 169 | 6 | 20 | 276 | 10 | 247 | 9.65e-17 | 79.7 |
| MS.gene28218.t1 | MTR_6g091800 | 28.571 | 161 | 91 | 4 | 190 | 337 | 62 | 211 | 1.37e-12 | 67.4 |
| MS.gene28218.t1 | MTR_7g015870 | 27.027 | 296 | 146 | 14 | 42 | 309 | 39 | 292 | 1.61e-16 | 79.7 |
| MS.gene28218.t1 | MTR_7g015870 | 26.712 | 292 | 152 | 12 | 42 | 309 | 35 | 288 | 2.46e-16 | 79.3 |
| MS.gene28218.t1 | MTR_4g088545 | 25.097 | 259 | 165 | 6 | 25 | 276 | 9 | 245 | 6.83e-16 | 77.0 |
| MS.gene28218.t1 | MTR_4g088545 | 23.214 | 224 | 141 | 4 | 123 | 340 | 9 | 207 | 1.49e-12 | 67.4 |
| MS.gene28218.t1 | MTR_4g005330 | 25.641 | 312 | 192 | 9 | 26 | 325 | 64 | 347 | 8.85e-16 | 78.2 |
| MS.gene28218.t1 | MTR_4g018750 | 24.351 | 308 | 192 | 9 | 28 | 325 | 15 | 291 | 9.00e-16 | 77.4 |
| MS.gene28218.t1 | MTR_3g462140 | 22.571 | 319 | 213 | 7 | 20 | 331 | 7 | 298 | 1.57e-15 | 76.6 |
| MS.gene28218.t1 | MTR_1g088995 | 24.204 | 314 | 193 | 9 | 24 | 329 | 29 | 305 | 1.59e-15 | 76.6 |
| MS.gene28218.t1 | MTR_7g068340 | 21.799 | 289 | 186 | 6 | 44 | 329 | 103 | 354 | 2.84e-15 | 76.6 |
| MS.gene28218.t1 | MTR_5g081150 | 24.611 | 321 | 198 | 8 | 27 | 333 | 33 | 323 | 2.99e-15 | 76.3 |
| MS.gene28218.t1 | MTR_6g091800 | 23.273 | 275 | 180 | 5 | 20 | 276 | 10 | 271 | 5.31e-15 | 75.1 |
| MS.gene28218.t1 | MTR_4g088545 | 26.316 | 190 | 118 | 4 | 25 | 210 | 9 | 180 | 5.32e-15 | 73.9 |
| MS.gene28218.t1 | MTR_4g088545 | 23.288 | 219 | 137 | 4 | 123 | 335 | 9 | 202 | 5.62e-13 | 68.2 |
| MS.gene28218.t1 | MTR_6g091800 | 23.273 | 275 | 180 | 5 | 20 | 276 | 10 | 271 | 6.86e-15 | 74.7 |
| MS.gene28218.t1 | MTR_6g034145 | 24.101 | 278 | 184 | 6 | 71 | 342 | 5 | 261 | 1.34e-14 | 73.2 |
| MS.gene28218.t1 | MTR_6g034145 | 25.229 | 218 | 128 | 6 | 24 | 226 | 53 | 250 | 3.09e-11 | 63.5 |
| MS.gene28218.t1 | MTR_3g104500 | 27.638 | 199 | 123 | 4 | 28 | 225 | 141 | 319 | 1.42e-14 | 74.3 |
| MS.gene28218.t1 | MTR_7g066690 | 23.101 | 316 | 209 | 9 | 16 | 325 | 6 | 293 | 1.46e-14 | 73.9 |
| MS.gene28218.t1 | MTR_2g102010 | 27.431 | 288 | 171 | 9 | 24 | 305 | 13 | 268 | 1.61e-14 | 73.6 |
| MS.gene28218.t1 | MTR_3g100570 | 23.669 | 338 | 199 | 10 | 26 | 333 | 4 | 312 | 2.59e-14 | 73.2 |
| MS.gene28218.t1 | MTR_7g109135 | 25.373 | 201 | 118 | 6 | 142 | 337 | 40 | 213 | 6.54e-14 | 70.5 |
| MS.gene28218.t1 | MTR_7g109135 | 24.631 | 203 | 127 | 4 | 44 | 243 | 40 | 219 | 8.98e-13 | 67.4 |
| MS.gene28218.t1 | MTR_4g005330 | 25.081 | 307 | 190 | 9 | 31 | 325 | 3 | 281 | 1.25e-13 | 70.9 |
| MS.gene28218.t1 | MTR_4g018750 | 25.735 | 272 | 161 | 9 | 28 | 289 | 15 | 255 | 1.90e-13 | 70.5 |
| MS.gene28218.t1 | MTR_3g074490 | 21.474 | 312 | 201 | 10 | 31 | 328 | 119 | 400 | 9.97e-13 | 69.3 |
| MS.gene28218.t1 | MTR_8g090210 | 21.543 | 311 | 202 | 8 | 31 | 328 | 113 | 394 | 1.61e-12 | 68.6 |
| MS.gene28218.t1 | MTR_3g104810 | 22.663 | 353 | 237 | 7 | 4 | 334 | 8 | 346 | 2.28e-12 | 67.8 |
| MS.gene28218.t1 | MTR_8g019480 | 25.641 | 273 | 160 | 6 | 28 | 276 | 33 | 286 | 2.40e-12 | 67.8 |
| MS.gene28218.t1 | MTR_7g117030 | 21.802 | 344 | 213 | 10 | 27 | 334 | 15 | 338 | 2.50e-12 | 67.8 |
| MS.gene28218.t1 | MTR_6g092210 | 23.466 | 277 | 181 | 6 | 71 | 342 | 5 | 255 | 3.90e-12 | 66.2 |
| MS.gene28218.t1 | MTR_6g091910 | 25.463 | 216 | 131 | 6 | 20 | 225 | 10 | 205 | 5.05e-12 | 65.1 |
| MS.gene28218.t1 | MTR_1g090330 | 22.848 | 302 | 193 | 10 | 15 | 308 | 5 | 274 | 1.55e-11 | 64.7 |
| MS.gene28218.t1 | MTR_1g090330 | 30.114 | 176 | 88 | 7 | 142 | 310 | 30 | 177 | 3.78e-11 | 63.5 |
| MS.gene28218.t1 | MTR_4g016730 | 22.074 | 299 | 170 | 8 | 44 | 329 | 105 | 353 | 2.61e-11 | 64.7 |
| MS.gene28218.t1 | MTR_8g099910 | 24.116 | 311 | 182 | 12 | 11 | 308 | 52 | 321 | 2.80e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28218.t1 | AT1G74240 | 69.252 | 361 | 99 | 3 | 1 | 353 | 1 | 357 | 1.02e-169 | 477 |
| MS.gene28218.t1 | AT1G74240 | 71.565 | 313 | 85 | 2 | 41 | 353 | 1 | 309 | 2.56e-150 | 426 |
| MS.gene28218.t1 | AT4G39460 | 32.722 | 327 | 165 | 6 | 16 | 337 | 41 | 317 | 4.21e-47 | 162 |
| MS.gene28218.t1 | AT4G39460 | 32.722 | 327 | 165 | 6 | 16 | 337 | 41 | 317 | 4.21e-47 | 162 |
| MS.gene28218.t1 | AT4G39460 | 32.722 | 327 | 165 | 6 | 16 | 337 | 41 | 317 | 4.21e-47 | 162 |
| MS.gene28218.t1 | AT1G34065 | 32.278 | 316 | 162 | 6 | 21 | 334 | 73 | 338 | 3.47e-44 | 155 |
| MS.gene28218.t1 | AT1G34065 | 32.278 | 316 | 162 | 6 | 21 | 334 | 66 | 331 | 4.13e-44 | 155 |
| MS.gene28218.t1 | AT2G26360 | 29.870 | 308 | 170 | 6 | 24 | 329 | 111 | 374 | 1.90e-37 | 139 |
| MS.gene28218.t1 | AT4G11440 | 29.904 | 311 | 180 | 5 | 22 | 328 | 324 | 600 | 8.34e-36 | 137 |
| MS.gene28218.t1 | AT4G11440 | 29.904 | 311 | 180 | 5 | 22 | 328 | 324 | 600 | 8.34e-36 | 137 |
| MS.gene28218.t1 | AT1G07030 | 29.377 | 337 | 192 | 9 | 7 | 332 | 19 | 320 | 5.11e-32 | 123 |
| MS.gene28218.t1 | AT2G30160 | 28.986 | 345 | 198 | 9 | 4 | 333 | 11 | 323 | 4.12e-31 | 120 |
| MS.gene28218.t1 | AT5G46800 | 30.599 | 317 | 190 | 9 | 25 | 332 | 5 | 300 | 2.37e-30 | 117 |
| MS.gene28218.t1 | AT5G46800 | 30.599 | 317 | 190 | 9 | 25 | 332 | 5 | 300 | 2.37e-30 | 117 |
| MS.gene28218.t1 | AT5G46800 | 30.599 | 317 | 190 | 9 | 25 | 332 | 5 | 300 | 2.37e-30 | 117 |
| MS.gene28218.t1 | AT2G35800 | 27.097 | 310 | 175 | 7 | 24 | 329 | 541 | 803 | 2.45e-30 | 122 |
| MS.gene28218.t1 | AT1G25380 | 28.750 | 320 | 192 | 10 | 44 | 354 | 37 | 329 | 1.94e-27 | 111 |
| MS.gene28218.t1 | AT1G25380 | 25.789 | 190 | 110 | 5 | 43 | 224 | 136 | 302 | 8.67e-13 | 69.3 |
| MS.gene28218.t1 | AT1G25380 | 28.750 | 320 | 192 | 10 | 44 | 354 | 37 | 329 | 1.94e-27 | 111 |
| MS.gene28218.t1 | AT1G25380 | 25.789 | 190 | 110 | 5 | 43 | 224 | 136 | 302 | 8.67e-13 | 69.3 |
| MS.gene28218.t1 | AT3G53940 | 28.107 | 338 | 194 | 12 | 16 | 337 | 61 | 365 | 1.14e-26 | 109 |
| MS.gene28218.t1 | AT3G53940 | 26.829 | 246 | 139 | 7 | 107 | 337 | 48 | 267 | 3.07e-13 | 70.5 |
| MS.gene28218.t1 | AT5G42130 | 30.405 | 296 | 160 | 7 | 42 | 328 | 132 | 390 | 2.23e-26 | 108 |
| MS.gene28218.t1 | AT5G48970 | 27.217 | 327 | 185 | 9 | 31 | 326 | 25 | 329 | 2.71e-26 | 107 |
| MS.gene28218.t1 | AT5G48970 | 26.108 | 203 | 137 | 4 | 128 | 329 | 24 | 214 | 1.17e-11 | 65.5 |
| MS.gene28218.t1 | AT2G47490 | 28.947 | 304 | 182 | 9 | 44 | 340 | 33 | 309 | 3.72e-26 | 106 |
| MS.gene28218.t1 | AT3G21390 | 28.012 | 332 | 187 | 8 | 31 | 332 | 22 | 331 | 1.10e-25 | 105 |
| MS.gene28218.t1 | AT3G21390 | 29.293 | 198 | 119 | 6 | 128 | 321 | 21 | 201 | 1.53e-12 | 68.2 |
| MS.gene28218.t1 | AT3G21390 | 27.711 | 332 | 188 | 8 | 31 | 332 | 44 | 353 | 1.47e-25 | 105 |
| MS.gene28218.t1 | AT3G21390 | 30.151 | 199 | 116 | 7 | 128 | 321 | 43 | 223 | 1.72e-12 | 68.2 |
| MS.gene28218.t1 | AT4G32400 | 26.774 | 310 | 185 | 6 | 25 | 329 | 111 | 383 | 2.91e-23 | 100 |
| MS.gene28218.t1 | AT4G32400 | 25.676 | 222 | 125 | 6 | 112 | 331 | 104 | 287 | 4.57e-11 | 63.9 |
| MS.gene28218.t1 | AT2G37890 | 25.970 | 335 | 195 | 11 | 10 | 329 | 34 | 330 | 1.43e-22 | 97.4 |
| MS.gene28218.t1 | AT4G01100 | 22.941 | 340 | 193 | 9 | 24 | 329 | 38 | 342 | 2.29e-22 | 97.1 |
| MS.gene28218.t1 | AT4G01100 | 25.306 | 245 | 160 | 4 | 96 | 338 | 12 | 235 | 6.38e-13 | 69.3 |
| MS.gene28218.t1 | AT5G66380 | 25.962 | 312 | 196 | 8 | 25 | 325 | 7 | 294 | 9.67e-22 | 94.4 |
| MS.gene28218.t1 | AT4G26180 | 25.826 | 333 | 218 | 10 | 26 | 352 | 19 | 328 | 1.40e-21 | 94.4 |
| MS.gene28218.t1 | AT5G01340 | 26.689 | 296 | 186 | 7 | 29 | 319 | 18 | 287 | 1.43e-21 | 94.0 |
| MS.gene28218.t1 | AT4G01100 | 23.276 | 348 | 196 | 9 | 24 | 329 | 38 | 356 | 1.52e-21 | 94.7 |
| MS.gene28218.t1 | AT5G48970 | 26.786 | 280 | 163 | 8 | 67 | 326 | 1 | 258 | 6.20e-21 | 91.7 |
| MS.gene28218.t1 | AT2G33820 | 23.676 | 321 | 198 | 7 | 22 | 326 | 12 | 301 | 7.41e-21 | 92.0 |
| MS.gene28218.t1 | AT4G01100 | 23.125 | 320 | 177 | 9 | 44 | 329 | 8 | 292 | 2.27e-20 | 90.5 |
| MS.gene28218.t1 | AT4G01100 | 29.193 | 161 | 111 | 2 | 180 | 338 | 26 | 185 | 1.36e-12 | 68.2 |
| MS.gene28218.t1 | AT3G55640 | 24.348 | 345 | 217 | 10 | 7 | 337 | 17 | 331 | 2.53e-20 | 90.9 |
| MS.gene28218.t1 | AT3G55640 | 26.446 | 242 | 160 | 5 | 103 | 344 | 16 | 239 | 8.31e-15 | 75.1 |
| MS.gene28218.t1 | AT3G55640 | 24.348 | 345 | 217 | 10 | 7 | 337 | 17 | 331 | 2.53e-20 | 90.9 |
| MS.gene28218.t1 | AT3G55640 | 26.446 | 242 | 160 | 5 | 103 | 344 | 16 | 239 | 8.31e-15 | 75.1 |
| MS.gene28218.t1 | AT4G26180 | 26.923 | 286 | 182 | 9 | 26 | 305 | 19 | 283 | 2.92e-19 | 87.4 |
| MS.gene28218.t1 | AT4G26180 | 31.176 | 170 | 89 | 7 | 182 | 336 | 56 | 212 | 1.22e-12 | 68.2 |
| MS.gene28218.t1 | AT1G14560 | 26.531 | 294 | 188 | 6 | 44 | 328 | 43 | 317 | 3.16e-19 | 87.8 |
| MS.gene28218.t1 | AT1G14560 | 26.066 | 211 | 129 | 4 | 27 | 225 | 122 | 317 | 2.23e-13 | 70.9 |
| MS.gene28218.t1 | AT5G51050 | 25.478 | 314 | 185 | 11 | 28 | 332 | 223 | 496 | 7.35e-19 | 88.2 |
| MS.gene28218.t1 | AT5G07320 | 25.170 | 294 | 172 | 8 | 44 | 331 | 225 | 476 | 9.95e-19 | 87.8 |
| MS.gene28218.t1 | AT5G61810 | 22.727 | 330 | 210 | 7 | 6 | 331 | 44 | 332 | 1.30e-18 | 85.9 |
| MS.gene28218.t1 | AT2G33820 | 23.100 | 329 | 198 | 8 | 22 | 326 | 12 | 309 | 4.49e-18 | 84.3 |
| MS.gene28218.t1 | AT5G61810 | 23.052 | 308 | 193 | 6 | 28 | 331 | 208 | 475 | 4.63e-18 | 85.5 |
| MS.gene28218.t1 | AT1G14560 | 27.306 | 271 | 169 | 6 | 44 | 305 | 43 | 294 | 5.27e-18 | 84.0 |
| MS.gene28218.t1 | AT1G14560 | 26.596 | 188 | 111 | 4 | 27 | 202 | 122 | 294 | 1.78e-11 | 64.7 |
| MS.gene28218.t1 | AT3G54110 | 23.585 | 318 | 202 | 8 | 26 | 333 | 13 | 299 | 6.94e-18 | 83.6 |
| MS.gene28218.t1 | AT5G15640 | 25.862 | 290 | 159 | 9 | 42 | 309 | 42 | 297 | 1.09e-17 | 83.2 |
| MS.gene28218.t1 | AT5G15640 | 25.862 | 290 | 159 | 9 | 42 | 309 | 35 | 290 | 1.74e-17 | 82.4 |
| MS.gene28218.t1 | AT2G39970 | 25.974 | 308 | 196 | 9 | 41 | 327 | 21 | 317 | 7.76e-17 | 80.9 |
| MS.gene28218.t1 | AT1G72820 | 25.779 | 353 | 216 | 10 | 2 | 329 | 5 | 336 | 1.35e-16 | 80.5 |
| MS.gene28218.t1 | AT1G72820 | 25.779 | 353 | 216 | 10 | 2 | 329 | 5 | 336 | 1.35e-16 | 80.5 |
| MS.gene28218.t1 | AT4G03115 | 24.771 | 327 | 194 | 10 | 12 | 328 | 22 | 306 | 2.49e-16 | 79.3 |
| MS.gene28218.t1 | AT4G03115 | 24.771 | 327 | 194 | 10 | 12 | 328 | 54 | 338 | 3.08e-16 | 79.3 |
| MS.gene28218.t1 | AT3G20240 | 27.692 | 325 | 169 | 10 | 26 | 325 | 50 | 333 | 4.52e-16 | 79.0 |
| MS.gene28218.t1 | AT3G51870 | 22.591 | 301 | 189 | 7 | 34 | 329 | 97 | 358 | 9.33e-16 | 78.2 |
| MS.gene28218.t1 | AT1G79900 | 27.891 | 294 | 171 | 8 | 43 | 333 | 31 | 286 | 9.60e-16 | 77.4 |
| MS.gene28218.t1 | AT3G55640 | 26.033 | 242 | 161 | 4 | 103 | 344 | 16 | 239 | 2.13e-15 | 75.5 |
| MS.gene28218.t1 | AT3G55640 | 26.033 | 242 | 161 | 4 | 103 | 344 | 16 | 239 | 2.13e-15 | 75.5 |
| MS.gene28218.t1 | AT5G01500 | 21.649 | 291 | 184 | 7 | 44 | 329 | 135 | 386 | 2.68e-14 | 73.9 |
| MS.gene28218.t1 | AT5G58970 | 22.082 | 317 | 201 | 7 | 28 | 329 | 16 | 301 | 3.31e-14 | 72.8 |
| MS.gene28218.t1 | AT1G14560 | 25.943 | 212 | 130 | 4 | 27 | 226 | 24 | 220 | 6.40e-14 | 70.9 |
| MS.gene28218.t1 | AT1G14560 | 26.293 | 232 | 146 | 4 | 106 | 328 | 4 | 219 | 2.39e-13 | 69.3 |
| MS.gene28218.t1 | AT1G14140 | 23.024 | 291 | 187 | 7 | 27 | 308 | 15 | 277 | 8.89e-14 | 71.6 |
| MS.gene28218.t1 | AT3G53940 | 26.829 | 246 | 139 | 7 | 107 | 337 | 48 | 267 | 1.06e-13 | 71.2 |
| MS.gene28218.t1 | AT3G53940 | 27.132 | 258 | 144 | 10 | 16 | 261 | 61 | 286 | 5.61e-12 | 66.2 |
| MS.gene28218.t1 | AT5G64970 | 23.052 | 308 | 199 | 8 | 34 | 328 | 137 | 419 | 6.36e-13 | 70.1 |
| MS.gene28218.t1 | AT5G64970 | 22.801 | 307 | 199 | 8 | 35 | 328 | 14 | 295 | 8.20e-13 | 68.9 |
| MS.gene28218.t1 | AT2G33820 | 24.272 | 206 | 138 | 5 | 22 | 225 | 12 | 201 | 8.21e-13 | 68.2 |
| MS.gene28218.t1 | AT4G03115 | 23.963 | 217 | 136 | 4 | 14 | 226 | 45 | 236 | 1.18e-12 | 67.4 |
| MS.gene28218.t1 | AT4G03115 | 24.904 | 261 | 153 | 8 | 74 | 328 | 12 | 235 | 7.47e-11 | 62.0 |
| MS.gene28218.t1 | AT5G26200 | 25.312 | 320 | 202 | 11 | 26 | 329 | 37 | 335 | 1.59e-12 | 68.2 |
| MS.gene28218.t1 | AT5G56450 | 26.087 | 207 | 127 | 7 | 28 | 231 | 145 | 328 | 2.01e-12 | 67.8 |
| MS.gene28218.t1 | AT4G03115 | 23.963 | 217 | 136 | 4 | 14 | 226 | 53 | 244 | 2.03e-12 | 67.0 |
| MS.gene28218.t1 | AT4G03115 | 24.904 | 261 | 153 | 8 | 74 | 328 | 20 | 243 | 9.68e-11 | 62.0 |
| MS.gene28218.t1 | AT5G58970 | 25.000 | 220 | 130 | 6 | 126 | 330 | 16 | 215 | 4.15e-11 | 63.2 |
| MS.gene28218.t1 | AT2G22500 | 22.823 | 333 | 202 | 9 | 28 | 333 | 6 | 310 | 7.02e-11 | 63.2 |
| MS.gene28218.t1 | AT5G09470 | 25.194 | 258 | 163 | 6 | 74 | 328 | 99 | 329 | 7.29e-11 | 63.2 |
Find 100 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTCAGCGCTTACCTTTA+TGG | 0.074952 | 3.3:-17547216 | MS.gene28218:CDS |
| GGAGCTGTTGCGGGTGCTTT+TGG | 0.179774 | 3.3:-17551001 | MS.gene28218:CDS |
| CCATCTGCAATATGCCTTTC+TGG | 0.185244 | 3.3:+17550757 | None:intergenic |
| TTGAAAGATGCTACAGAGTA+TGG | 0.231414 | 3.3:-17547896 | MS.gene28218:CDS |
| TCTATTGTATTTAGGTATAA+TGG | 0.246393 | 3.3:-17547329 | MS.gene28218:intron |
| GCGACTGGTGCAACGTATTT+TGG | 0.249617 | 3.3:-17550422 | MS.gene28218:CDS |
| CAAAACTAGGCTGCAAGTTC+AGG | 0.252977 | 3.3:-17547664 | MS.gene28218:CDS |
| GAAATATATGATTATTATAA+AGG | 0.257154 | 3.3:-17549755 | MS.gene28218:CDS |
| ATGCAGAACACAGGGTTTAA+AGG | 0.259624 | 3.3:-17549708 | MS.gene28218:CDS |
| GGTGTAGTACCTGGTGTTAC+TGG | 0.266882 | 3.3:-17550452 | MS.gene28218:CDS |
| GAATTGTTAACATGCCAATT+TGG | 0.267859 | 3.3:+17547851 | None:intergenic |
| AAGGCGTTAAGGGGATGTTT+AGG | 0.289836 | 3.3:-17547271 | MS.gene28218:CDS |
| CATTGGGCACATTTCATTGC+TGG | 0.294429 | 3.3:-17550344 | MS.gene28218:CDS |
| TGGATGCAATTTACAACATA+TGG | 0.296124 | 3.3:-17547301 | MS.gene28218:CDS |
| AGGAATGTACCACGCAATTC+TGG | 0.302077 | 3.3:+17547238 | None:intergenic |
| AGGCGTTAAGGGGATGTTTA+GGG | 0.324139 | 3.3:-17547270 | MS.gene28218:CDS |
| TTTGTTTGGGGAGCTGTTGC+GGG | 0.326441 | 3.3:-17551010 | MS.gene28218:CDS |
| CAAAGTCAAGCCATTCTAAA+TGG | 0.327091 | 3.3:-17550935 | MS.gene28218:CDS |
| AGTATGGAGGGAGTTTGTTT+GGG | 0.330860 | 3.3:-17551023 | MS.gene28218:CDS |
| GATGGATATCTAATCCAAAT+TGG | 0.334157 | 3.3:-17547865 | MS.gene28218:CDS |
| AAGTATGGAGGGAGTTTGTT+TGG | 0.339019 | 3.3:-17551024 | MS.gene28218:CDS |
| GCAAGGGATGTACCATTTGC+TGG | 0.345283 | 3.3:-17549090 | MS.gene28218:CDS |
| GTTTGGAGCTTGTGGTTTAC+TGG | 0.345920 | 3.3:+17553901 | None:intergenic |
| AGTAGAAAAGAAGAAATCTT+TGG | 0.370427 | 3.3:-17547120 | MS.gene28218:CDS |
| GAGAAATTCCACAGCCATAA+AGG | 0.372649 | 3.3:+17547202 | None:intergenic |
| AGCTTGTGGTTTACTGGAAA+TGG | 0.376015 | 3.3:+17553907 | None:intergenic |
| CATGTTAACAATTCCTTTGA+GGG | 0.376064 | 3.3:-17547842 | MS.gene28218:CDS |
| TGCAGAACACAGGGTTTAAA+GGG | 0.376283 | 3.3:-17549707 | MS.gene28218:CDS |
| TAACAATTCCTTTGAGGGAT+TGG | 0.377036 | 3.3:-17547837 | MS.gene28218:CDS |
| ATGGGATAAGGAAGGCGTTA+AGG | 0.383119 | 3.3:-17547282 | MS.gene28218:CDS |
| AGGATTCACATCCTAGCCTT+GGG | 0.397607 | 3.3:-17550370 | MS.gene28218:CDS |
| CGGTCTGTCTGGAAGGTTGA+TGG | 0.398866 | 3.3:-17550732 | MS.gene28218:CDS |
| TGTACCATTTGCTGGCTTGA+TGG | 0.403410 | 3.3:-17549082 | MS.gene28218:intron |
| TGGGATAAGGAAGGCGTTAA+GGG | 0.412217 | 3.3:-17547281 | MS.gene28218:CDS |
| TGCAGATGGTGCGGTCTGTC+TGG | 0.418211 | 3.3:-17550743 | MS.gene28218:CDS |
| AGCGCTTACCTTTATGGCTG+TGG | 0.421227 | 3.3:-17547210 | MS.gene28218:CDS |
| GGTTTAAAGGGTTTATATGC+AGG | 0.422881 | 3.3:-17549695 | MS.gene28218:CDS |
| TACCTTAACACCATTTAGAA+TGG | 0.431227 | 3.3:+17550925 | None:intergenic |
| TGCATATCTCACGACACCTT+TGG | 0.432676 | 3.3:-17547694 | MS.gene28218:CDS |
| GTTTGTTTGGGGAGCTGTTG+CGG | 0.436326 | 3.3:-17551011 | MS.gene28218:CDS |
| AGCCATTCTAAATGGTGTTA+AGG | 0.436825 | 3.3:-17550927 | MS.gene28218:intron |
| AAATATATGATTATTATAAA+GGG | 0.444285 | 3.3:-17549754 | MS.gene28218:CDS |
| GGAATGTACCACGCAATTCT+GGG | 0.449859 | 3.3:+17547239 | None:intergenic |
| CATTTCATTGCTGGAGCTGT+TGG | 0.450661 | 3.3:-17550335 | MS.gene28218:intron |
| CGCTGCTTTATCACTTCGCA+TGG | 0.451002 | 3.3:+17549854 | None:intergenic |
| TGGTCGTGAGAAACGTTGTT+TGG | 0.455300 | 3.3:+17553884 | None:intergenic |
| GCATGTTAACAATTCCTTTG+AGG | 0.458098 | 3.3:-17547843 | MS.gene28218:CDS |
| AAGCAGCGCATGCAAGTTCA+AGG | 0.461159 | 3.3:-17549839 | MS.gene28218:CDS |
| CTGCAGATATTTGTCTACAT+TGG | 0.465002 | 3.3:-17549112 | MS.gene28218:intron |
| CAGAGTATGGGAAGAAAAGA+TGG | 0.466982 | 3.3:-17547883 | MS.gene28218:CDS |
| AACATTGATCGAACCACCAT+TGG | 0.469379 | 3.3:+17547154 | None:intergenic |
| GAGGATTCACATCCTAGCCT+TGG | 0.477163 | 3.3:-17550371 | MS.gene28218:CDS |
| CTTTGGATGTCGTCAAAACT+AGG | 0.477244 | 3.3:-17547677 | MS.gene28218:CDS |
| TGGAAGGTTGATGGATTAAG+AGG | 0.483974 | 3.3:-17550723 | MS.gene28218:intron |
| GGATGCAATTTACAACATAT+GGG | 0.498562 | 3.3:-17547300 | MS.gene28218:CDS |
| TGCATATTGAGCTGCCTGCA+TGG | 0.498693 | 3.3:+17549726 | None:intergenic |
| CTTCATTGCAGTAGAACTCC+AGG | 0.501088 | 3.3:+17549805 | None:intergenic |
| AAAACTAGGCTGCAAGTTCA+GGG | 0.510587 | 3.3:-17547663 | MS.gene28218:CDS |
| TAATCATATATTTCTGCACC+AGG | 0.515860 | 3.3:+17549764 | None:intergenic |
| AATACCATCAAGCCAGCAAA+TGG | 0.515997 | 3.3:+17549078 | None:intergenic |
| AATTTACAACATATGGGATA+AGG | 0.517976 | 3.3:-17547294 | MS.gene28218:CDS |
| TGGGGAAGGAATGATGCATC+CGG | 0.530320 | 3.3:-17550981 | MS.gene28218:CDS |
| AGAAAAGAAGAAATCTTTGG+AGG | 0.540442 | 3.3:-17547117 | MS.gene28218:CDS |
| GAAACGTTGTTTGGAGCTTG+TGG | 0.543503 | 3.3:+17553893 | None:intergenic |
| ATAAAGGTAAGCGCTGAAGC+AGG | 0.544300 | 3.3:+17547218 | None:intergenic |
| ATTATGATATTGAAGTATGG+AGG | 0.546460 | 3.3:-17551036 | MS.gene28218:intron |
| GTTTAAAGGGTTTATATGCA+GGG | 0.548432 | 3.3:-17549694 | MS.gene28218:intron |
| TCCTAAAACCAATCCCTCAA+AGG | 0.551845 | 3.3:+17547829 | None:intergenic |
| GATATTTGTCTACATTGGCA+AGG | 0.552235 | 3.3:-17549107 | MS.gene28218:CDS |
| ATTTAGGTATAATGGTTGGT+TGG | 0.553150 | 3.3:-17547321 | MS.gene28218:intron |
| AGTTCTACTGCAATGAAGAA+TGG | 0.554759 | 3.3:-17549800 | MS.gene28218:CDS |
| GTTACTGGCTCTCTTGCGAC+TGG | 0.554875 | 3.3:-17550437 | MS.gene28218:CDS |
| ACATTGATCGAACCACCATT+GGG | 0.560504 | 3.3:+17547155 | None:intergenic |
| AAAGAAGAAATCTTTGGAGG+AGG | 0.570380 | 3.3:-17547114 | MS.gene28218:CDS |
| TTGTATTTAGGTATAATGGT+TGG | 0.571751 | 3.3:-17547325 | MS.gene28218:intron |
| TTCAAGGCACAATTACATCC+TGG | 0.574829 | 3.3:-17549823 | MS.gene28218:CDS |
| CAGCTCAATATGCAGAACAC+AGG | 0.577068 | 3.3:-17549717 | MS.gene28218:CDS |
| ATTTGTCTGTAGAACCAGAA+AGG | 0.578447 | 3.3:-17550771 | MS.gene28218:intron |
| TATAAAGGGATGTTCCATGC+AGG | 0.579831 | 3.3:-17549740 | MS.gene28218:CDS |
| GTATGGAGGGAGTTTGTTTG+GGG | 0.582847 | 3.3:-17551022 | MS.gene28218:CDS |
| CAGCAATGAAATGTGCCCAA+TGG | 0.586726 | 3.3:+17550345 | None:intergenic |
| TGAAAGATGCTACAGAGTAT+GGG | 0.586810 | 3.3:-17547895 | MS.gene28218:CDS |
| GGATTCACATCCTAGCCTTG+GGG | 0.588014 | 3.3:-17550369 | MS.gene28218:CDS |
| ATATTTGTCTACATTGGCAA+GGG | 0.591945 | 3.3:-17549106 | MS.gene28218:CDS |
| CCAGAAAGGCATATTGCAGA+TGG | 0.592867 | 3.3:-17550757 | MS.gene28218:CDS |
| GATGGTGCGGTCTGTCTGGA+AGG | 0.593657 | 3.3:-17550739 | MS.gene28218:CDS |
| GGGATAAGGAAGGCGTTAAG+GGG | 0.596351 | 3.3:-17547280 | MS.gene28218:CDS |
| GCAAGAGAGCCAGTAACACC+AGG | 0.599638 | 3.3:+17550443 | None:intergenic |
| AATGAAAGAGTGCCCAATGG+TGG | 0.602193 | 3.3:-17547167 | MS.gene28218:CDS |
| TTATGATATTGAAGTATGGA+GGG | 0.606052 | 3.3:-17551035 | MS.gene28218:intron |
| AAGTTCAGGGTTCAACGTTG+AGG | 0.609591 | 3.3:-17547650 | MS.gene28218:intron |
| AATGGCATTGCAATAAAACC+TGG | 0.616472 | 3.3:-17549782 | MS.gene28218:CDS |
| AGCTCAATATGCAGAACACA+GGG | 0.628284 | 3.3:-17549716 | MS.gene28218:CDS |
| TACAACATATGGGATAAGGA+AGG | 0.639975 | 3.3:-17547290 | MS.gene28218:CDS |
| GAATGTACCACGCAATTCTG+GGG | 0.647077 | 3.3:+17547240 | None:intergenic |
| TTTAATGAAAGAGTGCCCAA+TGG | 0.649086 | 3.3:-17547170 | MS.gene28218:CDS |
| GGCGTTAAGGGGATGTTTAG+GGG | 0.651543 | 3.3:-17547269 | MS.gene28218:CDS |
| AAGGCATATTGCAGATGGTG+CGG | 0.663444 | 3.3:-17550752 | MS.gene28218:CDS |
| GATTCACATCCTAGCCTTGG+GGG | 0.694611 | 3.3:-17550368 | MS.gene28218:CDS |
| GTAGCGTCCCCAGAATTGCG+TGG | 0.712605 | 3.3:-17547247 | MS.gene28218:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAGCAAAAAAATA+AGG | + | chr3.3:17551123-17551142 | None:intergenic | 10.0% |
| !! | AAAGTGATTTATTAAAAAAA+AGG | + | chr3.3:17552230-17552249 | None:intergenic | 10.0% |
| !! | AAGTGATTTATTAAAAAAAA+GGG | + | chr3.3:17552229-17552248 | None:intergenic | 10.0% |
| !! | ATGAAAAATAAATTATGAAA+AGG | + | chr3.3:17551499-17551518 | None:intergenic | 10.0% |
| !! | GAAATATATGATTATTATAA+AGG | - | chr3.3:17551274-17551293 | MS.gene28218:intron | 10.0% |
| !! | TTGAACAAAAATAAATAATA+GGG | + | chr3.3:17553295-17553314 | None:intergenic | 10.0% |
| !! | TTTGAACAAAAATAAATAAT+AGG | + | chr3.3:17553296-17553315 | None:intergenic | 10.0% |
| !!! | AAAAATTAAAGCTTTTTTAT+TGG | - | chr3.3:17549480-17549499 | MS.gene28218:intron | 10.0% |
| !!! | TTTTTTAAAAGAAAAATAAG+CGG | + | chr3.3:17550367-17550386 | None:intergenic | 10.0% |
| !! | ATAAAACTAATTTACAAAGA+TGG | + | chr3.3:17549378-17549397 | None:intergenic | 15.0% |
| !! | ATAATCAGATTGTAATATAA+AGG | + | chr3.3:17548986-17549005 | None:intergenic | 15.0% |
| !! | TATTAAATAAAATGAGAAAG+CGG | + | chr3.3:17551429-17551448 | None:intergenic | 15.0% |
| !! | TTTGTTCAAATAATTTAAAC+AGG | - | chr3.3:17553306-17553325 | MS.gene28218:intron | 15.0% |
| !!! | AACATAAAAGTTAAGTTTTA+TGG | + | chr3.3:17548104-17548123 | None:intergenic | 15.0% |
| !!! | ATATTCGTAAAATCATTTTA+AGG | + | chr3.3:17551572-17551591 | None:intergenic | 15.0% |
| !!! | ATTAATAAATCACTTTTATG+AGG | - | chr3.3:17552032-17552051 | MS.gene28218:intron | 15.0% |
| !!! | ATTATAGAATTTTCTTACTT+TGG | - | chr3.3:17551849-17551868 | MS.gene28218:intron | 15.0% |
| !!! | ATTTTTTTGCTTATATTTTC+AGG | - | chr3.3:17551124-17551143 | MS.gene28218:intron | 15.0% |
| !!! | TAAACTTTTATACTAAAATC+TGG | - | chr3.3:17549546-17549565 | MS.gene28218:intron | 15.0% |
| !!! | TTAATAAATCACTTTTATGA+GGG | - | chr3.3:17552033-17552052 | MS.gene28218:intron | 15.0% |
| !!! | TTGACAAATTTTATAAAAGA+GGG | - | chr3.3:17550389-17550408 | MS.gene28218:CDS | 15.0% |
| !! | AAATATATAGGGAAAATAGA+GGG | - | chr3.3:17548250-17548269 | MS.gene28218:intron | 20.0% |
| !! | AACTGGTTATATAAGTAAAA+TGG | + | chr3.3:17551707-17551726 | None:intergenic | 20.0% |
| !! | ACTATTCTAACATGTTATTA+TGG | - | chr3.3:17553420-17553439 | MS.gene28218:intron | 20.0% |
| !! | AGAATTGAGAGAAATATATA+GGG | - | chr3.3:17548239-17548258 | MS.gene28218:intron | 20.0% |
| !! | ATAACATGTTAGAATAGTTA+TGG | + | chr3.3:17553418-17553437 | None:intergenic | 20.0% |
| !! | ATAATTTATAGTCAATCACA+AGG | + | chr3.3:17550542-17550561 | None:intergenic | 20.0% |
| !! | ATATGTTTCAACATAATGTT+GGG | + | chr3.3:17548704-17548723 | None:intergenic | 20.0% |
| !! | ATATTACAATCTGATTATCA+GGG | - | chr3.3:17548988-17549007 | MS.gene28218:intron | 20.0% |
| !! | ATTAAATAAAATGAGAAAGC+GGG | + | chr3.3:17551428-17551447 | None:intergenic | 20.0% |
| !! | ATTCATTGAAGAAAATTAAG+TGG | + | chr3.3:17553473-17553492 | None:intergenic | 20.0% |
| !! | ATTTAACAAAGACAAAACAA+TGG | + | chr3.3:17549948-17549967 | None:intergenic | 20.0% |
| !! | GAGTGTAAAAAAAATATAGA+AGG | + | chr3.3:17549671-17549690 | None:intergenic | 20.0% |
| !! | GCAATATCATATATATGAAT+TGG | + | chr3.3:17552877-17552896 | None:intergenic | 20.0% |
| !! | TAGAATTGAGAGAAATATAT+AGG | - | chr3.3:17548238-17548257 | MS.gene28218:intron | 20.0% |
| !! | TATATGTTTCAACATAATGT+TGG | + | chr3.3:17548705-17548724 | None:intergenic | 20.0% |
| !! | TATATTACAATCTGATTATC+AGG | - | chr3.3:17548987-17549006 | MS.gene28218:intron | 20.0% |
| !! | TCTATTGTATTTAGGTATAA+TGG | - | chr3.3:17553700-17553719 | MS.gene28218:intron | 20.0% |
| !! | TGATTGACTATAAATTATTC+AGG | - | chr3.3:17550544-17550563 | MS.gene28218:intron | 20.0% |
| !! | TGTATTATGATATTGAAGTA+TGG | - | chr3.3:17549990-17550009 | MS.gene28218:intron | 20.0% |
| !! | TGTCTTAGCTAAATTTAAAA+TGG | - | chr3.3:17552507-17552526 | MS.gene28218:intron | 20.0% |
| !! | TTAATAGTAATACATTGTCT+CGG | + | chr3.3:17548957-17548976 | None:intergenic | 20.0% |
| !! | TTACAAATTTCTTCAAACAT+TGG | + | chr3.3:17547310-17547329 | None:intergenic | 20.0% |
| !! | TTGCTTTATCTATTGTATTT+AGG | - | chr3.3:17553692-17553711 | MS.gene28218:intron | 20.0% |
| !! | TTGTCATTAAAAACATGATA+AGG | + | chr3.3:17553608-17553627 | None:intergenic | 20.0% |
| !!! | AATTGAAGTATTCCATTTAT+GGG | - | chr3.3:17550942-17550961 | MS.gene28218:CDS | 20.0% |
| !!! | ATAACTCTTTAAAAGCTTTT+TGG | - | chr3.3:17552261-17552280 | MS.gene28218:intron | 20.0% |
| !!! | ATAGCTCTAACTTATTTAAA+GGG | + | chr3.3:17551668-17551687 | None:intergenic | 20.0% |
| !!! | ATTATGCAAAATTGATTTTC+TGG | - | chr3.3:17553526-17553545 | MS.gene28218:intron | 20.0% |
| !!! | ATTTTGCATTTTGAAATTGA+TGG | - | chr3.3:17548882-17548901 | MS.gene28218:intron | 20.0% |
| !!! | CTTGACAAATTTTATAAAAG+AGG | - | chr3.3:17550388-17550407 | MS.gene28218:CDS | 20.0% |
| !!! | GTCTTAGCTAAATTTAAAAT+GGG | - | chr3.3:17552508-17552527 | MS.gene28218:intron | 20.0% |
| !!! | GTTTTTCTCTTATAATTTGA+TGG | - | chr3.3:17547777-17547796 | MS.gene28218:intron | 20.0% |
| !!! | TAACTCTTTAAAAGCTTTTT+GGG | - | chr3.3:17552262-17552281 | MS.gene28218:intron | 20.0% |
| !!! | TAATAAATCACTTTTATGAG+GGG | - | chr3.3:17552034-17552053 | MS.gene28218:intron | 20.0% |
| !!! | TAATTGAAGTATTCCATTTA+TGG | - | chr3.3:17550941-17550960 | MS.gene28218:CDS | 20.0% |
| !!! | TCATGTTTTTAATGACAAAA+CGG | - | chr3.3:17553610-17553629 | MS.gene28218:intron | 20.0% |
| !!! | TGAAACATATAAACTTTTGT+AGG | - | chr3.3:17548714-17548733 | MS.gene28218:intron | 20.0% |
| !!! | TTTCAAATTTTTACTAGTGT+TGG | - | chr3.3:17547571-17547590 | MS.gene28218:intron | 20.0% |
| !!! | TTTGTTTTCTAGTAATAATG+AGG | + | chr3.3:17549916-17549935 | None:intergenic | 20.0% |
| ! | AATAAACCTTCAAATTTGCA+CGG | + | chr3.3:17551044-17551063 | None:intergenic | 25.0% |
| ! | AATACTTCAATTACTTACTG+AGG | + | chr3.3:17550934-17550953 | None:intergenic | 25.0% |
| ! | AATCTGAAAATTTGACATAC+CGG | - | chr3.3:17549787-17549806 | MS.gene28218:CDS | 25.0% |
| ! | AATTTACAACATATGGGATA+AGG | - | chr3.3:17553735-17553754 | MS.gene28218:intron | 25.0% |
| ! | AGTAGAAAAGAAGAAATCTT+TGG | - | chr3.3:17553909-17553928 | MS.gene28218:CDS | 25.0% |
| ! | ATAAATCAAACATACAACTC+TGG | + | chr3.3:17549231-17549250 | None:intergenic | 25.0% |
| ! | ATAAGGTCTATATTTCTTCA+TGG | + | chr3.3:17547704-17547723 | None:intergenic | 25.0% |
| ! | ATACTAAAATCTGGTTACTA+GGG | - | chr3.3:17549555-17549574 | MS.gene28218:intron | 25.0% |
| ! | ATAGTATCACATAATTCAAC+TGG | + | chr3.3:17551724-17551743 | None:intergenic | 25.0% |
| ! | ATCAATTTCAAAATGCATGT+AGG | + | chr3.3:17548011-17548030 | None:intergenic | 25.0% |
| ! | ATTATGATATTGAAGTATGG+AGG | - | chr3.3:17549993-17550012 | MS.gene28218:intron | 25.0% |
| ! | ATTATGGTATAAATGTGTAC+CGG | - | chr3.3:17553436-17553455 | MS.gene28218:intron | 25.0% |
| ! | CATAAAAACAGAGATATTAG+AGG | - | chr3.3:17548290-17548309 | MS.gene28218:intron | 25.0% |
| ! | GAAATATATAGGGAAAATAG+AGG | - | chr3.3:17548249-17548268 | MS.gene28218:intron | 25.0% |
| ! | TAAATCAAACATACAACTCT+GGG | + | chr3.3:17549230-17549249 | None:intergenic | 25.0% |
| ! | TACAACCTTACAAGTAATTT+AGG | - | chr3.3:17549645-17549664 | MS.gene28218:intron | 25.0% |
| ! | TATACTAAAATCTGGTTACT+AGG | - | chr3.3:17549554-17549573 | MS.gene28218:intron | 25.0% |
| ! | TCAAAAATGCAGGTAAATTT+GGG | + | chr3.3:17547668-17547687 | None:intergenic | 25.0% |
| ! | TCAAGTTAAAGTTTAGTCTA+GGG | - | chr3.3:17552603-17552622 | MS.gene28218:intron | 25.0% |
| ! | TCACAGACTAATTCATTTAT+AGG | + | chr3.3:17550139-17550158 | None:intergenic | 25.0% |
| ! | TGAAGAAATATAGACCTTAT+TGG | - | chr3.3:17547704-17547723 | MS.gene28218:CDS | 25.0% |
| ! | TTATGATATTGAAGTATGGA+GGG | - | chr3.3:17549994-17550013 | MS.gene28218:intron | 25.0% |
| ! | TTCAAAAATGCAGGTAAATT+TGG | + | chr3.3:17547669-17547688 | None:intergenic | 25.0% |
| ! | TTCTCTTATAATTTGATGGA+AGG | - | chr3.3:17547781-17547800 | MS.gene28218:intron | 25.0% |
| ! | TTGTATTTAGGTATAATGGT+TGG | - | chr3.3:17553704-17553723 | MS.gene28218:intron | 25.0% |
| ! | TTTCTTCAATGAATGTTGTT+TGG | - | chr3.3:17553479-17553498 | MS.gene28218:intron | 25.0% |
| !! | AAATTATTCAGGCTTTTACA+GGG | - | chr3.3:17550555-17550574 | MS.gene28218:intron | 25.0% |
| !! | AGAAATTAGTACCGAAAAAA+TGG | + | chr3.3:17547168-17547187 | None:intergenic | 25.0% |
| !! | AGCTAAATTTAAAATGGGTT+AGG | - | chr3.3:17552513-17552532 | MS.gene28218:intron | 25.0% |
| !! | ATGGACTAAAACTAAATTGA+TGG | - | chr3.3:17553665-17553684 | MS.gene28218:intron | 25.0% |
| !! | CCATTTTATGTTAAAAACCA+AGG | - | chr3.3:17552777-17552796 | MS.gene28218:intron | 25.0% |
| !! | GCAAAATAGTATATTTTCAG+AGG | + | chr3.3:17549409-17549428 | None:intergenic | 25.0% |
| !! | GCTTTTTATGCACAATAAAA+TGG | + | chr3.3:17551091-17551110 | None:intergenic | 25.0% |
| !! | TAAAGCTTTTCTCTTTTGTT+GGG | - | chr3.3:17550229-17550248 | MS.gene28218:intron | 25.0% |
| !! | TAAATTATTCAGGCTTTTAC+AGG | - | chr3.3:17550554-17550573 | MS.gene28218:intron | 25.0% |
| !! | TCGTTATTATTTGAAATCGA+AGG | - | chr3.3:17547265-17547284 | MS.gene28218:CDS | 25.0% |
| !! | TTAAAATTGATGGTATGACA+TGG | - | chr3.3:17549457-17549476 | MS.gene28218:intron | 25.0% |
| !! | TTCAAGTTAAAGTTTAGTCT+AGG | - | chr3.3:17552602-17552621 | MS.gene28218:intron | 25.0% |
| !! | TTGAAGAATTTTGCAAACTT+GGG | - | chr3.3:17549180-17549199 | MS.gene28218:intron | 25.0% |
| !! | TTTCAAATTTTATGAGTGTC+TGG | - | chr3.3:17547875-17547894 | MS.gene28218:CDS | 25.0% |
| !! | TTTGAAGAATTTTGCAAACT+TGG | - | chr3.3:17549179-17549198 | MS.gene28218:intron | 25.0% |
| !!! | AATATCTCTGTTTTTATGCT+TGG | + | chr3.3:17548288-17548307 | None:intergenic | 25.0% |
| !!! | ATTTAATTTTCCCAATCTTG+TGG | - | chr3.3:17547380-17547399 | MS.gene28218:intron | 25.0% |
| !!! | CATAGCTCTAACTTATTTAA+AGG | + | chr3.3:17551669-17551688 | None:intergenic | 25.0% |
| !!! | CATGTTTTTAATGACAAAAC+GGG | - | chr3.3:17553611-17553630 | MS.gene28218:intron | 25.0% |
| !!! | CCTTGGTTTTTAACATAAAA+TGG | + | chr3.3:17552780-17552799 | None:intergenic | 25.0% |
| !!! | TACATGCATTTTGAAATTGA+TGG | - | chr3.3:17548010-17548029 | MS.gene28218:intron | 25.0% |
| !!! | TGACTGCATTTTAAAATTGA+TGG | - | chr3.3:17549447-17549466 | MS.gene28218:intron | 25.0% |
| !!! | TGATTATCAGGGTATTTTTT+GGG | - | chr3.3:17548999-17549018 | MS.gene28218:intron | 25.0% |
| !!! | TGATTTATTTTTCCCAATCT+TGG | - | chr3.3:17549243-17549262 | MS.gene28218:intron | 25.0% |
| !!! | TGATTTTCTGGTGTATATTA+TGG | - | chr3.3:17553538-17553557 | MS.gene28218:intron | 25.0% |
| !!! | TTTAATTTTCCCAATCTTGT+GGG | - | chr3.3:17547381-17547400 | MS.gene28218:intron | 25.0% |
| !!! | TTTGGATTGTCTTGTTTTTA+TGG | - | chr3.3:17553646-17553665 | MS.gene28218:intron | 25.0% |
| AAAATTAAGTGGTATCCTGA+TGG | + | chr3.3:17553462-17553481 | None:intergenic | 30.0% | |
| AACTTTATGCTGCATAAGAA+CGG | - | chr3.3:17548660-17548679 | MS.gene28218:intron | 30.0% | |
| AATAAAACAGAGAAAAGCAG+AGG | - | chr3.3:17548332-17548351 | MS.gene28218:intron | 30.0% | |
| AATAAAAGATGGTTCCGATA+TGG | + | chr3.3:17552651-17552670 | None:intergenic | 30.0% | |
| AATTATGAAAAGGAAAGCCT+AGG | + | chr3.3:17551489-17551508 | None:intergenic | 30.0% | |
| AGAAAAGAAGAAATCTTTGG+AGG | - | chr3.3:17553912-17553931 | MS.gene28218:CDS | 30.0% | |
| AGATATTAGAGGAAAAACAG+AGG | - | chr3.3:17548301-17548320 | MS.gene28218:intron | 30.0% | |
| AGTAATAATGAGGCTTAGTT+AGG | + | chr3.3:17549906-17549925 | None:intergenic | 30.0% | |
| ATAAGTAAAATGGCTCTTGA+GGG | + | chr3.3:17551697-17551716 | None:intergenic | 30.0% | |
| ATATTTGTCTACATTGGCAA+GGG | - | chr3.3:17551923-17551942 | MS.gene28218:intron | 30.0% | |
| ATTATGAAAAGGAAAGCCTA+GGG | + | chr3.3:17551488-17551507 | None:intergenic | 30.0% | |
| ATTTAGGTATAATGGTTGGT+TGG | - | chr3.3:17553708-17553727 | MS.gene28218:intron | 30.0% | |
| CATGTTAACAATTCCTTTGA+GGG | - | chr3.3:17553187-17553206 | MS.gene28218:intron | 30.0% | |
| CCAACAATGATTGATTATCA+TGG | - | chr3.3:17550965-17550984 | MS.gene28218:CDS | 30.0% | |
| CCATGATAATCAATCATTGT+TGG | + | chr3.3:17550968-17550987 | None:intergenic | 30.0% | |
| CGTCATTAGCAATTAGTATA+AGG | - | chr3.3:17549321-17549340 | MS.gene28218:intron | 30.0% | |
| GAATTGTTAACATGCCAATT+TGG | + | chr3.3:17553181-17553200 | None:intergenic | 30.0% | |
| GATGGATATCTAATCCAAAT+TGG | - | chr3.3:17553164-17553183 | MS.gene28218:intron | 30.0% | |
| GGATGCAATTTACAACATAT+GGG | - | chr3.3:17553729-17553748 | MS.gene28218:intron | 30.0% | |
| GGTATGACATGGAAAAATAA+AGG | - | chr3.3:17548903-17548922 | MS.gene28218:intron | 30.0% | |
| GTTAGAAATACAATGACATG+TGG | + | chr3.3:17552915-17552934 | None:intergenic | 30.0% | |
| GTTTAAAGGGTTTATATGCA+GGG | - | chr3.3:17551335-17551354 | MS.gene28218:intron | 30.0% | |
| TACCTTAACACCATTTAGAA+TGG | + | chr3.3:17550107-17550126 | None:intergenic | 30.0% | |
| TATAAGTAAAATGGCTCTTG+AGG | + | chr3.3:17551698-17551717 | None:intergenic | 30.0% | |
| TATGTATTCAAATCTTGTGC+TGG | - | chr3.3:17553005-17553024 | MS.gene28218:intron | 30.0% | |
| TATTAAAAAAAAGGGCAACC+CGG | + | chr3.3:17552221-17552240 | None:intergenic | 30.0% | |
| TCAAAATGCATGTAGGAAAA+TGG | + | chr3.3:17548004-17548023 | None:intergenic | 30.0% | |
| TCATAGAGTCAACTAAAAAG+TGG | - | chr3.3:17550632-17550651 | MS.gene28218:intron | 30.0% | |
| TCATGTTTACATTCTTTCAC+CGG | + | chr3.3:17548176-17548195 | None:intergenic | 30.0% | |
| TCCATCAATTTCAAAAATGC+AGG | + | chr3.3:17547678-17547697 | None:intergenic | 30.0% | |
| TGGATGCAATTTACAACATA+TGG | - | chr3.3:17553728-17553747 | MS.gene28218:intron | 30.0% | |
| TTATGATCAGACATAGAGAT+TGG | - | chr3.3:17552565-17552584 | MS.gene28218:intron | 30.0% | |
| ! | AATTATTCAGGCTTTTACAG+GGG | - | chr3.3:17550556-17550575 | MS.gene28218:intron | 30.0% |
| ! | ATGACATTTAGTGCATGTTT+TGG | - | chr3.3:17550340-17550359 | MS.gene28218:CDS | 30.0% |
| ! | CATCATTTTACCCTCAAAAT+AGG | + | chr3.3:17550424-17550443 | None:intergenic | 30.0% |
| ! | CCAGTTTTGCAAAACAAATA+CGG | + | chr3.3:17549855-17549874 | None:intergenic | 30.0% |
| ! | CTAAAGCTTTTCTCTTTTGT+TGG | - | chr3.3:17550228-17550247 | MS.gene28218:intron | 30.0% |
| ! | GAAGCTTTAACTTATCTGAA+TGG | + | chr3.3:17551776-17551795 | None:intergenic | 30.0% |
| ! | GTGATAAGAAGATTTGACTT+CGG | - | chr3.3:17551536-17551555 | MS.gene28218:intron | 30.0% |
| ! | TAATCATATATTTCTGCACC+AGG | + | chr3.3:17551268-17551287 | None:intergenic | 30.0% |
| ! | TGATAAGAAGATTTGACTTC+GGG | - | chr3.3:17551537-17551556 | MS.gene28218:intron | 30.0% |
| ! | TGATCTTGTTATGTAGACTT+TGG | - | chr3.3:17550494-17550513 | MS.gene28218:intron | 30.0% |
| ! | TTGAAATTGATGGTATCACA+TGG | - | chr3.3:17548020-17548039 | MS.gene28218:intron | 30.0% |
| ! | TTGAAATTGATGGTATGACA+TGG | - | chr3.3:17548892-17548911 | MS.gene28218:intron | 30.0% |
| ! | TTTTATCCGTGCAAATTTGA+AGG | - | chr3.3:17551035-17551054 | MS.gene28218:intron | 30.0% |
| !! | ACTTTGTATTCGTGTTTTGA+TGG | + | chr3.3:17550080-17550099 | None:intergenic | 30.0% |
| !! | ATATTTTCAGGAGATACACT+TGG | - | chr3.3:17551136-17551155 | MS.gene28218:intron | 30.0% |
| !! | CTTTTCTCTGTTTTATTGCT+TGG | + | chr3.3:17548329-17548348 | None:intergenic | 30.0% |
| !! | GCTGAAAAAACCTATTTTGA+GGG | - | chr3.3:17550411-17550430 | MS.gene28218:CDS | 30.0% |
| !! | GTGAAATAGTGGATACTTAT+TGG | + | chr3.3:17547972-17547991 | None:intergenic | 30.0% |
| !! | TATTTTCAGGAGATACACTT+GGG | - | chr3.3:17551137-17551156 | MS.gene28218:intron | 30.0% |
| !! | TTTATTTTTCCCAATCTTGG+CGG | - | chr3.3:17549246-17549265 | MS.gene28218:intron | 30.0% |
| !!! | ACCTGCATTTTTGAAATTGA+TGG | - | chr3.3:17547674-17547693 | MS.gene28218:CDS | 30.0% |
| !!! | CTGATTATCAGGGTATTTTT+TGG | - | chr3.3:17548998-17549017 | MS.gene28218:intron | 30.0% |
| !!! | GATTATCAGGGTATTTTTTG+GGG | - | chr3.3:17549000-17549019 | MS.gene28218:intron | 30.0% |
| !!! | GCTTCACATGTTTTTTTGAA+TGG | - | chr3.3:17551791-17551810 | MS.gene28218:intron | 30.0% |
| AAAATGCAGTCACAAAAGTG+TGG | + | chr3.3:17549439-17549458 | None:intergenic | 35.0% | |
| AACTTATCTGAATGGCTCTT+GGG | + | chr3.3:17551768-17551787 | None:intergenic | 35.0% | |
| AATCATTGTTGGCCCATAAA+TGG | + | chr3.3:17550957-17550976 | None:intergenic | 35.0% | |
| AATGGCATTGCAATAAAACC+TGG | - | chr3.3:17551247-17551266 | MS.gene28218:intron | 35.0% | |
| ACCAAATGCAGGTACAAAAA+TGG | + | chr3.3:17548819-17548838 | None:intergenic | 35.0% | |
| ACCATAATAATCAGAGTGCA+AGG | + | chr3.3:17548478-17548497 | None:intergenic | 35.0% | |
| ACCTTGCACTCTGATTATTA+TGG | - | chr3.3:17548474-17548493 | MS.gene28218:intron | 35.0% | |
| ACGTGCATTGCAATAAAAGA+TGG | + | chr3.3:17552662-17552681 | None:intergenic | 35.0% | |
| ACTTTATGCTGCATAAGAAC+GGG | - | chr3.3:17548661-17548680 | MS.gene28218:intron | 35.0% | |
| AGAAAACACGGTTCATAAGT+AGG | - | chr3.3:17548380-17548399 | MS.gene28218:intron | 35.0% | |
| AGAAATACAATGACATGTGG+TGG | + | chr3.3:17552912-17552931 | None:intergenic | 35.0% | |
| AGAGCAAAACAGAGAAAACA+CGG | - | chr3.3:17548368-17548387 | MS.gene28218:intron | 35.0% | |
| AGTGTAAATCAGTCTTACAC+TGG | + | chr3.3:17548071-17548090 | None:intergenic | 35.0% | |
| AGTTCTACTGCAATGAAGAA+TGG | - | chr3.3:17551229-17551248 | MS.gene28218:intron | 35.0% | |
| ATAATGAGGCTTAGTTAGGT+TGG | + | chr3.3:17549902-17549921 | None:intergenic | 35.0% | |
| ATACCAACATTTCTGATGGA+AGG | - | chr3.3:17547487-17547506 | MS.gene28218:intron | 35.0% | |
| ATCAGTCATGTATAGATGCT+TGG | + | chr3.3:17550451-17550470 | None:intergenic | 35.0% | |
| ATTTGTCTGTAGAACCAGAA+AGG | - | chr3.3:17550258-17550277 | MS.gene28218:intron | 35.0% | |
| CAAAGTCAAGCCATTCTAAA+TGG | - | chr3.3:17550094-17550113 | MS.gene28218:intron | 35.0% | |
| CAAATACGGTCAATTTGTGA+AGG | + | chr3.3:17549841-17549860 | None:intergenic | 35.0% | |
| CCAAATGCAGGTACAAAAAT+GGG | + | chr3.3:17548818-17548837 | None:intergenic | 35.0% | |
| CTAACTTATCAGAACTGTTG+TGG | + | chr3.3:17551634-17551653 | None:intergenic | 35.0% | |
| CTGATTATTATGGTTCCCTT+GGG | - | chr3.3:17548484-17548503 | MS.gene28218:intron | 35.0% | |
| CTGCAGATATTTGTCTACAT+TGG | - | chr3.3:17551917-17551936 | MS.gene28218:intron | 35.0% | |
| GAAAAAGTTAGAGCTTCACA+TGG | - | chr3.3:17551813-17551832 | MS.gene28218:intron | 35.0% | |
| GAAAAATACAGGCCTCTTAT+TGG | - | chr3.3:17548042-17548061 | MS.gene28218:intron | 35.0% | |
| GAAATACAATGACATGTGGT+GGG | + | chr3.3:17552911-17552930 | None:intergenic | 35.0% | |
| GAAGGCCTAAATTACTTGTA+AGG | + | chr3.3:17549653-17549672 | None:intergenic | 35.0% | |
| GATATTTGTCTACATTGGCA+AGG | - | chr3.3:17551922-17551941 | MS.gene28218:intron | 35.0% | |
| GCATGTTAACAATTCCTTTG+AGG | - | chr3.3:17553186-17553205 | MS.gene28218:intron | 35.0% | |
| GCTTAAGCAAGATGTAGTTA+AGG | + | chr3.3:17552719-17552738 | None:intergenic | 35.0% | |
| GGATTGAAGTTGTGAAATAG+TGG | + | chr3.3:17547983-17548002 | None:intergenic | 35.0% | |
| GGTATCACATGGAAAAATAC+AGG | - | chr3.3:17548031-17548050 | MS.gene28218:intron | 35.0% | |
| GGTATGACGTGGAAAAATAA+AGG | - | chr3.3:17548836-17548855 | MS.gene28218:intron | 35.0% | |
| GGTGAAAGAATGTAAACATG+AGG | - | chr3.3:17548175-17548194 | MS.gene28218:intron | 35.0% | |
| GGTTTAAAGGGTTTATATGC+AGG | - | chr3.3:17551334-17551353 | MS.gene28218:intron | 35.0% | |
| GTAATCACATATGTCTGTGT+CGG | + | chr3.3:17547534-17547553 | None:intergenic | 35.0% | |
| GTTGTTGTCATGTGATTGTA+AGG | - | chr3.3:17552079-17552098 | MS.gene28218:intron | 35.0% | |
| GTTTAAAAAGTTGCTCTCTC+AGG | - | chr3.3:17549609-17549628 | MS.gene28218:intron | 35.0% | |
| TAAACATGAGGAACGTAACA+CGG | - | chr3.3:17548187-17548206 | MS.gene28218:intron | 35.0% | |
| TAACTTATCTGAATGGCTCT+TGG | + | chr3.3:17551769-17551788 | None:intergenic | 35.0% | |
| TAAGCAAGATGTAGTTAAGG+CGG | + | chr3.3:17552716-17552735 | None:intergenic | 35.0% | |
| TAAGTAAAATGGCTCTTGAG+GGG | + | chr3.3:17551696-17551715 | None:intergenic | 35.0% | |
| TAATGAGGCTTAGTTAGGTT+GGG | + | chr3.3:17549901-17549920 | None:intergenic | 35.0% | |
| TACAACATATGGGATAAGGA+AGG | - | chr3.3:17553739-17553758 | MS.gene28218:intron | 35.0% | |
| TAGACAATAAATAGCACCCT+AGG | - | chr3.3:17551469-17551488 | MS.gene28218:intron | 35.0% | |
| TAGACTCTAGTTAATCTCCT+TGG | + | chr3.3:17552797-17552816 | None:intergenic | 35.0% | |
| TATGGATAAGCTCGTAAGAT+TGG | + | chr3.3:17552633-17552652 | None:intergenic | 35.0% | |
| TCTGATTATTATGGTTCCCT+TGG | - | chr3.3:17548483-17548502 | MS.gene28218:intron | 35.0% | |
| TCTTACGAGCTTATCCATAT+CGG | - | chr3.3:17552634-17552653 | MS.gene28218:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr3.3:17552129-17552148 | MS.gene28218:intron | 35.0% | |
| TGAAAGATGCTACAGAGTAT+GGG | - | chr3.3:17553134-17553153 | MS.gene28218:intron | 35.0% | |
| TGATTATTATGGTTCCCTTG+GGG | - | chr3.3:17548485-17548504 | MS.gene28218:intron | 35.0% | |
| TGCAGAGTTATGATCACTAT+TGG | + | chr3.3:17552975-17552994 | None:intergenic | 35.0% | |
| TGGAATACCAACATTTCTGA+TGG | - | chr3.3:17547483-17547502 | MS.gene28218:intron | 35.0% | |
| TTACACATTCTTGAGTCACT+CGG | - | chr3.3:17550769-17550788 | MS.gene28218:intron | 35.0% | |
| TTGAAAGATGCTACAGAGTA+TGG | - | chr3.3:17553133-17553152 | MS.gene28218:intron | 35.0% | |
| TTGACATAAGTTGTGTTCTC+TGG | - | chr3.3:17547463-17547482 | MS.gene28218:intron | 35.0% | |
| ! | AAAGAAGAAATCTTTGGAGG+AGG | - | chr3.3:17553915-17553934 | MS.gene28218:CDS | 35.0% |
| ! | AACGGGATATCTTTTGCATT+TGG | - | chr3.3:17553628-17553647 | MS.gene28218:intron | 35.0% |
| ! | ACTTTGGTTTCACGATTTCA+TGG | - | chr3.3:17551865-17551884 | MS.gene28218:intron | 35.0% |
| ! | AGCCATTCTAAATGGTGTTA+AGG | - | chr3.3:17550102-17550121 | MS.gene28218:intron | 35.0% |
| ! | CAATGCACGTTCTTCTTTTT+GGG | - | chr3.3:17552672-17552691 | MS.gene28218:intron | 35.0% |
| ! | CAGTCTTATATTGACATCAG+AGG | + | chr3.3:17548862-17548881 | None:intergenic | 35.0% |
| ! | GCTTTAGATGTATCAGACAA+TGG | + | chr3.3:17552453-17552472 | None:intergenic | 35.0% |
| ! | GGCTGAAAAAACCTATTTTG+AGG | - | chr3.3:17550410-17550429 | MS.gene28218:CDS | 35.0% |
| ! | GTTGCGATTTTATGTCTAGA+TGG | - | chr3.3:17548597-17548616 | MS.gene28218:intron | 35.0% |
| ! | TAACAATTCCTTTGAGGGAT+TGG | - | chr3.3:17553192-17553211 | MS.gene28218:intron | 35.0% |
| !! | GTCAACTAAAAAGTGGATTG+AGG | - | chr3.3:17550639-17550658 | MS.gene28218:intron | 35.0% |
| !! | TGGTTACTAGGGTATTTTGT+GGG | - | chr3.3:17549566-17549585 | MS.gene28218:intron | 35.0% |
| !! | TTATTTTTCCCAATCTTGGC+GGG | - | chr3.3:17549247-17549266 | MS.gene28218:intron | 35.0% |
| !! | TTTAATGAAAGAGTGCCCAA+TGG | - | chr3.3:17553859-17553878 | MS.gene28218:intron | 35.0% |
| !!! | ATTGCTGCAATGCTTTTTCT+CGG | - | chr3.3:17550829-17550848 | MS.gene28218:intron | 35.0% |
| !!! | CCGTATTTGTTTTGCAAAAC+TGG | - | chr3.3:17549852-17549871 | MS.gene28218:CDS | 35.0% |
| !!! | GTTTCTCACGACCATTTTTT+CGG | - | chr3.3:17547154-17547173 | MS.gene28218:CDS | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3.3:17552130-17552149 | None:intergenic | 35.0% |
| AAAACTAGGCTGCAAGTTCA+GGG | - | chr3.3:17553366-17553385 | MS.gene28218:intron | 40.0% | |
| AACATTGATCGAACCACCAT+TGG | + | chr3.3:17553878-17553897 | None:intergenic | 40.0% | |
| AATACCATCAAGCCAGCAAA+TGG | + | chr3.3:17551954-17551973 | None:intergenic | 40.0% | |
| ACACCTTCCATCAGAAATGT+TGG | + | chr3.3:17547493-17547512 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3.3:17552123-17552142 | MS.gene28218:intron | 40.0% | |
| ACATTGATCGAACCACCATT+GGG | + | chr3.3:17553877-17553896 | None:intergenic | 40.0% | |
| ACTTATCTGAATGGCTCTTG+GGG | + | chr3.3:17551767-17551786 | None:intergenic | 40.0% | |
| AGCTCAATATGCAGAACACA+GGG | - | chr3.3:17551313-17551332 | MS.gene28218:intron | 40.0% | |
| AGCTTGTGGTTTACTGGAAA+TGG | + | chr3.3:17547125-17547144 | None:intergenic | 40.0% | |
| AGGGAAAATAGAGGGAAAAC+AGG | - | chr3.3:17548258-17548277 | MS.gene28218:intron | 40.0% | |
| AGGGAAGGTGAACATTTCTT+TGG | - | chr3.3:17549024-17549043 | MS.gene28218:intron | 40.0% | |
| AGGGACGAATGAGACATAAA+CGG | + | chr3.3:17549735-17549754 | None:intergenic | 40.0% | |
| AGTATAAGGTGTGTCTTCTG+TGG | - | chr3.3:17549335-17549354 | MS.gene28218:intron | 40.0% | |
| AGTGCAACAACGCCATATAT+CGG | + | chr3.3:17549813-17549832 | None:intergenic | 40.0% | |
| ATCGATAACAATGGTTGGGA+GGG | + | chr3.3:17549754-17549773 | None:intergenic | 40.0% | |
| ATGCAGAACACAGGGTTTAA+AGG | - | chr3.3:17551321-17551340 | MS.gene28218:intron | 40.0% | |
| CACAACCTATAGCAATTGCA+TGG | + | chr3.3:17553101-17553120 | None:intergenic | 40.0% | |
| CAGAGTATGGGAAGAAAAGA+TGG | - | chr3.3:17553146-17553165 | MS.gene28218:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr3.3:17552124-17552143 | MS.gene28218:intron | 40.0% | |
| CCTATAGCAATTGCATGGAA+AGG | + | chr3.3:17553096-17553115 | None:intergenic | 40.0% | |
| CCTTAACAACCCACAAGATT+GGG | + | chr3.3:17547393-17547412 | None:intergenic | 40.0% | |
| CCTTTCCATGCAATTGCTAT+AGG | - | chr3.3:17553093-17553112 | MS.gene28218:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.3:17552155-17552174 | MS.gene28218:intron | 40.0% | |
| CTTAACTACTCATTCCCCAA+GGG | + | chr3.3:17548502-17548521 | None:intergenic | 40.0% | |
| CTTTATGCTGCATAAGAACG+GGG | - | chr3.3:17548662-17548681 | MS.gene28218:intron | 40.0% | |
| CTTTGGATGTCGTCAAAACT+AGG | - | chr3.3:17553352-17553371 | MS.gene28218:intron | 40.0% | |
| GAGAAATTCCACAGCCATAA+AGG | + | chr3.3:17553830-17553849 | None:intergenic | 40.0% | |
| GGAAAATAGAGGGAAAACAG+GGG | - | chr3.3:17548260-17548279 | MS.gene28218:intron | 40.0% | |
| GGAACAGTGTTGTCAAATAC+CGG | + | chr3.3:17549880-17549899 | None:intergenic | 40.0% | |
| GGGAAAATAGAGGGAAAACA+GGG | - | chr3.3:17548259-17548278 | MS.gene28218:intron | 40.0% | |
| GTCATGTGATTGTAAGGTCA+CGG | - | chr3.3:17552085-17552104 | MS.gene28218:intron | 40.0% | |
| TACACATTCTTGAGTCACTC+GGG | - | chr3.3:17550770-17550789 | MS.gene28218:intron | 40.0% | |
| TACACTCTGACAATGTAGTC+AGG | - | chr3.3:17548123-17548142 | MS.gene28218:intron | 40.0% | |
| TACGGTCAATTTGTGAAGGA+TGG | + | chr3.3:17549837-17549856 | None:intergenic | 40.0% | |
| TATAAAGGGATGTTCCATGC+AGG | - | chr3.3:17551289-17551308 | MS.gene28218:intron | 40.0% | |
| TCATAAGTAGGATCGAAGCA+CGG | - | chr3.3:17548392-17548411 | MS.gene28218:intron | 40.0% | |
| TCATGTGATTGTAAGGTCAC+GGG | - | chr3.3:17552086-17552105 | MS.gene28218:intron | 40.0% | |
| TCCTAAAACCAATCCCTCAA+AGG | + | chr3.3:17553203-17553222 | None:intergenic | 40.0% | |
| TCCTTAACAACCCACAAGAT+TGG | + | chr3.3:17547394-17547413 | None:intergenic | 40.0% | |
| TCGTACACTGACATCCAATA+AGG | + | chr3.3:17547721-17547740 | None:intergenic | 40.0% | |
| TCTTAACTACTCATTCCCCA+AGG | + | chr3.3:17548503-17548522 | None:intergenic | 40.0% | |
| TGATTCGCTGCATTAGCATA+TGG | - | chr3.3:17548561-17548580 | MS.gene28218:intron | 40.0% | |
| TGCAGAACACAGGGTTTAAA+GGG | - | chr3.3:17551322-17551341 | MS.gene28218:intron | 40.0% | |
| TTACACTGGCATCCAATAAG+AGG | + | chr3.3:17548057-17548076 | None:intergenic | 40.0% | |
| TTCAAGGCACAATTACATCC+TGG | - | chr3.3:17551206-17551225 | MS.gene28218:intron | 40.0% | |
| ! | AAGTATGGAGGGAGTTTGTT+TGG | - | chr3.3:17550005-17550024 | MS.gene28218:intron | 40.0% |
| ! | AATGTTGTTTGGAACACGTC+TGG | - | chr3.3:17553490-17553509 | MS.gene28218:intron | 40.0% |
| ! | ACTTTTATGAGGGGTAACCT+TGG | - | chr3.3:17552043-17552062 | MS.gene28218:intron | 40.0% |
| ! | AGTATGGAGGGAGTTTGTTT+GGG | - | chr3.3:17550006-17550025 | MS.gene28218:intron | 40.0% |
| ! | GCAATGCACGTTCTTCTTTT+TGG | - | chr3.3:17552671-17552690 | MS.gene28218:intron | 40.0% |
| ! | GCTAGAGCACTTAAGTACAT+CGG | + | chr3.3:17553260-17553279 | None:intergenic | 40.0% |
| ! | GTAATCACATGTGTCGATGT+CGG | + | chr3.3:17547837-17547856 | None:intergenic | 40.0% |
| !! | AATTTGATGGAAGGCGTCTT+AGG | - | chr3.3:17547790-17547809 | MS.gene28218:intron | 40.0% |
| !! | ACATCTATGAAGCACTGACA+TGG | + | chr3.3:17547618-17547637 | None:intergenic | 40.0% |
| !! | CCCATTTTTGTACCTGCATT+TGG | - | chr3.3:17548815-17548834 | MS.gene28218:intron | 40.0% |
| !! | CTGGTTACTAGGGTATTTTG+TGG | - | chr3.3:17549565-17549584 | MS.gene28218:intron | 40.0% |
| !! | GGTTACTAGGGTATTTTGTG+GGG | - | chr3.3:17549567-17549586 | MS.gene28218:intron | 40.0% |
| !! | TGGAAGGTTGATGGATTAAG+AGG | - | chr3.3:17550306-17550325 | MS.gene28218:intron | 40.0% |
| !! | TTGTTTTGCAAAACTGGCAC+CGG | - | chr3.3:17549858-17549877 | MS.gene28218:CDS | 40.0% |
| !!! | CGTGTTTTGATGGTATCTAC+CGG | + | chr3.3:17550070-17550089 | None:intergenic | 40.0% |
| !!! | CTAGTTTTGACGACATCCAA+AGG | + | chr3.3:17553354-17553373 | None:intergenic | 40.0% |
| !!! | TCCTTTGAGGGATTGGTTTT+AGG | - | chr3.3:17553199-17553218 | MS.gene28218:intron | 40.0% |
| !!! | TTTGAGGGATTGGTTTTAGG+AGG | - | chr3.3:17553202-17553221 | MS.gene28218:intron | 40.0% |
| AACGAGTTCCTACGTAGGAT+CGG | - | chr3.3:17548146-17548165 | MS.gene28218:intron | 45.0% | |
| AAGGCATATTGCAGATGGTG+CGG | - | chr3.3:17550277-17550296 | MS.gene28218:intron | 45.0% | |
| AAGTTCAGGGTTCAACGTTG+AGG | - | chr3.3:17553379-17553398 | MS.gene28218:intron | 45.0% | |
| AATCAGAGTGCAAGGTAGTC+AGG | + | chr3.3:17548470-17548489 | None:intergenic | 45.0% | |
| AATTAACTGCCCGCCAAGAT+TGG | + | chr3.3:17549259-17549278 | None:intergenic | 45.0% | |
| ACGTAACACGGTTCGTAAGT+AGG | - | chr3.3:17548199-17548218 | MS.gene28218:intron | 45.0% | |
| AGGAATGTACCACGCAATTC+TGG | + | chr3.3:17553794-17553813 | None:intergenic | 45.0% | |
| AGGCGTTAAGGGGATGTTTA+GGG | - | chr3.3:17553759-17553778 | MS.gene28218:intron | 45.0% | |
| ATAAGAACGGGGAAAAGGAG+TGG | - | chr3.3:17548673-17548692 | MS.gene28218:intron | 45.0% | |
| ATTAACTGCCCGCCAAGATT+GGG | + | chr3.3:17549258-17549277 | None:intergenic | 45.0% | |
| CAAAACTAGGCTGCAAGTTC+AGG | - | chr3.3:17553365-17553384 | MS.gene28218:intron | 45.0% | |
| CAGCAATGAAATGTGCCCAA+TGG | + | chr3.3:17550687-17550706 | None:intergenic | 45.0% | |
| CAGCTCAATATGCAGAACAC+AGG | - | chr3.3:17551312-17551331 | MS.gene28218:intron | 45.0% | |
| CATCGATAACAATGGTTGGG+AGG | + | chr3.3:17549755-17549774 | None:intergenic | 45.0% | |
| CATTGGGCACATTTCATTGC+TGG | - | chr3.3:17550685-17550704 | MS.gene28218:intron | 45.0% | |
| CATTTCATTGCTGGAGCTGT+TGG | - | chr3.3:17550694-17550713 | MS.gene28218:intron | 45.0% | |
| CCAACCATTGTTATCGATGG+CGG | - | chr3.3:17549756-17549775 | MS.gene28218:CDS | 45.0% | |
| CCATCTGCAATATGCCTTTC+TGG | + | chr3.3:17550275-17550294 | None:intergenic | 45.0% | |
| CGCCATCGATAACAATGGTT+GGG | + | chr3.3:17549758-17549777 | None:intergenic | 45.0% | |
| CTCCCAACCATTGTTATCGA+TGG | - | chr3.3:17549753-17549772 | MS.gene28218:CDS | 45.0% | |
| CTTATCTGAATGGCTCTTGG+GGG | + | chr3.3:17551766-17551785 | None:intergenic | 45.0% | |
| CTTCATTGCAGTAGAACTCC+AGG | + | chr3.3:17551227-17551246 | None:intergenic | 45.0% | |
| GAATGTACCACGCAATTCTG+GGG | + | chr3.3:17553792-17553811 | None:intergenic | 45.0% | |
| GAGAAAAGCAGAGGAAACAG+AGG | - | chr3.3:17548341-17548360 | MS.gene28218:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.3:17552154-17552173 | MS.gene28218:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.3:17552151-17552170 | MS.gene28218:intron | 45.0% | |
| GGAATGTACCACGCAATTCT+GGG | + | chr3.3:17553793-17553812 | None:intergenic | 45.0% | |
| GGGACGAATGAGACATAAAC+GGG | + | chr3.3:17549734-17549753 | None:intergenic | 45.0% | |
| GGTTCGTAAGTAGGATCGAT+AGG | - | chr3.3:17548208-17548227 | MS.gene28218:intron | 45.0% | |
| TACATAATGCGATGCTGCTG+TGG | - | chr3.3:17551003-17551022 | MS.gene28218:CDS | 45.0% | |
| TACATCGGACAACAGAGAAC+AGG | + | chr3.3:17553245-17553264 | None:intergenic | 45.0% | |
| TACCTGCATTTGGTATGACG+TGG | - | chr3.3:17548825-17548844 | MS.gene28218:intron | 45.0% | |
| TGCATATCTCACGACACCTT+TGG | - | chr3.3:17553335-17553354 | MS.gene28218:intron | 45.0% | |
| TGCTTCAGCGCTTACCTTTA+TGG | - | chr3.3:17553813-17553832 | MS.gene28218:intron | 45.0% | |
| TGGTCGTGAGAAACGTTGTT+TGG | + | chr3.3:17547148-17547167 | None:intergenic | 45.0% | |
| TTAAGTGGTATCCTGATGGC+CGG | + | chr3.3:17553458-17553477 | None:intergenic | 45.0% | |
| TTATCTGAATGGCTCTTGGG+GGG | + | chr3.3:17551765-17551784 | None:intergenic | 45.0% | |
| TTCCACGTCATACCAAATGC+AGG | + | chr3.3:17548830-17548849 | None:intergenic | 45.0% | |
| TTGACATACCGGCCGATATA+TGG | - | chr3.3:17549798-17549817 | MS.gene28218:CDS | 45.0% | |
| ! | AAGGCGTTAAGGGGATGTTT+AGG | - | chr3.3:17553758-17553777 | MS.gene28218:intron | 45.0% |
| ! | AGGATTCACATCCTAGCCTT+GGG | - | chr3.3:17550659-17550678 | MS.gene28218:intron | 45.0% |
| ! | ATAAACGGGCTTTGCAGGAT+AGG | + | chr3.3:17549720-17549739 | None:intergenic | 45.0% |
| ! | ATAAATGTGTACCGGCCATC+AGG | - | chr3.3:17553444-17553463 | MS.gene28218:intron | 45.0% |
| ! | CCAGAAAGGCATATTGCAGA+TGG | - | chr3.3:17550272-17550291 | MS.gene28218:intron | 45.0% |
| ! | CCCAATCTTGTGGGTTGTTA+AGG | - | chr3.3:17547390-17547409 | MS.gene28218:intron | 45.0% |
| ! | GAAACGTTGTTTGGAGCTTG+TGG | + | chr3.3:17547139-17547158 | None:intergenic | 45.0% |
| ! | GAGCTGTTGGTAAGCTGATT+TGG | - | chr3.3:17550707-17550726 | MS.gene28218:intron | 45.0% |
| ! | GTATGGAGGGAGTTTGTTTG+GGG | - | chr3.3:17550007-17550026 | MS.gene28218:intron | 45.0% |
| ! | GTTTGGAGCTTGTGGTTTAC+TGG | + | chr3.3:17547131-17547150 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3.3:17552119-17552138 | None:intergenic | 45.0% |
| !! | AATGAAAGAGTGCCCAATGG+TGG | - | chr3.3:17553862-17553881 | MS.gene28218:intron | 45.0% |
| !! | ATAAAGGTAAGCGCTGAAGC+AGG | + | chr3.3:17553814-17553833 | None:intergenic | 45.0% |
| !! | ATGGGATAAGGAAGGCGTTA+AGG | - | chr3.3:17553747-17553766 | MS.gene28218:intron | 45.0% |
| !! | TGGGATAAGGAAGGCGTTAA+GGG | - | chr3.3:17553748-17553767 | MS.gene28218:intron | 45.0% |
| !! | TGTACCATTTGCTGGCTTGA+TGG | - | chr3.3:17551947-17551966 | MS.gene28218:intron | 45.0% |
| !! | TTTTACAGGGGTGTAGTACC+TGG | - | chr3.3:17550568-17550587 | MS.gene28218:intron | 45.0% |
| !!! | ATCAGGGTATTTTTTGGGGC+AGG | - | chr3.3:17549004-17549023 | MS.gene28218:intron | 45.0% |
| !!! | CTTTTTGGGTGTGCGTTTCA+GGG | - | chr3.3:17552276-17552295 | MS.gene28218:intron | 45.0% |
| !!! | GGGATTGGTTTTAGGAGGAT+TGG | - | chr3.3:17553207-17553226 | MS.gene28218:intron | 45.0% |
| !!! | TCAGGGTATTTTTTGGGGCA+GGG | - | chr3.3:17549005-17549024 | MS.gene28218:intron | 45.0% |
| !!! | TTGGTTTTAGGAGGATTGGC+TGG | - | chr3.3:17553211-17553230 | MS.gene28218:intron | 45.0% |
| !! | AAATATATGATTATTATAAA+GGG | - | chr3.3:17551275-17551294 | MS.gene28218:intron | 5.0% |
| !! | TAAAATTAGAATTAAAAATT+CGG | + | chr3.3:17547199-17547218 | None:intergenic | 5.0% |
| AAGCAGCGCATGCAAGTTCA+AGG | - | chr3.3:17551190-17551209 | MS.gene28218:intron | 50.0% | |
| AGCGCTTACCTTTATGGCTG+TGG | - | chr3.3:17553819-17553838 | MS.gene28218:intron | 50.0% | |
| AGTTCCTACGTAGGATCGGT+CGG | - | chr3.3:17548150-17548169 | MS.gene28218:intron | 50.0% | |
| CAACAACGCCATATATCGGC+CGG | + | chr3.3:17549809-17549828 | None:intergenic | 50.0% | |
| CAGAACTGTTGTGGCTCTTG+AGG | + | chr3.3:17551625-17551644 | None:intergenic | 50.0% | |
| CCATCCGCCATCGATAACAA+TGG | + | chr3.3:17549763-17549782 | None:intergenic | 50.0% | |
| CCGCCATCGATAACAATGGT+TGG | + | chr3.3:17549759-17549778 | None:intergenic | 50.0% | |
| GAGGATTCACATCCTAGCCT+TGG | - | chr3.3:17550658-17550677 | MS.gene28218:intron | 50.0% | |
| GCAAGATGTAGTTAAGGCGG+AGG | + | chr3.3:17552713-17552732 | None:intergenic | 50.0% | |
| GCAAGGGATGTACCATTTGC+TGG | - | chr3.3:17551939-17551958 | MS.gene28218:intron | 50.0% | |
| GCTGCATAAGAACGGGGAAA+AGG | - | chr3.3:17548668-17548687 | MS.gene28218:intron | 50.0% | |
| GGCGTTAAGGGGATGTTTAG+GGG | - | chr3.3:17553760-17553779 | MS.gene28218:intron | 50.0% | |
| GTCGGACATCAGACACATGT+TGG | + | chr3.3:17547819-17547838 | None:intergenic | 50.0% | |
| GTTTGTTTGGGGAGCTGTTG+CGG | - | chr3.3:17550018-17550037 | MS.gene28218:intron | 50.0% | |
| TCAGGAACGAGTTCCTACGT+AGG | - | chr3.3:17548141-17548160 | MS.gene28218:intron | 50.0% | |
| TCTGGTGTCCATGTCAGTGT+CGG | - | chr3.3:17547893-17547912 | MS.gene28218:CDS | 50.0% | |
| TGCATATTGAGCTGCCTGCA+TGG | + | chr3.3:17551306-17551325 | None:intergenic | 50.0% | |
| TGGGGAAGGAATGATGCATC+CGG | - | chr3.3:17550048-17550067 | MS.gene28218:intron | 50.0% | |
| TTTGTTTGGGGAGCTGTTGC+GGG | - | chr3.3:17550019-17550038 | MS.gene28218:intron | 50.0% | |
| ! | CAAATGGTGGGACTTGTTCC+CGG | - | chr3.3:17552167-17552186 | MS.gene28218:intron | 50.0% |
| ! | CGCTGCTTTATCACTTCGCA+TGG | + | chr3.3:17551178-17551197 | None:intergenic | 50.0% |
| ! | GAGACATAAACGGGCTTTGC+AGG | + | chr3.3:17549725-17549744 | None:intergenic | 50.0% |
| ! | GCGACTGGTGCAACGTATTT+TGG | - | chr3.3:17550607-17550626 | MS.gene28218:intron | 50.0% |
| !! | ATGAAGCACCGACACTGACA+TGG | + | chr3.3:17547904-17547923 | None:intergenic | 50.0% |
| !! | CCATTGTTATCGATGGCGGA+TGG | - | chr3.3:17549760-17549779 | MS.gene28218:CDS | 50.0% |
| !! | GATTCACATCCTAGCCTTGG+GGG | - | chr3.3:17550661-17550680 | MS.gene28218:intron | 50.0% |
| !! | GGATTCACATCCTAGCCTTG+GGG | - | chr3.3:17550660-17550679 | MS.gene28218:intron | 50.0% |
| !! | GGGATAAGGAAGGCGTTAAG+GGG | - | chr3.3:17553749-17553768 | MS.gene28218:intron | 50.0% |
| !! | GGTGTAGTACCTGGTGTTAC+TGG | - | chr3.3:17550577-17550596 | MS.gene28218:intron | 50.0% |
| !! | TAGGGTATTTTGTGGGGCAG+TGG | - | chr3.3:17549573-17549592 | MS.gene28218:intron | 50.0% |
| !! | TGAAGCACTGACATGGACAC+CGG | + | chr3.3:17547611-17547630 | None:intergenic | 50.0% |
| !! | TGTCAGTGTCGGTGCTTCAT+AGG | - | chr3.3:17547904-17547923 | MS.gene28218:CDS | 50.0% |
| !! | TTGTTATCGATGGCGGATGG+CGG | - | chr3.3:17549763-17549782 | MS.gene28218:CDS | 50.0% |
| !!! | GCTTTTTGGGTGTGCGTTTC+AGG | - | chr3.3:17552275-17552294 | MS.gene28218:intron | 50.0% |
| !!! | GGTATTTTTTGGGGCAGGGA+AGG | - | chr3.3:17549009-17549028 | MS.gene28218:intron | 50.0% |
| !!! | GTTTTAGGAGGATTGGCTGG+TGG | - | chr3.3:17553214-17553233 | MS.gene28218:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr3.3:17552098-17552117 | MS.gene28218:intron | 55.0% | |
| ATCGTGCGATCCTACGTGCT+GGG | - | chr3.3:17548437-17548456 | MS.gene28218:intron | 55.0% | |
| CAACTTTGCCAGTTGCGCCA+AGG | + | chr3.3:17552063-17552082 | None:intergenic | 55.0% | |
| CGGGAACAAGTCCCACCATT+TGG | + | chr3.3:17552169-17552188 | None:intergenic | 55.0% | |
| CGGTCTGTCTGGAAGGTTGA+TGG | - | chr3.3:17550297-17550316 | MS.gene28218:intron | 55.0% | |
| CTAAGACACCTGCTGAGCAC+TGG | + | chr3.3:17552495-17552514 | None:intergenic | 55.0% | |
| GCAAGAGAGCCAGTAACACC+AGG | + | chr3.3:17550589-17550608 | None:intergenic | 55.0% | |
| TGTCACTACCAGTGCTCAGC+AGG | - | chr3.3:17552484-17552503 | MS.gene28218:intron | 55.0% | |
| ! | AGCTGTTGCGGGTGCTTTTG+GGG | - | chr3.3:17550030-17550049 | MS.gene28218:intron | 55.0% |
| ! | GAGCTGTTGCGGGTGCTTTT+GGG | - | chr3.3:17550029-17550048 | MS.gene28218:intron | 55.0% |
| !! | GTTACTGGCTCTCTTGCGAC+TGG | - | chr3.3:17550592-17550611 | MS.gene28218:intron | 55.0% |
| !! | GTTGGTGTCAGTGTCGTGTC+CGG | - | chr3.3:17547589-17547608 | MS.gene28218:intron | 55.0% |
| AATGTGCCCAATGGCCCCCA+AGG | + | chr3.3:17550678-17550697 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr3.3:17552195-17552214 | None:intergenic | 60.0% | |
| AGGAACGAGTCCCAGCACGT+AGG | + | chr3.3:17548450-17548469 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr3.3:17552052-17552071 | MS.gene28218:intron | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.3:17552199-17552218 | MS.gene28218:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr3.3:17552194-17552213 | None:intergenic | 60.0% | |
| GATCGTGCGATCCTACGTGC+TGG | - | chr3.3:17548436-17548455 | MS.gene28218:intron | 60.0% | |
| GATGGTGCGGTCTGTCTGGA+AGG | - | chr3.3:17550290-17550309 | MS.gene28218:intron | 60.0% | |
| GTAGCGTCCCCAGAATTGCG+TGG | - | chr3.3:17553782-17553801 | MS.gene28218:intron | 60.0% | |
| GTAGGATCGAAGCACGGTCG+AGG | - | chr3.3:17548398-17548417 | MS.gene28218:intron | 60.0% | |
| TGCAGATGGTGCGGTCTGTC+TGG | - | chr3.3:17550286-17550305 | MS.gene28218:intron | 60.0% | |
| ! | GGAGCTGTTGCGGGTGCTTT+TGG | - | chr3.3:17550028-17550047 | MS.gene28218:intron | 60.0% |
| ! | TGGGGGGCACATAGCTCAAC+TGG | + | chr3.3:17551749-17551768 | None:intergenic | 60.0% |
| !! | ATCCTAGCCTTGGGGGCCAT+TGG | - | chr3.3:17550668-17550687 | MS.gene28218:intron | 60.0% |
| !! | GTTGCGGGTGCTTTTGGGGA+AGG | - | chr3.3:17550034-17550053 | MS.gene28218:intron | 60.0% |
| !! | TCCTAGCCTTGGGGGCCATT+GGG | - | chr3.3:17550669-17550688 | MS.gene28218:intron | 60.0% |
| CCTACGTAGGATCGGTCGGC+CGG | - | chr3.3:17548154-17548173 | MS.gene28218:intron | 65.0% | |
| GTTCCCGGACCCTGCGTATG+CGG | - | chr3.3:17552182-17552201 | MS.gene28218:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.3:17552200-17552219 | MS.gene28218:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr3.3:17552183-17552202 | MS.gene28218:intron | 65.0% | |
| !! | GAAGCACGGTCGAGGTGCTG+TGG | - | chr3.3:17548406-17548425 | MS.gene28218:intron | 65.0% |
| CCGGCCGACCGATCCTACGT+AGG | + | chr3.3:17548157-17548176 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr3.3:17552188-17552207 | None:intergenic | 70.0% | |
| GCCCAATGGCCCCCAAGGCT+AGG | + | chr3.3:17550673-17550692 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr3.3:17552189-17552208 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 17547106 | 17553945 | 17547106 | ID=MS.gene28218 |
| chr3.3 | mRNA | 17547106 | 17553945 | 17547106 | ID=MS.gene28218.t1;Parent=MS.gene28218 |
| chr3.3 | exon | 17553876 | 17553945 | 17553876 | ID=MS.gene28218.t1.exon1;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17553876 | 17553945 | 17553876 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17550928 | 17551043 | 17550928 | ID=MS.gene28218.t1.exon2;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17550928 | 17551043 | 17550928 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17550724 | 17550781 | 17550724 | ID=MS.gene28218.t1.exon3;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17550724 | 17550781 | 17550724 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17550336 | 17550485 | 17550336 | ID=MS.gene28218.t1.exon4;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17550336 | 17550485 | 17550336 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17549695 | 17549905 | 17549695 | ID=MS.gene28218.t1.exon5;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17549695 | 17549905 | 17549695 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17549083 | 17549128 | 17549083 | ID=MS.gene28218.t1.exon6;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17549083 | 17549128 | 17549083 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17547816 | 17547936 | 17547816 | ID=MS.gene28218.t1.exon7;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17547816 | 17547936 | 17547816 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17547651 | 17547723 | 17547651 | ID=MS.gene28218.t1.exon8;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17547651 | 17547723 | 17547651 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| chr3.3 | exon | 17547106 | 17547337 | 17547106 | ID=MS.gene28218.t1.exon9;Parent=MS.gene28218.t1 |
| chr3.3 | CDS | 17547106 | 17547337 | 17547106 | ID=cds.MS.gene28218.t1;Parent=MS.gene28218.t1 |
| Gene Sequence |
| Protein sequence |
