Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35256.t1 | XP_003612831.1 | 97.1 | 377 | 10 | 1 | 1 | 376 | 1 | 377 | 1.50E-202 | 715.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35256.t1 | O82290 | 69.5 | 315 | 96 | 0 | 56 | 370 | 67 | 381 | 5.6e-126 | 452.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35256.t1 | G7KCE4 | 97.1 | 377 | 10 | 1 | 1 | 376 | 1 | 377 | 1.1e-202 | 715.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene35256 | 0.805994 | 1.02E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene35256 | 0.845924 | 3.00E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene35256 | 0.826585 | 2.50E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene35256 | 0.836965 | 6.87E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene35256 | 0.835275 | 1.84E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene35256 | 0.873762 | 1.14E-67 | -1.69E-46 |
| MS.gene050165 | MS.gene35256 | 0.853043 | 3.10E-61 | -1.69E-46 |
| MS.gene050333 | MS.gene35256 | 0.809681 | 1.68E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene35256 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene35256 | 0.826277 | 2.96E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene35256 | 0.811491 | 6.82E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene35256 | 0.82283 | 1.92E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene35256 | 0.829473 | 5.05E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene35256 | 0.857999 | 1.11E-62 | -1.69E-46 |
| MS.gene050747 | MS.gene35256 | 0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene35256 | 0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene050781 | MS.gene35256 | 0.80334 | 3.65E-49 | -1.69E-46 |
| MS.gene050950 | MS.gene35256 | 0.801645 | 8.17E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene35256 | 0.817858 | 2.65E-52 | -1.69E-46 |
| MS.gene05100 | MS.gene35256 | 0.858515 | 7.82E-63 | -1.69E-46 |
| MS.gene051551 | MS.gene35256 | 0.811996 | 5.29E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene35256 | 0.848873 | 4.64E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene35256 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene35256 | 0.832013 | 1.20E-55 | -1.69E-46 |
| MS.gene052615 | MS.gene35256 | 0.823612 | 1.26E-53 | -1.69E-46 |
| MS.gene052670 | MS.gene35256 | 0.800895 | 1.16E-48 | -1.69E-46 |
| MS.gene053009 | MS.gene35256 | 0.80192 | 7.17E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene35256 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene35256 | 0.847047 | 1.48E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene35256 | 0.841799 | 3.82E-58 | -1.69E-46 |
| MS.gene053322 | MS.gene35256 | 0.811631 | 6.36E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene35256 | 0.852478 | 4.50E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene35256 | 0.827165 | 1.82E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene35256 | 0.838802 | 2.32E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene35256 | 0.808006 | 3.83E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene35256 | 0.836419 | 9.46E-57 | -1.69E-46 |
| MS.gene055397 | MS.gene35256 | 0.831558 | 1.56E-55 | -1.69E-46 |
| MS.gene055499 | MS.gene35256 | 0.840641 | 7.69E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene35256 | 0.825673 | 4.12E-54 | -1.69E-46 |
| MS.gene056083 | MS.gene35256 | 0.820241 | 7.61E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene35256 | 0.816344 | 5.81E-52 | -1.69E-46 |
| MS.gene056449 | MS.gene35256 | 0.803087 | 4.12E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene35256 | 0.848178 | 7.23E-60 | -1.69E-46 |
| MS.gene056692 | MS.gene35256 | 0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene35256 | 0.823402 | 1.41E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene35256 | 0.822756 | 2.00E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene35256 | 0.80954 | 1.80E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene35256 | 0.843706 | 1.19E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene35256 | 0.822634 | 2.13E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene35256 | 0.842967 | 1.87E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene35256 | 0.81006 | 1.39E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene35256 | 0.835106 | 2.04E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene35256 | 0.804708 | 1.90E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene35256 | 0.813895 | 2.03E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene35256 | 0.845556 | 3.77E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene35256 | 0.861135 | 1.27E-63 | -1.69E-46 |
| MS.gene059718 | MS.gene35256 | 0.851219 | 1.02E-60 | -1.69E-46 |
| MS.gene059756 | MS.gene35256 | 0.839664 | 1.38E-57 | -1.69E-46 |
| MS.gene059858 | MS.gene35256 | 0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene35256 | 0.835597 | 1.53E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene35256 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene35256 | 0.834111 | 3.62E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene35256 | 0.828083 | 1.09E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35256.t1 | MTR_5g029550 | 97.082 | 377 | 10 | 1 | 1 | 376 | 1 | 377 | 0.0 | 739 |
| MS.gene35256.t1 | MTR_5g029550 | 96.479 | 284 | 9 | 1 | 1 | 283 | 1 | 284 | 0.0 | 547 |
| MS.gene35256.t1 | MTR_5g029550 | 96.121 | 232 | 8 | 1 | 11 | 241 | 11 | 242 | 5.13e-147 | 416 |
| MS.gene35256.t1 | MTR_1g009450 | 75.397 | 126 | 11 | 1 | 218 | 343 | 13 | 118 | 4.87e-56 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35256.t1 | AT2G35500 | 69.524 | 315 | 96 | 0 | 56 | 370 | 67 | 381 | 2.88e-157 | 447 |
Find 95 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGCTCTTCAGCCACTTTC+TGG | 0.132886 | 5.4:-19850587 | None:intergenic |
| GAACGAAGTGAGTTGAAATT+TGG | 0.220360 | 5.4:-19849547 | None:intergenic |
| GTTTCACCACCTTCACTTGA+TGG | 0.305523 | 5.4:-19853392 | None:intergenic |
| GTTGTTCTGGTTGTGAGGTT+TGG | 0.336488 | 5.4:-19849502 | None:intergenic |
| TCGTAAGTTGTGGTGGAAAC+AGG | 0.339571 | 5.4:-19849643 | None:intergenic |
| TGAGAAGTTGAGTGTTGTTC+TGG | 0.340021 | 5.4:-19849515 | None:intergenic |
| TGAAGAGCTTGCTACTGGTC+TGG | 0.344091 | 5.4:+19850599 | MS.gene35256:CDS |
| GAAGAGCTTGCTACTGGTCT+GGG | 0.347927 | 5.4:+19850600 | MS.gene35256:CDS |
| GGCAGTGAAGGAACATTTGC+AGG | 0.351085 | 5.4:-19849620 | None:intergenic |
| TTAAACCCTCGGAAACAATA+TGG | 0.358216 | 5.4:+19850314 | MS.gene35256:CDS |
| CTGCTGGAAGATCTGATAAA+TGG | 0.382309 | 5.4:+19851946 | MS.gene35256:CDS |
| ATTACAAGCATTATCATTGC+GGG | 0.392363 | 5.4:-19853421 | None:intergenic |
| TCATGGGAATCGCTCGCTGC+TGG | 0.401946 | 5.4:+19850504 | MS.gene35256:CDS |
| CTATCGGACAAGAAACTTCC+AGG | 0.403673 | 5.4:+19852679 | MS.gene35256:CDS |
| AAAATGATCCTGAGTTGAAA+TGG | 0.404730 | 5.4:+19850466 | MS.gene35256:CDS |
| ATGGAGTTAAGATTAAATAT+AGG | 0.407883 | 5.4:+19850166 | MS.gene35256:CDS |
| TTTATGCAGGATTTACTGTC+TGG | 0.408090 | 5.4:+19851976 | MS.gene35256:CDS |
| ATTGAGAAAATAACGATGAA+TGG | 0.409404 | 5.4:-19849576 | None:intergenic |
| AAGAAGCACAAAAGACATAT+TGG | 0.410030 | 5.4:+19850201 | MS.gene35256:CDS |
| AGGGCAGCAGTTGCAACATT+AGG | 0.414670 | 5.4:+19851909 | MS.gene35256:CDS |
| CTACCACTCCCGCTGCTCTC+AGG | 0.423425 | 5.4:+19849470 | MS.gene35256:CDS |
| TTCACTTGATGGATCCCAAC+CGG | 0.425148 | 5.4:-19853381 | None:intergenic |
| AAGTACAGTGACTTCGCCTT+CGG | 0.441701 | 5.4:-19851773 | None:intergenic |
| GGAGGTAAACATGGTGCTGC+TGG | 0.447752 | 5.4:+19851930 | MS.gene35256:CDS |
| TTGAGAAAATAACGATGAAT+GGG | 0.450204 | 5.4:-19849575 | None:intergenic |
| AGTGCTCTGCTAGTCATGTA+AGG | 0.451996 | 5.4:+19851889 | MS.gene35256:intron |
| ACTTACATGAATCCACAGTT+TGG | 0.453144 | 5.4:-19850839 | None:intergenic |
| GGAATCACCAACAAGATAGA+TGG | 0.454311 | 5.4:-19850553 | None:intergenic |
| GGCCTGACATCATGGAATCA+TGG | 0.458410 | 5.4:+19850487 | MS.gene35256:CDS |
| AGATGTGGTTGTGAAATTAC+AGG | 0.459192 | 5.4:+19852591 | MS.gene35256:CDS |
| GGAAGAAACCTGAGAGCAGC+GGG | 0.467446 | 5.4:-19849478 | None:intergenic |
| ATTAGTGTCTATCAACGTAA+TGG | 0.470764 | 5.4:-19850275 | None:intergenic |
| TTAGTGTCTATCAACGTAAT+GGG | 0.472184 | 5.4:-19850274 | None:intergenic |
| AAAAGCCTGTACATAAGATT+GGG | 0.473332 | 5.4:+19853326 | MS.gene35256:CDS |
| TCCCATGATTCCATGATGTC+AGG | 0.474648 | 5.4:-19850489 | None:intergenic |
| TTATGCTAAAAGTGTGGCAC+AGG | 0.483095 | 5.4:+19852627 | MS.gene35256:CDS |
| AAACCTGAGAGCAGCGGGAG+TGG | 0.486717 | 5.4:-19849473 | None:intergenic |
| GATTGGGATGTCGTGGTGAT+TGG | 0.488854 | 5.4:+19853342 | MS.gene35256:CDS |
| CACTTTCTGGTTGATTTCAG+TGG | 0.492804 | 5.4:-19850574 | None:intergenic |
| GTTCTGGTTGTGAGGTTTGG+AGG | 0.494317 | 5.4:-19849499 | None:intergenic |
| AAATGGCGACATCTTTATGC+AGG | 0.496184 | 5.4:+19851963 | MS.gene35256:CDS |
| CTGAGAGCAGCGGGAGTGGT+AGG | 0.497814 | 5.4:-19849469 | None:intergenic |
| GGAACATCCATCTATCTTGT+TGG | 0.499276 | 5.4:+19850546 | MS.gene35256:CDS |
| CTGGAAGTTTCTTGTCCGAT+AGG | 0.501338 | 5.4:-19852678 | None:intergenic |
| TCACTTGATGGATCCCAACC+GGG | 0.503267 | 5.4:-19853380 | None:intergenic |
| GAACATTTGCAGGGAGAAAG+AGG | 0.503920 | 5.4:-19849610 | None:intergenic |
| TTCTGATAATGCTTCAGAGA+TGG | 0.507023 | 5.4:+19850147 | MS.gene35256:CDS |
| ATTCCAGGGCTGCTTGCTGA+AGG | 0.508946 | 5.4:+19851736 | MS.gene35256:intron |
| GCCTGACATCATGGAATCAT+GGG | 0.510245 | 5.4:+19850488 | MS.gene35256:CDS |
| AAGATTAAATATAGGAAGCA+TGG | 0.513771 | 5.4:+19850174 | MS.gene35256:CDS |
| GTGGCTGAAGAGCTTGCTAC+TGG | 0.517891 | 5.4:+19850594 | MS.gene35256:CDS |
| TTGTCACAGACTGAAGCATC+AGG | 0.519376 | 5.4:+19851999 | MS.gene35256:CDS |
| CGTAAGTTGTGGTGGAAACA+GGG | 0.526645 | 5.4:-19849642 | None:intergenic |
| CACTGAAATCAACCAGAAAG+TGG | 0.526884 | 5.4:+19850575 | MS.gene35256:CDS |
| AGGAAGAAACCTGAGAGCAG+CGG | 0.533503 | 5.4:-19849479 | None:intergenic |
| ACATGAATCCACAGTTTGGT+TGG | 0.537166 | 5.4:-19850835 | None:intergenic |
| CACAAACCATATTGTTTCCG+AGG | 0.538620 | 5.4:-19850320 | None:intergenic |
| GACATCCCAATCTTATGTAC+AGG | 0.539700 | 5.4:-19853331 | None:intergenic |
| AGTGAAGGTGGTGAAACTCT+TGG | 0.547964 | 5.4:+19853398 | MS.gene35256:CDS |
| CCTAAAACAGTTAATCCTAT+CGG | 0.549205 | 5.4:+19852663 | MS.gene35256:CDS |
| GTTGAAATGGCCTGACATCA+TGG | 0.556044 | 5.4:+19850479 | MS.gene35256:CDS |
| TGAGTGTTGTTCTGGTTGTG+AGG | 0.562636 | 5.4:-19849507 | None:intergenic |
| GGTGGAAACAGGGGCAGTGA+AGG | 0.571453 | 5.4:-19849632 | None:intergenic |
| GCAGCAGTTGCAACATTAGG+AGG | 0.571731 | 5.4:+19851912 | MS.gene35256:CDS |
| ATGTCAGGCCATTTCAACTC+AGG | 0.577136 | 5.4:-19850474 | None:intergenic |
| CTGTACTTGAAAGCATAAGT+AGG | 0.580710 | 5.4:+19851788 | MS.gene35256:CDS |
| CACTTGATGGATCCCAACCG+GGG | 0.581260 | 5.4:-19853379 | None:intergenic |
| TATTACAAGCATTATCATTG+CGG | 0.582462 | 5.4:-19853422 | None:intergenic |
| AAGTACCTCGTAAGTTGTGG+TGG | 0.588574 | 5.4:-19849650 | None:intergenic |
| AGTAAGTACCTCGTAAGTTG+TGG | 0.600372 | 5.4:-19849653 | None:intergenic |
| AGATGAAGATTCAGCAAGGG+AGG | 0.603993 | 5.4:+19852522 | MS.gene35256:intron |
| AAGAGCTTGCTACTGGTCTG+GGG | 0.608924 | 5.4:+19850601 | MS.gene35256:CDS |
| AACATTTGCAGGGAGAAAGA+GGG | 0.608948 | 5.4:-19849609 | None:intergenic |
| GGTTGTGAAATTACAGGGAT+GGG | 0.612080 | 5.4:+19852597 | MS.gene35256:CDS |
| ACAAACCATATTGTTTCCGA+GGG | 0.614295 | 5.4:-19850319 | None:intergenic |
| TGTTTCCACCACAACTTACG+AGG | 0.616074 | 5.4:+19849645 | MS.gene35256:CDS |
| ACTTGATGGATCCCAACCGG+GGG | 0.619202 | 5.4:-19853378 | None:intergenic |
| GTGCTCTGCTAGTCATGTAA+GGG | 0.626183 | 5.4:+19851890 | MS.gene35256:intron |
| AACTTATTCCAACCAAACTG+TGG | 0.626590 | 5.4:+19850827 | MS.gene35256:CDS |
| TACAGATGAAGATTCAGCAA+GGG | 0.627827 | 5.4:+19852519 | MS.gene35256:intron |
| TGGTTGTGAAATTACAGGGA+TGG | 0.647286 | 5.4:+19852596 | MS.gene35256:CDS |
| GGTTCTGACTCAGTAGCCGA+AGG | 0.651113 | 5.4:+19851757 | MS.gene35256:CDS |
| TGGGATCCATCAAGTGAAGG+TGG | 0.654631 | 5.4:+19853386 | MS.gene35256:CDS |
| GGTTGGGATCCATCAAGTGA+AGG | 0.654783 | 5.4:+19853383 | MS.gene35256:CDS |
| TGCATATACGAATGCAGATG+TGG | 0.657277 | 5.4:+19852576 | MS.gene35256:CDS |
| GCAGTGAAGGAACATTTGCA+GGG | 0.659693 | 5.4:-19849619 | None:intergenic |
| TACATAAGATTGGGATGTCG+TGG | 0.660254 | 5.4:+19853335 | MS.gene35256:CDS |
| TCCAGCTTATGCTAAAAGTG+TGG | 0.662235 | 5.4:+19852621 | MS.gene35256:CDS |
| TATAGATGATGATCATCTTG+TGG | 0.662960 | 5.4:+19850431 | MS.gene35256:CDS |
| ATACAGATGAAGATTCAGCA+AGG | 0.667293 | 5.4:+19852518 | MS.gene35256:intron |
| TATGCTAAAAGTGTGGCACA+GGG | 0.670065 | 5.4:+19852628 | MS.gene35256:CDS |
| GTAAGTTGTGGTGGAAACAG+GGG | 0.682098 | 5.4:-19849641 | None:intergenic |
| GCAACATTAGGAGGTAAACA+TGG | 0.688881 | 5.4:+19851921 | MS.gene35256:CDS |
| GATGTGGTTGTGAAATTACA+GGG | 0.701042 | 5.4:+19852592 | MS.gene35256:CDS |
| CTTGATGGATCCCAACCGGG+GGG | 0.707433 | 5.4:-19853377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAACTATGTTAAAAA+TGG | + | chr5.4:19850345-19850364 | MS.gene35256:intron | 10.0% |
| !! | GCAAATATATATCAAAATAT+TGG | - | chr5.4:19851440-19851459 | None:intergenic | 15.0% |
| !! | TCTAATTATCAATATTCATA+AGG | + | chr5.4:19850646-19850665 | MS.gene35256:intron | 15.0% |
| !!! | ATTTTAGTTGATATGTTATT+TGG | + | chr5.4:19852024-19852043 | MS.gene35256:intron | 15.0% |
| !! | AAATGATTCAAGAAAAATGA+TGG | - | chr5.4:19851311-19851330 | None:intergenic | 20.0% |
| !! | ATGGAGTTAAGATTAAATAT+AGG | + | chr5.4:19850166-19850185 | MS.gene35256:CDS | 20.0% |
| !! | TAAGTTAGAATCAATTATTG+AGG | + | chr5.4:19849848-19849867 | MS.gene35256:intron | 20.0% |
| !! | TGGATAAACAGTTTAATTAA+GGG | + | chr5.4:19852865-19852884 | MS.gene35256:intron | 20.0% |
| !! | TTGGATAAACAGTTTAATTA+AGG | + | chr5.4:19852864-19852883 | MS.gene35256:intron | 20.0% |
| !!! | AATTTCTTCATTTCATTTTC+TGG | + | chr5.4:19851817-19851836 | MS.gene35256:intron | 20.0% |
| !!! | ATAATTGATTTTGACATGTT+TGG | - | chr5.4:19849896-19849915 | None:intergenic | 20.0% |
| !!! | CTTTTTGTAATTTGATCTTT+TGG | + | chr5.4:19850069-19850088 | MS.gene35256:intron | 20.0% |
| !!! | TGTTATCTTAGTTAGTTTTA+AGG | + | chr5.4:19849970-19849989 | MS.gene35256:intron | 20.0% |
| !!! | TTGTTGGAAATTTTTCAAAA+CGG | + | chr5.4:19852226-19852245 | MS.gene35256:intron | 20.0% |
| !!! | TTTTGAAAAATTTCCAACAA+AGG | - | chr5.4:19852226-19852245 | None:intergenic | 20.0% |
| ! | AAAATTGTATGTGTTACAAG+AGG | - | chr5.4:19850019-19850038 | None:intergenic | 25.0% |
| ! | AACAAATGTAATCATATTCC+AGG | + | chr5.4:19851721-19851740 | MS.gene35256:intron | 25.0% |
| ! | AAGATTAAATATAGGAAGCA+TGG | + | chr5.4:19850174-19850193 | MS.gene35256:CDS | 25.0% |
| ! | ACAAATGTAATCATATTCCA+GGG | + | chr5.4:19851722-19851741 | MS.gene35256:intron | 25.0% |
| ! | ATATAGGATTTAAGTGACTA+AGG | - | chr5.4:19851688-19851707 | None:intergenic | 25.0% |
| ! | ATTGAGAAAATAACGATGAA+TGG | - | chr5.4:19849579-19849598 | None:intergenic | 25.0% |
| ! | GTTAATACACTGCAATATAT+AGG | - | chr5.4:19851704-19851723 | None:intergenic | 25.0% |
| ! | TAATATTACAATAGAACCCT+AGG | + | chr5.4:19851003-19851022 | MS.gene35256:intron | 25.0% |
| ! | TGACATTCATTATGTTTCTT+AGG | - | chr5.4:19853124-19853143 | None:intergenic | 25.0% |
| ! | TTGAGAAAATAACGATGAAT+GGG | - | chr5.4:19849578-19849597 | None:intergenic | 25.0% |
| ! | TTTGATATATATTTGCGAGT+TGG | + | chr5.4:19851444-19851463 | MS.gene35256:intron | 25.0% |
| !! | ATCAGTTTGACTCTAATTTT+AGG | + | chr5.4:19851076-19851095 | MS.gene35256:intron | 25.0% |
| !! | ATTAATATCCCTGACATTTT+TGG | - | chr5.4:19851487-19851506 | None:intergenic | 25.0% |
| !! | ATTTACGTGAAAATGGTTTT+TGG | + | chr5.4:19849708-19849727 | MS.gene35256:intron | 25.0% |
| !!! | CAAAGATTTGTTACAAATTG+AGG | + | chr5.4:19851232-19851251 | MS.gene35256:intron | 25.0% |
| !!! | TGAGTTTGTTTTATAACTGA+TGG | + | chr5.4:19850096-19850115 | MS.gene35256:intron | 25.0% |
| AAAAAGCCTGTACATAAGAT+TGG | + | chr5.4:19853325-19853344 | MS.gene35256:CDS | 30.0% | |
| AAAAGCCTGTACATAAGATT+GGG | + | chr5.4:19853326-19853345 | MS.gene35256:CDS | 30.0% | |
| AACAAGCATTTACGTGAAAA+TGG | + | chr5.4:19849701-19849720 | MS.gene35256:intron | 30.0% | |
| AAGTGAGAAAACTAAACAAG+GGG | + | chr5.4:19852270-19852289 | MS.gene35256:intron | 30.0% | |
| AGAAGTGAGAAAACTAAACA+AGG | + | chr5.4:19852268-19852287 | MS.gene35256:intron | 30.0% | |
| ATGATTGAATCAACCTTTGT+TGG | + | chr5.4:19852210-19852229 | MS.gene35256:intron | 30.0% | |
| ATTAGTGTCTATCAACGTAA+TGG | - | chr5.4:19850278-19850297 | None:intergenic | 30.0% | |
| CCTAAAACAGTTAATCCTAT+CGG | + | chr5.4:19852663-19852682 | MS.gene35256:CDS | 30.0% | |
| CTAGTAAGAGACATTACTAT+AGG | - | chr5.4:19851045-19851064 | None:intergenic | 30.0% | |
| GAAGTGAGAAAACTAAACAA+GGG | + | chr5.4:19852269-19852288 | MS.gene35256:intron | 30.0% | |
| GATAAAATTTCTTCGAGTCA+AGG | - | chr5.4:19852135-19852154 | None:intergenic | 30.0% | |
| TATAGATGATGATCATCTTG+TGG | + | chr5.4:19850431-19850450 | MS.gene35256:CDS | 30.0% | |
| TCATTACAAAGATTGTGTGT+TGG | + | chr5.4:19852153-19852172 | MS.gene35256:intron | 30.0% | |
| TCTAAATGTACCTTCTACAT+GGG | + | chr5.4:19853221-19853240 | MS.gene35256:intron | 30.0% | |
| TGTTTGTTTCCATTTCTTTG+AGG | - | chr5.4:19849940-19849959 | None:intergenic | 30.0% | |
| TTACTCGAAAGATATTAGCA+CGG | + | chr5.4:19851603-19851622 | MS.gene35256:intron | 30.0% | |
| TTAGTGTCTATCAACGTAAT+GGG | - | chr5.4:19850277-19850296 | None:intergenic | 30.0% | |
| TTCTAAATGTACCTTCTACA+TGG | + | chr5.4:19853220-19853239 | MS.gene35256:intron | 30.0% | |
| TTTAATGTTCATCTCTTCTC+AGG | + | chr5.4:19850772-19850791 | MS.gene35256:intron | 30.0% | |
| ! | AAAATGATCCTGAGTTGAAA+TGG | + | chr5.4:19850466-19850485 | MS.gene35256:CDS | 30.0% |
| ! | AACAAAGGTTGATTCAATCA+TGG | - | chr5.4:19852211-19852230 | None:intergenic | 30.0% |
| ! | AAGAAGCACAAAAGACATAT+TGG | + | chr5.4:19850201-19850220 | MS.gene35256:CDS | 30.0% |
| ! | AGTAACTCTTTTGTACTTAG+TGG | - | chr5.4:19850804-19850823 | None:intergenic | 30.0% |
| ! | CATTTCGTTAAGAGTATGTT+TGG | + | chr5.4:19852845-19852864 | MS.gene35256:intron | 30.0% |
| ! | CGATAGGATTAACTGTTTTA+GGG | - | chr5.4:19852665-19852684 | None:intergenic | 30.0% |
| ! | GCTCAAGATTTTATGTCATA+AGG | + | chr5.4:19853169-19853188 | MS.gene35256:intron | 30.0% |
| ! | TCAATTTTGCCTCAAAGAAA+TGG | + | chr5.4:19849928-19849947 | MS.gene35256:intron | 30.0% |
| ! | TGCTAATATCTTTCGAGTAA+GGG | - | chr5.4:19851603-19851622 | None:intergenic | 30.0% |
| !! | AATAGCTCTAAGATAAACCT+CGG | - | chr5.4:19851540-19851559 | None:intergenic | 30.0% |
| !! | AATTTTAGGTACTGCCTTAA+AGG | + | chr5.4:19851090-19851109 | MS.gene35256:intron | 30.0% |
| !! | CAGAAGTTTGATGTTTTAAG+GGG | - | chr5.4:19852799-19852818 | None:intergenic | 30.0% |
| !! | CCAGAAGTTTGATGTTTTAA+GGG | - | chr5.4:19852800-19852819 | None:intergenic | 30.0% |
| !! | GAAATTTTTCAAAACGGTGT+GGG | + | chr5.4:19852232-19852251 | MS.gene35256:intron | 30.0% |
| !! | TGTTTTCAAGGTTCAAAACA+AGG | - | chr5.4:19852094-19852113 | None:intergenic | 30.0% |
| !! | TTTTTGGCAAAGTTCACTTA+AGG | - | chr5.4:19851471-19851490 | None:intergenic | 30.0% |
| !!! | GCATCTTGTTTTAGTATAAG+AGG | + | chr5.4:19851630-19851649 | MS.gene35256:intron | 30.0% |
| !!! | TAGTTTTAAGGATCTAAACC+TGG | + | chr5.4:19849982-19850001 | MS.gene35256:intron | 30.0% |
| !!! | TGTACCTTGTTTTTTTCTTC+CGG | + | chr5.4:19850870-19850889 | MS.gene35256:intron | 30.0% |
| !!! | TGTTTTAGTATAAGAGGACA+TGG | + | chr5.4:19851636-19851655 | MS.gene35256:intron | 30.0% |
| AAAAGCCATGAATTGCATCA+AGG | - | chr5.4:19851285-19851304 | None:intergenic | 35.0% | |
| AAACAATCTCACGAGTGTTT+AGG | - | chr5.4:19852325-19852344 | None:intergenic | 35.0% | |
| AACTTATTCCAACCAAACTG+TGG | + | chr5.4:19850827-19850846 | MS.gene35256:CDS | 35.0% | |
| AATAAATCAGCACAAGTACC+TGG | - | chr5.4:19852700-19852719 | None:intergenic | 35.0% | |
| ACAAACCATATTGTTTCCGA+GGG | - | chr5.4:19850322-19850341 | None:intergenic | 35.0% | |
| ACAAAGATTGTGTGTTGGAT+GGG | + | chr5.4:19852158-19852177 | MS.gene35256:intron | 35.0% | |
| ACACTGATAATAGGCAGAAT+TGG | - | chr5.4:19851147-19851166 | None:intergenic | 35.0% | |
| ACATCCGGAAGAAAAAAACA+AGG | - | chr5.4:19850877-19850896 | None:intergenic | 35.0% | |
| ACTCAAACAGTCAAATGGAT+TGG | - | chr5.4:19852751-19852770 | None:intergenic | 35.0% | |
| ACTTACATGAATCCACAGTT+TGG | - | chr5.4:19850842-19850861 | None:intergenic | 35.0% | |
| AGATGTGGTTGTGAAATTAC+AGG | + | chr5.4:19852591-19852610 | MS.gene35256:CDS | 35.0% | |
| AGTCGAAGTAACACACATAA+CGG | - | chr5.4:19851210-19851229 | None:intergenic | 35.0% | |
| ATACAGATGAAGATTCAGCA+AGG | + | chr5.4:19852518-19852537 | MS.gene35256:intron | 35.0% | |
| CAACTACTCAAACAGTCAAA+TGG | - | chr5.4:19852756-19852775 | None:intergenic | 35.0% | |
| CCCTTAAAACATCAAACTTC+TGG | + | chr5.4:19852797-19852816 | MS.gene35256:intron | 35.0% | |
| GAACTTTGCCAAAAATGTCA+GGG | + | chr5.4:19851476-19851495 | MS.gene35256:intron | 35.0% | |
| GATGTGGTTGTGAAATTACA+GGG | + | chr5.4:19852592-19852611 | MS.gene35256:CDS | 35.0% | |
| GGAGAAATAATTATGCGAAG+TGG | + | chr5.4:19850679-19850698 | MS.gene35256:intron | 35.0% | |
| GGTTTAATCCTGTCAAAAAG+AGG | - | chr5.4:19850301-19850320 | None:intergenic | 35.0% | |
| GTCTAGACTTAAAGCCTTTA+AGG | - | chr5.4:19851107-19851126 | None:intergenic | 35.0% | |
| TACAAAGATTGTGTGTTGGA+TGG | + | chr5.4:19852157-19852176 | MS.gene35256:intron | 35.0% | |
| TACAGATGAAGATTCAGCAA+GGG | + | chr5.4:19852519-19852538 | MS.gene35256:intron | 35.0% | |
| TATTCATAAGGCTCGTAACT+AGG | + | chr5.4:19850658-19850677 | MS.gene35256:intron | 35.0% | |
| TCAAAACAAGGTTGGACTAT+TGG | - | chr5.4:19852082-19852101 | None:intergenic | 35.0% | |
| TGAACTTTGCCAAAAATGTC+AGG | + | chr5.4:19851475-19851494 | MS.gene35256:intron | 35.0% | |
| TTAAACCCTCGGAAACAATA+TGG | + | chr5.4:19850314-19850333 | MS.gene35256:CDS | 35.0% | |
| TTCAAGGTTCAAAACAAGGT+TGG | - | chr5.4:19852090-19852109 | None:intergenic | 35.0% | |
| TTCCATGTGACACTGATAAT+AGG | - | chr5.4:19851156-19851175 | None:intergenic | 35.0% | |
| TTTATGCAGGATTTACTGTC+TGG | + | chr5.4:19851976-19851995 | MS.gene35256:CDS | 35.0% | |
| ! | ACACTAATCCTCTTTTTGAC+AGG | + | chr5.4:19850290-19850309 | MS.gene35256:CDS | 35.0% |
| ! | CCGATAGGATTAACTGTTTT+AGG | - | chr5.4:19852666-19852685 | None:intergenic | 35.0% |
| ! | CTGTACTTGAAAGCATAAGT+AGG | + | chr5.4:19851788-19851807 | MS.gene35256:CDS | 35.0% |
| ! | GAACGAAGTGAGTTGAAATT+TGG | - | chr5.4:19849550-19849569 | None:intergenic | 35.0% |
| ! | GCCAGAAGTTTGATGTTTTA+AGG | - | chr5.4:19852801-19852820 | None:intergenic | 35.0% |
| ! | GCTAATATCTTTCGAGTAAG+GGG | - | chr5.4:19851602-19851621 | None:intergenic | 35.0% |
| ! | GGAATTTTGAACCGTATTGT+GGG | + | chr5.4:19850366-19850385 | MS.gene35256:intron | 35.0% |
| ! | GTGCTAATATCTTTCGAGTA+AGG | - | chr5.4:19851604-19851623 | None:intergenic | 35.0% |
| ! | TGCTTGTTACTAAGTGTAGA+AGG | - | chr5.4:19849689-19849708 | None:intergenic | 35.0% |
| ! | TGGAATTTTGAACCGTATTG+TGG | + | chr5.4:19850365-19850384 | MS.gene35256:intron | 35.0% |
| ! | TTCTGATAATGCTTCAGAGA+TGG | + | chr5.4:19850147-19850166 | MS.gene35256:CDS | 35.0% |
| ! | TTCTGGATACTTTTGTTGCT+AGG | + | chr5.4:19851834-19851853 | MS.gene35256:intron | 35.0% |
| ! | TTTTGACAGGATTAAACCCT+CGG | + | chr5.4:19850303-19850322 | MS.gene35256:CDS | 35.0% |
| !! | ATAGCTCTAAGATAAACCTC+GGG | - | chr5.4:19851539-19851558 | None:intergenic | 35.0% |
| !! | GATTTTGACATGTTTGGTTC+TGG | - | chr5.4:19849890-19849909 | None:intergenic | 35.0% |
| !! | GGAAATTTTTCAAAACGGTG+TGG | + | chr5.4:19852231-19852250 | MS.gene35256:intron | 35.0% |
| !! | TGGTTGAATGGTTCTGATTT+GGG | + | chr5.4:19850402-19850421 | MS.gene35256:intron | 35.0% |
| !!! | TCTGTTTGTGAGTTGGTTTT+TGG | + | chr5.4:19851395-19851414 | MS.gene35256:intron | 35.0% |
| !!! | TGACTCATCTCTTGTTTTCA+AGG | - | chr5.4:19852106-19852125 | None:intergenic | 35.0% |
| !!! | TTTGTGAGTTGGTTTTTGGA+GGG | + | chr5.4:19851399-19851418 | MS.gene35256:intron | 35.0% |
| !!! | TTTTTTCTTCCGGATGTCTT+GGG | + | chr5.4:19850880-19850899 | MS.gene35256:intron | 35.0% |
| !!! | TTTTTTTCTTCCGGATGTCT+TGG | + | chr5.4:19850879-19850898 | MS.gene35256:intron | 35.0% |
| AAACTTCTGGCCTGATAACT+TGG | + | chr5.4:19852810-19852829 | MS.gene35256:intron | 40.0% | |
| AAAGATTGTGTGTTGGATGG+GGG | + | chr5.4:19852160-19852179 | MS.gene35256:intron | 40.0% | |
| AAATGGCGACATCTTTATGC+AGG | + | chr5.4:19851963-19851982 | MS.gene35256:CDS | 40.0% | |
| AACATTTGCAGGGAGAAAGA+GGG | - | chr5.4:19849612-19849631 | None:intergenic | 40.0% | |
| AACTCACAAACAGACCCTTA+AGG | - | chr5.4:19851389-19851408 | None:intergenic | 40.0% | |
| AAGCAACTGTCCAAGTTATC+AGG | - | chr5.4:19852823-19852842 | None:intergenic | 40.0% | |
| ACATGAATCCACAGTTTGGT+TGG | - | chr5.4:19850838-19850857 | None:intergenic | 40.0% | |
| AGTAAGTACCTCGTAAGTTG+TGG | - | chr5.4:19849656-19849675 | None:intergenic | 40.0% | |
| ATGAATTGCATCAAGGACAG+AGG | - | chr5.4:19851278-19851297 | None:intergenic | 40.0% | |
| ATTTCGCCTTTGTGGTTGAA+TGG | + | chr5.4:19850390-19850409 | MS.gene35256:intron | 40.0% | |
| CAAAGATTGTGTGTTGGATG+GGG | + | chr5.4:19852159-19852178 | MS.gene35256:intron | 40.0% | |
| CACAAACCATATTGTTTCCG+AGG | - | chr5.4:19850323-19850342 | None:intergenic | 40.0% | |
| CACTCACACAATTCATCCTA+GGG | - | chr5.4:19851022-19851041 | None:intergenic | 40.0% | |
| CACTGAAATCAACCAGAAAG+TGG | + | chr5.4:19850575-19850594 | MS.gene35256:CDS | 40.0% | |
| CAGAGTTGCACATCAATCAT+AGG | - | chr5.4:19850724-19850743 | None:intergenic | 40.0% | |
| CCTTCTACATGGGATGAAAA+TGG | + | chr5.4:19853231-19853250 | MS.gene35256:intron | 40.0% | |
| CTGCTGGAAGATCTGATAAA+TGG | + | chr5.4:19851946-19851965 | MS.gene35256:CDS | 40.0% | |
| GACATCCCAATCTTATGTAC+AGG | - | chr5.4:19853334-19853353 | None:intergenic | 40.0% | |
| GCAACATTAGGAGGTAAACA+TGG | + | chr5.4:19851921-19851940 | MS.gene35256:CDS | 40.0% | |
| GGAACATCCATCTATCTTGT+TGG | + | chr5.4:19850546-19850565 | MS.gene35256:CDS | 40.0% | |
| GGAATCACCAACAAGATAGA+TGG | - | chr5.4:19850556-19850575 | None:intergenic | 40.0% | |
| GGAGTCTAATGTGACATCAA+GGG | - | chr5.4:19852730-19852749 | None:intergenic | 40.0% | |
| GGTTGTGAAATTACAGGGAT+GGG | + | chr5.4:19852597-19852616 | MS.gene35256:CDS | 40.0% | |
| TACAAATTGAGGAACCAGTC+TGG | + | chr5.4:19851243-19851262 | MS.gene35256:intron | 40.0% | |
| TACATAAGATTGGGATGTCG+TGG | + | chr5.4:19853335-19853354 | MS.gene35256:CDS | 40.0% | |
| TCAGAACCATTCAACCACAA+AGG | - | chr5.4:19850399-19850418 | None:intergenic | 40.0% | |
| TCCAGCTTATGCTAAAAGTG+TGG | + | chr5.4:19852621-19852640 | MS.gene35256:CDS | 40.0% | |
| TCTGTCCTTGATGCAATTCA+TGG | + | chr5.4:19851277-19851296 | MS.gene35256:intron | 40.0% | |
| TGAGCTGAACCAAACATGTT+TGG | + | chr5.4:19849800-19849819 | MS.gene35256:intron | 40.0% | |
| TGATGTGCAACTCTGATCAA+TGG | + | chr5.4:19850729-19850748 | MS.gene35256:intron | 40.0% | |
| TGCATATACGAATGCAGATG+TGG | + | chr5.4:19852576-19852595 | MS.gene35256:CDS | 40.0% | |
| TGCCTATTATCAGTGTCACA+TGG | + | chr5.4:19851151-19851170 | MS.gene35256:intron | 40.0% | |
| TGGAGTCTAATGTGACATCA+AGG | - | chr5.4:19852731-19852750 | None:intergenic | 40.0% | |
| TGGTTGTGAAATTACAGGGA+TGG | + | chr5.4:19852596-19852615 | MS.gene35256:CDS | 40.0% | |
| TGTGTTACAAGAGGACAGTT+CGG | - | chr5.4:19850010-19850029 | None:intergenic | 40.0% | |
| TTAAGGGTCTGTTTGTGAGT+TGG | + | chr5.4:19851388-19851407 | MS.gene35256:intron | 40.0% | |
| ! | ACTATCAGAGTTTTGCAGTC+AGG | + | chr5.4:19850247-19850266 | MS.gene35256:CDS | 40.0% |
| ! | CCATTTTCATCCCATGTAGA+AGG | - | chr5.4:19853234-19853253 | None:intergenic | 40.0% |
| ! | CTTTTGCCTCCAAACATGTT+TGG | - | chr5.4:19849812-19849831 | None:intergenic | 40.0% |
| ! | GGATCATCACAGCTTTTGAA+AGG | + | chr5.4:19850525-19850544 | MS.gene35256:CDS | 40.0% |
| ! | TATGCTAAAAGTGTGGCACA+GGG | + | chr5.4:19852628-19852647 | MS.gene35256:CDS | 40.0% |
| ! | TGAGAAGTTGAGTGTTGTTC+TGG | - | chr5.4:19849518-19849537 | None:intergenic | 40.0% |
| ! | TGGTTGGCCATGATAAAAGT+GGG | + | chr5.4:19851357-19851376 | MS.gene35256:intron | 40.0% |
| ! | TTATCATGGCCAACCACTTT+TGG | - | chr5.4:19851353-19851372 | None:intergenic | 40.0% |
| ! | TTATGCTAAAAGTGTGGCAC+AGG | + | chr5.4:19852627-19852646 | MS.gene35256:CDS | 40.0% |
| !! | AAAAGTGGGTTGTGACCTTA+AGG | + | chr5.4:19851371-19851390 | MS.gene35256:intron | 40.0% |
| !! | AAAGTGGGTTGTGACCTTAA+GGG | + | chr5.4:19851372-19851391 | MS.gene35256:intron | 40.0% |
| !! | ATTTTTCAAAACGGTGTGGG+TGG | + | chr5.4:19852235-19852254 | MS.gene35256:intron | 40.0% |
| !! | CACTTTCTGGTTGATTTCAG+TGG | - | chr5.4:19850577-19850596 | None:intergenic | 40.0% |
| !! | GTCACAACCCACTTTTATCA+TGG | - | chr5.4:19851367-19851386 | None:intergenic | 40.0% |
| !! | GTGGTTGAATGGTTCTGATT+TGG | + | chr5.4:19850401-19850420 | MS.gene35256:intron | 40.0% |
| !! | TAGCTCTAAGATAAACCTCG+GGG | - | chr5.4:19851538-19851557 | None:intergenic | 40.0% |
| !! | TATCATGGCCAACCACTTTT+GGG | - | chr5.4:19851352-19851371 | None:intergenic | 40.0% |
| !! | TTTTTCAAAACGGTGTGGGT+GGG | + | chr5.4:19852236-19852255 | MS.gene35256:intron | 40.0% |
| !!! | AGTTGGTTTTTGGAGGGTTT+TGG | + | chr5.4:19851405-19851424 | MS.gene35256:intron | 40.0% |
| !!! | GTTTGTGAGTTGGTTTTTGG+AGG | + | chr5.4:19851398-19851417 | MS.gene35256:intron | 40.0% |
| AAGGAATAGCCCAAGACATC+CGG | - | chr5.4:19850892-19850911 | None:intergenic | 45.0% | |
| AAGGCGAAATGCCCACAATA+CGG | - | chr5.4:19850380-19850399 | None:intergenic | 45.0% | |
| AAGTACAGTGACTTCGCCTT+CGG | - | chr5.4:19851776-19851795 | None:intergenic | 45.0% | |
| AAGTACCTCGTAAGTTGTGG+TGG | - | chr5.4:19849653-19849672 | None:intergenic | 45.0% | |
| AATCATTTCAGACCCCATCC+CGG | + | chr5.4:19851323-19851342 | MS.gene35256:intron | 45.0% | |
| AATCCTAGACTTGCAACCCT+CGG | + | chr5.4:19851504-19851523 | MS.gene35256:intron | 45.0% | |
| AATTGCATCAAGGACAGAGG+AGG | - | chr5.4:19851275-19851294 | None:intergenic | 45.0% | |
| AGAGGAGGAAAAAACCAGAC+TGG | - | chr5.4:19851260-19851279 | None:intergenic | 45.0% | |
| AGATGAAGATTCAGCAAGGG+AGG | + | chr5.4:19852522-19852541 | MS.gene35256:intron | 45.0% | |
| AGTGAAGGTGGTGAAACTCT+TGG | + | chr5.4:19853398-19853417 | MS.gene35256:CDS | 45.0% | |
| AGTGCTCTGCTAGTCATGTA+AGG | + | chr5.4:19851889-19851908 | MS.gene35256:intron | 45.0% | |
| ATGTCAGGCCATTTCAACTC+AGG | - | chr5.4:19850477-19850496 | None:intergenic | 45.0% | |
| CACACATAACGGCTACAGAA+AGG | - | chr5.4:19851199-19851218 | None:intergenic | 45.0% | |
| CTATCGGACAAGAAACTTCC+AGG | + | chr5.4:19852679-19852698 | MS.gene35256:CDS | 45.0% | |
| CTGGAAGTTTCTTGTCCGAT+AGG | - | chr5.4:19852681-19852700 | None:intergenic | 45.0% | |
| GAACATTTGCAGGGAGAAAG+AGG | - | chr5.4:19849613-19849632 | None:intergenic | 45.0% | |
| GCACTCACACAATTCATCCT+AGG | - | chr5.4:19851023-19851042 | None:intergenic | 45.0% | |
| GCAGTGAAGGAACATTTGCA+GGG | - | chr5.4:19849622-19849641 | None:intergenic | 45.0% | |
| GCCTGACATCATGGAATCAT+GGG | + | chr5.4:19850488-19850507 | MS.gene35256:CDS | 45.0% | |
| GCTGAACCAAACATGTTTGG+AGG | + | chr5.4:19849803-19849822 | MS.gene35256:intron | 45.0% | |
| GTGCTCTGCTAGTCATGTAA+GGG | + | chr5.4:19851890-19851909 | MS.gene35256:intron | 45.0% | |
| GTTCAACTCTGTCATCATGC+AGG | + | chr5.4:19853299-19853318 | MS.gene35256:intron | 45.0% | |
| GTTGAAATGGCCTGACATCA+TGG | + | chr5.4:19850479-19850498 | MS.gene35256:CDS | 45.0% | |
| GTTTCACCACCTTCACTTGA+TGG | - | chr5.4:19853395-19853414 | None:intergenic | 45.0% | |
| TCCCATGATTCCATGATGTC+AGG | - | chr5.4:19850492-19850511 | None:intergenic | 45.0% | |
| TGTTTCCACCACAACTTACG+AGG | + | chr5.4:19849645-19849664 | MS.gene35256:CDS | 45.0% | |
| ! | CGTAAGTTGTGGTGGAAACA+GGG | - | chr5.4:19849645-19849664 | None:intergenic | 45.0% |
| ! | GCCACACTTTTAGCATAAGC+TGG | - | chr5.4:19852625-19852644 | None:intergenic | 45.0% |
| ! | GTAAGTTGTGGTGGAAACAG+GGG | - | chr5.4:19849644-19849663 | None:intergenic | 45.0% |
| ! | GTGGTTGGCCATGATAAAAG+TGG | + | chr5.4:19851356-19851375 | MS.gene35256:intron | 45.0% |
| ! | GTTGTTCTGGTTGTGAGGTT+TGG | - | chr5.4:19849505-19849524 | None:intergenic | 45.0% |
| ! | TCGTAAGTTGTGGTGGAAAC+AGG | - | chr5.4:19849646-19849665 | None:intergenic | 45.0% |
| ! | TGAGTGTTGTTCTGGTTGTG+AGG | - | chr5.4:19849510-19849529 | None:intergenic | 45.0% |
| ! | TTCACTTGATGGATCCCAAC+CGG | - | chr5.4:19853384-19853403 | None:intergenic | 45.0% |
| ! | TTGTCACAGACTGAAGCATC+AGG | + | chr5.4:19851999-19852018 | MS.gene35256:CDS | 45.0% |
| !! | TGAATGGTTCTGATTTGGGC+AGG | + | chr5.4:19850406-19850425 | MS.gene35256:intron | 45.0% |
| !! | TGGTTTTTGGAGGGTTTTGG+AGG | + | chr5.4:19851408-19851427 | MS.gene35256:intron | 45.0% |
| !!! | GGTTTTTGGAGGGTTTTGGA+GGG | + | chr5.4:19851409-19851428 | MS.gene35256:intron | 45.0% |
| AAACATCAAACCCCCCGGTT+GGG | + | chr5.4:19853367-19853386 | MS.gene35256:CDS | 50.0% | |
| AGGAAGAAACCTGAGAGCAG+CGG | - | chr5.4:19849482-19849501 | None:intergenic | 50.0% | |
| AGGGCAGCAGTTGCAACATT+AGG | + | chr5.4:19851909-19851928 | MS.gene35256:CDS | 50.0% | |
| GATTGGGATGTCGTGGTGAT+TGG | + | chr5.4:19853342-19853361 | MS.gene35256:CDS | 50.0% | |
| GCAGCAGTTGCAACATTAGG+AGG | + | chr5.4:19851912-19851931 | MS.gene35256:CDS | 50.0% | |
| GGCAGTGAAGGAACATTTGC+AGG | - | chr5.4:19849623-19849642 | None:intergenic | 50.0% | |
| GGCCTGACATCATGGAATCA+TGG | + | chr5.4:19850487-19850506 | MS.gene35256:CDS | 50.0% | |
| GGGCTATTCCTTCCACCATA+GGG | + | chr5.4:19850900-19850919 | MS.gene35256:intron | 50.0% | |
| GGTTGGGATCCATCAAGTGA+AGG | + | chr5.4:19853383-19853402 | MS.gene35256:CDS | 50.0% | |
| TAAGATAAACCTCGGGGCCA+AGG | - | chr5.4:19851532-19851551 | None:intergenic | 50.0% | |
| TGAAGAACCTTGCAGCCCTA+TGG | - | chr5.4:19850918-19850937 | None:intergenic | 50.0% | |
| TGGGATCCATCAAGTGAAGG+TGG | + | chr5.4:19853386-19853405 | MS.gene35256:CDS | 50.0% | |
| TGGGCTATTCCTTCCACCAT+AGG | + | chr5.4:19850899-19850918 | MS.gene35256:intron | 50.0% | |
| TTGTGGGCATTTCGCCTTTG+TGG | + | chr5.4:19850382-19850401 | MS.gene35256:intron | 50.0% | |
| ! | CAAGCTCTTCAGCCACTTTC+TGG | - | chr5.4:19850590-19850609 | None:intergenic | 50.0% |
| ! | GTTCTGGTTGTGAGGTTTGG+AGG | - | chr5.4:19849502-19849521 | None:intergenic | 50.0% |
| ! | TCACTTGATGGATCCCAACC+GGG | - | chr5.4:19853383-19853402 | None:intergenic | 50.0% |
| !! | AAGAGCTTGCTACTGGTCTG+GGG | + | chr5.4:19850601-19850620 | MS.gene35256:CDS | 50.0% |
| !! | GAAGAGCTTGCTACTGGTCT+GGG | + | chr5.4:19850600-19850619 | MS.gene35256:CDS | 50.0% |
| !! | TGAAGAGCTTGCTACTGGTC+TGG | + | chr5.4:19850599-19850618 | MS.gene35256:CDS | 50.0% |
| !!! | ACTTTTGGGTTTCCGGGATG+GGG | - | chr5.4:19851338-19851357 | None:intergenic | 50.0% |
| !!! | CACTTTTGGGTTTCCGGGAT+GGG | - | chr5.4:19851339-19851358 | None:intergenic | 50.0% |
| !!! | CCAACCACTTTTGGGTTTCC+GGG | - | chr5.4:19851344-19851363 | None:intergenic | 50.0% |
| !!! | GCCAACCACTTTTGGGTTTC+CGG | - | chr5.4:19851345-19851364 | None:intergenic | 50.0% |
| ACTTGCAACCCTCGGAACCT+TGG | + | chr5.4:19851512-19851531 | MS.gene35256:intron | 55.0% | |
| AGAACCTTGCAGCCCTATGG+TGG | - | chr5.4:19850915-19850934 | None:intergenic | 55.0% | |
| CAAACATCAAACCCCCCGGT+TGG | + | chr5.4:19853366-19853385 | MS.gene35256:CDS | 55.0% | |
| CAACCGGGGGGTTTGATGTT+TGG | - | chr5.4:19853368-19853387 | None:intergenic | 55.0% | |
| CAAGAGGACAGTTCGGTTCC+AGG | - | chr5.4:19850003-19850022 | None:intergenic | 55.0% | |
| CCATCCCGGAAACCCAAAAG+TGG | + | chr5.4:19851337-19851356 | MS.gene35256:intron | 55.0% | |
| CCCGGAAACCCAAAAGTGGT+TGG | + | chr5.4:19851341-19851360 | MS.gene35256:intron | 55.0% | |
| GATTCAGGAGGCGAAGAGTG+TGG | + | chr5.4:19852182-19852201 | MS.gene35256:intron | 55.0% | |
| GGAAGAAACCTGAGAGCAGC+GGG | - | chr5.4:19849481-19849500 | None:intergenic | 55.0% | |
| GTGTGTTGGATGGGGGATTC+AGG | + | chr5.4:19852167-19852186 | MS.gene35256:intron | 55.0% | |
| GTTCCGAGGGTTGCAAGTCT+AGG | - | chr5.4:19851510-19851529 | None:intergenic | 55.0% | |
| TCAAAACGGTGTGGGTGGGT+GGG | + | chr5.4:19852240-19852259 | MS.gene35256:intron | 55.0% | |
| TGGCCAAACATCAAACCCCC+CGG | + | chr5.4:19853362-19853381 | MS.gene35256:CDS | 55.0% | |
| TGTTGGATGGGGGATTCAGG+AGG | + | chr5.4:19852170-19852189 | MS.gene35256:intron | 55.0% | |
| TTCAAAACGGTGTGGGTGGG+TGG | + | chr5.4:19852239-19852258 | MS.gene35256:intron | 55.0% | |
| ! | ACTTGATGGATCCCAACCGG+GGG | - | chr5.4:19853381-19853400 | None:intergenic | 55.0% |
| ! | ATTCCAGGGCTGCTTGCTGA+AGG | + | chr5.4:19851736-19851755 | MS.gene35256:intron | 55.0% |
| ! | CACTTGATGGATCCCAACCG+GGG | - | chr5.4:19853382-19853401 | None:intergenic | 55.0% |
| ! | GGTTCTGACTCAGTAGCCGA+AGG | + | chr5.4:19851757-19851776 | MS.gene35256:CDS | 55.0% |
| !! | GGAGGTAAACATGGTGCTGC+TGG | + | chr5.4:19851930-19851949 | MS.gene35256:CDS | 55.0% |
| !! | GTGGCTGAAGAGCTTGCTAC+TGG | + | chr5.4:19850594-19850613 | MS.gene35256:CDS | 55.0% |
| !!! | CCACTTTTGGGTTTCCGGGA+TGG | - | chr5.4:19851340-19851359 | None:intergenic | 55.0% |
| AAAACGGTGTGGGTGGGTGG+GGG | + | chr5.4:19852242-19852261 | MS.gene35256:intron | 60.0% | |
| AAACCTGAGAGCAGCGGGAG+TGG | - | chr5.4:19849476-19849495 | None:intergenic | 60.0% | |
| CAAAACGGTGTGGGTGGGTG+GGG | + | chr5.4:19852241-19852260 | MS.gene35256:intron | 60.0% | |
| CCTTCCACCATAGGGCTGCA+AGG | + | chr5.4:19850908-19850927 | MS.gene35256:intron | 60.0% | |
| GAACCTTCAGCAAGCAGCCC+TGG | - | chr5.4:19851742-19851761 | None:intergenic | 60.0% | |
| GGTGGAAACAGGGGCAGTGA+AGG | - | chr5.4:19849635-19849654 | None:intergenic | 60.0% | |
| TCATGGGAATCGCTCGCTGC+TGG | + | chr5.4:19850504-19850523 | MS.gene35256:CDS | 60.0% | |
| ! | CCTTGCAGCCCTATGGTGGA+AGG | - | chr5.4:19850911-19850930 | None:intergenic | 60.0% |
| ! | CTTGATGGATCCCAACCGGG+GGG | - | chr5.4:19853380-19853399 | None:intergenic | 60.0% |
| CTACCACTCCCGCTGCTCTC+AGG | + | chr5.4:19849470-19849489 | MS.gene35256:CDS | 65.0% | |
| CTGAGAGCAGCGGGAGTGGT+AGG | - | chr5.4:19849472-19849491 | None:intergenic | 65.0% | |
| ACCTCGGGGCCAAGGTTCCG+AGG | - | chr5.4:19851524-19851543 | None:intergenic | 70.0% | |
| CCTCGGGGCCAAGGTTCCGA+GGG | - | chr5.4:19851523-19851542 | None:intergenic | 70.0% | |
| CCCTCGGAACCTTGGCCCCG+AGG | + | chr5.4:19851520-19851539 | MS.gene35256:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 19849457 | 19853430 | 19849457 | ID=MS.gene35256 |
| chr5.4 | mRNA | 19849457 | 19853430 | 19849457 | ID=MS.gene35256.t1;Parent=MS.gene35256 |
| chr5.4 | exon | 19849457 | 19849666 | 19849457 | ID=MS.gene35256.t1.exon1;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19849457 | 19849666 | 19849457 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19850145 | 19850335 | 19850145 | ID=MS.gene35256.t1.exon2;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19850145 | 19850335 | 19850145 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19850428 | 19850622 | 19850428 | ID=MS.gene35256.t1.exon3;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19850428 | 19850622 | 19850428 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19850794 | 19850855 | 19850794 | ID=MS.gene35256.t1.exon4;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19850794 | 19850855 | 19850794 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19851743 | 19851809 | 19851743 | ID=MS.gene35256.t1.exon5;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19851743 | 19851809 | 19851743 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19851902 | 19852020 | 19851902 | ID=MS.gene35256.t1.exon6;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19851902 | 19852020 | 19851902 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19852524 | 19852700 | 19852524 | ID=MS.gene35256.t1.exon7;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19852524 | 19852700 | 19852524 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| chr5.4 | exon | 19853321 | 19853430 | 19853321 | ID=MS.gene35256.t1.exon8;Parent=MS.gene35256.t1 |
| chr5.4 | CDS | 19853321 | 19853430 | 19853321 | ID=cds.MS.gene35256.t1;Parent=MS.gene35256.t1 |
| Gene Sequence |
| Protein sequence |
