Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37573.t1 | XP_003617201.1 | 96.7 | 423 | 12 | 1 | 1 | 423 | 1 | 421 | 8.00E-221 | 776.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37573.t1 | P25011 | 53.7 | 454 | 171 | 10 | 1 | 422 | 1 | 447 | 8.3e-110 | 398.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37573.t1 | G7KCT9 | 96.7 | 423 | 12 | 1 | 1 | 423 | 1 | 421 | 5.7e-221 | 776.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene37573 | 0.800309 | 1.53E-48 | -1.69E-46 |
| MS.gene049596 | MS.gene37573 | 0.828245 | 1.00E-54 | -1.69E-46 |
| MS.gene049622 | MS.gene37573 | 0.810986 | 8.77E-51 | -1.69E-46 |
| MS.gene04985 | MS.gene37573 | 0.836737 | 7.85E-57 | -1.69E-46 |
| MS.gene049989 | MS.gene37573 | 0.897607 | 1.19E-76 | -1.69E-46 |
| MS.gene050297 | MS.gene37573 | 0.887289 | 1.63E-72 | -1.69E-46 |
| MS.gene050310 | MS.gene37573 | 0.806693 | 7.27E-50 | -1.69E-46 |
| MS.gene050648 | MS.gene37573 | 0.833447 | 5.31E-56 | -1.69E-46 |
| MS.gene051094 | MS.gene37573 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene05124 | MS.gene37573 | 0.822306 | 2.54E-53 | -1.69E-46 |
| MS.gene051263 | MS.gene37573 | 0.8577 | 1.37E-62 | -1.69E-46 |
| MS.gene051478 | MS.gene37573 | 0.829786 | 4.24E-55 | -1.69E-46 |
| MS.gene051629 | MS.gene37573 | 0.847646 | 1.01E-59 | -1.69E-46 |
| MS.gene051816 | MS.gene37573 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene051955 | MS.gene37573 | 0.85455 | 1.14E-61 | -1.69E-46 |
| MS.gene052143 | MS.gene37573 | 0.855304 | 6.90E-62 | -1.69E-46 |
| MS.gene052308 | MS.gene37573 | 0.826704 | 2.34E-54 | -1.69E-46 |
| MS.gene052367 | MS.gene37573 | 0.878793 | 2.11E-69 | -1.69E-46 |
| MS.gene053173 | MS.gene37573 | 0.861055 | 1.34E-63 | -1.69E-46 |
| MS.gene053348 | MS.gene37573 | 0.847543 | 1.08E-59 | -1.69E-46 |
| MS.gene053416 | MS.gene37573 | 0.875889 | 2.16E-68 | -1.69E-46 |
| MS.gene053417 | MS.gene37573 | 0.876604 | 1.22E-68 | -1.69E-46 |
| MS.gene05369 | MS.gene37573 | 0.817522 | 3.16E-52 | -1.69E-46 |
| MS.gene053929 | MS.gene37573 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene37573 | 0.871873 | 4.91E-67 | -1.69E-46 |
| MS.gene054593 | MS.gene37573 | 0.835505 | 1.61E-56 | -1.69E-46 |
| MS.gene054614 | MS.gene37573 | 0.81308 | 3.07E-51 | -1.69E-46 |
| MS.gene054643 | MS.gene37573 | 0.864209 | 1.43E-64 | -1.69E-46 |
| MS.gene055308 | MS.gene37573 | 0.855348 | 6.70E-62 | -1.69E-46 |
| MS.gene055411 | MS.gene37573 | 0.831512 | 1.60E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene37573 | 0.845419 | 4.11E-59 | -1.69E-46 |
| MS.gene055579 | MS.gene37573 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene055957 | MS.gene37573 | 0.892421 | 1.61E-74 | -1.69E-46 |
| MS.gene056041 | MS.gene37573 | 0.889021 | 3.52E-73 | -1.69E-46 |
| MS.gene056042 | MS.gene37573 | 0.872984 | 2.09E-67 | -1.69E-46 |
| MS.gene056335 | MS.gene37573 | 0.829224 | 5.80E-55 | -1.69E-46 |
| MS.gene05640 | MS.gene37573 | 0.831136 | 1.98E-55 | -1.69E-46 |
| MS.gene056526 | MS.gene37573 | 0.850773 | 1.37E-60 | -1.69E-46 |
| MS.gene056528 | MS.gene37573 | 0.813921 | 2.00E-51 | -1.69E-46 |
| MS.gene057367 | MS.gene37573 | 0.802489 | 5.47E-49 | -1.69E-46 |
| MS.gene057458 | MS.gene37573 | 0.833677 | 4.65E-56 | -1.69E-46 |
| MS.gene057483 | MS.gene37573 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene058128 | MS.gene37573 | 0.825049 | 5.79E-54 | -1.69E-46 |
| MS.gene058196 | MS.gene37573 | 0.842171 | 3.04E-58 | -1.69E-46 |
| MS.gene058197 | MS.gene37573 | 0.857253 | 1.85E-62 | -1.69E-46 |
| MS.gene058198 | MS.gene37573 | 0.85867 | 7.02E-63 | -1.69E-46 |
| MS.gene058818 | MS.gene37573 | 0.846465 | 2.14E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene37573 | 0.804431 | 2.17E-49 | -1.69E-46 |
| MS.gene058844 | MS.gene37573 | 0.835658 | 1.48E-56 | -1.69E-46 |
| MS.gene058853 | MS.gene37573 | 0.835365 | 1.75E-56 | -1.69E-46 |
| MS.gene059300 | MS.gene37573 | 0.882451 | 1.03E-70 | -1.69E-46 |
| MS.gene059553 | MS.gene37573 | 0.83908 | 1.96E-57 | -1.69E-46 |
| MS.gene060473 | MS.gene37573 | 0.876287 | 1.57E-68 | -1.69E-46 |
| MS.gene060565 | MS.gene37573 | 0.871744 | 5.41E-67 | -1.69E-46 |
| MS.gene06057 | MS.gene37573 | 0.895434 | 9.62E-76 | -1.69E-46 |
| MS.gene06093 | MS.gene37573 | 0.833541 | 5.03E-56 | -1.69E-46 |
| MS.gene061099 | MS.gene37573 | 0.873848 | 1.07E-67 | -1.69E-46 |
| MS.gene061260 | MS.gene37573 | 0.866636 | 2.47E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37573.t1 | MTR_5g088980 | 96.690 | 423 | 12 | 1 | 1 | 423 | 1 | 421 | 0.0 | 842 |
| MS.gene37573.t1 | MTR_7g089080 | 52.597 | 462 | 169 | 12 | 1 | 419 | 1 | 455 | 8.97e-142 | 437 |
| MS.gene37573.t1 | MTR_5g023790 | 45.652 | 276 | 147 | 3 | 145 | 419 | 150 | 423 | 3.63e-77 | 246 |
| MS.gene37573.t1 | MTR_8g074000 | 38.338 | 373 | 207 | 7 | 45 | 416 | 74 | 424 | 9.55e-77 | 245 |
| MS.gene37573.t1 | MTR_5g023790 | 48.485 | 231 | 116 | 3 | 147 | 376 | 152 | 380 | 6.53e-68 | 221 |
| MS.gene37573.t1 | MTR_3g061680 | 45.200 | 250 | 129 | 3 | 160 | 404 | 15 | 261 | 9.39e-65 | 209 |
| MS.gene37573.t1 | MTR_3g060400 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 6.10e-64 | 207 |
| MS.gene37573.t1 | MTR_3g460990 | 44.048 | 252 | 133 | 3 | 165 | 411 | 26 | 274 | 6.10e-64 | 207 |
| MS.gene37573.t1 | MTR_3g060770 | 43.200 | 250 | 134 | 3 | 160 | 404 | 25 | 271 | 2.55e-62 | 203 |
| MS.gene37573.t1 | MTR_3g060820 | 44.898 | 245 | 127 | 4 | 165 | 404 | 20 | 261 | 2.67e-61 | 200 |
| MS.gene37573.t1 | MTR_3g088415 | 43.726 | 263 | 137 | 7 | 148 | 402 | 222 | 481 | 3.80e-61 | 206 |
| MS.gene37573.t1 | MTR_1g011470 | 41.860 | 258 | 142 | 5 | 165 | 415 | 159 | 415 | 4.73e-58 | 196 |
| MS.gene37573.t1 | MTR_3g107970 | 41.797 | 256 | 141 | 5 | 167 | 415 | 213 | 467 | 6.50e-57 | 194 |
| MS.gene37573.t1 | MTR_3g060410 | 44.889 | 225 | 119 | 2 | 194 | 413 | 131 | 355 | 6.69e-56 | 189 |
| MS.gene37573.t1 | MTR_6g045270 | 45.020 | 251 | 122 | 6 | 166 | 411 | 45 | 284 | 4.24e-54 | 182 |
| MS.gene37573.t1 | MTR_2g102550 | 40.441 | 272 | 153 | 6 | 150 | 414 | 151 | 420 | 1.56e-53 | 184 |
| MS.gene37573.t1 | MTR_3g088415 | 45.794 | 214 | 108 | 5 | 148 | 355 | 222 | 433 | 2.34e-53 | 184 |
| MS.gene37573.t1 | MTR_2g102520 | 32.754 | 403 | 232 | 14 | 7 | 377 | 36 | 431 | 2.39e-53 | 185 |
| MS.gene37573.t1 | MTR_3g088405 | 38.783 | 263 | 145 | 8 | 152 | 401 | 229 | 488 | 1.94e-52 | 183 |
| MS.gene37573.t1 | MTR_5g023790 | 52.121 | 165 | 78 | 1 | 147 | 310 | 152 | 316 | 5.93e-52 | 178 |
| MS.gene37573.t1 | MTR_1g018680 | 38.039 | 255 | 145 | 7 | 158 | 402 | 83 | 334 | 9.39e-48 | 167 |
| MS.gene37573.t1 | MTR_3g102520 | 35.433 | 254 | 154 | 4 | 158 | 402 | 82 | 334 | 1.12e-45 | 162 |
| MS.gene37573.t1 | MTR_3g102510 | 35.391 | 243 | 149 | 5 | 167 | 402 | 74 | 315 | 3.22e-44 | 157 |
| MS.gene37573.t1 | MTR_3g088415 | 48.485 | 165 | 82 | 3 | 148 | 310 | 222 | 385 | 6.10e-43 | 155 |
| MS.gene37573.t1 | MTR_3g102530 | 36.614 | 254 | 149 | 5 | 159 | 402 | 76 | 327 | 7.36e-43 | 154 |
| MS.gene37573.t1 | MTR_3g102560 | 40.654 | 214 | 123 | 4 | 186 | 397 | 86 | 297 | 2.62e-41 | 149 |
| MS.gene37573.t1 | MTR_3g102540 | 34.118 | 255 | 162 | 4 | 171 | 421 | 13 | 265 | 1.42e-35 | 132 |
| MS.gene37573.t1 | MTR_5g011900 | 39.344 | 183 | 106 | 2 | 154 | 333 | 60 | 240 | 7.42e-33 | 124 |
| MS.gene37573.t1 | MTR_5g044040 | 72.000 | 75 | 21 | 0 | 222 | 296 | 9 | 83 | 8.30e-32 | 117 |
| MS.gene37573.t1 | MTR_2g005960 | 35.156 | 128 | 68 | 4 | 146 | 258 | 101 | 228 | 2.20e-17 | 81.3 |
| MS.gene37573.t1 | MTR_1g032850 | 34.591 | 159 | 97 | 6 | 197 | 351 | 370 | 525 | 1.06e-13 | 73.2 |
| MS.gene37573.t1 | MTR_3g100710 | 28.906 | 128 | 85 | 3 | 193 | 315 | 91 | 217 | 7.72e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37573.t1 | AT5G06150 | 52.752 | 436 | 189 | 8 | 1 | 421 | 1 | 434 | 5.14e-142 | 413 |
| MS.gene37573.t1 | AT2G26760 | 50.831 | 421 | 168 | 7 | 1 | 420 | 1 | 383 | 8.82e-138 | 400 |
| MS.gene37573.t1 | AT3G11520 | 51.020 | 441 | 170 | 15 | 1 | 423 | 1 | 413 | 9.41e-133 | 388 |
| MS.gene37573.t1 | AT4G37490 | 50.231 | 432 | 190 | 9 | 1 | 419 | 2 | 421 | 5.73e-125 | 369 |
| MS.gene37573.t1 | AT3G11520 | 50.510 | 392 | 152 | 12 | 1 | 376 | 1 | 366 | 9.00e-115 | 341 |
| MS.gene37573.t1 | AT5G06150 | 50.595 | 336 | 142 | 8 | 1 | 317 | 1 | 331 | 6.77e-91 | 278 |
| MS.gene37573.t1 | AT1G20610 | 41.618 | 346 | 189 | 5 | 80 | 419 | 90 | 428 | 4.40e-82 | 259 |
| MS.gene37573.t1 | AT1G76310 | 45.818 | 275 | 145 | 4 | 147 | 419 | 157 | 429 | 3.92e-77 | 246 |
| MS.gene37573.t1 | AT1G16330 | 40.203 | 296 | 169 | 5 | 128 | 419 | 355 | 646 | 1.65e-76 | 250 |
| MS.gene37573.t1 | AT1G76310 | 41.584 | 303 | 145 | 5 | 147 | 419 | 157 | 457 | 8.62e-71 | 230 |
| MS.gene37573.t1 | AT2G17620 | 46.263 | 281 | 148 | 3 | 144 | 423 | 148 | 426 | 4.04e-69 | 225 |
| MS.gene37573.t1 | AT1G76310 | 49.138 | 232 | 114 | 4 | 147 | 376 | 157 | 386 | 1.71e-68 | 222 |
| MS.gene37573.t1 | AT4G35620 | 49.027 | 257 | 128 | 3 | 150 | 405 | 155 | 409 | 7.54e-68 | 222 |
| MS.gene37573.t1 | AT1G44110 | 43.182 | 264 | 139 | 7 | 147 | 402 | 175 | 435 | 7.83e-64 | 212 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.21e-61 | 207 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.21e-61 | 207 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.21e-61 | 207 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.21e-61 | 207 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 2.26e-61 | 206 |
| MS.gene37573.t1 | AT1G34460 | 41.896 | 327 | 142 | 8 | 1 | 317 | 113 | 401 | 3.08e-61 | 206 |
| MS.gene37573.t1 | AT1G34460 | 42.997 | 307 | 126 | 8 | 20 | 317 | 121 | 387 | 1.60e-60 | 204 |
| MS.gene37573.t1 | AT4G35620 | 51.316 | 228 | 108 | 3 | 150 | 376 | 155 | 380 | 2.00e-60 | 201 |
| MS.gene37573.t1 | AT1G34460 | 42.202 | 327 | 138 | 9 | 1 | 317 | 113 | 398 | 3.77e-60 | 203 |
| MS.gene37573.t1 | AT1G34460 | 42.202 | 327 | 138 | 9 | 1 | 317 | 113 | 398 | 3.77e-60 | 203 |
| MS.gene37573.t1 | AT1G77390 | 41.603 | 262 | 140 | 8 | 150 | 402 | 162 | 419 | 4.14e-57 | 194 |
| MS.gene37573.t1 | AT5G25380 | 46.083 | 217 | 111 | 3 | 191 | 402 | 199 | 414 | 5.16e-57 | 193 |
| MS.gene37573.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 199 | 426 | 6.72e-57 | 193 |
| MS.gene37573.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 199 | 426 | 6.72e-57 | 193 |
| MS.gene37573.t1 | AT5G25380 | 44.978 | 229 | 120 | 3 | 191 | 414 | 205 | 432 | 9.42e-57 | 193 |
| MS.gene37573.t1 | AT5G11300 | 40.780 | 282 | 158 | 6 | 148 | 421 | 152 | 432 | 1.03e-55 | 190 |
| MS.gene37573.t1 | AT1G80370 | 43.777 | 233 | 122 | 7 | 152 | 377 | 183 | 413 | 1.29e-52 | 182 |
| MS.gene37573.t1 | AT1G76310 | 52.023 | 173 | 80 | 3 | 147 | 317 | 157 | 328 | 2.83e-52 | 179 |
| MS.gene37573.t1 | AT5G43080 | 37.546 | 269 | 160 | 7 | 149 | 413 | 70 | 334 | 2.12e-50 | 174 |
| MS.gene37573.t1 | AT1G15570 | 37.545 | 277 | 164 | 6 | 152 | 421 | 174 | 448 | 3.88e-50 | 176 |
| MS.gene37573.t1 | AT1G47220 | 39.544 | 263 | 142 | 8 | 152 | 402 | 42 | 299 | 2.10e-49 | 171 |
| MS.gene37573.t1 | AT5G11300 | 44.954 | 218 | 112 | 5 | 148 | 358 | 152 | 368 | 5.22e-49 | 172 |
| MS.gene37573.t1 | AT5G43080 | 36.630 | 273 | 162 | 7 | 149 | 413 | 70 | 339 | 6.99e-49 | 170 |
| MS.gene37573.t1 | AT1G47210 | 36.765 | 272 | 159 | 7 | 152 | 413 | 88 | 356 | 1.65e-47 | 167 |
| MS.gene37573.t1 | AT1G47230 | 39.574 | 235 | 133 | 5 | 186 | 413 | 117 | 349 | 8.88e-47 | 165 |
| MS.gene37573.t1 | AT1G20590 | 44.767 | 172 | 93 | 2 | 226 | 397 | 65 | 234 | 2.91e-46 | 160 |
| MS.gene37573.t1 | AT1G47230 | 39.407 | 236 | 133 | 6 | 186 | 413 | 117 | 350 | 4.53e-45 | 160 |
| MS.gene37573.t1 | AT1G47210 | 42.453 | 106 | 56 | 3 | 152 | 253 | 88 | 192 | 4.00e-19 | 85.5 |
| MS.gene37573.t1 | AT1G70210 | 27.982 | 218 | 131 | 7 | 185 | 383 | 66 | 276 | 4.91e-15 | 76.3 |
| MS.gene37573.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 3.44e-11 | 65.5 |
| MS.gene37573.t1 | AT1G14750 | 26.702 | 191 | 133 | 5 | 197 | 383 | 385 | 572 | 4.82e-11 | 65.1 |
Find 82 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTACTCCTTATGTCTTTC+TGG | 0.055058 | 5.4:-70078453 | MS.gene37573:CDS |
| CTGGGTTGATCACAAGATTT+TGG | 0.152837 | 5.4:+70079743 | None:intergenic |
| ACAAGCTGAAGTTCCTTTCT+AGG | 0.205889 | 5.4:+70078739 | None:intergenic |
| AGAGTCAGATAGAAAGTTTC+TGG | 0.213074 | 5.4:+70078799 | None:intergenic |
| TGAGAATAAGCAAAAGAATA+TGG | 0.258137 | 5.4:-70079803 | MS.gene37573:CDS |
| CATCCAAGTATGAAGAGATT+TGG | 0.283042 | 5.4:-70078693 | MS.gene37573:CDS |
| GCATGTTCCACCCTTGTTGC+AGG | 0.310814 | 5.4:+70079406 | None:intergenic |
| CTCATCTTAGCATTTATATC+TGG | 0.312904 | 5.4:+70078874 | None:intergenic |
| GAAAACTATCTTGAGAAATC+TGG | 0.320459 | 5.4:-70078492 | MS.gene37573:CDS |
| TAGAGAACAGGTTCTGGTTA+TGG | 0.323287 | 5.4:-70078516 | MS.gene37573:CDS |
| GTCAATGTAGATGGAAAATA+TGG | 0.326088 | 5.4:-70078288 | MS.gene37573:intron |
| CTTTCTAGGTACAGCCTTTG+TGG | 0.334259 | 5.4:+70078753 | None:intergenic |
| CTCCTTATGTCTTTCTGGTT+CGG | 0.340595 | 5.4:-70078448 | MS.gene37573:CDS |
| TTCAGAGTATCAGTCCAAAA+AGG | 0.345889 | 5.4:+70078152 | None:intergenic |
| ATGAAAGCTCACCATGAGTT+TGG | 0.368616 | 5.4:+70077985 | None:intergenic |
| CAAATGTACCTTGTTCTTCT+CGG | 0.392731 | 5.4:+70079549 | None:intergenic |
| ATCCAAGTATGAAGAGATTT+GGG | 0.401159 | 5.4:-70078692 | MS.gene37573:CDS |
| AATGTTCTCAACCAATTCCT+TGG | 0.401763 | 5.4:+70079106 | None:intergenic |
| TAGAGTTGTGCCCAAGGAAT+TGG | 0.412967 | 5.4:-70079117 | MS.gene37573:CDS |
| GAGAATAAGCAAAAGAATAT+GGG | 0.431647 | 5.4:-70079802 | MS.gene37573:CDS |
| GTGATCAACCCAGCAGATCT+TGG | 0.435107 | 5.4:-70079733 | MS.gene37573:CDS |
| CCAGCACCTTGTGAGGCGTT+TGG | 0.435541 | 5.4:+70079693 | None:intergenic |
| TACCTTGTTCTTCTCGGCTG+CGG | 0.437360 | 5.4:+70079555 | None:intergenic |
| GCATTAGCACCAAGATCTGC+TGG | 0.439323 | 5.4:+70079724 | None:intergenic |
| TCCACCCTTGTTGCAGGAGC+AGG | 0.439437 | 5.4:+70079412 | None:intergenic |
| TGCCCAAATCTCTTCATACT+TGG | 0.450835 | 5.4:+70078690 | None:intergenic |
| GCAGAAGCAGCGATCATTGA+AGG | 0.453580 | 5.4:+70078209 | None:intergenic |
| AAGGAGAAACAAGCTGTTAG+AGG | 0.454934 | 5.4:-70079322 | MS.gene37573:CDS |
| CAATGCATATATTAGAGAAC+AGG | 0.455302 | 5.4:-70078528 | MS.gene37573:CDS |
| AATTGTCAAGACCTTTAGTT+CGG | 0.458770 | 5.4:-70079269 | MS.gene37573:CDS |
| AGCTGAAAGCACCGAACTAA+AGG | 0.461925 | 5.4:+70079258 | None:intergenic |
| ATCTGATAAGGATAATGAAT+TGG | 0.467651 | 5.4:-70079078 | MS.gene37573:CDS |
| TGTTCCTGCTCCTGCAACAA+GGG | 0.467937 | 5.4:-70079416 | MS.gene37573:CDS |
| GAACATTGATGTATCTGATA+AGG | 0.468799 | 5.4:-70079090 | MS.gene37573:CDS |
| CTGCTCCAGAGAGCAGGCTA+AGG | 0.473888 | 5.4:-70077958 | MS.gene37573:CDS |
| ATGTTCTCAACCAATTCCTT+GGG | 0.477458 | 5.4:+70079107 | None:intergenic |
| ATTGCCCTTAGCCTGCTCTC+TGG | 0.478232 | 5.4:+70077953 | None:intergenic |
| CAGCCTTTGTGGACAAGAAT+CGG | 0.484227 | 5.4:+70078764 | None:intergenic |
| AGAAAGGAACTTCAGCTTGT+TGG | 0.485403 | 5.4:-70078736 | MS.gene37573:CDS |
| TGAGAGCAATTCTTATTGAC+TGG | 0.486519 | 5.4:-70078855 | MS.gene37573:CDS |
| TGTTCGTGTGCATGATTACA+TGG | 0.488876 | 5.4:-70078905 | MS.gene37573:CDS |
| ACAATAACTTCAGGTTCTGC+AGG | 0.490279 | 5.4:+70079376 | None:intergenic |
| CACAAAGGCTGTACCTAGAA+AGG | 0.495888 | 5.4:-70078752 | MS.gene37573:CDS |
| ATTCTGCTGCTCCAGAGAGC+AGG | 0.501013 | 5.4:-70077964 | MS.gene37573:CDS |
| TTGTTGCAGGGCTCAGTTAG+CGG | 0.512442 | 5.4:-70079590 | MS.gene37573:intron |
| GAGCTGATGACAATAACTTC+AGG | 0.520645 | 5.4:+70079367 | None:intergenic |
| GAGAAAACAAACCTCTGGGT+TGG | 0.526369 | 5.4:+70080442 | None:intergenic |
| ATATATTAGAGAACAGGTTC+TGG | 0.541725 | 5.4:-70078522 | MS.gene37573:CDS |
| CTATCTTGAGAAATCTGGAA+TGG | 0.549489 | 5.4:-70078487 | MS.gene37573:CDS |
| TTGTTCCTGCTCCTGCAACA+AGG | 0.551530 | 5.4:-70079417 | MS.gene37573:CDS |
| TACCGAACCAGAAAGACATA+AGG | 0.554202 | 5.4:+70078446 | None:intergenic |
| TATGTTACCTCTTTGTCAGA+GGG | 0.556774 | 5.4:+70078407 | None:intergenic |
| AGAATAAGCAAAAGAATATG+GGG | 0.564634 | 5.4:-70079801 | MS.gene37573:CDS |
| CAGCTCTGATGAAGAATCTG+AGG | 0.565331 | 5.4:-70079350 | MS.gene37573:CDS |
| CGCTGCTTCTGCTGTATACG+CGG | 0.571832 | 5.4:-70078198 | MS.gene37573:CDS |
| TGTTACCTCTTTGTCAGAGG+GGG | 0.575120 | 5.4:+70078409 | None:intergenic |
| GTATGTTACCTCTTTGTCAG+AGG | 0.576005 | 5.4:+70078406 | None:intergenic |
| TGAAGAGATTTGGGCACCAG+AGG | 0.576486 | 5.4:-70078683 | MS.gene37573:intron |
| TGCTTGTAGAGTTGTGCCCA+AGG | 0.577586 | 5.4:-70079123 | MS.gene37573:CDS |
| TGAAGAATCTGAGGAAGTGA+AGG | 0.582635 | 5.4:-70079341 | MS.gene37573:CDS |
| TCCTGCTCCTGCAACAAGGG+TGG | 0.587370 | 5.4:-70079413 | MS.gene37573:CDS |
| CAGAAGCAGCGATCATTGAA+GGG | 0.593935 | 5.4:+70078210 | None:intergenic |
| TGCTCCAGAGAGCAGGCTAA+GGG | 0.599044 | 5.4:-70077957 | MS.gene37573:CDS |
| CGGCAAGATCAACCCTTGAG+AGG | 0.604646 | 5.4:-70078178 | MS.gene37573:CDS |
| CATTAGCACCAAGATCTGCT+GGG | 0.606851 | 5.4:+70079725 | None:intergenic |
| TATCAAACCAGCACCTTGTG+AGG | 0.610247 | 5.4:+70079686 | None:intergenic |
| GCTACTCTGAGGAACAACTA+AGG | 0.611407 | 5.4:-70078118 | MS.gene37573:intron |
| CAGGGATTGTGCCAAACTCA+TGG | 0.623770 | 5.4:-70077996 | MS.gene37573:CDS |
| GGTGCTTTCAGCTAGAAGCA+AGG | 0.623928 | 5.4:-70079248 | MS.gene37573:intron |
| GCATCATAGAAAGTTCAGCT+AGG | 0.624531 | 5.4:+70078258 | None:intergenic |
| ATGTCACCAAACGCCTCACA+AGG | 0.630342 | 5.4:-70079699 | MS.gene37573:intron |
| AGCCGCAGCCGAGAAGAACA+AGG | 0.634015 | 5.4:-70079557 | MS.gene37573:intron |
| TGACCGATTCTTGTCCACAA+AGG | 0.641766 | 5.4:-70078767 | MS.gene37573:CDS |
| GATACTCTGAAGCACTACAC+AGG | 0.643296 | 5.4:-70078140 | MS.gene37573:CDS |
| ATGTTACCTCTTTGTCAGAG+GGG | 0.656596 | 5.4:+70078408 | None:intergenic |
| ACTGGTTGATTGAAGTGCAT+AGG | 0.656956 | 5.4:-70078837 | MS.gene37573:CDS |
| GTTCGTGTGCATGATTACAT+GGG | 0.685299 | 5.4:-70078904 | MS.gene37573:CDS |
| GATCATTGAAGGGCAGTACG+AGG | 0.686811 | 5.4:+70078220 | None:intergenic |
| GAATAAGCAAAAGAATATGG+GGG | 0.692143 | 5.4:-70079800 | MS.gene37573:CDS |
| ACCAGAAAGACATAAGGAGT+AGG | 0.696020 | 5.4:+70078452 | None:intergenic |
| GCACTACACAGGCTACTCTG+AGG | 0.714283 | 5.4:-70078129 | MS.gene37573:CDS |
| ACCGAACAAAACCAACCCAG+AGG | 0.746551 | 5.4:-70080453 | MS.gene37573:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAGTAATTTTAGTTAAT+AGG | - | chr5.4:70077993-70078012 | MS.gene37573:CDS | 10.0% |
| !!! | TAGTTTTTATTAAGTATTTA+TGG | - | chr5.4:70078334-70078353 | MS.gene37573:intron | 10.0% |
| !!! | TTTAGTAATTTTAGTTAATA+GGG | - | chr5.4:70077994-70078013 | MS.gene37573:CDS | 10.0% |
| !! | ATAAACCGTATAAAAAATTA+AGG | + | chr5.4:70079705-70079724 | None:intergenic | 15.0% |
| !! | TAAACCGTATAAAAAATTAA+GGG | + | chr5.4:70079704-70079723 | None:intergenic | 15.0% |
| !! | TGAAACAATAATATGTTATA+TGG | - | chr5.4:70079740-70079759 | MS.gene37573:CDS | 15.0% |
| !! | AAATTAAAAAGATAAGCATG+AGG | + | chr5.4:70078720-70078739 | None:intergenic | 20.0% |
| !! | ATTAACAAAAATCATAGATC+AGG | + | chr5.4:70078522-70078541 | None:intergenic | 20.0% |
| !! | ATTACTTTATAGTTTGATTG+TGG | - | chr5.4:70079971-70079990 | MS.gene37573:intron | 20.0% |
| !! | CAACATAAACAAATAAAATC+AGG | + | chr5.4:70078744-70078763 | None:intergenic | 20.0% |
| !! | TGTTCACTGTTTAAATTAAA+TGG | - | chr5.4:70078091-70078110 | MS.gene37573:intron | 20.0% |
| !! | TTTGTTTATTTATGTTGTCA+GGG | - | chr5.4:70080340-70080359 | MS.gene37573:intron | 20.0% |
| !!! | AACTCCCTTAATTTTTTATA+CGG | - | chr5.4:70079697-70079716 | MS.gene37573:intron | 20.0% |
| !!! | ATTTGATTTCTGTAAAGTTT+TGG | - | chr5.4:70078231-70078250 | MS.gene37573:CDS | 20.0% |
| !!! | ATTTGGTAATTTTGGTTATT+AGG | - | chr5.4:70078204-70078223 | MS.gene37573:CDS | 20.0% |
| !!! | TATTAGTCTACATTGAAAAA+TGG | + | chr5.4:70079179-70079198 | None:intergenic | 20.0% |
| !!! | TCTTTTAATCTTGTGAAATA+TGG | - | chr5.4:70079135-70079154 | MS.gene37573:intron | 20.0% |
| !!! | TGATCTATGATTTTTGTTAA+TGG | - | chr5.4:70078521-70078540 | MS.gene37573:CDS | 20.0% |
| !!! | TGATTTTTGTTAATGGAATT+AGG | - | chr5.4:70078528-70078547 | MS.gene37573:CDS | 20.0% |
| !!! | TTTGGTAATTTTGGTTATTA+GGG | - | chr5.4:70078205-70078224 | MS.gene37573:CDS | 20.0% |
| !!! | TTTTGTTTATTTATGTTGTC+AGG | - | chr5.4:70080339-70080358 | MS.gene37573:intron | 20.0% |
| ! | AGAATAAGCAAAAGAATATG+GGG | - | chr5.4:70078553-70078572 | MS.gene37573:CDS | 25.0% |
| ! | ATCTGATAAGGATAATGAAT+TGG | - | chr5.4:70079276-70079295 | MS.gene37573:CDS | 25.0% |
| ! | GAGAATAAGCAAAAGAATAT+GGG | - | chr5.4:70078552-70078571 | MS.gene37573:CDS | 25.0% |
| ! | TATTTGTTCAGTGTGTAAAT+GGG | - | chr5.4:70078426-70078445 | MS.gene37573:CDS | 25.0% |
| ! | TGAGAATAAGCAAAAGAATA+TGG | - | chr5.4:70078551-70078570 | MS.gene37573:CDS | 25.0% |
| ! | TTATTTGTTCAGTGTGTAAA+TGG | - | chr5.4:70078425-70078444 | MS.gene37573:CDS | 25.0% |
| ! | TTTATTTCATTTGTGTGTAC+AGG | - | chr5.4:70079778-70079797 | MS.gene37573:CDS | 25.0% |
| ! | TTTCGAGATACAATGTATTA+AGG | + | chr5.4:70078880-70078899 | None:intergenic | 25.0% |
| !! | GATTTGATTCTGAAAAATTG+AGG | - | chr5.4:70077960-70077979 | MS.gene37573:CDS | 25.0% |
| !!! | TATCTCGAAATTTGTTTTGA+TGG | - | chr5.4:70078890-70078909 | MS.gene37573:CDS | 25.0% |
| !!! | TTTTCTGAGATGAAATATGA+GGG | - | chr5.4:70078302-70078321 | MS.gene37573:intron | 25.0% |
| AAAAGAGAAAACAAACCTCT+GGG | + | chr5.4:70077919-70077938 | None:intergenic | 30.0% | |
| AATATGGTTTATGTGACTTG+TGG | - | chr5.4:70079151-70079170 | MS.gene37573:intron | 30.0% | |
| AATTGTCAAGACCTTTAGTT+CGG | - | chr5.4:70079085-70079104 | MS.gene37573:CDS | 30.0% | |
| ATATATTAGAGAACAGGTTC+TGG | - | chr5.4:70079832-70079851 | MS.gene37573:intron | 30.0% | |
| ATCCAAGTATGAAGAGATTT+GGG | - | chr5.4:70079662-70079681 | MS.gene37573:intron | 30.0% | |
| CAATGCATATATTAGAGAAC+AGG | - | chr5.4:70079826-70079845 | MS.gene37573:intron | 30.0% | |
| CTCATCTTAGCATTTATATC+TGG | + | chr5.4:70079483-70079502 | None:intergenic | 30.0% | |
| GAAAACTATCTTGAGAAATC+TGG | - | chr5.4:70079862-70079881 | MS.gene37573:intron | 30.0% | |
| GAACATTGATGTATCTGATA+AGG | - | chr5.4:70079264-70079283 | MS.gene37573:CDS | 30.0% | |
| GAATAAGCAAAAGAATATGG+GGG | - | chr5.4:70078554-70078573 | MS.gene37573:CDS | 30.0% | |
| GTCAATGTAGATGGAAAATA+TGG | - | chr5.4:70080066-70080085 | MS.gene37573:intron | 30.0% | |
| TCTGAAAAATTGAGGATTGA+AGG | - | chr5.4:70077968-70077987 | MS.gene37573:CDS | 30.0% | |
| ! | AAAGGTCTTGACAATTTTCT+TGG | + | chr5.4:70079081-70079100 | None:intergenic | 30.0% |
| ! | ATGAAATATGAGGGTGATTT+TGG | - | chr5.4:70078188-70078207 | MS.gene37573:CDS | 30.0% |
| ! | CTACTTTGTTCCATTTTCAA+AGG | - | chr5.4:70078846-70078865 | MS.gene37573:CDS | 30.0% |
| ! | GAACATAATTTGTCAAACAC+AGG | - | chr5.4:70079207-70079226 | MS.gene37573:intron | 30.0% |
| ! | TCAAACTTTAGAAAACAACG+AGG | + | chr5.4:70078121-70078140 | None:intergenic | 30.0% |
| ! | TTGTTTATGTTGTTGTTGCA+GGG | - | chr5.4:70078752-70078771 | MS.gene37573:CDS | 30.0% |
| ! | TTTGTTTATGTTGTTGTTGC+AGG | - | chr5.4:70078751-70078770 | MS.gene37573:CDS | 30.0% |
| !! | AGATTCTGAAGACAAGTTTT+TGG | + | chr5.4:70080480-70080499 | None:intergenic | 30.0% |
| !! | GATTCTGAGATGAAATATGA+GGG | - | chr5.4:70078179-70078198 | MS.gene37573:CDS | 30.0% |
| !! | TGATTCTGAGATGAAATATG+AGG | - | chr5.4:70078178-70078197 | MS.gene37573:CDS | 30.0% |
| !!! | GTTTTCTGAGATGAAATATG+AGG | - | chr5.4:70078301-70078320 | MS.gene37573:intron | 30.0% |
| !!! | TCTGTTTTTGTCAATGTAGA+TGG | - | chr5.4:70080057-70080076 | MS.gene37573:intron | 30.0% |
| AATGTTCTCAACCAATTCCT+TGG | + | chr5.4:70079251-70079270 | None:intergenic | 35.0% | |
| ACAGAATCCACAATTAGACA+AGG | + | chr5.4:70080042-70080061 | None:intergenic | 35.0% | |
| AGAGTCAGATAGAAAGTTTC+TGG | + | chr5.4:70079558-70079577 | None:intergenic | 35.0% | |
| ATGTTCTCAACCAATTCCTT+GGG | + | chr5.4:70079250-70079269 | None:intergenic | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr5.4:70078808-70078827 | None:intergenic | 35.0% | |
| CATCCAAGTATGAAGAGATT+TGG | - | chr5.4:70079661-70079680 | MS.gene37573:intron | 35.0% | |
| CTATCTTGAGAAATCTGGAA+TGG | - | chr5.4:70079867-70079886 | MS.gene37573:intron | 35.0% | |
| GAAAAGAGAAAACAAACCTC+TGG | + | chr5.4:70077920-70077939 | None:intergenic | 35.0% | |
| GATGAAATATGAGGGTGATT+TGG | - | chr5.4:70078187-70078206 | MS.gene37573:CDS | 35.0% | |
| TATGTTACCTCTTTGTCAGA+GGG | + | chr5.4:70079950-70079969 | None:intergenic | 35.0% | |
| TGAGAGCAATTCTTATTGAC+TGG | - | chr5.4:70079499-70079518 | MS.gene37573:intron | 35.0% | |
| TTAGTGTTTACGTGATTCTC+TGG | - | chr5.4:70078474-70078493 | MS.gene37573:CDS | 35.0% | |
| TTGACTTTGATGAATGACAC+AGG | - | chr5.4:70079422-70079441 | MS.gene37573:CDS | 35.0% | |
| ! | GGAAACACAACCTTTGAAAA+TGG | + | chr5.4:70078859-70078878 | None:intergenic | 35.0% |
| ! | TCAGAGTATCAGTCCAAAAA+GGG | + | chr5.4:70080204-70080223 | None:intergenic | 35.0% |
| ! | TTCAGAGTATCAGTCCAAAA+AGG | + | chr5.4:70080205-70080224 | None:intergenic | 35.0% |
| !!! | TGAGGGTGATTTGGTAATTT+TGG | - | chr5.4:70078196-70078215 | MS.gene37573:CDS | 35.0% |
| AAGGAGAAACAAGCTGTTAG+AGG | - | chr5.4:70079032-70079051 | MS.gene37573:CDS | 40.0% | |
| AATTAAGGGAGTTCTACCTC+TGG | + | chr5.4:70079690-70079709 | None:intergenic | 40.0% | |
| ACAAGCTGAAGTTCCTTTCT+AGG | + | chr5.4:70079618-70079637 | None:intergenic | 40.0% | |
| ACCAGAAAGACATAAGGAGT+AGG | + | chr5.4:70079905-70079924 | None:intergenic | 40.0% | |
| ACTGGTTGATTGAAGTGCAT+AGG | - | chr5.4:70079517-70079536 | MS.gene37573:intron | 40.0% | |
| AGAAAGGAACTTCAGCTTGT+TGG | - | chr5.4:70079618-70079637 | MS.gene37573:intron | 40.0% | |
| ATGAAAGCTCACCATGAGTT+TGG | + | chr5.4:70080372-70080391 | None:intergenic | 40.0% | |
| ATGTTACCTCTTTGTCAGAG+GGG | + | chr5.4:70079949-70079968 | None:intergenic | 40.0% | |
| CAAAAGAATATGGGGGTTGA+AGG | - | chr5.4:70078561-70078580 | MS.gene37573:intron | 40.0% | |
| GAGCTGATGACAATAACTTC+AGG | + | chr5.4:70078990-70079009 | None:intergenic | 40.0% | |
| GCATCATAGAAAGTTCAGCT+AGG | + | chr5.4:70080099-70080118 | None:intergenic | 40.0% | |
| GTATGTTACCTCTTTGTCAG+AGG | + | chr5.4:70079951-70079970 | None:intergenic | 40.0% | |
| GTTCGTGTGCATGATTACAT+GGG | - | chr5.4:70079450-70079469 | MS.gene37573:intron | 40.0% | |
| TACCGAACCAGAAAGACATA+AGG | + | chr5.4:70079911-70079930 | None:intergenic | 40.0% | |
| TCCTACTCCTTATGTCTTTC+TGG | - | chr5.4:70079901-70079920 | MS.gene37573:intron | 40.0% | |
| TGAAGAATCTGAGGAAGTGA+AGG | - | chr5.4:70079013-70079032 | MS.gene37573:intron | 40.0% | |
| TGATGCAATGTGGAATGGAA+CGG | - | chr5.4:70080016-70080035 | MS.gene37573:intron | 40.0% | |
| TGCCCAAATCTCTTCATACT+TGG | + | chr5.4:70079667-70079686 | None:intergenic | 40.0% | |
| TGTTCGTGTGCATGATTACA+TGG | - | chr5.4:70079449-70079468 | MS.gene37573:intron | 40.0% | |
| ! | ACAATAACTTCAGGTTCTGC+AGG | + | chr5.4:70078981-70079000 | None:intergenic | 40.0% |
| ! | GGTCTTGACAATTTTCTTGG+TGG | + | chr5.4:70079078-70079097 | None:intergenic | 40.0% |
| ! | TAGAGAACAGGTTCTGGTTA+TGG | - | chr5.4:70079838-70079857 | MS.gene37573:intron | 40.0% |
| !! | CTCCTTATGTCTTTCTGGTT+CGG | - | chr5.4:70079906-70079925 | MS.gene37573:intron | 40.0% |
| !!! | CTGGGTTGATCACAAGATTT+TGG | + | chr5.4:70078614-70078633 | None:intergenic | 40.0% |
| !!! | TCTGAAGACAAGTTTTTGGC+TGG | + | chr5.4:70080476-70080495 | None:intergenic | 40.0% |
| CACAAAGGCTGTACCTAGAA+AGG | - | chr5.4:70079602-70079621 | MS.gene37573:intron | 45.0% | |
| CAGAAGCAGCGATCATTGAA+GGG | + | chr5.4:70080147-70080166 | None:intergenic | 45.0% | |
| CAGCCTTTGTGGACAAGAAT+CGG | + | chr5.4:70079593-70079612 | None:intergenic | 45.0% | |
| CAGTGTGTAAATGGGTCTGA+GGG | - | chr5.4:70078434-70078453 | MS.gene37573:CDS | 45.0% | |
| CATTAGCACCAAGATCTGCT+GGG | + | chr5.4:70078632-70078651 | None:intergenic | 45.0% | |
| CTTTCTAGGTACAGCCTTTG+TGG | + | chr5.4:70079604-70079623 | None:intergenic | 45.0% | |
| GAGAAAACAAACCTCTGGGT+TGG | + | chr5.4:70077915-70077934 | None:intergenic | 45.0% | |
| GTCATGTGACTGATGCAATG+TGG | - | chr5.4:70080006-70080025 | MS.gene37573:intron | 45.0% | |
| GTGACTGATGCAATGTGGAA+TGG | - | chr5.4:70080011-70080030 | MS.gene37573:intron | 45.0% | |
| TAGAGTTGTGCCCAAGGAAT+TGG | - | chr5.4:70079237-70079256 | MS.gene37573:intron | 45.0% | |
| TATCAAACCAGCACCTTGTG+AGG | + | chr5.4:70078671-70078690 | None:intergenic | 45.0% | |
| TCAGTGTGTAAATGGGTCTG+AGG | - | chr5.4:70078433-70078452 | MS.gene37573:CDS | 45.0% | |
| TGTTACCTCTTTGTCAGAGG+GGG | + | chr5.4:70079948-70079967 | None:intergenic | 45.0% | |
| ! | CAGCTCTGATGAAGAATCTG+AGG | - | chr5.4:70079004-70079023 | MS.gene37573:intron | 45.0% |
| ! | GCTACTCTGAGGAACAACTA+AGG | - | chr5.4:70080236-70080255 | MS.gene37573:intron | 45.0% |
| ! | TGACCGATTCTTGTCCACAA+AGG | - | chr5.4:70079587-70079606 | MS.gene37573:intron | 45.0% |
| !! | AGCTGAAAGCACCGAACTAA+AGG | + | chr5.4:70079099-70079118 | None:intergenic | 45.0% |
| !! | GATACTCTGAAGCACTACAC+AGG | - | chr5.4:70080214-70080233 | MS.gene37573:intron | 45.0% |
| !!! | ACCTCTGGGTTGGTTTTGTT+CGG | + | chr5.4:70077905-70077924 | None:intergenic | 45.0% |
| ACCGAACAAAACCAACCCAG+AGG | - | chr5.4:70077901-70077920 | MS.gene37573:CDS | 50.0% | |
| ATGTCACCAAACGCCTCACA+AGG | - | chr5.4:70078655-70078674 | MS.gene37573:intron | 50.0% | |
| CAGGGATTGTGCCAAACTCA+TGG | - | chr5.4:70080358-70080377 | MS.gene37573:intron | 50.0% | |
| CCAAAAAGGGCTCCTCTCAA+GGG | + | chr5.4:70080191-70080210 | None:intergenic | 50.0% | |
| GATCATTGAAGGGCAGTACG+AGG | + | chr5.4:70080137-70080156 | None:intergenic | 50.0% | |
| GCAGAAGCAGCGATCATTGA+AGG | + | chr5.4:70080148-70080167 | None:intergenic | 50.0% | |
| GCATTAGCACCAAGATCTGC+TGG | + | chr5.4:70078633-70078652 | None:intergenic | 50.0% | |
| GGTGCTTTCAGCTAGAAGCA+AGG | - | chr5.4:70079106-70079125 | MS.gene37573:CDS | 50.0% | |
| GTGATCAACCCAGCAGATCT+TGG | - | chr5.4:70078621-70078640 | MS.gene37573:intron | 50.0% | |
| TACCTTGTTCTTCTCGGCTG+CGG | + | chr5.4:70078802-70078821 | None:intergenic | 50.0% | |
| TCCAAAAAGGGCTCCTCTCA+AGG | + | chr5.4:70080192-70080211 | None:intergenic | 50.0% | |
| TGAAGAGATTTGGGCACCAG+AGG | - | chr5.4:70079671-70079690 | MS.gene37573:intron | 50.0% | |
| TGCTTGTAGAGTTGTGCCCA+AGG | - | chr5.4:70079231-70079250 | MS.gene37573:intron | 50.0% | |
| TGTGTAAATGGGTCTGAGGG+TGG | - | chr5.4:70078437-70078456 | MS.gene37573:CDS | 50.0% | |
| TGTTCCTGCTCCTGCAACAA+GGG | - | chr5.4:70078938-70078957 | MS.gene37573:intron | 50.0% | |
| TTGTTCCTGCTCCTGCAACA+AGG | - | chr5.4:70078937-70078956 | MS.gene37573:intron | 50.0% | |
| TTGTTGCAGGGCTCAGTTAG+CGG | - | chr5.4:70078764-70078783 | MS.gene37573:CDS | 50.0% | |
| ! | GGAACGGCCTTGTCTAATTG+TGG | - | chr5.4:70080032-70080051 | MS.gene37573:intron | 50.0% |
| !!! | CTGGGTTGGTTTTGTTCGGT+AGG | + | chr5.4:70077901-70077920 | None:intergenic | 50.0% |
| ATTCTGCTGCTCCAGAGAGC+AGG | - | chr5.4:70080390-70080409 | MS.gene37573:intron | 55.0% | |
| ATTGCCCTTAGCCTGCTCTC+TGG | + | chr5.4:70080404-70080423 | None:intergenic | 55.0% | |
| CGCTGCTTCTGCTGTATACG+CGG | - | chr5.4:70080156-70080175 | MS.gene37573:intron | 55.0% | |
| CGGCAAGATCAACCCTTGAG+AGG | - | chr5.4:70080176-70080195 | MS.gene37573:intron | 55.0% | |
| GCACTACACAGGCTACTCTG+AGG | - | chr5.4:70080225-70080244 | MS.gene37573:intron | 55.0% | |
| GCATGTTCCACCCTTGTTGC+AGG | + | chr5.4:70078951-70078970 | None:intergenic | 55.0% | |
| TACCTCTTTGTCAGAGGGGG+TGG | + | chr5.4:70079945-70079964 | None:intergenic | 55.0% | |
| TGCTCCAGAGAGCAGGCTAA+GGG | - | chr5.4:70080397-70080416 | MS.gene37573:intron | 55.0% | |
| ! | CCCTTGAGAGGAGCCCTTTT+TGG | - | chr5.4:70080188-70080207 | MS.gene37573:intron | 55.0% |
| AGCCGCAGCCGAGAAGAACA+AGG | - | chr5.4:70078797-70078816 | MS.gene37573:CDS | 60.0% | |
| CCAAACGCCTCACAAGGTGC+TGG | - | chr5.4:70078661-70078680 | MS.gene37573:intron | 60.0% | |
| CTCCACCCCCTCTGACAAAG+AGG | - | chr5.4:70079940-70079959 | MS.gene37573:intron | 60.0% | |
| CTCTTTGTCAGAGGGGGTGG+AGG | + | chr5.4:70079942-70079961 | None:intergenic | 60.0% | |
| CTGCTCCAGAGAGCAGGCTA+AGG | - | chr5.4:70080396-70080415 | MS.gene37573:intron | 60.0% | |
| TCCACCCTTGTTGCAGGAGC+AGG | + | chr5.4:70078945-70078964 | None:intergenic | 60.0% | |
| TCCTGCTCCTGCAACAAGGG+TGG | - | chr5.4:70078941-70078960 | MS.gene37573:intron | 60.0% | |
| ! | CCAGCACCTTGTGAGGCGTT+TGG | + | chr5.4:70078664-70078683 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 70077874 | 70080502 | 70077874 | ID=MS.gene37573 |
| chr5.4 | mRNA | 70077874 | 70080502 | 70077874 | ID=MS.gene37573.t1;Parent=MS.gene37573 |
| chr5.4 | exon | 70080454 | 70080502 | 70080454 | ID=MS.gene37573.t1.exon1;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70080454 | 70080502 | 70080454 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70079700 | 70079826 | 70079700 | ID=MS.gene37573.t1.exon2;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70079700 | 70079826 | 70079700 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70079558 | 70079603 | 70079558 | ID=MS.gene37573.t1.exon3;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70079558 | 70079603 | 70079558 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70079249 | 70079443 | 70079249 | ID=MS.gene37573.t1.exon4;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70079249 | 70079443 | 70079249 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70079028 | 70079147 | 70079028 | ID=MS.gene37573.t1.exon5;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70079028 | 70079147 | 70079028 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70078684 | 70078932 | 70078684 | ID=MS.gene37573.t1.exon6;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70078684 | 70078932 | 70078684 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70078415 | 70078576 | 70078415 | ID=MS.gene37573.t1.exon7;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70078415 | 70078576 | 70078415 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70078119 | 70078300 | 70078119 | ID=MS.gene37573.t1.exon8;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70078119 | 70078300 | 70078119 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| chr5.4 | exon | 70077874 | 70078015 | 70077874 | ID=MS.gene37573.t1.exon9;Parent=MS.gene37573.t1 |
| chr5.4 | CDS | 70077874 | 70078015 | 70077874 | ID=cds.MS.gene37573.t1;Parent=MS.gene37573.t1 |
| Gene Sequence |
| Protein sequence |
