Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37653.t1 | XP_003604300.2 | 80.2 | 353 | 43 | 2 | 1 | 328 | 1 | 351 | 1.00E-138 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37653.t1 | Q9T072 | 44.0 | 182 | 100 | 2 | 144 | 325 | 145 | 324 | 6.0e-31 | 136.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37653.t1 | G7JFN8 | 80.2 | 353 | 43 | 2 | 1 | 328 | 1 | 351 | 7.4e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37653.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene37653 | 0.849387 | 3.34E-60 | -1.69E-46 |
| MS.gene049166 | MS.gene37653 | 0.818542 | 1.86E-52 | -1.69E-46 |
| MS.gene049178 | MS.gene37653 | 0.845134 | 4.91E-59 | -1.69E-46 |
| MS.gene04917 | MS.gene37653 | 0.844764 | 6.18E-59 | -1.69E-46 |
| MS.gene049208 | MS.gene37653 | 0.822855 | 1.89E-53 | -1.69E-46 |
| MS.gene049756 | MS.gene37653 | 0.808795 | 2.60E-50 | -1.69E-46 |
| MS.gene049786 | MS.gene37653 | 0.824027 | 1.01E-53 | -1.69E-46 |
| MS.gene049822 | MS.gene37653 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene04984 | MS.gene37653 | 0.826838 | 2.18E-54 | -1.69E-46 |
| MS.gene04991 | MS.gene37653 | -0.822642 | 2.12E-53 | -1.69E-46 |
| MS.gene050114 | MS.gene37653 | 0.86977 | 2.41E-66 | -1.69E-46 |
| MS.gene050317 | MS.gene37653 | 0.862358 | 5.36E-64 | -1.69E-46 |
| MS.gene050439 | MS.gene37653 | 0.802033 | 6.80E-49 | -1.69E-46 |
| MS.gene050527 | MS.gene37653 | 0.815884 | 7.36E-52 | -1.69E-46 |
| MS.gene050629 | MS.gene37653 | -0.827084 | 1.90E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene37653 | 0.826783 | 2.24E-54 | -1.69E-46 |
| MS.gene050763 | MS.gene37653 | 0.827699 | 1.35E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene37653 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene051245 | MS.gene37653 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene051748 | MS.gene37653 | 0.817236 | 3.66E-52 | -1.69E-46 |
| MS.gene051756 | MS.gene37653 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene37653 | 0.84312 | 1.70E-58 | -1.69E-46 |
| MS.gene053109 | MS.gene37653 | 0.818004 | 2.46E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene37653 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene053381 | MS.gene37653 | 0.837662 | 4.56E-57 | -1.69E-46 |
| MS.gene05344 | MS.gene37653 | -0.802655 | 5.06E-49 | -1.69E-46 |
| MS.gene05380 | MS.gene37653 | 0.812359 | 4.41E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene37653 | 0.810464 | 1.14E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene37653 | 0.854994 | 8.49E-62 | -1.69E-46 |
| MS.gene055313 | MS.gene37653 | 0.832893 | 7.29E-56 | -1.69E-46 |
| MS.gene055314 | MS.gene37653 | 0.844378 | 7.85E-59 | -1.69E-46 |
| MS.gene055441 | MS.gene37653 | 0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene055603 | MS.gene37653 | 0.808315 | 3.29E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene37653 | 0.827707 | 1.35E-54 | -1.69E-46 |
| MS.gene056552 | MS.gene37653 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene056752 | MS.gene37653 | 0.838632 | 2.56E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene37653 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene056849 | MS.gene37653 | 0.808898 | 2.47E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene37653 | 0.804857 | 1.77E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene37653 | 0.806572 | 7.71E-50 | -1.69E-46 |
| MS.gene057234 | MS.gene37653 | 0.802195 | 6.29E-49 | -1.69E-46 |
| MS.gene057451 | MS.gene37653 | -0.828673 | 7.89E-55 | -1.69E-46 |
| MS.gene057452 | MS.gene37653 | -0.859252 | 4.70E-63 | -1.69E-46 |
| MS.gene058182 | MS.gene37653 | 0.818124 | 2.31E-52 | -1.69E-46 |
| MS.gene058638 | MS.gene37653 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene058639 | MS.gene37653 | 0.831456 | 1.65E-55 | -1.69E-46 |
| MS.gene058646 | MS.gene37653 | 0.815856 | 7.46E-52 | -1.69E-46 |
| MS.gene058654 | MS.gene37653 | 0.845099 | 5.02E-59 | -1.69E-46 |
| MS.gene058758 | MS.gene37653 | 0.833973 | 3.92E-56 | -1.69E-46 |
| MS.gene059171 | MS.gene37653 | 0.841122 | 5.75E-58 | -1.69E-46 |
| MS.gene059719 | MS.gene37653 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene37653 | 0.828458 | 8.89E-55 | -1.69E-46 |
| MS.gene06010 | MS.gene37653 | 0.863696 | 2.07E-64 | -1.69E-46 |
| MS.gene06011 | MS.gene37653 | 0.842261 | 2.88E-58 | -1.69E-46 |
| MS.gene060296 | MS.gene37653 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene060297 | MS.gene37653 | 0.806553 | 7.78E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene37653 | 0.983253 | 3.05E-157 | -1.69E-46 |
| MS.gene060870 | MS.gene37653 | 0.94282 | 3.64E-102 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37653.t1 | MTR_4g009110 | 80.453 | 353 | 42 | 3 | 1 | 328 | 1 | 351 | 0.0 | 526 |
| MS.gene37653.t1 | MTR_4g009540 | 72.493 | 349 | 56 | 6 | 1 | 327 | 1 | 331 | 7.91e-161 | 452 |
| MS.gene37653.t1 | MTR_4g009540 | 71.341 | 328 | 54 | 6 | 1 | 306 | 1 | 310 | 2.35e-147 | 417 |
| MS.gene37653.t1 | MTR_2g104550 | 46.707 | 334 | 147 | 6 | 1 | 326 | 1 | 311 | 4.84e-84 | 256 |
| MS.gene37653.t1 | MTR_2g104490 | 46.707 | 334 | 141 | 9 | 1 | 325 | 1 | 306 | 2.02e-79 | 245 |
| MS.gene37653.t1 | MTR_2g104490 | 45.079 | 315 | 136 | 9 | 1 | 306 | 1 | 287 | 2.47e-68 | 216 |
| MS.gene37653.t1 | MTR_2g104500 | 39.365 | 315 | 143 | 11 | 17 | 327 | 2 | 272 | 1.85e-56 | 184 |
| MS.gene37653.t1 | MTR_8g009020 | 45.200 | 250 | 114 | 3 | 91 | 327 | 84 | 323 | 2.55e-56 | 186 |
| MS.gene37653.t1 | MTR_8g009010 | 37.117 | 326 | 120 | 8 | 24 | 324 | 4 | 269 | 1.13e-50 | 171 |
| MS.gene37653.t1 | MTR_2g104530 | 41.870 | 246 | 123 | 5 | 92 | 331 | 47 | 278 | 1.71e-50 | 169 |
| MS.gene37653.t1 | MTR_2g104560 | 46.875 | 192 | 87 | 4 | 141 | 327 | 44 | 225 | 3.53e-48 | 162 |
| MS.gene37653.t1 | MTR_5g014520 | 43.404 | 235 | 124 | 3 | 96 | 327 | 102 | 330 | 2.82e-47 | 162 |
| MS.gene37653.t1 | MTR_7g080780 | 33.898 | 354 | 182 | 10 | 1 | 327 | 1 | 329 | 1.38e-46 | 160 |
| MS.gene37653.t1 | MTR_0246s0020 | 42.412 | 257 | 120 | 8 | 96 | 327 | 122 | 375 | 1.98e-46 | 162 |
| MS.gene37653.t1 | MTR_0250s0040 | 46.667 | 180 | 87 | 5 | 151 | 327 | 88 | 261 | 3.11e-46 | 158 |
| MS.gene37653.t1 | MTR_7g080780 | 33.531 | 337 | 174 | 9 | 18 | 327 | 3 | 316 | 2.50e-44 | 154 |
| MS.gene37653.t1 | MTR_5g014600 | 37.736 | 265 | 136 | 6 | 85 | 326 | 76 | 334 | 4.20e-44 | 154 |
| MS.gene37653.t1 | MTR_8g069740 | 37.415 | 294 | 143 | 12 | 25 | 308 | 6 | 268 | 1.16e-43 | 151 |
| MS.gene37653.t1 | MTR_4g066460 | 39.224 | 232 | 123 | 5 | 100 | 327 | 108 | 325 | 9.74e-43 | 150 |
| MS.gene37653.t1 | MTR_4g097940 | 47.541 | 183 | 89 | 4 | 144 | 325 | 148 | 324 | 3.17e-42 | 149 |
| MS.gene37653.t1 | MTR_4g067010 | 42.347 | 196 | 103 | 3 | 134 | 327 | 130 | 317 | 4.17e-42 | 149 |
| MS.gene37653.t1 | MTR_0246s0020 | 42.570 | 249 | 113 | 9 | 96 | 317 | 122 | 367 | 5.45e-42 | 149 |
| MS.gene37653.t1 | MTR_6g047570 | 36.800 | 250 | 139 | 4 | 82 | 327 | 98 | 332 | 7.16e-42 | 148 |
| MS.gene37653.t1 | MTR_5g014560 | 45.506 | 178 | 92 | 2 | 151 | 327 | 131 | 304 | 3.36e-41 | 146 |
| MS.gene37653.t1 | MTR_0011s0260 | 38.866 | 247 | 141 | 5 | 87 | 327 | 114 | 356 | 3.44e-41 | 147 |
| MS.gene37653.t1 | MTR_5g014640 | 32.609 | 322 | 183 | 8 | 28 | 326 | 13 | 323 | 3.52e-40 | 144 |
| MS.gene37653.t1 | MTR_4g097920 | 45.355 | 183 | 93 | 4 | 144 | 325 | 133 | 309 | 1.27e-39 | 142 |
| MS.gene37653.t1 | MTR_4g097920 | 45.355 | 183 | 93 | 4 | 144 | 325 | 148 | 324 | 1.72e-39 | 142 |
| MS.gene37653.t1 | MTR_0011s0210 | 38.057 | 247 | 143 | 5 | 87 | 327 | 114 | 356 | 2.93e-39 | 142 |
| MS.gene37653.t1 | MTR_0246s0050 | 37.190 | 242 | 125 | 6 | 90 | 327 | 99 | 317 | 3.81e-38 | 138 |
| MS.gene37653.t1 | MTR_2g010450 | 47.191 | 178 | 88 | 3 | 147 | 322 | 173 | 346 | 5.18e-38 | 139 |
| MS.gene37653.t1 | MTR_4g098035 | 37.037 | 243 | 126 | 6 | 89 | 327 | 119 | 338 | 5.18e-38 | 138 |
| MS.gene37653.t1 | MTR_4g066380 | 39.320 | 206 | 118 | 2 | 122 | 327 | 124 | 322 | 6.49e-38 | 138 |
| MS.gene37653.t1 | MTR_2g104650 | 34.314 | 306 | 150 | 12 | 25 | 324 | 6 | 266 | 6.52e-37 | 134 |
| MS.gene37653.t1 | MTR_4g092700 | 43.258 | 178 | 92 | 3 | 151 | 325 | 158 | 329 | 4.01e-36 | 133 |
| MS.gene37653.t1 | MTR_2g104590 | 41.398 | 186 | 86 | 4 | 140 | 324 | 58 | 221 | 5.05e-36 | 130 |
| MS.gene37653.t1 | MTR_4g097950 | 35.593 | 236 | 143 | 4 | 94 | 322 | 12 | 245 | 5.65e-35 | 128 |
| MS.gene37653.t1 | MTR_7g451650 | 40.000 | 185 | 93 | 4 | 141 | 322 | 23 | 192 | 2.20e-32 | 119 |
| MS.gene37653.t1 | MTR_4g009510 | 42.604 | 169 | 76 | 5 | 161 | 325 | 52 | 203 | 3.14e-31 | 117 |
| MS.gene37653.t1 | MTR_7g050350 | 42.361 | 144 | 66 | 3 | 181 | 322 | 2 | 130 | 1.29e-28 | 108 |
| MS.gene37653.t1 | MTR_7g451650 | 42.361 | 144 | 66 | 3 | 181 | 322 | 2 | 130 | 1.29e-28 | 108 |
| MS.gene37653.t1 | MTR_4g009420 | 40.123 | 162 | 75 | 3 | 161 | 322 | 53 | 192 | 3.25e-28 | 108 |
| MS.gene37653.t1 | MTR_7g451650 | 39.053 | 169 | 85 | 4 | 141 | 306 | 23 | 176 | 2.59e-26 | 103 |
| MS.gene37653.t1 | MTR_4g009420 | 39.041 | 146 | 67 | 3 | 161 | 306 | 53 | 176 | 8.38e-22 | 92.0 |
| MS.gene37653.t1 | MTR_8g067280 | 32.768 | 177 | 107 | 3 | 124 | 290 | 435 | 609 | 1.87e-18 | 86.7 |
| MS.gene37653.t1 | MTR_6g047550 | 37.762 | 143 | 67 | 4 | 82 | 217 | 112 | 239 | 1.41e-17 | 81.6 |
| MS.gene37653.t1 | MTR_5g014550 | 39.370 | 127 | 72 | 2 | 180 | 305 | 53 | 175 | 9.63e-17 | 77.8 |
| MS.gene37653.t1 | MTR_5g030430 | 28.750 | 160 | 106 | 2 | 139 | 290 | 481 | 640 | 1.38e-15 | 78.2 |
| MS.gene37653.t1 | MTR_8g024790 | 27.957 | 186 | 116 | 6 | 111 | 290 | 255 | 428 | 2.39e-15 | 77.0 |
| MS.gene37653.t1 | MTR_1g072320 | 25.758 | 198 | 130 | 5 | 142 | 325 | 458 | 652 | 3.48e-15 | 76.6 |
| MS.gene37653.t1 | MTR_8g024770 | 27.273 | 176 | 113 | 5 | 141 | 306 | 265 | 435 | 6.23e-14 | 72.8 |
| MS.gene37653.t1 | MTR_7g083900 | 26.596 | 188 | 118 | 4 | 152 | 326 | 287 | 467 | 9.84e-13 | 68.9 |
| MS.gene37653.t1 | MTR_8g027495 | 30.769 | 117 | 66 | 2 | 150 | 264 | 457 | 560 | 1.16e-12 | 68.9 |
| MS.gene37653.t1 | MTR_7g083900 | 26.064 | 188 | 118 | 4 | 152 | 326 | 287 | 466 | 2.15e-12 | 68.2 |
| MS.gene37653.t1 | MTR_0194s0050 | 23.830 | 235 | 128 | 8 | 120 | 325 | 166 | 378 | 3.11e-12 | 67.4 |
| MS.gene37653.t1 | MTR_8g098275 | 25.000 | 204 | 120 | 4 | 150 | 327 | 243 | 439 | 5.62e-12 | 66.6 |
| MS.gene37653.t1 | MTR_3g498695 | 27.815 | 151 | 100 | 3 | 141 | 283 | 288 | 437 | 8.39e-12 | 66.2 |
| MS.gene37653.t1 | MTR_3g498695 | 27.815 | 151 | 100 | 3 | 141 | 283 | 288 | 437 | 8.69e-12 | 66.2 |
| MS.gene37653.t1 | MTR_8g098275 | 25.000 | 204 | 120 | 4 | 150 | 327 | 400 | 596 | 8.77e-12 | 66.2 |
| MS.gene37653.t1 | MTR_8g098275 | 25.000 | 204 | 120 | 4 | 150 | 327 | 307 | 503 | 1.13e-11 | 65.9 |
| MS.gene37653.t1 | MTR_7g117670 | 30.435 | 115 | 69 | 2 | 150 | 264 | 401 | 504 | 1.69e-11 | 65.5 |
| MS.gene37653.t1 | MTR_5g030770 | 28.470 | 281 | 153 | 11 | 23 | 283 | 18 | 270 | 5.01e-11 | 63.2 |
| MS.gene37653.t1 | MTR_5g030770 | 28.470 | 281 | 159 | 11 | 23 | 283 | 18 | 276 | 8.69e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37653.t1 | AT4G37850 | 43.716 | 183 | 101 | 2 | 143 | 325 | 144 | 324 | 8.86e-41 | 145 |
| MS.gene37653.t1 | AT4G37850 | 43.716 | 183 | 101 | 2 | 143 | 325 | 144 | 324 | 8.86e-41 | 145 |
| MS.gene37653.t1 | AT2G22760 | 41.146 | 192 | 96 | 5 | 144 | 326 | 112 | 295 | 9.87e-36 | 131 |
| MS.gene37653.t1 | AT2G22770 | 38.249 | 217 | 111 | 5 | 130 | 325 | 104 | 318 | 3.15e-34 | 128 |
| MS.gene37653.t1 | AT2G22750 | 43.229 | 192 | 100 | 4 | 137 | 321 | 108 | 297 | 8.89e-34 | 126 |
| MS.gene37653.t1 | AT2G22750 | 43.229 | 192 | 100 | 4 | 137 | 321 | 132 | 321 | 1.08e-33 | 127 |
| MS.gene37653.t1 | AT2G22750 | 43.229 | 192 | 100 | 4 | 137 | 321 | 136 | 325 | 1.12e-33 | 127 |
| MS.gene37653.t1 | AT2G22760 | 43.275 | 171 | 81 | 4 | 144 | 306 | 112 | 274 | 5.74e-33 | 124 |
| MS.gene37653.t1 | AT2G22750 | 43.229 | 192 | 99 | 5 | 137 | 321 | 108 | 296 | 2.25e-32 | 122 |
| MS.gene37653.t1 | AT2G22750 | 43.229 | 192 | 99 | 5 | 137 | 321 | 136 | 324 | 2.89e-32 | 123 |
| MS.gene37653.t1 | AT5G46760 | 28.105 | 153 | 109 | 1 | 139 | 290 | 403 | 555 | 2.10e-15 | 77.4 |
| MS.gene37653.t1 | AT4G17880 | 29.936 | 157 | 97 | 3 | 139 | 290 | 404 | 552 | 3.05e-15 | 77.0 |
| MS.gene37653.t1 | AT1G63650 | 31.757 | 148 | 86 | 2 | 151 | 283 | 405 | 552 | 1.38e-14 | 75.1 |
| MS.gene37653.t1 | AT1G63650 | 31.757 | 148 | 86 | 2 | 151 | 283 | 405 | 552 | 1.38e-14 | 75.1 |
| MS.gene37653.t1 | AT1G63650 | 31.757 | 148 | 86 | 2 | 151 | 283 | 405 | 552 | 1.38e-14 | 75.1 |
| MS.gene37653.t1 | AT5G41315 | 30.719 | 153 | 86 | 4 | 151 | 283 | 441 | 593 | 1.12e-13 | 72.4 |
| MS.gene37653.t1 | AT5G41315 | 30.719 | 153 | 86 | 4 | 151 | 283 | 449 | 601 | 1.16e-13 | 72.4 |
| MS.gene37653.t1 | AT5G41315 | 30.719 | 153 | 86 | 4 | 151 | 283 | 446 | 598 | 1.20e-13 | 72.0 |
| MS.gene37653.t1 | AT1G32640 | 32.099 | 162 | 88 | 6 | 139 | 290 | 440 | 589 | 1.23e-13 | 72.0 |
| MS.gene37653.t1 | AT4G09820 | 25.926 | 189 | 115 | 4 | 138 | 326 | 350 | 513 | 1.24e-12 | 68.9 |
| MS.gene37653.t1 | AT3G61950 | 29.101 | 189 | 118 | 6 | 148 | 328 | 125 | 305 | 3.84e-12 | 66.6 |
| MS.gene37653.t1 | AT3G26744 | 29.189 | 185 | 116 | 5 | 110 | 283 | 266 | 446 | 4.11e-12 | 67.4 |
| MS.gene37653.t1 | AT3G61950 | 29.101 | 189 | 118 | 6 | 148 | 328 | 176 | 356 | 4.42e-12 | 66.6 |
| MS.gene37653.t1 | AT1G12860 | 30.714 | 140 | 84 | 3 | 152 | 283 | 268 | 402 | 4.70e-12 | 67.0 |
| MS.gene37653.t1 | AT1G12860 | 27.869 | 183 | 115 | 4 | 152 | 326 | 268 | 441 | 5.10e-12 | 67.0 |
| MS.gene37653.t1 | AT5G57150 | 27.848 | 158 | 108 | 3 | 143 | 294 | 47 | 204 | 5.46e-12 | 65.1 |
| MS.gene37653.t1 | AT2G46510 | 31.452 | 124 | 64 | 4 | 139 | 262 | 383 | 485 | 5.50e-12 | 67.0 |
| MS.gene37653.t1 | AT3G26744 | 29.189 | 185 | 116 | 5 | 110 | 283 | 266 | 446 | 5.56e-12 | 67.0 |
| MS.gene37653.t1 | AT3G26744 | 29.189 | 185 | 116 | 5 | 110 | 283 | 266 | 446 | 5.56e-12 | 67.0 |
| MS.gene37653.t1 | AT3G26744 | 29.189 | 185 | 116 | 5 | 110 | 283 | 266 | 446 | 5.56e-12 | 67.0 |
| MS.gene37653.t1 | AT5G57150 | 27.848 | 158 | 108 | 3 | 143 | 294 | 47 | 204 | 5.99e-12 | 64.7 |
| MS.gene37653.t1 | AT3G61950 | 33.793 | 145 | 81 | 5 | 148 | 285 | 125 | 261 | 6.29e-12 | 65.9 |
| MS.gene37653.t1 | AT5G57150 | 27.848 | 158 | 108 | 3 | 143 | 294 | 46 | 203 | 6.50e-12 | 64.7 |
| MS.gene37653.t1 | AT3G61950 | 33.793 | 145 | 81 | 5 | 148 | 285 | 176 | 312 | 9.67e-12 | 65.5 |
| MS.gene37653.t1 | AT5G57150 | 27.848 | 158 | 108 | 3 | 143 | 294 | 46 | 203 | 1.12e-11 | 64.3 |
| MS.gene37653.t1 | AT5G57150 | 27.848 | 158 | 108 | 3 | 143 | 294 | 47 | 204 | 1.12e-11 | 64.7 |
| MS.gene37653.t1 | AT1G01260 | 32.895 | 76 | 51 | 0 | 139 | 214 | 421 | 496 | 2.35e-11 | 65.1 |
| MS.gene37653.t1 | AT1G01260 | 32.895 | 76 | 51 | 0 | 139 | 214 | 421 | 496 | 2.35e-11 | 65.1 |
| MS.gene37653.t1 | AT1G01260 | 32.895 | 76 | 51 | 0 | 139 | 214 | 421 | 496 | 2.35e-11 | 65.1 |
| MS.gene37653.t1 | AT2G16910 | 22.801 | 307 | 165 | 9 | 38 | 293 | 190 | 475 | 2.51e-11 | 65.1 |
| MS.gene37653.t1 | AT5G46830 | 26.761 | 142 | 97 | 3 | 150 | 290 | 342 | 477 | 4.25e-11 | 64.3 |
Find 42 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAACATCAAAACTTTC+TGG | 0.157589 | 4.2:-90874823 | None:intergenic |
| CTTGTGTTAATTTGAGTTCT+AGG | 0.232838 | 4.2:+90875025 | MS.gene37653:CDS |
| ATGACTCTTGCTTCAATATC+TGG | 0.292442 | 4.2:-90877928 | None:intergenic |
| ATCCATTGTGAGAAACAAAA+TGG | 0.294137 | 4.2:+90877973 | MS.gene37653:CDS |
| GCACTTTCAGCTACTATTCC+TGG | 0.324686 | 4.2:+90875198 | MS.gene37653:CDS |
| AAAGACAAAATGTATGTCTT+TGG | 0.328953 | 4.2:-90874967 | None:intergenic |
| GGTAGCAGTGTCTTGCCATT+TGG | 0.333645 | 4.2:+90878048 | MS.gene37653:CDS |
| GTAGCAGTGTCTTGCCATTT+GGG | 0.353594 | 4.2:+90878049 | MS.gene37653:CDS |
| CAATATCTGGAAGGATACTA+TGG | 0.374591 | 4.2:-90877915 | None:intergenic |
| TCACTTTAGCATCTTCTTTG+AGG | 0.383325 | 4.2:-90878732 | None:intergenic |
| AGAAACAAGAAGAAAATGTT+GGG | 0.406463 | 4.2:+90877800 | MS.gene37653:CDS |
| GAAATAGTTGATTTCCCAAA+TGG | 0.414232 | 4.2:-90878063 | None:intergenic |
| AATCATCATCGTCAGTGTTA+AGG | 0.430939 | 4.2:-90874774 | None:intergenic |
| TTTCCCAATGACTCCTCCAT+TGG | 0.449389 | 4.2:-90874607 | None:intergenic |
| TTCCATCACTATAATTGCTC+GGG | 0.454181 | 4.2:+90878083 | MS.gene37653:CDS |
| TTTCCAATGGAGGAGTCATT+GGG | 0.455919 | 4.2:+90874604 | None:intergenic |
| TTTATATTGCAGATGGGAGA+TGG | 0.464639 | 4.2:+90878654 | MS.gene37653:intron |
| CAATTTACCTTGCTCAAGCC+AGG | 0.465848 | 4.2:-90875216 | None:intergenic |
| CTCAAATTAACACAAGGTTC+TGG | 0.471060 | 4.2:-90875018 | None:intergenic |
| ACAGTGTATTGATCATATAA+TGG | 0.475067 | 4.2:+90875134 | MS.gene37653:CDS |
| TGTTCTTGTTCTTGTTCTTG+TGG | 0.483186 | 4.2:-90874898 | None:intergenic |
| GAGAAACAAGAAGAAAATGT+TGG | 0.486811 | 4.2:+90877799 | MS.gene37653:CDS |
| TTTCCATCACTATAATTGCT+CGG | 0.489893 | 4.2:+90878082 | MS.gene37653:CDS |
| ATATAATGGCAGAGAGAAAA+CGG | 0.495978 | 4.2:+90875148 | MS.gene37653:CDS |
| AAAACTAATCAACAAATCAA+TGG | 0.499326 | 4.2:+90875087 | MS.gene37653:CDS |
| ACACAAGGTTCTGGTGTAGC+TGG | 0.499575 | 4.2:-90875009 | None:intergenic |
| GATATTGAAGCAAGAGTCAT+GGG | 0.509819 | 4.2:+90877931 | MS.gene37653:CDS |
| AATCTTCAACTGTTTGTCAC+TGG | 0.515596 | 4.2:+90878027 | MS.gene37653:CDS |
| CAAATCAATGGAGCTAAGAA+AGG | 0.524101 | 4.2:+90875099 | MS.gene37653:CDS |
| TACCCGAGCAATTATAGTGA+TGG | 0.541857 | 4.2:-90878085 | None:intergenic |
| TTATATTGCAGATGGGAGAT+GGG | 0.554862 | 4.2:+90878655 | MS.gene37653:intron |
| AGATATTGAAGCAAGAGTCA+TGG | 0.568127 | 4.2:+90877930 | MS.gene37653:CDS |
| TACTATTCCTGGCTTGAGCA+AGG | 0.585542 | 4.2:+90875209 | MS.gene37653:CDS |
| AAAGCTTCAATACTTCAAGC+AGG | 0.588462 | 4.2:+90877733 | MS.gene37653:CDS |
| AACAAATCACAAAATTCATG+TGG | 0.589942 | 4.2:+90877841 | MS.gene37653:CDS |
| CTCTTGCTTCAATATCTGGA+AGG | 0.599921 | 4.2:-90877924 | None:intergenic |
| CTAGAACTCAAATTAACACA+AGG | 0.614675 | 4.2:-90875024 | None:intergenic |
| GTGTTGTAGGAATTGGATTG+CGG | 0.620465 | 4.2:+90874721 | MS.gene37653:intron |
| TGAAGCAAGAGTCATGGGAA+AGG | 0.625639 | 4.2:+90877936 | MS.gene37653:CDS |
| CAAGAACAAGAACAACAACA+TGG | 0.670092 | 4.2:+90874907 | MS.gene37653:CDS |
| GAAACAAGAAGAAAATGTTG+GGG | 0.696078 | 4.2:+90877801 | MS.gene37653:CDS |
| TTTGGAGAAGAACCTTTACG+AGG | 0.704448 | 4.2:-90874949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAATATATATAAAAAAA+TGG | + | chr4.2:90875338-90875357 | MS.gene37653:intron | 0.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr4.2:90876426-90876445 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr4.2:90876427-90876446 | None:intergenic | 10.0% |
| !!! | TATTAAATAATTAGTTTCAT+CGG | + | chr4.2:90875275-90875294 | MS.gene37653:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | - | chr4.2:90877024-90877043 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | - | chr4.2:90877025-90877044 | None:intergenic | 10.0% |
| !! | AAAAAAAATTGATACAAAAG+AGG | - | chr4.2:90877667-90877686 | None:intergenic | 15.0% |
| !! | AAAAAAATTGATACAAAAGA+GGG | - | chr4.2:90877666-90877685 | None:intergenic | 15.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | + | chr4.2:90876462-90876481 | MS.gene37653:intron | 15.0% |
| !! | AATATTTCTTCAAATAACTA+AGG | - | chr4.2:90877481-90877500 | None:intergenic | 15.0% |
| !! | ACTAATTATTTAATATGAGA+TGG | - | chr4.2:90875270-90875289 | None:intergenic | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr4.2:90876425-90876444 | None:intergenic | 15.0% |
| !! | ATATTTCTTCAAATAACTAA+GGG | - | chr4.2:90877480-90877499 | None:intergenic | 15.0% |
| !! | ATTACTCAAAATTCTAATTT+AGG | - | chr4.2:90878452-90878471 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr4.2:90876362-90876381 | None:intergenic | 15.0% |
| !! | TCAACTAAATAAAAAATCTT+GGG | + | chr4.2:90876698-90876717 | MS.gene37653:intron | 15.0% |
| !! | TCTGATTAATAAAGAAATAA+AGG | + | chr4.2:90876830-90876849 | MS.gene37653:intron | 15.0% |
| !! | TGTAAATTAATAAATTTCTC+CGG | + | chr4.2:90877315-90877334 | MS.gene37653:intron | 15.0% |
| !! | TTCAACTAAATAAAAAATCT+TGG | + | chr4.2:90876697-90876716 | MS.gene37653:intron | 15.0% |
| !!! | AATGCATCTTTTTAAATTTT+TGG | - | chr4.2:90876524-90876543 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr4.2:90876948-90876967 | None:intergenic | 15.0% |
| !!! | ATTTTATTGATCAAAGATTA+GGG | - | chr4.2:90875909-90875928 | None:intergenic | 15.0% |
| !!! | TATTTTATTGATCAAAGATT+AGG | - | chr4.2:90875910-90875929 | None:intergenic | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | + | chr4.2:90876910-90876929 | MS.gene37653:intron | 15.0% |
| !! | AAAACTAATCAACAAATCAA+TGG | + | chr4.2:90875087-90875106 | MS.gene37653:CDS | 20.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | + | chr4.2:90876872-90876891 | MS.gene37653:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr4.2:90876402-90876421 | None:intergenic | 20.0% |
| !! | AATTATTTAATATGAGATGG+AGG | - | chr4.2:90875267-90875286 | None:intergenic | 20.0% |
| !! | ATATTACTTTATATTGCAGA+TGG | + | chr4.2:90878647-90878666 | MS.gene37653:intron | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | + | chr4.2:90876461-90876480 | MS.gene37653:intron | 20.0% |
| !! | CCTGACATTATTAATTTATA+GGG | + | chr4.2:90877339-90877358 | MS.gene37653:intron | 20.0% |
| !! | TAATACGATGAACTAAAATA+AGG | - | chr4.2:90877554-90877573 | None:intergenic | 20.0% |
| !! | TATTACTTTATATTGCAGAT+GGG | + | chr4.2:90878648-90878667 | MS.gene37653:intron | 20.0% |
| !! | TATTGTGTAGATTATTTGAA+AGG | - | chr4.2:90875780-90875799 | None:intergenic | 20.0% |
| !! | TCCTGACATTATTAATTTAT+AGG | + | chr4.2:90877338-90877357 | MS.gene37653:intron | 20.0% |
| !! | TGTCAATTTGAAAAAGAAAA+AGG | + | chr4.2:90878317-90878336 | MS.gene37653:intron | 20.0% |
| !!! | AAAAAGATGCATTAACTTTT+TGG | + | chr4.2:90876531-90876550 | MS.gene37653:intron | 20.0% |
| !!! | AATGTCAATTTCAAGTTTAA+TGG | + | chr4.2:90877522-90877541 | MS.gene37653:intron | 20.0% |
| !!! | AATTTCATTTCTTTTCTCTT+AGG | + | chr4.2:90877635-90877654 | MS.gene37653:intron | 20.0% |
| !!! | CGGTTAATATATTTCATTTT+TGG | - | chr4.2:90875524-90875543 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+TGG | - | chr4.2:90876292-90876311 | None:intergenic | 20.0% |
| !!! | TATATAATTTTGTGTGTTGT+AGG | + | chr4.2:90874708-90874727 | MS.gene37653:intron | 20.0% |
| !!! | TCGAATTTTTAAGAATAAAC+AGG | - | chr4.2:90875747-90875766 | None:intergenic | 20.0% |
| !!! | TGATTTTGATAATCATGAAA+AGG | + | chr4.2:90876142-90876161 | MS.gene37653:intron | 20.0% |
| ! | AAAGACAAAATGTATGTCTT+TGG | - | chr4.2:90874970-90874989 | None:intergenic | 25.0% |
| ! | AACAAATCACAAAATTCATG+TGG | + | chr4.2:90877841-90877860 | MS.gene37653:CDS | 25.0% |
| ! | AAGTATGGTTGAGAAAAATA+TGG | + | chr4.2:90878499-90878518 | MS.gene37653:intron | 25.0% |
| ! | AATGGTAACATATAAGATGT+TGG | + | chr4.2:90875356-90875375 | MS.gene37653:intron | 25.0% |
| ! | AGAAACAAGAAGAAAATGTT+GGG | + | chr4.2:90877800-90877819 | MS.gene37653:CDS | 25.0% |
| ! | ATTTAGCACTTATCAAAGTA+TGG | + | chr4.2:90878484-90878503 | MS.gene37653:intron | 25.0% |
| ! | CCCTATAAATTAATAATGTC+AGG | - | chr4.2:90877342-90877361 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr4.2:90876403-90876422 | None:intergenic | 25.0% |
| ! | GGAGGTAGTATAATTTATTA+GGG | - | chr4.2:90875249-90875268 | None:intergenic | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | - | chr4.2:90877337-90877356 | None:intergenic | 25.0% |
| ! | TAATCATACTGACGTATATA+CGG | - | chr4.2:90876210-90876229 | None:intergenic | 25.0% |
| ! | TGGAGGTAGTATAATTTATT+AGG | - | chr4.2:90875250-90875269 | None:intergenic | 25.0% |
| ! | TGTATTGTTAAAATCACATG+TGG | + | chr4.2:90876614-90876633 | MS.gene37653:intron | 25.0% |
| !! | ACAGTGTATTGATCATATAA+TGG | + | chr4.2:90875134-90875153 | MS.gene37653:CDS | 25.0% |
| !! | ACAGTTGAAGATTTTCAATA+TGG | - | chr4.2:90878020-90878039 | None:intergenic | 25.0% |
| !! | ACATGGTTTGAAATCAAAAA+AGG | + | chr4.2:90874924-90874943 | MS.gene37653:CDS | 25.0% |
| !! | AGAGATCCCTTTATAATTTT+CGG | + | chr4.2:90876997-90877016 | MS.gene37653:intron | 25.0% |
| !! | TCATATTTTTCTGAGTTGTT+TGG | - | chr4.2:90875950-90875969 | None:intergenic | 25.0% |
| !!! | ATGAATTTTGTGATTTGTTG+AGG | - | chr4.2:90877840-90877859 | None:intergenic | 25.0% |
| !!! | CGCTATTTTACGTATAAAAA+CGG | + | chr4.2:90878408-90878427 | MS.gene37653:intron | 25.0% |
| !!! | CTTTTTCAAATTGACATCAA+TGG | - | chr4.2:90878313-90878332 | None:intergenic | 25.0% |
| !!! | GACTAATTTGTCTTTTTGTT+TGG | + | chr4.2:90877217-90877236 | MS.gene37653:intron | 25.0% |
| !!! | GCTCAATTTTTTTTGAGATA+TGG | + | chr4.2:90878523-90878542 | MS.gene37653:intron | 25.0% |
| !!! | TGAATTTTGTGATTTGTTGA+GGG | - | chr4.2:90877839-90877858 | None:intergenic | 25.0% |
| ACATGTGCAAATCAACTATA+TGG | + | chr4.2:90877596-90877615 | MS.gene37653:intron | 30.0% | |
| ATATAATGGCAGAGAGAAAA+CGG | + | chr4.2:90875148-90875167 | MS.gene37653:CDS | 30.0% | |
| ATCAAGATAAGATCAAGTGT+AGG | + | chr4.2:90875592-90875611 | MS.gene37653:intron | 30.0% | |
| ATCCATTGTGAGAAACAAAA+TGG | + | chr4.2:90877973-90877992 | MS.gene37653:CDS | 30.0% | |
| ATTTCGAACAAGTCATCATT+CGG | + | chr4.2:90877427-90877446 | MS.gene37653:intron | 30.0% | |
| CTAGAACTCAAATTAACACA+AGG | - | chr4.2:90875027-90875046 | None:intergenic | 30.0% | |
| GAAACAAGAAGAAAATGTTG+GGG | + | chr4.2:90877801-90877820 | MS.gene37653:CDS | 30.0% | |
| GAGAAACAAGAAGAAAATGT+TGG | + | chr4.2:90877799-90877818 | MS.gene37653:CDS | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | - | chr4.2:90877099-90877118 | None:intergenic | 30.0% | |
| GTTTCTACTGTATATCACTT+TGG | - | chr4.2:90876856-90876875 | None:intergenic | 30.0% | |
| TACACAATAACTAGCCAAAT+TGG | + | chr4.2:90875791-90875810 | MS.gene37653:intron | 30.0% | |
| TATTCATGTTCTTGATGAGT+TGG | + | chr4.2:90878125-90878144 | MS.gene37653:intron | 30.0% | |
| TCCAATTTGGCAATTTAAGA+GGG | - | chr4.2:90875847-90875866 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr4.2:90876418-90876437 | None:intergenic | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | - | chr4.2:90877006-90877025 | None:intergenic | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | + | chr4.2:90876466-90876485 | MS.gene37653:intron | 30.0% | |
| TTTCAAATATTGCCCTACAA+TGG | - | chr4.2:90878212-90878231 | None:intergenic | 30.0% | |
| TTTCCATCACTATAATTGCT+CGG | + | chr4.2:90878082-90878101 | MS.gene37653:CDS | 30.0% | |
| TTTGTATGTGTTTCCGAAAT+AGG | - | chr4.2:90876011-90876030 | None:intergenic | 30.0% | |
| ! | ATTTTGTGTGTTGTAGGAAT+TGG | + | chr4.2:90874714-90874733 | MS.gene37653:intron | 30.0% |
| ! | CTTGTGTTAATTTGAGTTCT+AGG | + | chr4.2:90875025-90875044 | MS.gene37653:CDS | 30.0% |
| ! | GAAATAGTTGATTTCCCAAA+TGG | - | chr4.2:90878066-90878085 | None:intergenic | 30.0% |
| ! | GAATTCCTCAAATTCTAAGA+TGG | + | chr4.2:90878168-90878187 | MS.gene37653:intron | 30.0% |
| ! | TAAAAAAAGGTACAATCACG+TGG | - | chr4.2:90876575-90876594 | None:intergenic | 30.0% |
| ! | TGTCTTTTGATCTTTAGTTG+TGG | - | chr4.2:90875652-90875671 | None:intergenic | 30.0% |
| !! | TTCCATTTTGTTTCTCACAA+TGG | - | chr4.2:90877978-90877997 | None:intergenic | 30.0% |
| !!! | AGGGTTTTAACTGTATTAGA+GGG | + | chr4.2:90877358-90877377 | MS.gene37653:intron | 30.0% |
| !!! | CACGATCATCATTGTTTTTA+TGG | + | chr4.2:90878273-90878292 | MS.gene37653:intron | 30.0% |
| !!! | TAGGGTTTTAACTGTATTAG+AGG | + | chr4.2:90877357-90877376 | MS.gene37653:intron | 30.0% |
| !!! | TTTTGATGTTGTTGGTAACA+TGG | + | chr4.2:90874831-90874850 | MS.gene37653:CDS | 30.0% |
| AAAGCTTCAATACTTCAAGC+AGG | + | chr4.2:90877733-90877752 | MS.gene37653:CDS | 35.0% | |
| AATCATCATCGTCAGTGTTA+AGG | - | chr4.2:90874777-90874796 | None:intergenic | 35.0% | |
| AATCTTCAACTGTTTGTCAC+TGG | + | chr4.2:90878027-90878046 | MS.gene37653:CDS | 35.0% | |
| ACAAAACTCATACAAGCGAT+AGG | + | chr4.2:90875617-90875636 | MS.gene37653:intron | 35.0% | |
| ACAATCACGTGGTTTATGAT+GGG | - | chr4.2:90876564-90876583 | None:intergenic | 35.0% | |
| ACCCTCTTAAATTGCCAAAT+TGG | + | chr4.2:90875843-90875862 | MS.gene37653:intron | 35.0% | |
| ACTGTTGTGTTCATATGCAT+TGG | - | chr4.2:90877143-90877162 | None:intergenic | 35.0% | |
| AGATATTGAAGCAAGAGTCA+TGG | + | chr4.2:90877930-90877949 | MS.gene37653:CDS | 35.0% | |
| ATGACTCTTGCTTCAATATC+TGG | - | chr4.2:90877931-90877950 | None:intergenic | 35.0% | |
| CAAAACTCATACAAGCGATA+GGG | + | chr4.2:90875618-90875637 | MS.gene37653:intron | 35.0% | |
| CAAATCAATGGAGCTAAGAA+AGG | + | chr4.2:90875099-90875118 | MS.gene37653:CDS | 35.0% | |
| CAAGAACAAGAACAACAACA+TGG | + | chr4.2:90874907-90874926 | MS.gene37653:CDS | 35.0% | |
| CAATATCTGGAAGGATACTA+TGG | - | chr4.2:90877918-90877937 | None:intergenic | 35.0% | |
| CCAACAACATCAAAACTTTC+TGG | - | chr4.2:90874826-90874845 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCACA+AGG | + | chr4.2:90877165-90877184 | MS.gene37653:intron | 35.0% | |
| CTCAAATTAACACAAGGTTC+TGG | - | chr4.2:90875021-90875040 | None:intergenic | 35.0% | |
| CTCCAATTTGGCAATTTAAG+AGG | - | chr4.2:90875848-90875867 | None:intergenic | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | - | chr4.2:90877007-90877026 | None:intergenic | 35.0% | |
| GAAAATTGGTCAGTTATTCC+AGG | - | chr4.2:90876278-90876297 | None:intergenic | 35.0% | |
| GATATTGAAGCAAGAGTCAT+GGG | + | chr4.2:90877931-90877950 | MS.gene37653:CDS | 35.0% | |
| GCAATCCATCTTAGAATTTG+AGG | - | chr4.2:90878176-90878195 | None:intergenic | 35.0% | |
| TACAATCACGTGGTTTATGA+TGG | - | chr4.2:90876565-90876584 | None:intergenic | 35.0% | |
| TATGTGTTTCCGAAATAGGA+CGG | - | chr4.2:90876007-90876026 | None:intergenic | 35.0% | |
| TCAAAAAAGGTTCCTCGTAA+AGG | + | chr4.2:90874937-90874956 | MS.gene37653:CDS | 35.0% | |
| TGATAACAATGATACTCCAC+TGG | + | chr4.2:90876170-90876189 | MS.gene37653:intron | 35.0% | |
| TGTTCTTGTTCTTGTTCTTG+TGG | - | chr4.2:90874901-90874920 | None:intergenic | 35.0% | |
| TTATATTGCAGATGGGAGAT+GGG | + | chr4.2:90878655-90878674 | MS.gene37653:intron | 35.0% | |
| TTCCATCACTATAATTGCTC+GGG | + | chr4.2:90878083-90878102 | MS.gene37653:CDS | 35.0% | |
| TTTATATTGCAGATGGGAGA+TGG | + | chr4.2:90878654-90878673 | MS.gene37653:intron | 35.0% | |
| ! | CTTTTGATCTTTAGTTGTGG+TGG | - | chr4.2:90875649-90875668 | None:intergenic | 35.0% |
| ! | GGGAAATTTTCATCTTGACA+TGG | + | chr4.2:90874624-90874643 | MS.gene37653:CDS | 35.0% |
| ! | GGTCTAGTTTACATCCAATT+TGG | - | chr4.2:90875808-90875827 | None:intergenic | 35.0% |
| !! | AAAGAGTATCCGTCCTATTT+CGG | + | chr4.2:90875995-90876014 | MS.gene37653:intron | 35.0% |
| !! | AGATGGATTGCATTGATTGA+CGG | + | chr4.2:90878185-90878204 | MS.gene37653:intron | 35.0% |
| !! | CCAGAAAGTTTTGATGTTGT+TGG | + | chr4.2:90874823-90874842 | MS.gene37653:CDS | 35.0% |
| !!! | CAGCTTTTTGAGTACTTTCA+CGG | - | chr4.2:90875062-90875081 | None:intergenic | 35.0% |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr4.2:90876938-90876957 | None:intergenic | 35.0% |
| AACGTCACTGCATTCTTGAA+AGG | - | chr4.2:90876732-90876751 | None:intergenic | 40.0% | |
| ACGTCACTGCATTCTTGAAA+GGG | - | chr4.2:90876731-90876750 | None:intergenic | 40.0% | |
| ACGTTAAATAGCTTGAGGTG+AGG | + | chr4.2:90876747-90876766 | MS.gene37653:intron | 40.0% | |
| ATTGATTGACGGTCCATTGT+AGG | + | chr4.2:90878196-90878215 | MS.gene37653:intron | 40.0% | |
| ATTGGTCAGTTATTCCAGGA+CGG | - | chr4.2:90876274-90876293 | None:intergenic | 40.0% | |
| CAGTGACGTTAAATAGCTTG+AGG | + | chr4.2:90876742-90876761 | MS.gene37653:intron | 40.0% | |
| CGTATATACGGTATGACTGA+AGG | - | chr4.2:90876198-90876217 | None:intergenic | 40.0% | |
| CTCTTGCTTCAATATCTGGA+AGG | - | chr4.2:90877927-90877946 | None:intergenic | 40.0% | |
| GTCAATTAAATTGGGACGGA+GGG | + | chr4.2:90876470-90876489 | MS.gene37653:intron | 40.0% | |
| GTGTTGTAGGAATTGGATTG+CGG | + | chr4.2:90874721-90874740 | MS.gene37653:intron | 40.0% | |
| TACCCGAGCAATTATAGTGA+TGG | - | chr4.2:90878088-90878107 | None:intergenic | 40.0% | |
| TAGGACGGATACTCTTTGTT+CGG | - | chr4.2:90875992-90876011 | None:intergenic | 40.0% | |
| TCTGAGCAAGTTCTCCAATT+TGG | - | chr4.2:90875860-90875879 | None:intergenic | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | + | chr4.2:90876469-90876488 | MS.gene37653:intron | 40.0% | |
| TTGATTGACGGTCCATTGTA+GGG | + | chr4.2:90878197-90878216 | MS.gene37653:intron | 40.0% | |
| TTTGGAGAAGAACCTTTACG+AGG | - | chr4.2:90874952-90874971 | None:intergenic | 40.0% | |
| ! | GAGGGAAGCTGTAGAATTTT+TGG | + | chr4.2:90877376-90877395 | MS.gene37653:intron | 40.0% |
| ! | GTGAGGTTTGTCACTTATTC+TGG | + | chr4.2:90876764-90876783 | MS.gene37653:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | - | chr4.2:90876937-90876956 | None:intergenic | 40.0% |
| !! | GTTTGGTCTTCGATGGATTA+TGG | - | chr4.2:90875933-90875952 | None:intergenic | 40.0% |
| AGGACGGATACTCTTTGTTC+GGG | - | chr4.2:90875991-90876010 | None:intergenic | 45.0% | |
| CAATTTACCTTGCTCAAGCC+AGG | - | chr4.2:90875219-90875238 | None:intergenic | 45.0% | |
| CGCTGCAACGTAATTCTAAG+AGG | + | chr4.2:90877190-90877209 | MS.gene37653:intron | 45.0% | |
| GCACTTTCAGCTACTATTCC+TGG | + | chr4.2:90875198-90875217 | MS.gene37653:CDS | 45.0% | |
| TGAAGCAAGAGTCATGGGAA+AGG | + | chr4.2:90877936-90877955 | MS.gene37653:CDS | 45.0% | |
| ! | ATCACGTGGTTTATGATGGG+CGG | - | chr4.2:90876561-90876580 | None:intergenic | 45.0% |
| ! | CTGAGTTGTTTGGTCTTCGA+TGG | - | chr4.2:90875940-90875959 | None:intergenic | 45.0% |
| ! | CTGGCTTGAGCAAGGTAAAT+TGG | + | chr4.2:90875217-90875236 | MS.gene37653:intron | 45.0% |
| ! | GTAGCAGTGTCTTGCCATTT+GGG | + | chr4.2:90878049-90878068 | MS.gene37653:CDS | 45.0% |
| ! | TACTATTCCTGGCTTGAGCA+AGG | + | chr4.2:90875209-90875228 | MS.gene37653:CDS | 45.0% |
| ! | TGTTGCTTACGGGGCATTAA+CGG | - | chr4.2:90875544-90875563 | None:intergenic | 45.0% |
| !! | AGCACCCTATGTGTTGCTTA+CGG | - | chr4.2:90875555-90875574 | None:intergenic | 45.0% |
| !! | GAGGGTACTCGATGAAACTT+CGG | - | chr4.2:90875829-90875848 | None:intergenic | 45.0% |
| !!! | ACATTTTTATATATAAAAAA+AGG | - | chr4.2:90876588-90876607 | None:intergenic | 5.0% |
| !!! | TTTTTTTATATATAAAAATG+TGG | + | chr4.2:90876587-90876606 | MS.gene37653:intron | 5.0% |
| AAATTTGTCCGGTCCCGACT+TGG | + | chr4.2:90876921-90876940 | MS.gene37653:intron | 50.0% | |
| AATTTGTCCGGTCCCGACTT+GGG | + | chr4.2:90876922-90876941 | MS.gene37653:intron | 50.0% | |
| ACGGAGGGAGTAATAGGACA+TGG | - | chr4.2:90876255-90876274 | None:intergenic | 50.0% | |
| ACGGATACTCTTTGTTCGGG+TGG | - | chr4.2:90875988-90876007 | None:intergenic | 50.0% | |
| ATGCCCCGTAAGCAACACAT+AGG | + | chr4.2:90875547-90875566 | MS.gene37653:intron | 50.0% | |
| CGGATACTCTTTGTTCGGGT+GGG | - | chr4.2:90875987-90876006 | None:intergenic | 50.0% | |
| GGTAGCAGTGTCTTGCCATT+TGG | + | chr4.2:90878048-90878067 | MS.gene37653:CDS | 50.0% | |
| GGTATGACTGAAGGATCCAG+TGG | - | chr4.2:90876189-90876208 | None:intergenic | 50.0% | |
| GTCAGTTATTCCAGGACGGA+GGG | - | chr4.2:90876270-90876289 | None:intergenic | 50.0% | |
| TGCCCCGTAAGCAACACATA+GGG | + | chr4.2:90875548-90875567 | MS.gene37653:intron | 50.0% | |
| ! | ACACAAGGTTCTGGTGTAGC+TGG | - | chr4.2:90875012-90875031 | None:intergenic | 50.0% |
| !! | CACCCTATGTGTTGCTTACG+GGG | - | chr4.2:90875553-90875572 | None:intergenic | 50.0% |
| !! | GCACCCTATGTGTTGCTTAC+GGG | - | chr4.2:90875554-90875573 | None:intergenic | 50.0% |
| !! | TCACGTGGTTTATGATGGGC+GGG | - | chr4.2:90876560-90876579 | None:intergenic | 50.0% |
| GGTCAGTTATTCCAGGACGG+AGG | - | chr4.2:90876271-90876290 | None:intergenic | 55.0% | |
| TCCAGGACGGAGGGAGTAAT+AGG | - | chr4.2:90876261-90876280 | None:intergenic | 55.0% | |
| TCCTATTACTCCCTCCGTCC+TGG | + | chr4.2:90876257-90876276 | MS.gene37653:intron | 55.0% | |
| !! | CACGTGGTTTATGATGGGCG+GGG | - | chr4.2:90876559-90876578 | None:intergenic | 55.0% |
| ACATTGGCCCAAGTCGGGAC+CGG | - | chr4.2:90876932-90876951 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 90874610 | 90878749 | 90874610 | ID=MS.gene37653 |
| chr4.2 | mRNA | 90874610 | 90878749 | 90874610 | ID=MS.gene37653.t1;Parent=MS.gene37653 |
| chr4.2 | exon | 90874610 | 90874645 | 90874610 | ID=MS.gene37653.t1.exon1;Parent=MS.gene37653.t1 |
| chr4.2 | CDS | 90874610 | 90874645 | 90874610 | ID=cds.MS.gene37653.t1;Parent=MS.gene37653.t1 |
| chr4.2 | exon | 90874730 | 90875230 | 90874730 | ID=MS.gene37653.t1.exon2;Parent=MS.gene37653.t1 |
| chr4.2 | CDS | 90874730 | 90875230 | 90874730 | ID=cds.MS.gene37653.t1;Parent=MS.gene37653.t1 |
| chr4.2 | exon | 90877727 | 90878104 | 90877727 | ID=MS.gene37653.t1.exon3;Parent=MS.gene37653.t1 |
| chr4.2 | CDS | 90877727 | 90878104 | 90877727 | ID=cds.MS.gene37653.t1;Parent=MS.gene37653.t1 |
| chr4.2 | exon | 90878666 | 90878749 | 90878666 | ID=MS.gene37653.t1.exon4;Parent=MS.gene37653.t1 |
| chr4.2 | CDS | 90878666 | 90878749 | 90878666 | ID=cds.MS.gene37653.t1;Parent=MS.gene37653.t1 |
| Gene Sequence |
| Protein sequence |
