Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38799.t1 | KEH23600.1 | 80.7 | 332 | 57 | 2 | 1 | 332 | 1 | 325 | 6.20E-152 | 547 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38799.t1 | Q4V3D9 | 55.8 | 369 | 118 | 2 | 9 | 332 | 6 | 374 | 8.8e-115 | 414.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38799.t1 | A0A072UCL7 | 80.7 | 332 | 57 | 2 | 1 | 332 | 1 | 325 | 4.5e-152 | 547.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene38799 | 0.804722 | 1.88E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene38799 | 0.806328 | 8.68E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene38799 | 0.820202 | 7.77E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene38799 | 0.827634 | 1.40E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene38799 | 0.811887 | 5.59E-51 | -1.69E-46 |
| MS.gene051588 | MS.gene38799 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene38799 | -0.838755 | 2.38E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene38799 | 0.804455 | 2.14E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene38799 | 0.854591 | 1.11E-61 | -1.69E-46 |
| MS.gene052340 | MS.gene38799 | 0.82689 | 2.12E-54 | -1.69E-46 |
| MS.gene052485 | MS.gene38799 | 0.810135 | 1.34E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene38799 | 0.806232 | 9.09E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene38799 | 0.820823 | 5.59E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene38799 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene38799 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene38799 | 0.808146 | 3.57E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene38799 | 0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene05413 | MS.gene38799 | 0.802737 | 4.87E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene38799 | 0.866386 | 2.96E-65 | -1.69E-46 |
| MS.gene054349 | MS.gene38799 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene38799 | 0.82472 | 6.93E-54 | -1.69E-46 |
| MS.gene054918 | MS.gene38799 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene38799 | 0.858088 | 1.05E-62 | -1.69E-46 |
| MS.gene055369 | MS.gene38799 | 0.834263 | 3.32E-56 | -1.69E-46 |
| MS.gene05553 | MS.gene38799 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene38799 | 0.807221 | 5.62E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene38799 | 0.828361 | 9.38E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene38799 | 0.816622 | 5.03E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene38799 | 0.839719 | 1.34E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene38799 | 0.826167 | 3.15E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene38799 | 0.846697 | 1.85E-59 | -1.69E-46 |
| MS.gene057476 | MS.gene38799 | 0.843587 | 1.28E-58 | -1.69E-46 |
| MS.gene057749 | MS.gene38799 | 0.812938 | 3.30E-51 | -1.69E-46 |
| MS.gene057825 | MS.gene38799 | 0.817175 | 3.78E-52 | -1.69E-46 |
| MS.gene057833 | MS.gene38799 | 0.816066 | 6.70E-52 | -1.69E-46 |
| MS.gene057843 | MS.gene38799 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene057888 | MS.gene38799 | 0.817263 | 3.61E-52 | -1.69E-46 |
| MS.gene058007 | MS.gene38799 | 0.835932 | 1.26E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene38799 | 0.811164 | 8.03E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene38799 | 0.814091 | 1.84E-51 | -1.69E-46 |
| MS.gene058995 | MS.gene38799 | 0.824638 | 7.24E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene38799 | 0.864207 | 1.44E-64 | -1.69E-46 |
| MS.gene05907 | MS.gene38799 | 0.818583 | 1.82E-52 | -1.69E-46 |
| MS.gene059080 | MS.gene38799 | 0.804402 | 2.20E-49 | -1.69E-46 |
| MS.gene059082 | MS.gene38799 | 0.858613 | 7.31E-63 | -1.69E-46 |
| MS.gene059420 | MS.gene38799 | 0.876257 | 1.61E-68 | -1.69E-46 |
| MS.gene059462 | MS.gene38799 | 0.879818 | 9.14E-70 | -1.69E-46 |
| MS.gene059688 | MS.gene38799 | 0.826623 | 2.45E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene38799 | 0.809601 | 1.75E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene38799 | 0.813489 | 2.49E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene38799 | 0.818124 | 2.31E-52 | -1.69E-46 |
| MS.gene059868 | MS.gene38799 | 0.811768 | 5.93E-51 | -1.69E-46 |
| MS.gene059876 | MS.gene38799 | 0.840174 | 1.02E-57 | -1.69E-46 |
| MS.gene060038 | MS.gene38799 | 0.811857 | 5.68E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene38799 | 0.829461 | 5.08E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene38799 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene38799 | 0.821161 | 4.68E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene38799 | 0.838931 | 2.15E-57 | -1.69E-46 |
| MS.gene061214 | MS.gene38799 | 0.815565 | 8.66E-52 | -1.69E-46 |
| MS.gene061215 | MS.gene38799 | 0.815733 | 7.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38799 | MS.gene059296 | PPI |
| MS.gene38799 | MS.gene61630 | PPI |
| MS.gene38799 | MS.gene66625 | PPI |
| MS.gene38799 | MS.gene35719 | PPI |
| MS.gene38799 | MS.gene061292 | PPI |
| MS.gene38799 | MS.gene034366 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38799.t1 | MTR_7g490330 | 80.723 | 332 | 57 | 2 | 1 | 332 | 1 | 325 | 0.0 | 548 |
| MS.gene38799.t1 | MTR_7g090300 | 71.622 | 370 | 66 | 2 | 1 | 332 | 1 | 369 | 0.0 | 526 |
| MS.gene38799.t1 | MTR_7g490350 | 71.351 | 370 | 67 | 2 | 1 | 332 | 1 | 369 | 0.0 | 525 |
| MS.gene38799.t1 | MTR_5g091980 | 78.012 | 332 | 64 | 2 | 1 | 332 | 1 | 323 | 0.0 | 518 |
| MS.gene38799.t1 | MTR_2g087780 | 50.000 | 352 | 125 | 5 | 29 | 332 | 47 | 395 | 6.17e-110 | 326 |
| MS.gene38799.t1 | MTR_4g050190 | 49.408 | 338 | 122 | 5 | 41 | 332 | 57 | 391 | 6.39e-106 | 315 |
| MS.gene38799.t1 | MTR_2g099030 | 49.074 | 324 | 117 | 4 | 51 | 327 | 79 | 401 | 2.45e-100 | 301 |
| MS.gene38799.t1 | MTR_7g090310 | 41.867 | 375 | 163 | 6 | 12 | 331 | 11 | 385 | 2.08e-98 | 296 |
| MS.gene38799.t1 | MTR_7g090320 | 45.921 | 331 | 128 | 4 | 52 | 331 | 56 | 386 | 2.91e-98 | 296 |
| MS.gene38799.t1 | MTR_4g112670 | 42.857 | 301 | 151 | 3 | 50 | 330 | 35 | 334 | 1.02e-79 | 246 |
| MS.gene38799.t1 | MTR_4g112630 | 43.103 | 290 | 153 | 4 | 53 | 331 | 37 | 325 | 2.67e-76 | 237 |
| MS.gene38799.t1 | MTR_4g112650 | 39.826 | 344 | 171 | 6 | 3 | 326 | 2 | 329 | 3.85e-75 | 234 |
| MS.gene38799.t1 | MTR_2g058450 | 42.140 | 299 | 153 | 5 | 53 | 332 | 39 | 336 | 5.07e-69 | 219 |
| MS.gene38799.t1 | MTR_4g112620 | 37.931 | 290 | 137 | 4 | 54 | 331 | 42 | 300 | 2.22e-57 | 188 |
| MS.gene38799.t1 | MTR_2g058410 | 39.130 | 230 | 125 | 2 | 115 | 329 | 1 | 230 | 7.95e-45 | 153 |
| MS.gene38799.t1 | MTR_0003s0530 | 39.560 | 182 | 94 | 1 | 159 | 324 | 2 | 183 | 8.64e-39 | 137 |
| MS.gene38799.t1 | MTR_8g074210 | 35.776 | 232 | 128 | 4 | 51 | 282 | 75 | 285 | 2.43e-37 | 137 |
| MS.gene38799.t1 | MTR_8g074270 | 37.118 | 229 | 123 | 5 | 54 | 282 | 78 | 285 | 4.16e-37 | 137 |
| MS.gene38799.t1 | MTR_8g074170 | 37.229 | 231 | 120 | 7 | 54 | 282 | 78 | 285 | 9.67e-36 | 133 |
| MS.gene38799.t1 | MTR_2g042370 | 28.889 | 315 | 165 | 8 | 55 | 332 | 65 | 357 | 7.43e-27 | 108 |
| MS.gene38799.t1 | MTR_2g042420 | 26.757 | 370 | 210 | 9 | 1 | 332 | 3 | 349 | 2.50e-26 | 107 |
| MS.gene38799.t1 | MTR_1g075865 | 41.509 | 106 | 61 | 1 | 163 | 268 | 7 | 111 | 2.45e-24 | 96.7 |
| MS.gene38799.t1 | MTR_2g042430 | 27.653 | 311 | 165 | 8 | 55 | 328 | 77 | 364 | 1.03e-23 | 100 |
| MS.gene38799.t1 | MTR_4g112840 | 47.778 | 90 | 47 | 0 | 192 | 281 | 63 | 152 | 1.04e-22 | 93.2 |
| MS.gene38799.t1 | MTR_8g074320 | 40.152 | 132 | 74 | 3 | 109 | 237 | 92 | 221 | 1.60e-19 | 86.3 |
| MS.gene38799.t1 | MTR_2g058430 | 41.237 | 97 | 55 | 1 | 106 | 200 | 52 | 148 | 7.48e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38799.t1 | AT3G57030 | 55.645 | 372 | 120 | 3 | 6 | 332 | 3 | 374 | 2.06e-145 | 415 |
| MS.gene38799.t1 | AT1G08470 | 49.704 | 338 | 120 | 5 | 41 | 332 | 56 | 389 | 4.02e-106 | 316 |
| MS.gene38799.t1 | AT5G22020 | 48.387 | 341 | 128 | 4 | 37 | 332 | 58 | 395 | 1.47e-105 | 315 |
| MS.gene38799.t1 | AT5G22020 | 48.387 | 341 | 128 | 4 | 37 | 332 | 58 | 395 | 1.47e-105 | 315 |
| MS.gene38799.t1 | AT5G22020 | 48.387 | 341 | 128 | 4 | 37 | 332 | 58 | 395 | 1.47e-105 | 315 |
| MS.gene38799.t1 | AT2G41290 | 46.726 | 336 | 130 | 6 | 45 | 332 | 42 | 376 | 1.67e-93 | 283 |
| MS.gene38799.t1 | AT3G57020 | 43.417 | 357 | 156 | 6 | 14 | 329 | 15 | 366 | 2.35e-92 | 280 |
| MS.gene38799.t1 | AT3G57010 | 42.663 | 368 | 166 | 5 | 3 | 329 | 4 | 367 | 1.55e-91 | 278 |
| MS.gene38799.t1 | AT3G59530 | 45.732 | 328 | 119 | 5 | 49 | 329 | 79 | 394 | 1.19e-90 | 276 |
| MS.gene38799.t1 | AT3G59530 | 45.732 | 328 | 119 | 5 | 49 | 329 | 79 | 394 | 1.19e-90 | 276 |
| MS.gene38799.t1 | AT3G59530 | 45.732 | 328 | 119 | 5 | 49 | 329 | 79 | 394 | 1.19e-90 | 276 |
| MS.gene38799.t1 | AT2G41300 | 46.774 | 310 | 122 | 3 | 60 | 329 | 84 | 390 | 1.65e-88 | 271 |
| MS.gene38799.t1 | AT3G57020 | 42.297 | 357 | 146 | 6 | 14 | 329 | 15 | 352 | 3.51e-86 | 264 |
| MS.gene38799.t1 | AT1G74020 | 42.662 | 293 | 151 | 6 | 54 | 332 | 38 | 327 | 8.71e-70 | 221 |
| MS.gene38799.t1 | AT1G74010 | 42.568 | 296 | 152 | 7 | 51 | 332 | 34 | 325 | 6.64e-68 | 216 |
| MS.gene38799.t1 | AT1G74000 | 40.476 | 294 | 158 | 6 | 53 | 332 | 39 | 329 | 7.91e-64 | 205 |
| MS.gene38799.t1 | AT3G51440 | 34.413 | 247 | 142 | 6 | 41 | 286 | 56 | 283 | 9.89e-31 | 119 |
| MS.gene38799.t1 | AT3G51430 | 32.271 | 251 | 150 | 6 | 37 | 286 | 52 | 283 | 7.49e-29 | 114 |
| MS.gene38799.t1 | AT3G51450 | 33.047 | 233 | 136 | 7 | 55 | 286 | 70 | 283 | 2.26e-28 | 113 |
| MS.gene38799.t1 | AT3G51430 | 31.325 | 249 | 151 | 6 | 37 | 284 | 52 | 281 | 3.00e-28 | 113 |
| MS.gene38799.t1 | AT3G51420 | 31.818 | 242 | 145 | 6 | 41 | 281 | 56 | 278 | 1.18e-27 | 111 |
Find 85 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCACTGATGTTCTTCA+TGG | 0.198711 | 7.1:+16988276 | None:intergenic |
| GAAATTCAAATGGGCAGTTT+TGG | 0.232638 | 7.1:-16988378 | MS.gene38799:CDS |
| TATATTGGTGTTTATAGTTT+AGG | 0.238782 | 7.1:-16988208 | MS.gene38799:CDS |
| CTCAATGTAGTGGGACCTAC+TGG | 0.241265 | 7.1:-16989371 | MS.gene38799:CDS |
| AATATTCTTGTACTTCTTAG+TGG | 0.314755 | 7.1:-16988628 | MS.gene38799:CDS |
| AGGGAAAATATTAGAAATCT+TGG | 0.328667 | 7.1:-16988317 | MS.gene38799:CDS |
| TTGCTTAAAGCAACACCATT+AGG | 0.331103 | 7.1:+16988529 | None:intergenic |
| GTATTGACTTTGCCAGCTTT+TGG | 0.331769 | 7.1:+16988439 | None:intergenic |
| GCGGGAGGCCACTAGGACTA+AGG | 0.337333 | 7.1:-16989442 | MS.gene38799:CDS |
| ACTGCAGAATTCTTCGGCTT+TGG | 0.342556 | 7.1:-16988471 | MS.gene38799:CDS |
| TATTAGAAATCTTGGGAGAT+TGG | 0.345041 | 7.1:-16988309 | MS.gene38799:CDS |
| AAACTATAAACACCAATATA+AGG | 0.351153 | 7.1:+16988211 | None:intergenic |
| TTGCTGTCACGAGTTCTAAT+AGG | 0.352873 | 7.1:-16990413 | MS.gene38799:intron |
| CTTCTTAGTGGAGACGCAAC+TGG | 0.367623 | 7.1:-16988616 | MS.gene38799:CDS |
| ACTCTCCGGTCCGACGGCTT+TGG | 0.383656 | 7.1:+16990530 | None:intergenic |
| AAGAGAGAAATGGAAAACTT+TGG | 0.411409 | 7.1:-16988252 | MS.gene38799:CDS |
| ATTCTTCGGCTTTGGCTTCG+TGG | 0.418524 | 7.1:-16988463 | MS.gene38799:CDS |
| TCAATGTAGTGGGACCTACT+GGG | 0.421424 | 7.1:-16989370 | MS.gene38799:CDS |
| CTTTCACTTCACCAATGACT+TGG | 0.432489 | 7.1:-16989306 | MS.gene38799:CDS |
| CTTATATTGTCGGGAAAACC+TGG | 0.434775 | 7.1:+16988403 | None:intergenic |
| TGAATTTCTCCTTATATTGT+CGG | 0.438415 | 7.1:+16988393 | None:intergenic |
| CCTCGAACTGCAGAATTCTT+CGG | 0.438961 | 7.1:-16988477 | MS.gene38799:CDS |
| CCGCAAATATGCTCTAACTT+TGG | 0.444704 | 7.1:+16989461 | None:intergenic |
| CAAAGTTAGAGCATATTTGC+GGG | 0.456089 | 7.1:-16989460 | MS.gene38799:CDS |
| GAATTTCTCCTTATATTGTC+GGG | 0.456126 | 7.1:+16988394 | None:intergenic |
| GGTGTTGCTTTAAGCAAAGA+TGG | 0.456261 | 7.1:-16988523 | MS.gene38799:CDS |
| TTCACTGATATCCAAGTCAT+TGG | 0.463204 | 7.1:+16989295 | None:intergenic |
| TGGCTTCGTGGACCAAAAGC+TGG | 0.463403 | 7.1:-16988451 | MS.gene38799:CDS |
| AGTGAAGTGGAAGAGAGAAA+TGG | 0.469053 | 7.1:-16988262 | MS.gene38799:CDS |
| GGGAAAATATTAGAAATCTT+GGG | 0.469300 | 7.1:-16988316 | MS.gene38799:CDS |
| TATATTGCTGATGCTTACCT+TGG | 0.473507 | 7.1:-16989395 | MS.gene38799:CDS |
| GCATGAGAAGAGTGCTAGAA+AGG | 0.478094 | 7.1:+16990647 | None:intergenic |
| AATATAAGGAGAAATTCAAA+TGG | 0.478511 | 7.1:-16988388 | MS.gene38799:CDS |
| TGCTCTAACTTTGGTGCGAA+TGG | 0.480454 | 7.1:+16989470 | None:intergenic |
| CCGAAGAATTCTGCAGTTCG+AGG | 0.480808 | 7.1:+16988477 | None:intergenic |
| CATATTTGCGGGAGGCCACT+AGG | 0.483919 | 7.1:-16989449 | MS.gene38799:CDS |
| TTTGATCCAGCAATGTGAAC+AGG | 0.486477 | 7.1:+16990588 | None:intergenic |
| CCATCCGCCACGCCGGTGTA+CGG | 0.487653 | 7.1:+16990480 | None:intergenic |
| TACTACATTGAGGATGTCCT+TGG | 0.488098 | 7.1:+16990671 | None:intergenic |
| GCTATAAAGCTGAGTGGTGA+AGG | 0.488363 | 7.1:-16988337 | MS.gene38799:CDS |
| CAAGTCATTGGTGAAGTGAA+AGG | 0.495058 | 7.1:+16989307 | None:intergenic |
| CCGTACACCGGCGTGGCGGA+TGG | 0.496328 | 7.1:-16990480 | MS.gene38799:CDS |
| TCAGTGGAAATGCCTTATAT+TGG | 0.502261 | 7.1:-16988223 | MS.gene38799:CDS |
| AAAACTTTGGATTGCATCAG+TGG | 0.505405 | 7.1:-16988239 | MS.gene38799:CDS |
| AGCTTCTATTGCTAGTTGAG+TGG | 0.511069 | 7.1:+16989340 | None:intergenic |
| AAGTGGGAGGGGAAGGAACG+TGG | 0.523034 | 7.1:-16990447 | MS.gene38799:CDS |
| CAATGTAGTGGGACCTACTG+GGG | 0.524671 | 7.1:-16989369 | MS.gene38799:CDS |
| CCAAAGTTAGAGCATATTTG+CGG | 0.526459 | 7.1:-16989461 | MS.gene38799:CDS |
| GAAGTGAAGGTCTTGTTAAG+AGG | 0.528733 | 7.1:-16988562 | MS.gene38799:CDS |
| AAGTCATTGGTGAAGTGAAA+GGG | 0.530724 | 7.1:+16989308 | None:intergenic |
| TGTTCACATTGCTGGATCAA+AGG | 0.537126 | 7.1:-16990586 | MS.gene38799:CDS |
| TACCTTGGCCTCAATGTAGT+GGG | 0.537777 | 7.1:-16989380 | MS.gene38799:CDS |
| GTCCGACGGCTTTGGTGACG+TGG | 0.539978 | 7.1:+16990538 | None:intergenic |
| TTATCAAACCTTAGTCCTAG+TGG | 0.561618 | 7.1:+16989434 | None:intergenic |
| CAATGTGAACAGGTGAAAAG+AGG | 0.562529 | 7.1:+16990598 | None:intergenic |
| CGTCACCAAAGCCGTCGGAC+CGG | 0.562729 | 7.1:-16990535 | MS.gene38799:CDS |
| GTCCCACTACATTGAGGCCA+AGG | 0.562852 | 7.1:+16989378 | None:intergenic |
| GGGAGGGGAAGGAACGTGGT+TGG | 0.562863 | 7.1:-16990443 | MS.gene38799:CDS |
| CATGGTGAGGGTCCGTACAC+CGG | 0.564118 | 7.1:-16990492 | MS.gene38799:CDS |
| CATGAAGAACATCAGTGAAG+TGG | 0.569248 | 7.1:-16988275 | MS.gene38799:CDS |
| GAAATCTTGGGAGATTGGCA+AGG | 0.571629 | 7.1:-16988304 | MS.gene38799:CDS |
| TAAGTCAACAAAAGAAGTGA+AGG | 0.571883 | 7.1:-16988575 | MS.gene38799:CDS |
| TTATCGAAAACAAGACTCTC+CGG | 0.573402 | 7.1:+16990516 | None:intergenic |
| ATATAAGGAGAAATTCAAAT+GGG | 0.580818 | 7.1:-16988387 | MS.gene38799:CDS |
| TTCTTAGTGGAGACGCAACT+GGG | 0.583966 | 7.1:-16988615 | MS.gene38799:CDS |
| ACACCGGCGTGGCGGATGGT+CGG | 0.585681 | 7.1:-16990476 | MS.gene38799:CDS |
| CAAGCACAGTCTATCAGAGA+AGG | 0.594605 | 7.1:-16989244 | MS.gene38799:intron |
| TTACCTTGGCCTCAATGTAG+TGG | 0.599466 | 7.1:-16989381 | MS.gene38799:CDS |
| AATGTAGTGGGACCTACTGG+GGG | 0.601063 | 7.1:-16989368 | MS.gene38799:CDS |
| AAATCTTGGGAGATTGGCAA+GGG | 0.602246 | 7.1:-16988303 | MS.gene38799:CDS |
| CTAGAAAGGTTACTACATTG+AGG | 0.603481 | 7.1:+16990661 | None:intergenic |
| AATCCGACCATCCGCCACGC+CGG | 0.605536 | 7.1:+16990473 | None:intergenic |
| CAACTAGCAATAGAAGCTGA+AGG | 0.619883 | 7.1:-16989335 | MS.gene38799:CDS |
| AACAAGACTCTCCGGTCCGA+CGG | 0.620082 | 7.1:+16990524 | None:intergenic |
| CAGTAGGTCCCACTACATTG+AGG | 0.626504 | 7.1:+16989372 | None:intergenic |
| CTATAAAGCTGAGTGGTGAA+GGG | 0.627218 | 7.1:-16988336 | MS.gene38799:CDS |
| CGTGGAGTATCTGAGCAGCA+TGG | 0.630959 | 7.1:+16990556 | None:intergenic |
| TATCATAAACATGAACTCCA+AGG | 0.639632 | 7.1:-16990688 | None:intergenic |
| CTCCACGTCACCAAAGCCGT+CGG | 0.656986 | 7.1:-16990540 | MS.gene38799:CDS |
| AGTTAGAGCATATTTGCGGG+AGG | 0.660243 | 7.1:-16989457 | MS.gene38799:CDS |
| TTGGATATCAGTGAAGATGA+AGG | 0.668380 | 7.1:-16989287 | MS.gene38799:CDS |
| GGGTCCGTACACCGGCGTGG+CGG | 0.673340 | 7.1:-16990484 | MS.gene38799:CDS |
| TGAGGGTCCGTACACCGGCG+TGG | 0.683753 | 7.1:-16990487 | MS.gene38799:CDS |
| GGAGTATCTGAGCAGCATGG+AGG | 0.725901 | 7.1:+16990559 | None:intergenic |
| TCAGCAGCTATAAAGCTGAG+TGG | 0.731970 | 7.1:-16988343 | MS.gene38799:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAACATATATATTTTTAA+GGG | - | chr7.1:16989797-16989816 | MS.gene38799:intron | 10.0% |
| !!! | TTTCTTTATTACTATTTTTT+TGG | - | chr7.1:16988529-16988548 | MS.gene38799:CDS | 10.0% |
| !! | ATAGGTATAGATATATTTAA+GGG | + | chr7.1:16988833-16988852 | None:intergenic | 15.0% |
| !! | TGATAAATAATCTCAATTAA+TGG | - | chr7.1:16989244-16989263 | MS.gene38799:intron | 15.0% |
| !! | TTATGAAAACGATTTATATA+TGG | + | chr7.1:16988886-16988905 | None:intergenic | 15.0% |
| !!! | CTTCAACATATATATTTTTA+AGG | - | chr7.1:16989796-16989815 | MS.gene38799:intron | 15.0% |
| !! | AAACTATAAACACCAATATA+AGG | + | chr7.1:16990671-16990690 | None:intergenic | 20.0% |
| !! | AAATATAAGTATGAGTTAGA+TGG | + | chr7.1:16989328-16989347 | None:intergenic | 20.0% |
| !! | AATAGAGTTAATTGTAGAAA+AGG | + | chr7.1:16989685-16989704 | None:intergenic | 20.0% |
| !! | AATATAAGGAGAAATTCAAA+TGG | - | chr7.1:16990491-16990510 | MS.gene38799:CDS | 20.0% |
| !! | ATATAAGGAGAAATTCAAAT+GGG | - | chr7.1:16990492-16990511 | MS.gene38799:CDS | 20.0% |
| !! | CATAGGTATAGATATATTTA+AGG | + | chr7.1:16988834-16988853 | None:intergenic | 20.0% |
| !! | CTAAAAATTTGTATTTCACA+AGG | + | chr7.1:16989945-16989964 | None:intergenic | 20.0% |
| !! | CTTAAATTAGTCAATCTAAA+CGG | - | chr7.1:16989012-16989031 | MS.gene38799:intron | 20.0% |
| !! | GTACTACTAACAATATATAT+TGG | - | chr7.1:16989879-16989898 | MS.gene38799:intron | 20.0% |
| !! | TACAAAATCCTTCTAATTTA+AGG | + | chr7.1:16989971-16989990 | None:intergenic | 20.0% |
| !! | TTAAATTAGTCAATCTAAAC+GGG | - | chr7.1:16989013-16989032 | MS.gene38799:intron | 20.0% |
| !!! | ATATTTTTAAGGGTATGATT+GGG | - | chr7.1:16989807-16989826 | MS.gene38799:intron | 20.0% |
| !!! | TATATTGGTGTTTATAGTTT+AGG | - | chr7.1:16990671-16990690 | MS.gene38799:CDS | 20.0% |
| !!! | TATATTTTTAAGGGTATGAT+TGG | - | chr7.1:16989806-16989825 | MS.gene38799:intron | 20.0% |
| !!! | TCTTTTTATATGGCATATTA+TGG | + | chr7.1:16990183-16990202 | None:intergenic | 20.0% |
| !!! | TGCTTTTAAGTTATTTTCAT+AGG | + | chr7.1:16988851-16988870 | None:intergenic | 20.0% |
| !!! | TTTAGTTTCCTTAAATTAGA+AGG | - | chr7.1:16989960-16989979 | MS.gene38799:intron | 20.0% |
| ! | AATAACTTAAAAGCAGCTTA+TGG | - | chr7.1:16988856-16988875 | MS.gene38799:intron | 25.0% |
| ! | AATATTCTTGTACTTCTTAG+TGG | - | chr7.1:16990251-16990270 | MS.gene38799:intron | 25.0% |
| ! | AGGGAAAATATTAGAAATCT+TGG | - | chr7.1:16990562-16990581 | MS.gene38799:CDS | 25.0% |
| ! | CATATAAAAAGAATGAGTGA+TGG | - | chr7.1:16990191-16990210 | MS.gene38799:intron | 25.0% |
| ! | CTAAGGTTTGATAAGAAAAA+TGG | - | chr7.1:16989454-16989473 | MS.gene38799:CDS | 25.0% |
| ! | CTTAAAACAGATAGAAAGTT+AGG | + | chr7.1:16989150-16989169 | None:intergenic | 25.0% |
| ! | GAAGAAGTAAATGAAAAGAA+TGG | + | chr7.1:16990027-16990046 | None:intergenic | 25.0% |
| ! | GGGAAAATATTAGAAATCTT+GGG | - | chr7.1:16990563-16990582 | MS.gene38799:CDS | 25.0% |
| ! | TAGGTAATAGTAATACCATT+TGG | - | chr7.1:16988485-16988504 | MS.gene38799:CDS | 25.0% |
| ! | TGAATTTCTCCTTATATTGT+CGG | + | chr7.1:16990489-16990508 | None:intergenic | 25.0% |
| ! | TGATGGAATGATTTATATGT+TGG | - | chr7.1:16990208-16990227 | MS.gene38799:intron | 25.0% |
| ! | TTGGATTTGAAGATTTATCT+CGG | - | chr7.1:16989898-16989917 | MS.gene38799:intron | 25.0% |
| ! | TTTACGAAATATGCATGAAA+AGG | - | chr7.1:16989752-16989771 | MS.gene38799:intron | 25.0% |
| !! | CATCACTCATTCTTTTTATA+TGG | + | chr7.1:16990193-16990212 | None:intergenic | 25.0% |
| !! | TAAGTAAGTCTTTTAAGCAT+GGG | - | chr7.1:16988755-16988774 | MS.gene38799:intron | 25.0% |
| !!! | GATTAGTTGTATGATTTTCA+AGG | - | chr7.1:16989371-16989390 | MS.gene38799:CDS | 25.0% |
| !!! | GTTTTAAGACATTGATAAAC+TGG | - | chr7.1:16989162-16989181 | MS.gene38799:intron | 25.0% |
| AAGAGAGAAATGGAAAACTT+TGG | - | chr7.1:16990627-16990646 | MS.gene38799:CDS | 30.0% | |
| AGAGTTAATTGTAGAAAAGG+AGG | + | chr7.1:16989682-16989701 | None:intergenic | 30.0% | |
| CATGCATATTTGATATGTTG+GGG | - | chr7.1:16988640-16988659 | MS.gene38799:intron | 30.0% | |
| GAATTTCTCCTTATATTGTC+GGG | + | chr7.1:16990488-16990507 | None:intergenic | 30.0% | |
| GCATGCATATTTGATATGTT+GGG | - | chr7.1:16988639-16988658 | MS.gene38799:intron | 30.0% | |
| TAAGTCAACAAAAGAAGTGA+AGG | - | chr7.1:16990304-16990323 | MS.gene38799:intron | 30.0% | |
| TAATTGTAGAAAAGGAGGTA+AGG | + | chr7.1:16989677-16989696 | None:intergenic | 30.0% | |
| TATTAGAAATCTTGGGAGAT+TGG | - | chr7.1:16990570-16990589 | MS.gene38799:CDS | 30.0% | |
| TGCATGCATATTTGATATGT+TGG | - | chr7.1:16988638-16988657 | MS.gene38799:intron | 30.0% | |
| TTGCTAAACTAGTAGAAGTA+AGG | - | chr7.1:16988721-16988740 | MS.gene38799:intron | 30.0% | |
| ! | AAATTCAAATGGGCAGTTTT+GGG | - | chr7.1:16990502-16990521 | MS.gene38799:CDS | 30.0% |
| ! | AAGTAAGTCTTTTAAGCATG+GGG | - | chr7.1:16988756-16988775 | MS.gene38799:intron | 30.0% |
| ! | ATCGTTTTCATAAGCTATTG+TGG | - | chr7.1:16988893-16988912 | MS.gene38799:intron | 30.0% |
| ! | CTAAGTAAGTCTTTTAAGCA+TGG | - | chr7.1:16988754-16988773 | MS.gene38799:intron | 30.0% |
| !!! | AGTCTTGTTTTCGATAAACA+TGG | - | chr7.1:16988369-16988388 | MS.gene38799:CDS | 30.0% |
| !!! | TTAATGGCTATTTTTTTCCG+AGG | - | chr7.1:16989260-16989279 | MS.gene38799:CDS | 30.0% |
| AAAACTTTGGATTGCATCAG+TGG | - | chr7.1:16990640-16990659 | MS.gene38799:CDS | 35.0% | |
| AAGCATGGGGTCTTAAAAAT+CGG | - | chr7.1:16988769-16988788 | MS.gene38799:intron | 35.0% | |
| AAGTCATTGGTGAAGTGAAA+GGG | + | chr7.1:16989574-16989593 | None:intergenic | 35.0% | |
| CAAAGTTAGAGCATATTTGC+GGG | - | chr7.1:16989419-16989438 | MS.gene38799:CDS | 35.0% | |
| CAACACTAAATACGAAGAAG+TGG | + | chr7.1:16988692-16988711 | None:intergenic | 35.0% | |
| CCAAAGTTAGAGCATATTTG+CGG | - | chr7.1:16989418-16989437 | MS.gene38799:CDS | 35.0% | |
| CTAGAAAGGTTACTACATTG+AGG | + | chr7.1:16988221-16988240 | None:intergenic | 35.0% | |
| CTAGTAGAAGTAAGGTTTGT+AGG | - | chr7.1:16988729-16988748 | MS.gene38799:intron | 35.0% | |
| TAGAGTCTGTTCAAGAGTTT+AGG | + | chr7.1:16990081-16990100 | None:intergenic | 35.0% | |
| TATATTGCTGATGCTTACCT+TGG | - | chr7.1:16989484-16989503 | MS.gene38799:CDS | 35.0% | |
| TCAGTGGAAATGCCTTATAT+TGG | - | chr7.1:16990656-16990675 | MS.gene38799:CDS | 35.0% | |
| TGAAACGTGAAAACACCAAA+TGG | + | chr7.1:16988503-16988522 | None:intergenic | 35.0% | |
| TTATCAAACCTTAGTCCTAG+TGG | + | chr7.1:16989448-16989467 | None:intergenic | 35.0% | |
| TTATCGAAAACAAGACTCTC+CGG | + | chr7.1:16988366-16988385 | None:intergenic | 35.0% | |
| TTCACTGATATCCAAGTCAT+TGG | + | chr7.1:16989587-16989606 | None:intergenic | 35.0% | |
| TTGCTTAAAGCAACACCATT+AGG | + | chr7.1:16990353-16990372 | None:intergenic | 35.0% | |
| TTGGATATCAGTGAAGATGA+AGG | - | chr7.1:16989592-16989611 | MS.gene38799:intron | 35.0% | |
| ! | AACCTTGTTGTACATATCCT+CGG | + | chr7.1:16989280-16989299 | None:intergenic | 35.0% |
| ! | AATACTTTTGCTGATCTTCC+AGG | - | chr7.1:16990458-16990477 | MS.gene38799:CDS | 35.0% |
| ! | ATTTTGCCTGCAAACAAAAG+TGG | + | chr7.1:16990234-16990253 | None:intergenic | 35.0% |
| ! | CCTTATTCTAAAAGGCAAGA+GGG | - | chr7.1:16989037-16989056 | MS.gene38799:intron | 35.0% |
| ! | CTGAAACCGTTTGAAACTAA+AGG | + | chr7.1:16989096-16989115 | None:intergenic | 35.0% |
| ! | GAAATTCAAATGGGCAGTTT+TGG | - | chr7.1:16990501-16990520 | MS.gene38799:CDS | 35.0% |
| ! | GTTTTCGATAAACATGGTGA+GGG | - | chr7.1:16988375-16988394 | MS.gene38799:CDS | 35.0% |
| ! | TCTCTGCCTTTAGTTTCAAA+CGG | - | chr7.1:16989087-16989106 | MS.gene38799:intron | 35.0% |
| ! | TGTTTTCGATAAACATGGTG+AGG | - | chr7.1:16988374-16988393 | MS.gene38799:CDS | 35.0% |
| !! | TTGTATGATTTTCAAGGTCG+AGG | - | chr7.1:16989377-16989396 | MS.gene38799:CDS | 35.0% |
| !!! | CCTCTTGCCTTTTAGAATAA+GGG | + | chr7.1:16989039-16989058 | None:intergenic | 35.0% |
| AAACGGGCCCTTATTCTAAA+AGG | - | chr7.1:16989029-16989048 | MS.gene38799:intron | 40.0% | |
| AAATCTTGGGAGATTGGCAA+GGG | - | chr7.1:16990576-16990595 | MS.gene38799:CDS | 40.0% | |
| AAGAAGTGGTCGATGAATTG+AGG | + | chr7.1:16988678-16988697 | None:intergenic | 40.0% | |
| AGCTTCTATTGCTAGTTGAG+TGG | + | chr7.1:16989542-16989561 | None:intergenic | 40.0% | |
| AGTCTGTTCAAGAGTTTAGG+AGG | + | chr7.1:16990078-16990097 | None:intergenic | 40.0% | |
| AGTGAAGTGGAAGAGAGAAA+TGG | - | chr7.1:16990617-16990636 | MS.gene38799:CDS | 40.0% | |
| CAACTAGCAATAGAAGCTGA+AGG | - | chr7.1:16989544-16989563 | MS.gene38799:intron | 40.0% | |
| CAAGTCATTGGTGAAGTGAA+AGG | + | chr7.1:16989575-16989594 | None:intergenic | 40.0% | |
| CAATGTGAACAGGTGAAAAG+AGG | + | chr7.1:16988284-16988303 | None:intergenic | 40.0% | |
| CACTTCACTGATGTTCTTCA+TGG | + | chr7.1:16990606-16990625 | None:intergenic | 40.0% | |
| CATGAAGAACATCAGTGAAG+TGG | - | chr7.1:16990604-16990623 | MS.gene38799:CDS | 40.0% | |
| CATGCAGTTTAACACTTTCG+AGG | + | chr7.1:16988624-16988643 | None:intergenic | 40.0% | |
| CCGCAAATATGCTCTAACTT+TGG | + | chr7.1:16989421-16989440 | None:intergenic | 40.0% | |
| CTATAAAGCTGAGTGGTGAA+GGG | - | chr7.1:16990543-16990562 | MS.gene38799:CDS | 40.0% | |
| CTTATATTGTCGGGAAAACC+TGG | + | chr7.1:16990479-16990498 | None:intergenic | 40.0% | |
| CTTTCACTTCACCAATGACT+TGG | - | chr7.1:16989573-16989592 | MS.gene38799:intron | 40.0% | |
| GTCTGTTCAAGAGTTTAGGA+GGG | + | chr7.1:16990077-16990096 | None:intergenic | 40.0% | |
| TACTACATTGAGGATGTCCT+TGG | + | chr7.1:16988211-16988230 | None:intergenic | 40.0% | |
| TCTGTTCAAGAGTTTAGGAG+GGG | + | chr7.1:16990076-16990095 | None:intergenic | 40.0% | |
| TGTTCACATTGCTGGATCAA+AGG | - | chr7.1:16988293-16988312 | MS.gene38799:CDS | 40.0% | |
| TTCCGAGGATATGTACAACA+AGG | - | chr7.1:16989275-16989294 | MS.gene38799:CDS | 40.0% | |
| TTTGATCCAGCAATGTGAAC+AGG | + | chr7.1:16988294-16988313 | None:intergenic | 40.0% | |
| TTTGTGAATGCAAGCAAGCA+TGG | - | chr7.1:16989121-16989140 | MS.gene38799:intron | 40.0% | |
| ! | AAGGGTATGATTGGGAGATA+AGG | - | chr7.1:16989815-16989834 | MS.gene38799:intron | 40.0% |
| ! | ACAGGTGAAAAGAGGTTTTG+TGG | + | chr7.1:16988276-16988295 | None:intergenic | 40.0% |
| ! | CAGGTTTTCCCGACAATATA+AGG | - | chr7.1:16990477-16990496 | MS.gene38799:CDS | 40.0% |
| ! | CCCTTATTCTAAAAGGCAAG+AGG | - | chr7.1:16989036-16989055 | MS.gene38799:intron | 40.0% |
| ! | TTGCTGTCACGAGTTCTAAT+AGG | - | chr7.1:16988466-16988485 | MS.gene38799:CDS | 40.0% |
| ! | TTTTCACCTGTTCACATTGC+TGG | - | chr7.1:16988285-16988304 | MS.gene38799:CDS | 40.0% |
| !! | AGAGGACTTGCTTTTCCTAA+TGG | - | chr7.1:16990335-16990354 | MS.gene38799:intron | 40.0% |
| !! | CAGGTGAAAAGAGGTTTTGT+GGG | + | chr7.1:16988275-16988294 | None:intergenic | 40.0% |
| !! | GAAGTGAAGGTCTTGTTAAG+AGG | - | chr7.1:16990317-16990336 | MS.gene38799:intron | 40.0% |
| !! | GGTGTTGCTTTAAGCAAAGA+TGG | - | chr7.1:16990356-16990375 | MS.gene38799:intron | 40.0% |
| !!! | CCCTCTTGCCTTTTAGAATA+AGG | + | chr7.1:16989040-16989059 | None:intergenic | 40.0% |
| !!! | GTATTGACTTTGCCAGCTTT+TGG | + | chr7.1:16990443-16990462 | None:intergenic | 40.0% |
| ACTGCAGAATTCTTCGGCTT+TGG | - | chr7.1:16990408-16990427 | MS.gene38799:intron | 45.0% | |
| AGTTAGAGCATATTTGCGGG+AGG | - | chr7.1:16989422-16989441 | MS.gene38799:CDS | 45.0% | |
| CAAGCACAGTCTATCAGAGA+AGG | - | chr7.1:16989635-16989654 | MS.gene38799:intron | 45.0% | |
| CCTCGAACTGCAGAATTCTT+CGG | - | chr7.1:16990402-16990421 | MS.gene38799:intron | 45.0% | |
| GAAATCTTGGGAGATTGGCA+AGG | - | chr7.1:16990575-16990594 | MS.gene38799:CDS | 45.0% | |
| GCTATAAAGCTGAGTGGTGA+AGG | - | chr7.1:16990542-16990561 | MS.gene38799:CDS | 45.0% | |
| TACCTTGGCCTCAATGTAGT+GGG | - | chr7.1:16989499-16989518 | MS.gene38799:intron | 45.0% | |
| TCAGCAGCTATAAAGCTGAG+TGG | - | chr7.1:16990536-16990555 | MS.gene38799:CDS | 45.0% | |
| TTACCTTGGCCTCAATGTAG+TGG | - | chr7.1:16989498-16989517 | MS.gene38799:intron | 45.0% | |
| TTCTTAGTGGAGACGCAACT+GGG | - | chr7.1:16990264-16990283 | MS.gene38799:intron | 45.0% | |
| ! | TCAATGTAGTGGGACCTACT+GGG | - | chr7.1:16989509-16989528 | MS.gene38799:intron | 45.0% |
| ! | TGCTCTAACTTTGGTGCGAA+TGG | + | chr7.1:16989412-16989431 | None:intergenic | 45.0% |
| !! | GAGGTTTTGTGGGTTGAATG+AGG | + | chr7.1:16988265-16988284 | None:intergenic | 45.0% |
| !! | GCATGAGAAGAGTGCTAGAA+AGG | + | chr7.1:16988235-16988254 | None:intergenic | 45.0% |
| !!! | GGATGGTCGGATTTTGAAGT+GGG | - | chr7.1:16988416-16988435 | MS.gene38799:CDS | 45.0% |
| !!! | TGTTGGCCACTTTTGTTTGC+AGG | - | chr7.1:16990225-16990244 | MS.gene38799:intron | 45.0% |
| AGTTTAGGAGGGGAGAGAAG+AGG | + | chr7.1:16990066-16990085 | None:intergenic | 50.0% | |
| CAGTAGGTCCCACTACATTG+AGG | + | chr7.1:16989510-16989529 | None:intergenic | 50.0% | |
| CCGAAGAATTCTGCAGTTCG+AGG | + | chr7.1:16990405-16990424 | None:intergenic | 50.0% | |
| CTTCTTAGTGGAGACGCAAC+TGG | - | chr7.1:16990263-16990282 | MS.gene38799:intron | 50.0% | |
| ! | AATGTAGTGGGACCTACTGG+GGG | - | chr7.1:16989511-16989530 | MS.gene38799:intron | 50.0% |
| ! | ATTCTTCGGCTTTGGCTTCG+TGG | - | chr7.1:16990416-16990435 | MS.gene38799:CDS | 50.0% |
| ! | CAATGTAGTGGGACCTACTG+GGG | - | chr7.1:16989510-16989529 | MS.gene38799:intron | 50.0% |
| ! | CTCAATGTAGTGGGACCTAC+TGG | - | chr7.1:16989508-16989527 | MS.gene38799:intron | 50.0% |
| !! | CGGATGGTCGGATTTTGAAG+TGG | - | chr7.1:16988415-16988434 | MS.gene38799:CDS | 50.0% |
| !!! | GATTTTGAAGTGGGAGGGGA+AGG | - | chr7.1:16988425-16988444 | MS.gene38799:CDS | 50.0% |
| !!! | GGTCGGATTTTGAAGTGGGA+GGG | - | chr7.1:16988420-16988439 | MS.gene38799:CDS | 50.0% |
| !!! | GTCGGATTTTGAAGTGGGAG+GGG | - | chr7.1:16988421-16988440 | MS.gene38799:CDS | 50.0% |
| !!! | TGGTCGGATTTTGAAGTGGG+AGG | - | chr7.1:16988419-16988438 | MS.gene38799:CDS | 50.0% |
| AACAAGACTCTCCGGTCCGA+CGG | + | chr7.1:16988358-16988377 | None:intergenic | 55.0% | |
| CATATTTGCGGGAGGCCACT+AGG | - | chr7.1:16989430-16989449 | MS.gene38799:CDS | 55.0% | |
| GTCCCACTACATTGAGGCCA+AGG | + | chr7.1:16989504-16989523 | None:intergenic | 55.0% | |
| TGAGTGGCTAAACCCCCAGT+AGG | + | chr7.1:16989526-16989545 | None:intergenic | 55.0% | |
| TGGCTTCGTGGACCAAAAGC+TGG | - | chr7.1:16990428-16990447 | MS.gene38799:CDS | 55.0% | |
| ! | CGTGGAGTATCTGAGCAGCA+TGG | + | chr7.1:16988326-16988345 | None:intergenic | 55.0% |
| ! | GGAGTATCTGAGCAGCATGG+AGG | + | chr7.1:16988323-16988342 | None:intergenic | 55.0% |
| AAGTGGGAGGGGAAGGAACG+TGG | - | chr7.1:16988432-16988451 | MS.gene38799:CDS | 60.0% | |
| CATGGTGAGGGTCCGTACAC+CGG | - | chr7.1:16988387-16988406 | MS.gene38799:CDS | 60.0% | |
| CTCCACGTCACCAAAGCCGT+CGG | - | chr7.1:16988339-16988358 | MS.gene38799:CDS | 60.0% | |
| AATCCGACCATCCGCCACGC+CGG | + | chr7.1:16988409-16988428 | None:intergenic | 65.0% | |
| ACTCTCCGGTCCGACGGCTT+TGG | + | chr7.1:16988352-16988371 | None:intergenic | 65.0% | |
| CGTCACCAAAGCCGTCGGAC+CGG | - | chr7.1:16988344-16988363 | MS.gene38799:CDS | 65.0% | |
| GCGGGAGGCCACTAGGACTA+AGG | - | chr7.1:16989437-16989456 | MS.gene38799:CDS | 65.0% | |
| GGGAGGGGAAGGAACGTGGT+TGG | - | chr7.1:16988436-16988455 | MS.gene38799:CDS | 65.0% | |
| !! | GTCCGACGGCTTTGGTGACG+TGG | + | chr7.1:16988344-16988363 | None:intergenic | 65.0% |
| CCATCCGCCACGCCGGTGTA+CGG | + | chr7.1:16988402-16988421 | None:intergenic | 70.0% | |
| TGAGGGTCCGTACACCGGCG+TGG | - | chr7.1:16988392-16988411 | MS.gene38799:CDS | 70.0% | |
| !! | ACACCGGCGTGGCGGATGGT+CGG | - | chr7.1:16988403-16988422 | MS.gene38799:CDS | 70.0% |
| GGGTCCGTACACCGGCGTGG+CGG | - | chr7.1:16988395-16988414 | MS.gene38799:CDS | 75.0% | |
| ! | CCGTACACCGGCGTGGCGGA+TGG | - | chr7.1:16988399-16988418 | MS.gene38799:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16988201 | 16990700 | 16988201 | ID=MS.gene38799 |
| chr7.1 | mRNA | 16988201 | 16990700 | 16988201 | ID=MS.gene38799.t1;Parent=MS.gene38799 |
| chr7.1 | exon | 16990414 | 16990700 | 16990414 | ID=MS.gene38799.t1.exon1;Parent=MS.gene38799.t1 |
| chr7.1 | CDS | 16990414 | 16990700 | 16990414 | ID=cds.MS.gene38799.t1;Parent=MS.gene38799.t1 |
| chr7.1 | exon | 16989245 | 16989508 | 16989245 | ID=MS.gene38799.t1.exon2;Parent=MS.gene38799.t1 |
| chr7.1 | CDS | 16989245 | 16989508 | 16989245 | ID=cds.MS.gene38799.t1;Parent=MS.gene38799.t1 |
| chr7.1 | exon | 16988201 | 16988654 | 16988201 | ID=MS.gene38799.t1.exon3;Parent=MS.gene38799.t1 |
| chr7.1 | CDS | 16988201 | 16988654 | 16988201 | ID=cds.MS.gene38799.t1;Parent=MS.gene38799.t1 |
| Gene Sequence |
| Protein sequence |
