Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60216.t1 | RHN58533.1 | 97.8 | 183 | 1 | 1 | 1 | 183 | 309 | 488 | 4.70E-93 | 350.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60216.t1 | Q56XG6 | 92.3 | 183 | 11 | 1 | 1 | 183 | 248 | 427 | 2.1e-89 | 329.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60216.t1 | A0A072UHT1 | 97.8 | 183 | 1 | 1 | 1 | 183 | 325 | 504 | 3.4e-93 | 350.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene60216 | -0.820218 | 7.71E-53 | -1.69E-46 |
| MS.gene049580 | MS.gene60216 | 0.807695 | 4.46E-50 | -1.69E-46 |
| MS.gene050277 | MS.gene60216 | 0.802579 | 5.25E-49 | -1.69E-46 |
| MS.gene050320 | MS.gene60216 | 0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene050752 | MS.gene60216 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene60216 | 0.80587 | 1.08E-49 | -1.69E-46 |
| MS.gene050955 | MS.gene60216 | 0.801627 | 8.24E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene60216 | 0.827827 | 1.26E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene60216 | 0.815002 | 1.16E-51 | -1.69E-46 |
| MS.gene051597 | MS.gene60216 | 0.813141 | 2.97E-51 | -1.69E-46 |
| MS.gene05188 | MS.gene60216 | 0.877361 | 6.69E-69 | -1.69E-46 |
| MS.gene051902 | MS.gene60216 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene051903 | MS.gene60216 | 0.83027 | 3.23E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene60216 | 0.859768 | 3.29E-63 | -1.69E-46 |
| MS.gene052818 | MS.gene60216 | -0.807191 | 5.70E-50 | -1.69E-46 |
| MS.gene052947 | MS.gene60216 | 0.824054 | 9.94E-54 | -1.69E-46 |
| MS.gene053058 | MS.gene60216 | 0.832552 | 8.86E-56 | -1.69E-46 |
| MS.gene053401 | MS.gene60216 | 0.828163 | 1.05E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene60216 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene60216 | 0.810783 | 9.71E-51 | -1.69E-46 |
| MS.gene054413 | MS.gene60216 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene05469 | MS.gene60216 | 0.806637 | 7.47E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene60216 | 0.831145 | 1.97E-55 | -1.69E-46 |
| MS.gene055603 | MS.gene60216 | 0.807559 | 4.76E-50 | -1.69E-46 |
| MS.gene056091 | MS.gene60216 | 0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene056403 | MS.gene60216 | 0.841782 | 3.86E-58 | -1.69E-46 |
| MS.gene056605 | MS.gene60216 | 0.8363 | 1.01E-56 | -1.69E-46 |
| MS.gene056631 | MS.gene60216 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene05689 | MS.gene60216 | 0.829231 | 5.78E-55 | -1.69E-46 |
| MS.gene056986 | MS.gene60216 | 0.888425 | 5.97E-73 | -1.69E-46 |
| MS.gene057094 | MS.gene60216 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene60216 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene60216 | 0.819437 | 1.16E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene60216 | 0.842366 | 2.70E-58 | -1.69E-46 |
| MS.gene057890 | MS.gene60216 | -0.807002 | 6.25E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene60216 | 0.838519 | 2.74E-57 | -1.69E-46 |
| MS.gene058238 | MS.gene60216 | 0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene058498 | MS.gene60216 | 0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene60216 | 0.867495 | 1.31E-65 | -1.69E-46 |
| MS.gene05985 | MS.gene60216 | -0.828046 | 1.12E-54 | -1.69E-46 |
| MS.gene059901 | MS.gene60216 | -0.836436 | 9.37E-57 | -1.69E-46 |
| MS.gene059935 | MS.gene60216 | 0.843377 | 1.45E-58 | -1.69E-46 |
| MS.gene06001 | MS.gene60216 | 0.811827 | 5.76E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene60216 | 0.878621 | 2.42E-69 | -1.69E-46 |
| MS.gene060365 | MS.gene60216 | 0.800649 | 1.31E-48 | -1.69E-46 |
| MS.gene060429 | MS.gene60216 | 0.807336 | 5.31E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene60216 | 0.823508 | 1.33E-53 | -1.69E-46 |
| MS.gene060763 | MS.gene60216 | 0.873926 | 1.01E-67 | -1.69E-46 |
| MS.gene060830 | MS.gene60216 | 0.873067 | 1.96E-67 | -1.69E-46 |
| MS.gene060935 | MS.gene60216 | 0.80493 | 1.71E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene60216 | 0.812778 | 3.57E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60216.t1 | MTR_4g010565 | 97.814 | 183 | 1 | 1 | 1 | 183 | 325 | 504 | 7.58e-126 | 363 |
| MS.gene60216.t1 | MTR_1g012420 | 90.710 | 183 | 14 | 1 | 1 | 183 | 248 | 427 | 3.56e-116 | 336 |
| MS.gene60216.t1 | MTR_3g107420 | 88.525 | 183 | 18 | 1 | 1 | 183 | 248 | 427 | 4.14e-115 | 333 |
| MS.gene60216.t1 | MTR_7g076820 | 40.936 | 171 | 97 | 2 | 10 | 180 | 355 | 521 | 1.80e-34 | 127 |
| MS.gene60216.t1 | MTR_7g076830 | 40.351 | 171 | 98 | 2 | 10 | 180 | 348 | 514 | 2.03e-34 | 127 |
| MS.gene60216.t1 | MTR_7g076800 | 40.351 | 171 | 98 | 2 | 10 | 180 | 346 | 512 | 2.57e-34 | 126 |
| MS.gene60216.t1 | MTR_2g438110 | 36.585 | 164 | 99 | 3 | 10 | 172 | 240 | 399 | 1.38e-30 | 115 |
| MS.gene60216.t1 | MTR_2g039960 | 37.725 | 167 | 99 | 3 | 10 | 175 | 247 | 409 | 1.80e-30 | 115 |
| MS.gene60216.t1 | MTR_8g018400 | 37.126 | 167 | 100 | 3 | 10 | 175 | 247 | 409 | 2.72e-30 | 114 |
| MS.gene60216.t1 | MTR_2g099620 | 37.126 | 167 | 100 | 3 | 10 | 175 | 231 | 393 | 1.41e-29 | 112 |
| MS.gene60216.t1 | MTR_2g099620 | 37.126 | 167 | 100 | 3 | 10 | 175 | 247 | 409 | 1.80e-29 | 112 |
| MS.gene60216.t1 | MTR_4g125970 | 36.527 | 167 | 101 | 3 | 10 | 175 | 247 | 409 | 2.40e-29 | 112 |
| MS.gene60216.t1 | MTR_4g125970 | 36.527 | 167 | 101 | 3 | 10 | 175 | 264 | 426 | 3.41e-29 | 112 |
| MS.gene60216.t1 | MTR_4g134170 | 42.537 | 134 | 74 | 1 | 16 | 149 | 524 | 654 | 1.00e-26 | 106 |
| MS.gene60216.t1 | MTR_6g005320 | 41.791 | 134 | 73 | 2 | 16 | 149 | 486 | 614 | 8.57e-25 | 100 |
| MS.gene60216.t1 | MTR_2g100230 | 38.129 | 139 | 82 | 2 | 14 | 151 | 312 | 447 | 2.39e-24 | 99.0 |
| MS.gene60216.t1 | MTR_3g083690 | 42.424 | 132 | 66 | 2 | 23 | 147 | 379 | 507 | 7.06e-24 | 98.2 |
| MS.gene60216.t1 | MTR_7g100820 | 48.077 | 104 | 51 | 1 | 44 | 147 | 375 | 475 | 2.77e-23 | 96.3 |
| MS.gene60216.t1 | MTR_1g054630 | 41.538 | 130 | 66 | 2 | 25 | 147 | 389 | 515 | 8.59e-23 | 95.1 |
| MS.gene60216.t1 | MTR_4g049910 | 32.258 | 186 | 109 | 5 | 2 | 174 | 253 | 434 | 2.02e-22 | 93.6 |
| MS.gene60216.t1 | MTR_4g114120 | 40.288 | 139 | 76 | 2 | 16 | 150 | 372 | 507 | 6.04e-22 | 92.4 |
| MS.gene60216.t1 | MTR_4g105100 | 34.959 | 123 | 77 | 1 | 29 | 151 | 434 | 553 | 9.68e-22 | 92.0 |
| MS.gene60216.t1 | MTR_1g061970 | 33.562 | 146 | 80 | 2 | 43 | 174 | 333 | 475 | 1.05e-20 | 88.6 |
| MS.gene60216.t1 | MTR_8g018370 | 32.716 | 162 | 104 | 3 | 12 | 172 | 160 | 317 | 1.52e-20 | 87.0 |
| MS.gene60216.t1 | MTR_2g032630 | 32.075 | 159 | 99 | 3 | 1 | 153 | 698 | 853 | 3.35e-20 | 87.8 |
| MS.gene60216.t1 | MTR_3g467550 | 34.532 | 139 | 79 | 2 | 18 | 147 | 337 | 472 | 1.29e-19 | 85.9 |
| MS.gene60216.t1 | MTR_3g467550 | 34.532 | 139 | 79 | 2 | 18 | 147 | 306 | 441 | 1.38e-19 | 85.5 |
| MS.gene60216.t1 | MTR_1g095810 | 38.679 | 106 | 62 | 1 | 44 | 149 | 398 | 500 | 1.84e-19 | 85.5 |
| MS.gene60216.t1 | MTR_6g005550 | 33.835 | 133 | 83 | 3 | 16 | 147 | 383 | 511 | 3.78e-19 | 84.3 |
| MS.gene60216.t1 | MTR_2g007000 | 37.383 | 107 | 64 | 1 | 43 | 149 | 752 | 855 | 1.60e-18 | 82.8 |
| MS.gene60216.t1 | MTR_1g026830 | 34.375 | 128 | 73 | 3 | 44 | 171 | 400 | 516 | 6.34e-18 | 80.9 |
| MS.gene60216.t1 | MTR_7g056830 | 32.934 | 167 | 95 | 3 | 12 | 173 | 221 | 375 | 8.93e-18 | 80.1 |
| MS.gene60216.t1 | MTR_2g066050 | 33.077 | 130 | 83 | 2 | 36 | 165 | 291 | 416 | 9.93e-18 | 80.1 |
| MS.gene60216.t1 | MTR_6g082080 | 32.934 | 167 | 95 | 3 | 12 | 173 | 221 | 375 | 1.20e-17 | 79.7 |
| MS.gene60216.t1 | MTR_5g027840 | 36.111 | 108 | 66 | 1 | 42 | 149 | 353 | 457 | 1.73e-16 | 76.6 |
| MS.gene60216.t1 | MTR_5g090120 | 36.207 | 116 | 69 | 3 | 65 | 179 | 348 | 459 | 3.15e-16 | 75.9 |
| MS.gene60216.t1 | MTR_7g057250 | 27.273 | 165 | 114 | 2 | 18 | 182 | 452 | 610 | 3.59e-16 | 75.9 |
| MS.gene60216.t1 | MTR_0427s0010 | 30.534 | 131 | 74 | 2 | 59 | 175 | 83 | 210 | 6.59e-16 | 73.2 |
| MS.gene60216.t1 | MTR_3g449250 | 31.343 | 134 | 81 | 4 | 43 | 173 | 336 | 461 | 5.25e-15 | 72.4 |
| MS.gene60216.t1 | MTR_3g449250 | 31.111 | 135 | 82 | 4 | 42 | 173 | 335 | 461 | 5.73e-15 | 72.4 |
| MS.gene60216.t1 | MTR_4g059460 | 28.671 | 143 | 93 | 4 | 13 | 151 | 331 | 468 | 5.40e-14 | 69.7 |
| MS.gene60216.t1 | MTR_7g109720 | 31.008 | 129 | 81 | 3 | 26 | 149 | 457 | 582 | 6.79e-14 | 69.3 |
| MS.gene60216.t1 | MTR_6g033070 | 35.556 | 135 | 81 | 3 | 18 | 149 | 360 | 491 | 6.90e-14 | 69.3 |
| MS.gene60216.t1 | MTR_3g071620 | 28.758 | 153 | 102 | 2 | 8 | 156 | 243 | 392 | 8.39e-14 | 68.9 |
| MS.gene60216.t1 | MTR_1g046570 | 26.590 | 173 | 118 | 6 | 10 | 176 | 226 | 395 | 1.01e-13 | 68.6 |
| MS.gene60216.t1 | MTR_2g043360 | 27.273 | 143 | 95 | 4 | 13 | 151 | 210 | 347 | 1.76e-13 | 68.2 |
| MS.gene60216.t1 | MTR_2g043360 | 27.273 | 143 | 95 | 4 | 13 | 151 | 328 | 465 | 2.35e-13 | 67.8 |
| MS.gene60216.t1 | MTR_2g041140 | 32.258 | 124 | 76 | 3 | 42 | 163 | 387 | 504 | 3.03e-13 | 67.4 |
| MS.gene60216.t1 | MTR_4g079320 | 35.780 | 109 | 65 | 3 | 43 | 150 | 263 | 367 | 3.09e-13 | 67.4 |
| MS.gene60216.t1 | MTR_1g022305 | 41.667 | 84 | 43 | 2 | 66 | 149 | 212 | 289 | 4.28e-13 | 67.0 |
| MS.gene60216.t1 | MTR_6g056080 | 35.922 | 103 | 59 | 2 | 43 | 145 | 358 | 453 | 4.44e-13 | 67.0 |
| MS.gene60216.t1 | MTR_3g049990 | 32.258 | 124 | 76 | 3 | 42 | 163 | 397 | 514 | 7.97e-13 | 66.2 |
| MS.gene60216.t1 | MTR_2g063080 | 27.500 | 160 | 107 | 4 | 12 | 168 | 376 | 529 | 1.49e-12 | 65.5 |
| MS.gene60216.t1 | MTR_2g055850 | 30.000 | 150 | 98 | 3 | 3 | 148 | 296 | 442 | 1.65e-12 | 65.1 |
| MS.gene60216.t1 | MTR_5g069330 | 35.345 | 116 | 67 | 3 | 46 | 159 | 251 | 360 | 2.10e-12 | 64.7 |
| MS.gene60216.t1 | MTR_5g069330 | 35.345 | 116 | 67 | 3 | 46 | 159 | 255 | 364 | 2.30e-12 | 64.7 |
| MS.gene60216.t1 | MTR_1g102410 | 33.981 | 103 | 61 | 2 | 43 | 145 | 315 | 410 | 5.46e-12 | 63.9 |
| MS.gene60216.t1 | MTR_5g077690 | 33.913 | 115 | 76 | 0 | 35 | 149 | 327 | 441 | 1.46e-11 | 62.4 |
| MS.gene60216.t1 | MTR_4g112320 | 29.221 | 154 | 94 | 5 | 3 | 148 | 121 | 267 | 9.17e-11 | 60.1 |
| MS.gene60216.t1 | MTR_4g112340 | 29.221 | 154 | 94 | 5 | 3 | 148 | 303 | 449 | 9.86e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60216.t1 | AT5G11170 | 92.350 | 183 | 11 | 1 | 1 | 183 | 165 | 344 | 7.71e-120 | 343 |
| MS.gene60216.t1 | AT5G11170 | 92.350 | 183 | 11 | 1 | 1 | 183 | 248 | 427 | 3.58e-118 | 341 |
| MS.gene60216.t1 | AT5G11200 | 92.350 | 183 | 11 | 1 | 1 | 183 | 248 | 427 | 3.58e-118 | 341 |
| MS.gene60216.t1 | AT5G11200 | 92.350 | 183 | 11 | 1 | 1 | 183 | 307 | 486 | 1.01e-117 | 342 |
| MS.gene60216.t1 | AT5G11200 | 92.350 | 183 | 11 | 1 | 1 | 183 | 289 | 468 | 2.40e-117 | 340 |
| MS.gene60216.t1 | AT4G00660 | 40.936 | 171 | 97 | 2 | 10 | 180 | 337 | 503 | 3.71e-35 | 129 |
| MS.gene60216.t1 | AT4G00660 | 40.936 | 171 | 97 | 2 | 10 | 180 | 337 | 503 | 3.71e-35 | 129 |
| MS.gene60216.t1 | AT3G61240 | 40.351 | 171 | 98 | 2 | 10 | 180 | 330 | 496 | 1.55e-34 | 127 |
| MS.gene60216.t1 | AT3G61240 | 40.351 | 171 | 98 | 2 | 10 | 180 | 330 | 496 | 1.55e-34 | 127 |
| MS.gene60216.t1 | AT2G45810 | 40.351 | 171 | 98 | 2 | 10 | 180 | 360 | 526 | 3.87e-34 | 126 |
| MS.gene60216.t1 | AT3G19760 | 37.195 | 164 | 98 | 3 | 10 | 172 | 242 | 401 | 2.52e-31 | 117 |
| MS.gene60216.t1 | AT1G51380 | 36.585 | 164 | 99 | 3 | 10 | 172 | 229 | 388 | 9.74e-30 | 112 |
| MS.gene60216.t1 | AT3G13920 | 36.527 | 167 | 101 | 3 | 10 | 175 | 236 | 398 | 2.63e-29 | 112 |
| MS.gene60216.t1 | AT3G13920 | 36.527 | 167 | 101 | 3 | 10 | 175 | 241 | 403 | 2.65e-29 | 112 |
| MS.gene60216.t1 | AT3G13920 | 36.527 | 167 | 101 | 3 | 10 | 175 | 246 | 408 | 3.12e-29 | 111 |
| MS.gene60216.t1 | AT1G72730 | 35.928 | 167 | 102 | 3 | 10 | 175 | 248 | 410 | 3.22e-29 | 111 |
| MS.gene60216.t1 | AT1G54270 | 36.527 | 167 | 101 | 3 | 10 | 175 | 241 | 403 | 8.12e-29 | 110 |
| MS.gene60216.t1 | AT1G54270 | 36.527 | 167 | 101 | 3 | 10 | 175 | 246 | 408 | 8.34e-29 | 110 |
| MS.gene60216.t1 | AT3G13920 | 38.298 | 141 | 83 | 2 | 10 | 149 | 246 | 383 | 3.83e-26 | 103 |
| MS.gene60216.t1 | AT3G13920 | 38.298 | 141 | 83 | 2 | 10 | 149 | 250 | 387 | 4.14e-26 | 103 |
| MS.gene60216.t1 | AT3G53110 | 36.054 | 147 | 83 | 3 | 33 | 171 | 332 | 475 | 1.67e-25 | 102 |
| MS.gene60216.t1 | AT2G33730 | 40.141 | 142 | 81 | 2 | 16 | 157 | 551 | 688 | 1.70e-25 | 102 |
| MS.gene60216.t1 | AT1G55150 | 37.692 | 130 | 77 | 2 | 23 | 151 | 325 | 451 | 1.22e-22 | 94.4 |
| MS.gene60216.t1 | AT1G55150 | 37.692 | 130 | 77 | 2 | 23 | 151 | 350 | 476 | 1.61e-22 | 94.0 |
| MS.gene60216.t1 | AT5G63120 | 36.800 | 125 | 75 | 2 | 26 | 149 | 394 | 515 | 2.83e-22 | 93.6 |
| MS.gene60216.t1 | AT2G42520 | 34.132 | 167 | 99 | 3 | 16 | 175 | 386 | 548 | 6.72e-22 | 92.4 |
| MS.gene60216.t1 | AT2G42520 | 34.132 | 167 | 99 | 3 | 16 | 175 | 386 | 548 | 6.72e-22 | 92.4 |
| MS.gene60216.t1 | AT2G42520 | 34.132 | 167 | 99 | 3 | 16 | 175 | 386 | 548 | 6.72e-22 | 92.4 |
| MS.gene60216.t1 | AT3G58510 | 34.177 | 158 | 95 | 3 | 23 | 175 | 385 | 538 | 7.61e-22 | 92.4 |
| MS.gene60216.t1 | AT3G58510 | 34.177 | 158 | 95 | 3 | 23 | 175 | 385 | 538 | 7.61e-22 | 92.4 |
| MS.gene60216.t1 | AT3G58510 | 34.177 | 158 | 95 | 3 | 23 | 175 | 385 | 538 | 7.61e-22 | 92.4 |
| MS.gene60216.t1 | AT3G58570 | 38.849 | 139 | 75 | 3 | 16 | 147 | 373 | 508 | 3.54e-21 | 90.5 |
| MS.gene60216.t1 | AT3G09720 | 45.192 | 104 | 54 | 1 | 44 | 147 | 383 | 483 | 4.10e-21 | 90.1 |
| MS.gene60216.t1 | AT3G09720 | 45.192 | 104 | 54 | 1 | 44 | 147 | 383 | 483 | 4.10e-21 | 90.1 |
| MS.gene60216.t1 | AT1G28180 | 37.143 | 140 | 83 | 3 | 12 | 149 | 187 | 323 | 4.71e-21 | 89.0 |
| MS.gene60216.t1 | AT3G06480 | 34.074 | 135 | 86 | 1 | 15 | 149 | 653 | 784 | 3.64e-20 | 87.4 |
| MS.gene60216.t1 | AT1G31970 | 35.971 | 139 | 83 | 2 | 14 | 149 | 336 | 471 | 3.04e-19 | 84.7 |
| MS.gene60216.t1 | AT5G51280 | 37.736 | 106 | 63 | 1 | 44 | 149 | 400 | 502 | 5.25e-19 | 84.0 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 758 | 881 | 5.32e-19 | 84.3 |
| MS.gene60216.t1 | AT3G01540 | 32.298 | 161 | 103 | 4 | 16 | 175 | 377 | 532 | 6.26e-19 | 84.0 |
| MS.gene60216.t1 | AT3G01540 | 32.298 | 161 | 103 | 4 | 16 | 175 | 377 | 532 | 6.45e-19 | 84.0 |
| MS.gene60216.t1 | AT3G01540 | 32.298 | 161 | 103 | 4 | 16 | 175 | 377 | 532 | 6.45e-19 | 84.0 |
| MS.gene60216.t1 | AT3G01540 | 32.298 | 161 | 103 | 4 | 16 | 175 | 377 | 532 | 6.45e-19 | 84.0 |
| MS.gene60216.t1 | AT1G20920 | 33.594 | 128 | 77 | 3 | 26 | 149 | 420 | 543 | 7.24e-19 | 84.0 |
| MS.gene60216.t1 | AT1G16280 | 33.333 | 153 | 95 | 3 | 12 | 161 | 270 | 418 | 1.04e-18 | 83.2 |
| MS.gene60216.t1 | AT4G33370 | 37.736 | 106 | 63 | 1 | 44 | 149 | 351 | 453 | 1.13e-18 | 83.2 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 391 | 508 | 3.40e-18 | 81.6 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 391 | 508 | 3.43e-18 | 81.6 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 399 | 516 | 4.05e-18 | 81.6 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 459 | 576 | 4.91e-18 | 81.3 |
| MS.gene60216.t1 | AT3G16840 | 31.515 | 165 | 107 | 3 | 18 | 182 | 479 | 637 | 5.14e-18 | 81.3 |
| MS.gene60216.t1 | AT3G16840 | 31.515 | 165 | 107 | 3 | 18 | 182 | 480 | 638 | 5.39e-18 | 81.3 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 260 | 377 | 6.01e-18 | 80.9 |
| MS.gene60216.t1 | AT5G14610 | 35.246 | 122 | 74 | 3 | 27 | 147 | 260 | 377 | 6.01e-18 | 80.9 |
| MS.gene60216.t1 | AT5G60990 | 32.335 | 167 | 96 | 3 | 12 | 173 | 231 | 385 | 3.06e-17 | 79.0 |
| MS.gene60216.t1 | AT5G26742 | 31.293 | 147 | 98 | 1 | 5 | 151 | 314 | 457 | 2.28e-16 | 76.6 |
| MS.gene60216.t1 | AT5G26742 | 31.293 | 147 | 98 | 1 | 5 | 151 | 314 | 457 | 2.28e-16 | 76.6 |
| MS.gene60216.t1 | AT3G22330 | 32.824 | 131 | 83 | 3 | 42 | 172 | 350 | 475 | 2.48e-16 | 76.3 |
| MS.gene60216.t1 | AT5G26742 | 31.293 | 147 | 98 | 1 | 5 | 151 | 221 | 364 | 2.54e-16 | 76.3 |
| MS.gene60216.t1 | AT4G15850 | 36.975 | 119 | 69 | 2 | 35 | 150 | 329 | 444 | 1.90e-15 | 73.9 |
| MS.gene60216.t1 | AT2G47330 | 33.333 | 129 | 78 | 3 | 26 | 149 | 454 | 579 | 2.71e-15 | 73.6 |
| MS.gene60216.t1 | AT3G22310 | 35.922 | 103 | 62 | 2 | 70 | 172 | 389 | 487 | 2.89e-15 | 73.2 |
| MS.gene60216.t1 | AT3G22310 | 35.922 | 103 | 62 | 2 | 70 | 172 | 389 | 487 | 2.91e-15 | 73.2 |
| MS.gene60216.t1 | AT4G16630 | 32.847 | 137 | 82 | 4 | 42 | 174 | 413 | 543 | 7.39e-15 | 72.0 |
| MS.gene60216.t1 | AT2G40700 | 37.363 | 91 | 52 | 2 | 58 | 148 | 369 | 454 | 3.31e-14 | 70.1 |
| MS.gene60216.t1 | AT5G62190 | 32.394 | 142 | 87 | 3 | 42 | 181 | 351 | 485 | 5.72e-14 | 69.7 |
| MS.gene60216.t1 | AT1G77030 | 37.037 | 108 | 63 | 3 | 43 | 149 | 273 | 376 | 8.58e-14 | 68.9 |
| MS.gene60216.t1 | AT4G09730 | 31.973 | 147 | 87 | 5 | 12 | 149 | 334 | 476 | 1.63e-13 | 68.2 |
| MS.gene60216.t1 | AT3G09620 | 35.455 | 110 | 65 | 1 | 40 | 149 | 617 | 720 | 2.02e-13 | 68.2 |
| MS.gene60216.t1 | AT3G09620 | 35.455 | 110 | 65 | 1 | 40 | 149 | 616 | 719 | 2.05e-13 | 68.2 |
| MS.gene60216.t1 | AT1G71370 | 29.412 | 153 | 100 | 3 | 1 | 148 | 224 | 373 | 1.36e-12 | 65.5 |
| MS.gene60216.t1 | AT3G18600 | 33.333 | 144 | 86 | 6 | 6 | 145 | 299 | 436 | 2.42e-12 | 64.7 |
| MS.gene60216.t1 | AT3G02065 | 33.333 | 135 | 84 | 3 | 18 | 149 | 195 | 326 | 2.69e-12 | 64.3 |
| MS.gene60216.t1 | AT3G02065 | 33.333 | 135 | 84 | 3 | 18 | 149 | 332 | 463 | 5.43e-12 | 63.9 |
| MS.gene60216.t1 | AT3G02065 | 33.333 | 135 | 84 | 3 | 18 | 149 | 332 | 463 | 5.43e-12 | 63.9 |
| MS.gene60216.t1 | AT1G12770 | 28.788 | 132 | 91 | 1 | 15 | 146 | 381 | 509 | 2.84e-11 | 61.6 |
| MS.gene60216.t1 | AT1G12770 | 28.788 | 132 | 91 | 1 | 15 | 146 | 381 | 509 | 2.84e-11 | 61.6 |
| MS.gene60216.t1 | AT5G05450 | 28.369 | 141 | 94 | 2 | 12 | 148 | 245 | 382 | 2.95e-11 | 61.6 |
Find 39 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTCTTCATGGTCTTGTTC+AGG | 0.261990 | 4.1:+68091503 | MS.gene60216:CDS |
| CCATCAATTTGCATACATTC+TGG | 0.285699 | 4.1:+68091754 | MS.gene60216:CDS |
| AAGACCATGAAGAGTCAATT+TGG | 0.351581 | 4.1:-68091496 | None:intergenic |
| GTGGGTAGAGCTGGTAGATT+TGG | 0.365949 | 4.1:+68093422 | MS.gene60216:CDS |
| CCAGAATGTATGCAAATTGA+TGG | 0.376590 | 4.1:-68091754 | None:intergenic |
| TGACTCTGAAGTTCTTAATC+AGG | 0.377300 | 4.1:+68093484 | MS.gene60216:CDS |
| GTGGAGGTGTCAATTTGTTC+AGG | 0.377618 | 4.1:-68093655 | None:intergenic |
| TAGGTTTGAGGTTGATATAA+AGG | 0.405007 | 4.1:+68093627 | MS.gene60216:CDS |
| GAGGCCAAATTGACTCTTCA+TGG | 0.406230 | 4.1:+68091492 | MS.gene60216:CDS |
| GTCACAAAACTTGATCAATT+AGG | 0.428105 | 4.1:-68093974 | None:intergenic |
| AACTGGTAGGTGGGTAGAGC+TGG | 0.430229 | 4.1:+68093413 | MS.gene60216:intron |
| TTCAGCTTACGATTCTTCTC+TGG | 0.442230 | 4.1:-68091631 | None:intergenic |
| ATCATCTACATAAATTTCCA+TGG | 0.469432 | 4.1:-68091469 | None:intergenic |
| AGATAGGTATCAGCAGAATC+AGG | 0.470818 | 4.1:-68093248 | None:intergenic |
| TCAGGTGCAATCTAGGTTTG+AGG | 0.476362 | 4.1:+68093615 | MS.gene60216:intron |
| TTTCAGATTGAAGCGATACA+AGG | 0.493825 | 4.1:+68093127 | MS.gene60216:intron |
| CTGCTGATACCTATCTTCAC+AGG | 0.495663 | 4.1:+68093255 | MS.gene60216:CDS |
| AGCACTTACCCTGTGAAGAT+AGG | 0.504586 | 4.1:-68093264 | None:intergenic |
| GCTGGTAGATTTGGCACCAA+GGG | 0.527211 | 4.1:+68093431 | MS.gene60216:CDS |
| AGCTGGTAGATTTGGCACCA+AGG | 0.557173 | 4.1:+68093430 | MS.gene60216:CDS |
| TCTGGAATGTCACAAGAAGA+AGG | 0.557470 | 4.1:+68091772 | MS.gene60216:CDS |
| CTCGTGGCAACCGATTTAGT+AGG | 0.561671 | 4.1:+68093176 | MS.gene60216:CDS |
| CAGAATGTATGCAAATTGAT+GGG | 0.563982 | 4.1:-68091753 | None:intergenic |
| GGCAACCGATTTAGTAGGGA+GGG | 0.566914 | 4.1:+68093181 | MS.gene60216:CDS |
| AAAAGTAATTGCAAGCCCCT+TGG | 0.567368 | 4.1:-68093447 | None:intergenic |
| CGATACAAGGGCTTCAAAGA+GGG | 0.568834 | 4.1:+68093140 | MS.gene60216:CDS |
| TCGTGGCAACCGATTTAGTA+GGG | 0.570668 | 4.1:+68093177 | MS.gene60216:CDS |
| CAACCGATTTAGTAGGGAGG+GGG | 0.579596 | 4.1:+68093183 | MS.gene60216:CDS |
| TCATCTACATAAATTTCCAT+GGG | 0.581419 | 4.1:-68091468 | None:intergenic |
| GCAACCGATTTAGTAGGGAG+GGG | 0.585593 | 4.1:+68093182 | MS.gene60216:CDS |
| GGAAATTTATGTAGATGATG+AGG | 0.602038 | 4.1:+68091473 | MS.gene60216:CDS |
| GCGATACAAGGGCTTCAAAG+AGG | 0.604199 | 4.1:+68093139 | MS.gene60216:CDS |
| GATACAAGGGCTTCAAAGAG+GGG | 0.617527 | 4.1:+68093141 | MS.gene60216:CDS |
| TTCAGATTGAAGCGATACAA+GGG | 0.636996 | 4.1:+68093128 | MS.gene60216:intron |
| AAGTATCTTACTGTATGTGG+AGG | 0.637443 | 4.1:-68093671 | None:intergenic |
| CTGGTAGATTTGGCACCAAG+GGG | 0.659086 | 4.1:+68093432 | MS.gene60216:CDS |
| TGCTGATACCTATCTTCACA+GGG | 0.659100 | 4.1:+68093256 | MS.gene60216:CDS |
| GGGGAAGCAGAGAATTCTCG+TGG | 0.676806 | 4.1:+68093160 | MS.gene60216:CDS |
| TGGCAACCGATTTAGTAGGG+AGG | 0.690164 | 4.1:+68093180 | MS.gene60216:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTAATAGATTTTTTTT+TGG | + | chr4.1:68092996-68093015 | MS.gene60216:intron | 10.0% |
| !! | AGATTCTTTCTATTAATTTA+AGG | + | chr4.1:68092970-68092989 | MS.gene60216:intron | 15.0% |
| !! | GATTCTTTCTATTAATTTAA+GGG | + | chr4.1:68092971-68092990 | MS.gene60216:intron | 15.0% |
| !!! | ATTGTTGACTTTAATTTTTA+TGG | + | chr4.1:68092195-68092214 | MS.gene60216:intron | 15.0% |
| !!! | TCTAAAATCATATTTATCAA+TGG | - | chr4.1:68092780-68092799 | None:intergenic | 15.0% |
| !!! | TCTAGTTTAAATATAGTTTT+TGG | + | chr4.1:68093309-68093328 | MS.gene60216:intron | 15.0% |
| !!! | TTTTTTTGGTGAAAAATTAA+GGG | + | chr4.1:68093010-68093029 | MS.gene60216:intron | 15.0% |
| !!! | TTTTTTTTGGTGAAAAATTA+AGG | + | chr4.1:68093009-68093028 | MS.gene60216:intron | 15.0% |
| !! | AGAAAGATATCAACAATAAT+AGG | - | chr4.1:68091554-68091573 | None:intergenic | 20.0% |
| !! | ATAAGCATATAAAGATAGAA+AGG | - | chr4.1:68093384-68093403 | None:intergenic | 20.0% |
| !! | GAAAGATATCAACAATAATA+GGG | - | chr4.1:68091553-68091572 | None:intergenic | 20.0% |
| !! | TGAAAATAAAGTTTAGCTAT+TGG | - | chr4.1:68093598-68093617 | None:intergenic | 20.0% |
| !! | TGCTAAAAATATAGTAACAT+AGG | - | chr4.1:68091964-68091983 | None:intergenic | 20.0% |
| !!! | AATAGCTAAACTTTATTTTC+AGG | + | chr4.1:68093597-68093616 | MS.gene60216:intron | 20.0% |
| !!! | TGTTACTATATTTTTAGCAT+TGG | + | chr4.1:68091965-68091984 | MS.gene60216:intron | 20.0% |
| !!! | TTGGTTAATAAAAGTATCAA+TGG | - | chr4.1:68093579-68093598 | None:intergenic | 20.0% |
| !!! | TTTTGACAAAAATAACAACT+TGG | - | chr4.1:68091684-68091703 | None:intergenic | 20.0% |
| ! | AAATCATATTTATCAATGGC+AGG | - | chr4.1:68092776-68092795 | None:intergenic | 25.0% |
| ! | AATCATATTTATCAATGGCA+GGG | - | chr4.1:68092775-68092794 | None:intergenic | 25.0% |
| ! | ACTATCAATCCTACAAAATT+CGG | - | chr4.1:68092144-68092163 | None:intergenic | 25.0% |
| ! | AGTTTCAAGATCTTGTAAAT+TGG | + | chr4.1:68092469-68092488 | MS.gene60216:intron | 25.0% |
| ! | ATTATGCAAGATTATCTCTT+GGG | + | chr4.1:68092032-68092051 | MS.gene60216:intron | 25.0% |
| ! | CAATCTCTTACTTAATACTA+TGG | - | chr4.1:68092082-68092101 | None:intergenic | 25.0% |
| ! | CCTATAATCATAGTTATCAA+TGG | - | chr4.1:68092866-68092885 | None:intergenic | 25.0% |
| ! | GTTTCAAGATCTTGTAAATT+GGG | + | chr4.1:68092470-68092489 | MS.gene60216:intron | 25.0% |
| ! | TATTATGCAAGATTATCTCT+TGG | + | chr4.1:68092031-68092050 | MS.gene60216:intron | 25.0% |
| !! | ATTTAATGTAGTGCTGAAAA+AGG | - | chr4.1:68091603-68091622 | None:intergenic | 25.0% |
| !! | CCATTGATAACTATGATTAT+AGG | + | chr4.1:68092863-68092882 | MS.gene60216:intron | 25.0% |
| !! | GATCCAACAATTTTATAATG+GGG | + | chr4.1:68092575-68092594 | MS.gene60216:intron | 25.0% |
| !! | GGATCCAACAATTTTATAAT+GGG | + | chr4.1:68092574-68092593 | MS.gene60216:intron | 25.0% |
| !! | TCTATCATTTTCATTGAAAC+TGG | + | chr4.1:68093531-68093550 | MS.gene60216:intron | 25.0% |
| !! | TGGATCCAACAATTTTATAA+TGG | + | chr4.1:68092573-68092592 | MS.gene60216:intron | 25.0% |
| !! | TTGTAGGATTGATAGTAAAA+TGG | + | chr4.1:68092148-68092167 | MS.gene60216:intron | 25.0% |
| !!! | AAAAAGTATCTTACTGTATG+TGG | - | chr4.1:68093677-68093696 | None:intergenic | 25.0% |
| !!! | AGAGATTGCGTTTTTTATAT+TGG | + | chr4.1:68092094-68092113 | MS.gene60216:intron | 25.0% |
| !!! | GCTTTATAAAGGTTTTATCT+TGG | + | chr4.1:68093915-68093934 | MS.gene60216:intron | 25.0% |
| !!! | TACTTTTTCGTAGTAGTTTA+TGG | + | chr4.1:68093689-68093708 | MS.gene60216:intron | 25.0% |
| AATCATAGTTATCAATGGCA+GGG | - | chr4.1:68092861-68092880 | None:intergenic | 30.0% | |
| ACAAGTGTGATGCTTTATAA+AGG | + | chr4.1:68093904-68093923 | MS.gene60216:intron | 30.0% | |
| ATTCATTGAGAAAAGTTACC+AGG | + | chr4.1:68092827-68092846 | MS.gene60216:intron | 30.0% | |
| CAGAATGTATGCAAATTGAT+GGG | - | chr4.1:68091756-68091775 | None:intergenic | 30.0% | |
| CAGCATATAAAACATATACC+CGG | - | chr4.1:68091908-68091927 | None:intergenic | 30.0% | |
| GGAAATTTATGTAGATGATG+AGG | + | chr4.1:68091473-68091492 | MS.gene60216:CDS | 30.0% | |
| TAATCATAGTTATCAATGGC+AGG | - | chr4.1:68092862-68092881 | None:intergenic | 30.0% | |
| TATAAAGATAGAAAGGACAG+AGG | - | chr4.1:68093377-68093396 | None:intergenic | 30.0% | |
| TCACCCCATTATAAAATTGT+TGG | - | chr4.1:68092581-68092600 | None:intergenic | 30.0% | |
| TCAGTCTTAATAAACCAAGA+TGG | + | chr4.1:68092633-68092652 | MS.gene60216:intron | 30.0% | |
| TGCACAAAGTTTATTAGAAC+TGG | + | chr4.1:68093731-68093750 | MS.gene60216:intron | 30.0% | |
| TGGTGACCTTCAATTATAAT+GGG | + | chr4.1:68092388-68092407 | MS.gene60216:intron | 30.0% | |
| TTACAAGATCTTGAAACTTC+TGG | - | chr4.1:68092467-68092486 | None:intergenic | 30.0% | |
| ! | AAAGTATCAATGGCCAAAAA+GGG | - | chr4.1:68093569-68093588 | None:intergenic | 30.0% |
| ! | AAATGGACTTATGTCTGATT+AGG | + | chr4.1:68092165-68092184 | MS.gene60216:intron | 30.0% |
| ! | AGTTCTTAATCAGGTTAGTT+AGG | + | chr4.1:68093493-68093512 | MS.gene60216:intron | 30.0% |
| ! | ATCATTTTCATTGAAACTGG+AGG | + | chr4.1:68093534-68093553 | MS.gene60216:intron | 30.0% |
| ! | TACTGAACTTTATTTGTACG+AGG | - | chr4.1:68093054-68093073 | None:intergenic | 30.0% |
| ! | TAGTTATCAATTGTGGATTG+TGG | + | chr4.1:68092541-68092560 | MS.gene60216:intron | 30.0% |
| ! | TCAATGCTTTAAGCTGATTT+AGG | + | chr4.1:68091846-68091865 | MS.gene60216:intron | 30.0% |
| ! | TCATTTTCATTGAAACTGGA+GGG | + | chr4.1:68093535-68093554 | MS.gene60216:intron | 30.0% |
| ! | TGCACGAATAGTCAATATTT+TGG | - | chr4.1:68092008-68092027 | None:intergenic | 30.0% |
| !! | AAAAGTATCAATGGCCAAAA+AGG | - | chr4.1:68093570-68093589 | None:intergenic | 30.0% |
| !! | TAGGTTTGAGGTTGATATAA+AGG | + | chr4.1:68093627-68093646 | MS.gene60216:CDS | 30.0% |
| !!! | ATAGTTTTTGGCTTGTAGTA+TGG | + | chr4.1:68093321-68093340 | MS.gene60216:intron | 30.0% |
| !!! | TTTATTTTCAGGTGCAATCT+AGG | + | chr4.1:68093608-68093627 | MS.gene60216:intron | 30.0% |
| AAGACCATGAAGAGTCAATT+TGG | - | chr4.1:68091499-68091518 | None:intergenic | 35.0% | |
| AAGATCTTGAAACTTCTGGA+AGG | - | chr4.1:68092463-68092482 | None:intergenic | 35.0% | |
| AAGTATCTTACTGTATGTGG+AGG | - | chr4.1:68093674-68093693 | None:intergenic | 35.0% | |
| ATACCTAAACATATCCAGTC+CGG | - | chr4.1:68092418-68092437 | None:intergenic | 35.0% | |
| ATCATAGTTATCAATGGCAG+GGG | - | chr4.1:68092860-68092879 | None:intergenic | 35.0% | |
| ATCCATTTCCTGTTTGAAGA+GGG | + | chr4.1:68092503-68092522 | MS.gene60216:intron | 35.0% | |
| ATGCTGGATGTCTGTAAAAT+GGG | + | chr4.1:68091922-68091941 | MS.gene60216:intron | 35.0% | |
| CCAGAATGTATGCAAATTGA+TGG | - | chr4.1:68091757-68091776 | None:intergenic | 35.0% | |
| CCATCAATTTGCATACATTC+TGG | + | chr4.1:68091754-68091773 | MS.gene60216:CDS | 35.0% | |
| CTAGGCATAGTTATCAATTG+TGG | + | chr4.1:68092534-68092553 | MS.gene60216:intron | 35.0% | |
| GACAAATTGCTGATGAGATT+AGG | - | chr4.1:68092321-68092340 | None:intergenic | 35.0% | |
| GGTGACCTTCAATTATAATG+GGG | + | chr4.1:68092389-68092408 | MS.gene60216:intron | 35.0% | |
| GTGACCTTCAATTATAATGG+GGG | + | chr4.1:68092390-68092409 | MS.gene60216:intron | 35.0% | |
| GTGGTGACCTTCAATTATAA+TGG | + | chr4.1:68092387-68092406 | MS.gene60216:intron | 35.0% | |
| TAACTTACAGGAAAGGGATT+GGG | - | chr4.1:68092236-68092255 | None:intergenic | 35.0% | |
| TATCCATTTCCTGTTTGAAG+AGG | + | chr4.1:68092502-68092521 | MS.gene60216:intron | 35.0% | |
| TATGCTGGATGTCTGTAAAA+TGG | + | chr4.1:68091921-68091940 | MS.gene60216:intron | 35.0% | |
| TGGCTGGTAACTATTCTAAA+TGG | - | chr4.1:68092746-68092765 | None:intergenic | 35.0% | |
| TTAACTTACAGGAAAGGGAT+TGG | - | chr4.1:68092237-68092256 | None:intergenic | 35.0% | |
| TTCAGATTGAAGCGATACAA+GGG | + | chr4.1:68093128-68093147 | MS.gene60216:intron | 35.0% | |
| TTTCAGATTGAAGCGATACA+AGG | + | chr4.1:68093127-68093146 | MS.gene60216:intron | 35.0% | |
| ! | AGATCTTGAAACTTCTGGAA+GGG | - | chr4.1:68092462-68092481 | None:intergenic | 35.0% |
| ! | ATCTTGTGCTTTAAGTAGGT+TGG | + | chr4.1:68092294-68092313 | MS.gene60216:intron | 35.0% |
| ! | CATGATCTTGTGCTTTAAGT+AGG | + | chr4.1:68092290-68092309 | MS.gene60216:intron | 35.0% |
| ! | CATTTTCATTGAAACTGGAG+GGG | + | chr4.1:68093536-68093555 | MS.gene60216:intron | 35.0% |
| ! | CGGGTATATGTTTTATATGC+TGG | + | chr4.1:68091906-68091925 | MS.gene60216:intron | 35.0% |
| ! | TGACCTTCAATTATAATGGG+GGG | + | chr4.1:68092391-68092410 | MS.gene60216:intron | 35.0% |
| !! | ATTACTTTTGTGTCTTCTGC+TGG | + | chr4.1:68093461-68093480 | MS.gene60216:CDS | 35.0% |
| !! | TGACTCTGAAGTTCTTAATC+AGG | + | chr4.1:68093484-68093503 | MS.gene60216:CDS | 35.0% |
| !!! | CGTTCTAAGATGTTTTGTTC+CGG | + | chr4.1:68091886-68091905 | MS.gene60216:intron | 35.0% |
| !!! | GTTCTAAGATGTTTTGTTCC+GGG | + | chr4.1:68091887-68091906 | MS.gene60216:intron | 35.0% |
| AAAAGTAATTGCAAGCCCCT+TGG | - | chr4.1:68093450-68093469 | None:intergenic | 40.0% | |
| AAACAACACCCTCTTCAAAC+AGG | - | chr4.1:68092514-68092533 | None:intergenic | 40.0% | |
| AGATAGGTATCAGCAGAATC+AGG | - | chr4.1:68093251-68093270 | None:intergenic | 40.0% | |
| AGTACATAAGACTACGCATG+TGG | - | chr4.1:68091825-68091844 | None:intergenic | 40.0% | |
| ATGCTTATCGACATCTGAAC+TGG | + | chr4.1:68093396-68093415 | MS.gene60216:intron | 40.0% | |
| ATTTATCAATGGCAGGGTAG+CGG | - | chr4.1:68092769-68092788 | None:intergenic | 40.0% | |
| GATGTCTGTAAAATGGGACA+TGG | + | chr4.1:68091928-68091947 | MS.gene60216:intron | 40.0% | |
| GGAGGTTAACTTACAGGAAA+GGG | - | chr4.1:68092242-68092261 | None:intergenic | 40.0% | |
| GGCACTGCAGTAAAAACAAA+AGG | - | chr4.1:68093956-68093975 | None:intergenic | 40.0% | |
| TCTGTAAAATGGGACATGGT+TGG | + | chr4.1:68091932-68091951 | MS.gene60216:intron | 40.0% | |
| TGCTGATACCTATCTTCACA+GGG | + | chr4.1:68093256-68093275 | MS.gene60216:CDS | 40.0% | |
| TTATCGACATCTGAACTGGT+AGG | + | chr4.1:68093400-68093419 | MS.gene60216:intron | 40.0% | |
| TTCAGCTTACGATTCTTCTC+TGG | - | chr4.1:68091634-68091653 | None:intergenic | 40.0% | |
| TTGACTACTTCCAGCTTAGA+AGG | + | chr4.1:68092360-68092379 | MS.gene60216:intron | 40.0% | |
| TTTGCTTGTCAGATCTGAAG+TGG | - | chr4.1:68092699-68092718 | None:intergenic | 40.0% | |
| ! | AAGGACAGAGGTCTTTTACA+AGG | - | chr4.1:68093365-68093384 | None:intergenic | 40.0% |
| ! | AGTTCTCTGCCGAATTTTGT+AGG | + | chr4.1:68092132-68092151 | MS.gene60216:intron | 40.0% |
| ! | TCTGGAATGTCACAAGAAGA+AGG | + | chr4.1:68091772-68091791 | MS.gene60216:CDS | 40.0% |
| ! | TTCAATTATAATGGGGGGAC+CGG | + | chr4.1:68092396-68092415 | MS.gene60216:intron | 40.0% |
| ! | TTCCAGCTTAGAAGGTATAG+TGG | + | chr4.1:68092368-68092387 | MS.gene60216:intron | 40.0% |
| ! | TTGCTTGTCAGATCTGAAGT+GGG | - | chr4.1:68092698-68092717 | None:intergenic | 40.0% |
| !! | TTGAAGAGGGTGTTGTTTCT+AGG | + | chr4.1:68092516-68092535 | MS.gene60216:intron | 40.0% |
| AATCCCCCTCCCTACTAAAT+CGG | - | chr4.1:68093189-68093208 | None:intergenic | 45.0% | |
| ACTATGCAAACATGCACAGG+AGG | - | chr4.1:68092264-68092283 | None:intergenic | 45.0% | |
| AGCACTTACCCTGTGAAGAT+AGG | - | chr4.1:68093267-68093286 | None:intergenic | 45.0% | |
| CACCACTATACCTTCTAAGC+TGG | - | chr4.1:68092373-68092392 | None:intergenic | 45.0% | |
| CACCCTCTTCAAACAGGAAA+TGG | - | chr4.1:68092508-68092527 | None:intergenic | 45.0% | |
| CATTGAAACTGGAGGGGAAT+AGG | + | chr4.1:68093542-68093561 | MS.gene60216:intron | 45.0% | |
| CGATACAAGGGCTTCAAAGA+GGG | + | chr4.1:68093140-68093159 | MS.gene60216:CDS | 45.0% | |
| CTATGCAAACATGCACAGGA+GGG | - | chr4.1:68092263-68092282 | None:intergenic | 45.0% | |
| CTGAAACAGACATGTCGTCA+TGG | - | chr4.1:68093113-68093132 | None:intergenic | 45.0% | |
| CTGCTGATACCTATCTTCAC+AGG | + | chr4.1:68093255-68093274 | MS.gene60216:CDS | 45.0% | |
| GATACAAGGGCTTCAAAGAG+GGG | + | chr4.1:68093141-68093160 | MS.gene60216:CDS | 45.0% | |
| GGGAGGTTAACTTACAGGAA+AGG | - | chr4.1:68092243-68092262 | None:intergenic | 45.0% | |
| GGTCCCCCCATTATAATTGA+AGG | - | chr4.1:68092397-68092416 | None:intergenic | 45.0% | |
| TCAGGTGCAATCTAGGTTTG+AGG | + | chr4.1:68093615-68093634 | MS.gene60216:intron | 45.0% | |
| TCCTGTGCATGTTTGCATAG+TGG | + | chr4.1:68092263-68092282 | MS.gene60216:intron | 45.0% | |
| TGAGCCAGTAATCCGACATA+TGG | + | chr4.1:68092661-68092680 | MS.gene60216:intron | 45.0% | |
| TGGAGTCTAACTAGTTGCTC+TGG | - | chr4.1:68092726-68092745 | None:intergenic | 45.0% | |
| ! | CTTGTTCAGGTGCGTTTTGT+GGG | + | chr4.1:68091516-68091535 | MS.gene60216:intron | 45.0% |
| ! | GACAGAGGTCTTTTACAAGG+AGG | - | chr4.1:68093362-68093381 | None:intergenic | 45.0% |
| ! | GAGGCCAAATTGACTCTTCA+TGG | + | chr4.1:68091492-68091511 | MS.gene60216:CDS | 45.0% |
| ! | TCGTGGCAACCGATTTAGTA+GGG | + | chr4.1:68093177-68093196 | MS.gene60216:CDS | 45.0% |
| ! | TCTTGTTCAGGTGCGTTTTG+TGG | + | chr4.1:68091515-68091534 | MS.gene60216:intron | 45.0% |
| ! | TGCTTGTCAGATCTGAAGTG+GGG | - | chr4.1:68092697-68092716 | None:intergenic | 45.0% |
| !! | GACTCTTCATGGTCTTGTTC+AGG | + | chr4.1:68091503-68091522 | MS.gene60216:CDS | 45.0% |
| !! | GTGGAGGTGTCAATTTGTTC+AGG | - | chr4.1:68093658-68093677 | None:intergenic | 45.0% |
| AGCTGGTAGATTTGGCACCA+AGG | + | chr4.1:68093430-68093449 | MS.gene60216:CDS | 50.0% | |
| AGTTATCAATGGCAGGGGAG+TGG | - | chr4.1:68092855-68092874 | None:intergenic | 50.0% | |
| CAGGAGGGAGGTTAACTTAC+AGG | - | chr4.1:68092248-68092267 | None:intergenic | 50.0% | |
| CAGGCCATATGTCGGATTAC+TGG | - | chr4.1:68092668-68092687 | None:intergenic | 50.0% | |
| CGACATCTGAACTGGTAGGT+GGG | + | chr4.1:68093404-68093423 | MS.gene60216:intron | 50.0% | |
| CTGGTAGATTTGGCACCAAG+GGG | + | chr4.1:68093432-68093451 | MS.gene60216:CDS | 50.0% | |
| GCCACTATGCAAACATGCAC+AGG | - | chr4.1:68092267-68092286 | None:intergenic | 50.0% | |
| GCGATACAAGGGCTTCAAAG+AGG | + | chr4.1:68093139-68093158 | MS.gene60216:CDS | 50.0% | |
| GCTGGTAGATTTGGCACCAA+GGG | + | chr4.1:68093431-68093450 | MS.gene60216:CDS | 50.0% | |
| GTGGGTAGAGCTGGTAGATT+TGG | + | chr4.1:68093422-68093441 | MS.gene60216:CDS | 50.0% | |
| TCGACATCTGAACTGGTAGG+TGG | + | chr4.1:68093403-68093422 | MS.gene60216:intron | 50.0% | |
| ! | ACTGGCTCAACTAGCCATCT+TGG | - | chr4.1:68092650-68092669 | None:intergenic | 50.0% |
| ! | CAACCGATTTAGTAGGGAGG+GGG | + | chr4.1:68093183-68093202 | MS.gene60216:CDS | 50.0% |
| ! | CTCGTGGCAACCGATTTAGT+AGG | + | chr4.1:68093176-68093195 | MS.gene60216:CDS | 50.0% |
| ! | GAGGGGAATAGGACCCTTTT+TGG | + | chr4.1:68093553-68093572 | MS.gene60216:intron | 50.0% |
| ! | GCAACCGATTTAGTAGGGAG+GGG | + | chr4.1:68093182-68093201 | MS.gene60216:CDS | 50.0% |
| ! | GGACCGGACTGGATATGTTT+AGG | + | chr4.1:68092412-68092431 | MS.gene60216:intron | 50.0% |
| ! | GGCAACCGATTTAGTAGGGA+GGG | + | chr4.1:68093181-68093200 | MS.gene60216:CDS | 50.0% |
| ! | GTGGATTGTGGCACAGTAAC+TGG | + | chr4.1:68092553-68092572 | MS.gene60216:intron | 50.0% |
| ! | TGGCAACCGATTTAGTAGGG+AGG | + | chr4.1:68093180-68093199 | MS.gene60216:CDS | 50.0% |
| AACTGGTAGGTGGGTAGAGC+TGG | + | chr4.1:68093413-68093432 | MS.gene60216:intron | 55.0% | |
| GGCTTGGACAGGCCATATGT+CGG | - | chr4.1:68092676-68092695 | None:intergenic | 55.0% | |
| GGGGAAGCAGAGAATTCTCG+TGG | + | chr4.1:68093160-68093179 | MS.gene60216:CDS | 55.0% | |
| TGCAAACATGCACAGGAGGG+AGG | - | chr4.1:68092260-68092279 | None:intergenic | 55.0% | |
| ! | ATCTGAAGTGGGGCTTGGAC+AGG | - | chr4.1:68092687-68092706 | None:intergenic | 55.0% |
| ! | GTCAGATCTGAAGTGGGGCT+TGG | - | chr4.1:68092692-68092711 | None:intergenic | 55.0% |
| ! | TATCAATGGCAGGGTAGCGG+TGG | - | chr4.1:68092766-68092785 | None:intergenic | 55.0% |
| ! | TTATAATGGGGGGACCGGAC+TGG | + | chr4.1:68092401-68092420 | MS.gene60216:intron | 55.0% |
| AATGGCAGGGGAGTGGTGCC+TGG | - | chr4.1:68092848-68092867 | None:intergenic | 65.0% | |
| ! | AATGGCAGGGTAGCGGTGGC+TGG | - | chr4.1:68092762-68092781 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 68091471 | 68093982 | 68091471 | ID=MS.gene60216 |
| chr4.1 | mRNA | 68091471 | 68093982 | 68091471 | ID=MS.gene60216.t1;Parent=MS.gene60216 |
| chr4.1 | exon | 68091471 | 68091524 | 68091471 | ID=MS.gene60216.t1.exon1;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68091471 | 68091524 | 68091471 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| chr4.1 | exon | 68091610 | 68091803 | 68091610 | ID=MS.gene60216.t1.exon2;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68091610 | 68091803 | 68091610 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| chr4.1 | exon | 68093133 | 68093277 | 68093133 | ID=MS.gene60216.t1.exon3;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68093133 | 68093277 | 68093133 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| chr4.1 | exon | 68093422 | 68093505 | 68093422 | ID=MS.gene60216.t1.exon4;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68093422 | 68093505 | 68093422 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| chr4.1 | exon | 68093619 | 68093682 | 68093619 | ID=MS.gene60216.t1.exon5;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68093619 | 68093682 | 68093619 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| chr4.1 | exon | 68093972 | 68093982 | 68093972 | ID=MS.gene60216.t1.exon6;Parent=MS.gene60216.t1 |
| chr4.1 | CDS | 68093972 | 68093982 | 68093972 | ID=cds.MS.gene60216.t1;Parent=MS.gene60216.t1 |
| Gene Sequence |
| Protein sequence |
