AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60269

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60269.t1 MTR_1g012020 93.356 873 44 5 1 865 1 867 0.0 1603
MS.gene60269.t1 MTR_5g006530 48.404 188 94 3 473 659 240 425 2.27e-50 187
MS.gene60269.t1 MTR_5g006530 48.404 188 94 3 473 659 464 649 7.68e-50 189
MS.gene60269.t1 MTR_1g080640 62.500 96 34 1 422 517 5 98 2.57e-30 115
MS.gene60269.t1 MTR_8g095100 61.458 96 35 1 422 517 5 98 3.90e-30 115
MS.gene60269.t1 MTR_8g103320 41.040 173 90 6 469 635 52 218 1.89e-29 123
MS.gene60269.t1 MTR_1g101580 60.417 96 36 1 422 517 5 98 4.17e-29 112
MS.gene60269.t1 MTR_1g073270 60.417 96 36 1 422 517 5 98 5.80e-29 111
MS.gene60269.t1 MTR_2g049090 56.481 108 35 2 422 517 5 112 5.92e-29 112
MS.gene60269.t1 MTR_6g087590 47.727 132 60 3 496 624 128 253 1.48e-28 122
MS.gene60269.t1 MTR_3g110122 38.172 186 106 5 439 621 90 269 2.05e-28 121
MS.gene60269.t1 MTR_6g071120 49.612 129 39 2 389 517 1 103 5.82e-28 108
MS.gene60269.t1 MTR_1g027430 82.258 62 11 0 422 483 5 66 1.58e-27 107
MS.gene60269.t1 MTR_4g076830 64.286 84 22 1 422 497 5 88 1.59e-26 104
MS.gene60269.t1 MTR_7g022680 80.645 62 12 0 422 483 5 66 1.73e-26 103
MS.gene60269.t1 MTR_1g012000 89.091 55 6 0 38 92 9 63 3.33e-26 102
MS.gene60269.t1 MTR_4g010860 67.089 79 23 1 422 497 6 84 6.20e-25 100
MS.gene60269.t1 MTR_0181s0060 55.670 97 31 2 429 513 35 131 8.94e-24 98.2
MS.gene60269.t1 MTR_1g103230 41.322 121 69 1 504 624 446 564 5.12e-23 105
MS.gene60269.t1 MTR_5g011530 58.750 80 25 1 426 497 43 122 6.09e-20 87.0
MS.gene60269.t1 MTR_8g015660 75.806 62 13 1 422 483 9 68 1.23e-19 94.0
MS.gene60269.t1 MTR_1g011990 69.565 69 8 2 257 316 46 110 1.33e-18 91.7
MS.gene60269.t1 MTR_2g036100 47.170 106 22 2 422 517 5 86 3.93e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60269.t1 AT3G22780 33.333 549 242 23 310 843 254 693 4.89e-61 220
MS.gene60269.t1 AT3G22760 39.812 319 139 10 318 636 77 342 1.90e-52 191
MS.gene60269.t1 AT3G22760 39.812 319 139 10 318 636 200 465 1.01e-51 192
MS.gene60269.t1 AT4G14770 38.636 308 138 8 317 624 226 482 2.84e-50 188
MS.gene60269.t1 AT4G14770 27.003 337 182 12 563 843 325 653 3.64e-14 77.0
MS.gene60269.t1 AT4G14770 38.636 308 138 8 317 624 225 481 2.85e-50 188
MS.gene60269.t1 AT4G14770 27.003 337 182 12 563 843 324 652 3.60e-14 77.0
MS.gene60269.t1 AT4G14770 38.636 308 138 8 317 624 245 501 4.25e-50 188
MS.gene60269.t1 AT4G14770 27.003 337 182 12 563 843 344 672 4.83e-14 76.6
MS.gene60269.t1 AT3G04850 32.857 350 167 10 296 621 271 576 3.73e-45 173
MS.gene60269.t1 AT5G25790 43.750 160 77 7 478 633 74 224 2.39e-30 125
MS.gene60269.t1 AT5G25790 42.593 162 80 6 478 633 74 228 3.58e-30 125
MS.gene60269.t1 AT5G25790 40.437 183 90 7 457 633 59 228 3.86e-30 126
MS.gene60269.t1 AT2G20110 46.099 141 67 4 496 632 119 254 6.03e-30 125
MS.gene60269.t1 AT2G20110 46.099 141 67 4 496 632 119 254 7.30e-30 126
MS.gene60269.t1 AT2G20110 46.099 141 67 4 496 632 119 254 9.84e-30 125
MS.gene60269.t1 AT4G29000 44.366 142 68 5 496 632 132 267 6.39e-28 120
MS.gene60269.t1 AT3G16160 46.774 124 60 3 496 619 66 183 1.06e-24 107

Find 204 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTAGACGCTGCCTACAATT+TGG 0.186201 1.1:+8747053 MS.gene60269:CDS
TGCGGTATTCGCCAGTTATC+TGG 0.216353 1.1:+8749589 MS.gene60269:CDS
GAAGCCTTGACAGACTTTAT+TGG 0.240331 1.1:-8745197 None:intergenic
AGCATCTGTCGATGAATATT+TGG 0.259084 1.1:+8745590 MS.gene60269:CDS
GTGGAGGAGAAACTCTCTTT+TGG 0.268257 1.1:-8749771 None:intergenic
ATGTTTCTGTGTCTGATAAA+TGG 0.269432 1.1:-8745413 None:intergenic
TTCTCCCCTTCAATTGTTGC+AGG 0.272545 1.1:-8745801 None:intergenic
TGGTAACAGAGTAGAATTTC+AGG 0.294634 1.1:+8747844 MS.gene60269:CDS
ATGCAAACTTATAGAAGATT+TGG 0.296279 1.1:-8747273 None:intergenic
GAAGCTGCTTCCGTTGTTCT+TGG 0.299878 1.1:+8747077 MS.gene60269:CDS
CATTGCAACAATGGTGTTAC+AGG 0.307892 1.1:-8749260 None:intergenic
TTCTTAATCTGAGAAGCTTC+TGG 0.309298 1.1:-8744105 None:intergenic
GTAGACGCTGCCTACAATTT+GGG 0.311899 1.1:+8747054 MS.gene60269:CDS
CTCTTATCAGGTGCATTTGC+CGG 0.312680 1.1:-8747452 None:intergenic
ATGCTGGAGGACTGCTGCTC+TGG 0.318764 1.1:-8745572 None:intergenic
TTCTATAAGTTTGCATATAG+TGG 0.322912 1.1:+8747280 MS.gene60269:CDS
CATGCGACACATGGGTTTCT+CGG 0.326256 1.1:+8745221 MS.gene60269:CDS
TTTGTTGGAGGAATCTAATA+TGG 0.332408 1.1:+8745746 MS.gene60269:CDS
ATCCTCAACTCCGTCCAATA+TGG 0.338930 1.1:+8747316 MS.gene60269:CDS
TGATGTTCCACTGAATAATA+TGG 0.341118 1.1:+8747946 MS.gene60269:CDS
TTGCAATGGCAATGAGGATT+CGG 0.342240 1.1:+8749915 MS.gene60269:CDS
AATTTATATTAAAATTTGAT+AGG 0.342632 1.1:+8745685 MS.gene60269:CDS
CTGGCGAATACCGCATCTAT+TGG 0.354125 1.1:-8749581 None:intergenic
GGGCGTACCCTCCTCTTATC+AGG 0.364892 1.1:-8747464 None:intergenic
TGCAGTTACTGTGATTGTTT+TGG 0.366597 1.1:+8747779 MS.gene60269:intron
AGCAAATGCTTGTGGATTAC+GGG 0.369212 1.1:-8747900 None:intergenic
AGTGTTGACAAATCTCAAAA+AGG 0.377839 1.1:-8745168 None:intergenic
AAAAGATTGATCATCCATAT+TGG 0.378531 1.1:-8747330 None:intergenic
AGCTGCACATGGTACAATCT+TGG 0.387960 1.1:-8747924 None:intergenic
ATTTGCTTTCACAGACTTGA+TGG 0.391070 1.1:-8749740 None:intergenic
GAGCAAATGCTTGTGGATTA+CGG 0.393901 1.1:-8747901 None:intergenic
CTACTGAAGCATCAGTTTCA+TGG 0.398320 1.1:-8747373 None:intergenic
TGCAATGGCAATGAGGATTC+GGG 0.411133 1.1:+8749916 MS.gene60269:CDS
CGGATTGGACCAAGCTCCTC+AGG 0.411862 1.1:+8749808 MS.gene60269:CDS
AAGTTAGCGCTTGGGGTAAT+CGG 0.415030 1.1:-8749640 None:intergenic
GACAGAAAATTGTGACAATC+AGG 0.415519 1.1:+8749204 MS.gene60269:CDS
CAACCCAATGCCTGGTGGCT+TGG 0.420396 1.1:-8747168 None:intergenic
GCGGTATTCGCCAGTTATCT+GGG 0.421949 1.1:+8749590 MS.gene60269:CDS
GAGATTATCAGATGGTATAC+AGG 0.422125 1.1:+8747247 MS.gene60269:CDS
AGTTCTTCTGCTATGTTACT+AGG 0.425346 1.1:-8745717 None:intergenic
CATCATCTAAGTTAGCGCTT+GGG 0.426755 1.1:-8749648 None:intergenic
TGATCCTATCCAGGCTGTTA+AGG 0.432469 1.1:+8746111 MS.gene60269:CDS
GAAAATCCTGCAACAATTGA+AGG 0.434474 1.1:+8745795 MS.gene60269:CDS
ACTTTGCACCCTGCTTGCCT+TGG 0.435412 1.1:-8749408 None:intergenic
AATGATGTATACTTGAACTT+GGG 0.435796 1.1:-8744202 None:intergenic
GCTAACGTTGGATGCTCGAC+TGG 0.440058 1.1:+8748240 MS.gene60269:CDS
GAAGCTTCCTTCAATACATC+AGG 0.449228 1.1:-8749712 None:intergenic
CGAGTATTGTGTTTCACGGT+GGG 0.450483 1.1:-8745291 None:intergenic
GATGGATGTATGAATGTCTT+TGG 0.451729 1.1:+8748273 MS.gene60269:CDS
TGAAACACCTGATGTATTGA+AGG 0.458665 1.1:+8749705 MS.gene60269:CDS
TTCTTACAGTTGCACGTCTT+AGG 0.458861 1.1:-8747661 None:intergenic
TTTGTATGTATCAGGCTTGA+AGG 0.461411 1.1:+8745387 MS.gene60269:intron
TCATCATCTAAGTTAGCGCT+TGG 0.462532 1.1:-8749649 None:intergenic
TTTCCAAGCCACCAGGCATT+GGG 0.462604 1.1:+8747165 MS.gene60269:CDS
GTTTCCAAGCCACCAGGCAT+TGG 0.462633 1.1:+8747164 MS.gene60269:CDS
TGCTGGAGGACTGCTGCTCT+GGG 0.462826 1.1:-8745571 None:intergenic
TCGATGGATTCTGTCAAGAT+AGG 0.463592 1.1:-8747422 None:intergenic
TACGGATGCCATGATACTTT+AGG 0.463804 1.1:-8747034 None:intergenic
TTTCAAATTCCTTAACAGCC+TGG 0.465100 1.1:-8746120 None:intergenic
AAATATTCATCGACAGATGC+TGG 0.465549 1.1:-8745588 None:intergenic
AGGATTGGTGATGGCGGTGG+CGG 0.467054 1.1:-8744166 None:intergenic
TGTTTCTGTGTCTGATAAAT+GGG 0.471859 1.1:-8745412 None:intergenic
GCTGCACATGGTACAATCTT+GGG 0.476181 1.1:-8747923 None:intergenic
TTTCCGAGTATTGTGTTTCA+CGG 0.478137 1.1:-8745295 None:intergenic
CCTAGTTGTGCTTCAACTAC+AGG 0.478757 1.1:+8747221 MS.gene60269:CDS
AAGCAGCTTCCCCAAATTGT+AGG 0.478821 1.1:-8747064 None:intergenic
AATTTCAAGCTTCAGTGTGC+AGG 0.480226 1.1:+8746043 MS.gene60269:intron
GGGGTCAACGGCGGGAATGA+AGG 0.482884 1.1:-8749871 None:intergenic
CAGCGCAAGGGGTCAACGGC+GGG 0.483041 1.1:-8749879 None:intergenic
CTAATATGGTTCATCAAGAA+AGG 0.485151 1.1:+8745760 MS.gene60269:CDS
GTTGAATTCCTCAGCATCTG+TGG 0.485615 1.1:-8747486 None:intergenic
TTCAAGCCACCTGAGGAGCT+TGG 0.487663 1.1:-8749817 None:intergenic
ATAAACTTAGGCTCGAGTTC+AGG 0.487680 1.1:+8745855 MS.gene60269:CDS
AGAATCCATCGACCTATATC+CGG 0.490265 1.1:+8747433 MS.gene60269:CDS
TTAACAGCCTGGATAGGATC+AGG 0.491802 1.1:-8746109 None:intergenic
CAACATTGTTGAAGAAGGGT+TGG 0.492695 1.1:+8749163 MS.gene60269:CDS
GTTTATAACAGTTGCTCAGA+AGG 0.493717 1.1:+8745521 MS.gene60269:CDS
TTTGTCCAGCCAAGGCAAGC+AGG 0.495977 1.1:+8749399 MS.gene60269:intron
TTGCCATGATTCACTTCCCC+AGG 0.497451 1.1:+8745902 MS.gene60269:CDS
GAGAGCAACATTGTTGAAGA+AGG 0.497547 1.1:+8749158 MS.gene60269:CDS
TCTCAAGAGCACATAAACTT+AGG 0.497807 1.1:+8745843 MS.gene60269:CDS
AAATGATGTATACTTGAACT+TGG 0.498024 1.1:-8744203 None:intergenic
ACAGGTGAGAGGTGATTTGC+TGG 0.503058 1.1:-8749242 None:intergenic
CGGCAAATGCACCTGATAAG+AGG 0.504086 1.1:+8747453 MS.gene60269:CDS
AAAGAGGTTGCAATTGCAAA+AGG 0.504487 1.1:+8748088 MS.gene60269:CDS
ATTGATGCCTGATCCTATCC+AGG 0.512947 1.1:+8746102 MS.gene60269:CDS
CAAATTGTAGGCAGCGTCTA+CGG 0.518260 1.1:-8747052 None:intergenic
ATCATCTAAGTTAGCGCTTG+GGG 0.519646 1.1:-8749647 None:intergenic
TTGTTCCATTTGATCATCCA+CGG 0.524692 1.1:-8745619 None:intergenic
TACCGCATCTATTGGAGAGT+TGG 0.524893 1.1:-8749573 None:intergenic
TTGTCCAGCCAAGGCAAGCA+GGG 0.526069 1.1:+8749400 MS.gene60269:intron
TTTAAATGCAACCCAATGCC+TGG 0.526474 1.1:-8747176 None:intergenic
TCCTCAGGTGGCTTGAAAAG+TGG 0.529192 1.1:+8749823 MS.gene60269:CDS
ATATTAGATTCCTCCAACAA+AGG 0.530012 1.1:-8745744 None:intergenic
CATCTATTGGAGAGTTGGTA+TGG 0.533401 1.1:-8749568 None:intergenic
AGAAGGATTGGTGATGGCGG+TGG 0.534777 1.1:-8744169 None:intergenic
GCTGGAATCTTCTGTGGCGA+CGG 0.536040 1.1:+8747803 MS.gene60269:CDS
TTGGTCCAATCCGAAGTAGA+TGG 0.538272 1.1:-8749798 None:intergenic
TTGAATTCCTCAGCATCTGT+GGG 0.538648 1.1:-8747485 None:intergenic
TACTCAGAGCATTGCAACAA+TGG 0.538876 1.1:-8749269 None:intergenic
CAGGCTAGCCTAAAGTATCA+TGG 0.540060 1.1:+8747026 MS.gene60269:intron
TTTGCTTTCACAGACTTGAT+GGG 0.542250 1.1:-8749739 None:intergenic
CCACCGTGAAACACAATACT+CGG 0.542340 1.1:+8745292 MS.gene60269:CDS
TTACCTCAGAACCATCTTGT+GGG 0.543543 1.1:-8746189 None:intergenic
GTTATAAACACCTCTGGCAG+TGG 0.544020 1.1:-8745507 None:intergenic
ACATGCTTCTAGCAATGAAA+GGG 0.544689 1.1:+8749136 MS.gene60269:CDS
TCAACCATCCTAGCACCTCC+AGG 0.545986 1.1:+8747504 MS.gene60269:CDS
AATTCCTTAACAGCCTGGAT+AGG 0.546382 1.1:-8746115 None:intergenic
GTTGCACGTCTTAGGTCCAT+TGG 0.547167 1.1:-8747653 None:intergenic
TGATCCCGTGGATGATCAAA+TGG 0.547491 1.1:+8745614 MS.gene60269:CDS
GTGACAGTTTCCAAGCCACC+AGG 0.548258 1.1:+8747158 MS.gene60269:CDS
CAGAGCCATCTACTTCGGAT+TGG 0.548491 1.1:+8749793 MS.gene60269:CDS
CTCCACAGAGCCATCTACTT+CGG 0.551057 1.1:+8749788 MS.gene60269:CDS
AATGTCTTTGGCAAGAGAGA+AGG 0.551265 1.1:+8748285 MS.gene60269:CDS
AAGGCTTCTCATGCGACACA+TGG 0.551643 1.1:+8745212 MS.gene60269:CDS
ATTCTCTGAATTTACTTGTG+AGG 0.552178 1.1:-8746164 None:intergenic
ATCCATATTGGACGGAGTTG+AGG 0.552766 1.1:-8747318 None:intergenic
TTAAAATTTGATAGGAGTGA+CGG 0.554336 1.1:+8745693 MS.gene60269:CDS
CAGGTGCATTTGCCGGATAT+AGG 0.554569 1.1:-8747445 None:intergenic
CAGGTGGCTTGAAAAGTGGC+AGG 0.557391 1.1:+8749827 MS.gene60269:CDS
GGGTATTCGTGTCATTCTTG+AGG 0.561248 1.1:-8745551 None:intergenic
CCTGTAGTTGAAGCACAACT+AGG 0.562369 1.1:-8747221 None:intergenic
TGTTCCATTTGATCATCCAC+GGG 0.564377 1.1:-8745618 None:intergenic
ATTTGTCAAAAGGCTAACGT+TGG 0.564831 1.1:+8748228 MS.gene60269:intron
CGGTATTCGCCAGTTATCTG+GGG 0.571016 1.1:+8749591 MS.gene60269:CDS
TTTGGTGCTGGAATCTTCTG+TGG 0.572134 1.1:+8747797 MS.gene60269:CDS
GGCGACGGTTGTGCTTGCGA+AGG 0.572382 1.1:+8747818 MS.gene60269:CDS
ATCTTGGGAGCAAATGCTTG+TGG 0.574082 1.1:-8747908 None:intergenic
AAAATCCTGCAACAATTGAA+GGG 0.574303 1.1:+8745796 MS.gene60269:CDS
GAATCAGCGCAAGGGGTCAA+CGG 0.575782 1.1:-8749883 None:intergenic
AACATGCTTCTAGCAATGAA+AGG 0.575833 1.1:+8749135 MS.gene60269:CDS
GATGTATACTTGAACTTGGG+GGG 0.580200 1.1:-8744199 None:intergenic
TTACCTGGGGAAGTGAATCA+TGG 0.582239 1.1:-8745905 None:intergenic
CCGAGTATTGTGTTTCACGG+TGG 0.583708 1.1:-8745292 None:intergenic
GATTCTAAAGTCCTTTGCAA+TGG 0.584197 1.1:+8749901 MS.gene60269:CDS
AACGTAGGAGACAACAGTCT+TGG 0.586213 1.1:+8745444 MS.gene60269:CDS
AGAGCAACATTGTTGAAGAA+GGG 0.586625 1.1:+8749159 MS.gene60269:CDS
GACTTTAGAATCAGCGCAAG+GGG 0.586639 1.1:-8749890 None:intergenic
AGATTATCAGATGGTATACA+GGG 0.586972 1.1:+8747248 MS.gene60269:CDS
TCAGAGAATATCCCACAAGA+TGG 0.588289 1.1:+8746178 MS.gene60269:CDS
TAGACGCTGCCTACAATTTG+GGG 0.588410 1.1:+8747055 MS.gene60269:CDS
GATTGATCATCCATATTGGA+CGG 0.592859 1.1:-8747326 None:intergenic
TTCTCAACAGCCACTGCCAG+AGG 0.593800 1.1:+8745497 MS.gene60269:CDS
ATAGGATCAGGCATCAATTG+AGG 0.595329 1.1:-8746097 None:intergenic
TGACAACACCGGCATCAGCT+AGG 0.595994 1.1:+8748061 MS.gene60269:CDS
TTCTGTCAAGATAGGAGACT+CGG 0.595997 1.1:-8747414 None:intergenic
TGAATATTTGGCTGATCCCG+TGG 0.596734 1.1:+8745602 MS.gene60269:CDS
ATTTGAAAATTGCAGTGAGA+TGG 0.600065 1.1:+8746135 MS.gene60269:CDS
GTCTCCAATAAAGTCTGTCA+AGG 0.601153 1.1:+8745193 MS.gene60269:CDS
TTCATCAGAAGGATTGGTGA+TGG 0.602391 1.1:-8744175 None:intergenic
ATTACCTCAGAACCATCTTG+TGG 0.602494 1.1:-8746190 None:intergenic
GGACTTTAGAATCAGCGCAA+GGG 0.602915 1.1:-8749891 None:intergenic
ATTGAGAGTTGAGGAGAGAG+AGG 0.603653 1.1:-8744142 None:intergenic
GCAACTGTTATAAACACCTC+TGG 0.607058 1.1:-8745513 None:intergenic
AACTTAGATGATGAATCAGA+TGG 0.610248 1.1:+8749658 MS.gene60269:CDS
GGTTGTGCTTGCGAAGGCTG+TGG 0.610748 1.1:+8747824 MS.gene60269:CDS
CGAAGTAGATGGCTCTGTGG+AGG 0.611110 1.1:-8749787 None:intergenic
GTCATCATCACTAACTGAGT+CGG 0.611386 1.1:+8745659 MS.gene60269:CDS
ATGATGTATACTTGAACTTG+GGG 0.612101 1.1:-8744201 None:intergenic
TCTGTAGATGAAGAACGTGT+AGG 0.614632 1.1:-8749523 None:intergenic
AGTCCTTTGCAATGGCAATG+AGG 0.616936 1.1:+8749909 MS.gene60269:CDS
CGCGGAGACTTGAATACGAG+AGG 0.617003 1.1:-8745257 None:intergenic
GCATCAGCTAGGCACAAAAG+AGG 0.618145 1.1:+8748072 MS.gene60269:CDS
TATCCCACAAGATGGTTCTG+AGG 0.620911 1.1:+8746186 MS.gene60269:CDS
CTATTGGAGAGTTGGTATGG+TGG 0.623132 1.1:-8749565 None:intergenic
ATTGGACCAAGCTCCTCAGG+TGG 0.623354 1.1:+8749811 MS.gene60269:CDS
AATCCTCATTGCCATTGCAA+AGG 0.624686 1.1:-8749912 None:intergenic
AACAGTCTTGGTGAAGCTCG+TGG 0.625856 1.1:+8745456 MS.gene60269:CDS
AGGACTTTAGAATCAGCGCA+AGG 0.627509 1.1:-8749892 None:intergenic
TCAGCGCAAGGGGTCAACGG+CGG 0.628739 1.1:-8749880 None:intergenic
TCTTATACCATATTATTCAG+TGG 0.629452 1.1:-8747953 None:intergenic
CAAATGCACCTGATAAGAGG+AGG 0.630195 1.1:+8747456 MS.gene60269:CDS
CTTATTACTTCCAAGAACAA+CGG 0.633004 1.1:-8747087 None:intergenic
ACAAGTACTGATGATGCCAA+TGG 0.639150 1.1:+8747637 MS.gene60269:CDS
CTTCATCTACAGAAAATGAG+TGG 0.639866 1.1:+8749533 MS.gene60269:CDS
GTGAAACACAATACTCGGAA+AGG 0.645194 1.1:+8745297 MS.gene60269:CDS
AAATCCTGCAACAATTGAAG+GGG 0.646037 1.1:+8745797 MS.gene60269:CDS
AGGCTTCTCATGCGACACAT+GGG 0.646230 1.1:+8745213 MS.gene60269:CDS
GAGTATTGTGTTTCACGGTG+GGG 0.646389 1.1:-8745290 None:intergenic
ATCAGAAGGATTGGTGATGG+CGG 0.649908 1.1:-8744172 None:intergenic
GGTACGCCCCACAGATGCTG+AGG 0.649944 1.1:+8747478 MS.gene60269:CDS
GGTGGCGGCATTGAGAGTTG+AGG 0.650716 1.1:-8744151 None:intergenic
TCGACTGGATGTCGATGTGA+TGG 0.651749 1.1:+8748255 MS.gene60269:CDS
GAAACATCTCAATGTAACGT+AGG 0.659012 1.1:+8745429 MS.gene60269:CDS
AGTGGAACATCAGCTGCACA+TGG 0.663360 1.1:-8747935 None:intergenic
TGATGTATACTTGAACTTGG+GGG 0.665983 1.1:-8744200 None:intergenic
AATGGAACAATATACTGATG+CGG 0.669121 1.1:+8745632 MS.gene60269:CDS
TACCAACTCTCCAATAGATG+CGG 0.673526 1.1:+8749571 MS.gene60269:CDS
CGGTGGGGAGCACTGATACG+CGG 0.675366 1.1:-8745275 None:intergenic
AAATGCACCTGATAAGAGGA+GGG 0.675925 1.1:+8747457 MS.gene60269:CDS
ATTTGCCGGATATAGGTCGA+TGG 0.681858 1.1:-8747438 None:intergenic
GGTATTCGCCAGTTATCTGG+GGG 0.691155 1.1:+8749592 MS.gene60269:CDS
ACAGGTGTGAGATTATCAGA+TGG 0.691185 1.1:+8747239 MS.gene60269:CDS
AAATGCAACCCAATGCCTGG+TGG 0.691964 1.1:-8747173 None:intergenic
AGATGTGAATATGACAACAC+CGG 0.696103 1.1:+8748050 MS.gene60269:CDS
TTTGCATATAGTGGAAAACG+TGG 0.696559 1.1:+8747289 MS.gene60269:CDS
TGAATTCCTCAGCATCTGTG+GGG 0.698955 1.1:-8747484 None:intergenic
ATCCGAAGTAGATGGCTCTG+TGG 0.709057 1.1:-8749790 None:intergenic
ACAATGGTGTTACAGGTGAG+AGG 0.709448 1.1:-8749253 None:intergenic
GGAGACTTGAATACGAGAGG+CGG 0.710854 1.1:-8745254 None:intergenic
GAATGTGCCAGACTGCTGCG+TGG 0.712112 1.1:-8749472 None:intergenic
GTAGTTGAAGCACAACTAGG+TGG 0.726466 1.1:-8747218 None:intergenic
TATTCATCGACAGATGCTGG+AGG 0.729564 1.1:-8745585 None:intergenic
GATTATCAGATGGTATACAG+GGG 0.764872 1.1:+8747249 MS.gene60269:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATACAATAACATAATTTT+TGG + chr1.1:8748775-8748794 MS.gene60269:intron 10.0%
!!! TATTTTAAATATTTGTCAAA+AGG + chr1.1:8748218-8748237 MS.gene60269:intron 10.0%
!! AAATTATGTTATTGTATTTC+AGG - chr1.1:8748774-8748793 None:intergenic 15.0%
!! AATTATGTTATTGTATTTCA+GGG - chr1.1:8748773-8748792 None:intergenic 15.0%
!! ACACAATAAATGAAATAAAA+TGG - chr1.1:8744408-8744427 None:intergenic 15.0%
!! ATATTTATAATGCTGATATA+GGG + chr1.1:8745952-8745971 MS.gene60269:intron 15.0%
!! TATATTTATAATGCTGATAT+AGG + chr1.1:8745951-8745970 MS.gene60269:intron 15.0%
!! TTTCACAAGAAAATAAAAAA+AGG + chr1.1:8744582-8744601 MS.gene60269:intron 15.0%
!!! AAATATCACCTAATTTTTTA+AGG - chr1.1:8748011-8748030 None:intergenic 15.0%
!!! AGAAATTTTAGAAACTAAAT+TGG - chr1.1:8748737-8748756 None:intergenic 15.0%
!!! AGCAATTTTTCTTAAATTTT+AGG + chr1.1:8748929-8748948 MS.gene60269:intron 15.0%
!!! CAATTTTTCTTAAATTTTAG+GGG + chr1.1:8748931-8748950 MS.gene60269:intron 15.0%
!!! CTTTTAGTTTTTTTAATCAT+TGG + chr1.1:8746395-8746414 MS.gene60269:intron 15.0%
!!! GAAATTTTAGAAACTAAATT+GGG - chr1.1:8748736-8748755 None:intergenic 15.0%
!!! GCAATTTTTCTTAAATTTTA+GGG + chr1.1:8748930-8748949 MS.gene60269:intron 15.0%
!!! TAATTGATTTTTTTTCTTTC+AGG + chr1.1:8746209-8746228 MS.gene60269:intron 15.0%
!!! TTTGTTTTAAAAGAAGTATT+AGG + chr1.1:8748642-8748661 MS.gene60269:intron 15.0%
!! AAAAGTCAGCAATAATTTAT+TGG + chr1.1:8746840-8746859 MS.gene60269:intron 20.0%
!! AAATAAATTCCTATAACATG+TGG - chr1.1:8748859-8748878 None:intergenic 20.0%
!! CACATTAAAATGAATACATA+TGG + chr1.1:8748832-8748851 MS.gene60269:intron 20.0%
!! CATTAAAATGCTTATCAATT+AGG + chr1.1:8744943-8744962 MS.gene60269:intron 20.0%
!! TATAAGGTTATCAATTAGAT+CGG + chr1.1:8744526-8744545 MS.gene60269:intron 20.0%
!! TCTTTACGATTATTATGTTA+TGG + chr1.1:8744305-8744324 MS.gene60269:intron 20.0%
!! TGGAATTATATTTGTTTGAT+TGG + chr1.1:8744850-8744869 MS.gene60269:intron 20.0%
!! TTTGCATCAAAATGAATATA+AGG + chr1.1:8744510-8744529 MS.gene60269:intron 20.0%
!!! ATAATTTTTGGTACTTCTTT+TGG + chr1.1:8748787-8748806 MS.gene60269:intron 20.0%
!!! ATGCAATATTTGGTAATATT+TGG - chr1.1:8747598-8747617 None:intergenic 20.0%
!!! ATTTAGAGCATATAGAAATA+TGG - chr1.1:8748164-8748183 None:intergenic 20.0%
!!! ATTTTAATGCAAAAATGAGA+CGG - chr1.1:8744932-8744951 None:intergenic 20.0%
!!! CATATGTATTCATTTTAATG+TGG - chr1.1:8748834-8748853 None:intergenic 20.0%
!!! TTTTTTAAATGCAGATTTTG+TGG + chr1.1:8749106-8749125 MS.gene60269:intron 20.0%
! AAAAAACTTAAAAGTTGTGC+TGG - chr1.1:8748463-8748482 None:intergenic 25.0%
! AAAAACTTAAAAGTTGTGCT+GGG - chr1.1:8748462-8748481 None:intergenic 25.0%
! AAAAGATTGATCATCCATAT+TGG - chr1.1:8747333-8747352 None:intergenic 25.0%
! AAACTTGATAAGCAGAAAAA+TGG - chr1.1:8746639-8746658 None:intergenic 25.0%
! AAAGTTCATATATTCATCAG+AGG - chr1.1:8746246-8746265 None:intergenic 25.0%
! AAATGATGTATACTTGAACT+TGG - chr1.1:8744206-8744225 None:intergenic 25.0%
! AACTTGATAAGCAGAAAAAT+GGG - chr1.1:8746638-8746657 None:intergenic 25.0%
! AATATTGCATTGCTCTATAT+AGG + chr1.1:8747608-8747627 MS.gene60269:intron 25.0%
! AATGATGTATACTTGAACTT+GGG - chr1.1:8744205-8744224 None:intergenic 25.0%
! AATGGAATGAAACAAAAAGT+AGG - chr1.1:8744464-8744483 None:intergenic 25.0%
! ACATCTCTAAACAAAAAAGA+CGG - chr1.1:8745018-8745037 None:intergenic 25.0%
! ATAAACAAAATCATTCAGAG+AGG - chr1.1:8746303-8746322 None:intergenic 25.0%
! ATATAGAGCAATGCAATATT+TGG - chr1.1:8747608-8747627 None:intergenic 25.0%
! ATGCAAACTTATAGAAGATT+TGG - chr1.1:8747276-8747295 None:intergenic 25.0%
! ATTGCATATCATAGAAAGTA+AGG - chr1.1:8747733-8747752 None:intergenic 25.0%
! GGGTAGCATAATTAATTAAT+TGG - chr1.1:8744239-8744258 None:intergenic 25.0%
! GTTCAAATTCTACTATGTTA+CGG + chr1.1:8744666-8744685 MS.gene60269:intron 25.0%
! TACAATGCAATGTCAAATAA+CGG - chr1.1:8744694-8744713 None:intergenic 25.0%
! TATAGGAATTTATTTCAGCA+TGG + chr1.1:8748864-8748883 MS.gene60269:intron 25.0%
! TCTTATACCATATTATTCAG+TGG - chr1.1:8747956-8747975 None:intergenic 25.0%
! TGACAAAATTTGTATGTATC+AGG + chr1.1:8745379-8745398 MS.gene60269:intron 25.0%
! TTAAAATTTGATAGGAGTGA+CGG + chr1.1:8745693-8745712 MS.gene60269:CDS 25.0%
! TTCTATAAGTTTGCATATAG+TGG + chr1.1:8747280-8747299 MS.gene60269:CDS 25.0%
! TTTAACAAAATTAGCAGAAG+TGG + chr1.1:8746555-8746574 MS.gene60269:intron 25.0%
! TTTATTGTGTTAGACATGTT+TGG + chr1.1:8744418-8744437 MS.gene60269:intron 25.0%
!! AAAATACTGTGAATGTTTTC+AGG + chr1.1:8748125-8748144 MS.gene60269:CDS 25.0%
!!! TCATTGATCTAGTTTGTTTA+TGG + chr1.1:8746504-8746523 MS.gene60269:intron 25.0%
!!! TTATCAAGTTTTGCTTTGTT+TGG + chr1.1:8746648-8746667 MS.gene60269:intron 25.0%
AAAATCCTGCAACAATTGAA+GGG + chr1.1:8745796-8745815 MS.gene60269:CDS 30.0%
AACTTAGATGATGAATCAGA+TGG + chr1.1:8749658-8749677 MS.gene60269:CDS 30.0%
AATGGAACAATATACTGATG+CGG + chr1.1:8745632-8745651 MS.gene60269:CDS 30.0%
ACCAAATACTAGTCCTTATA+AGG + chr1.1:8748419-8748438 MS.gene60269:intron 30.0%
ACTTGATAAGCAGAAAAATG+GGG - chr1.1:8746637-8746656 None:intergenic 30.0%
AGAATATTGTTCCAGAGATA+TGG - chr1.1:8744724-8744743 None:intergenic 30.0%
AGATTATCAGATGGTATACA+GGG + chr1.1:8747248-8747267 MS.gene60269:CDS 30.0%
ATAATTGTTACAGTCAATGC+AGG + chr1.1:8747007-8747026 MS.gene60269:intron 30.0%
ATATTAGATTCCTCCAACAA+AGG - chr1.1:8745747-8745766 None:intergenic 30.0%
ATCGTCAATAACAAAAGACA+CGG - chr1.1:8745344-8745363 None:intergenic 30.0%
ATGATGTATACTTGAACTTG+GGG - chr1.1:8744204-8744223 None:intergenic 30.0%
ATTCTCTGAATTTACTTGTG+AGG - chr1.1:8746167-8746186 None:intergenic 30.0%
ATTTGAAAATTGCAGTGAGA+TGG + chr1.1:8746135-8746154 MS.gene60269:CDS 30.0%
ATTTGGTAAAACTAGCAAAC+AGG - chr1.1:8747581-8747600 None:intergenic 30.0%
CCTTATAAGGAAAATTGTTG+AGG + chr1.1:8748432-8748451 MS.gene60269:intron 30.0%
CTAATATGGTTCATCAAGAA+AGG + chr1.1:8745760-8745779 MS.gene60269:CDS 30.0%
CTTATTACTTCCAAGAACAA+CGG - chr1.1:8747090-8747109 None:intergenic 30.0%
GTTATCATGATCTTTCTCAT+AGG + chr1.1:8747536-8747555 MS.gene60269:intron 30.0%
TCTGGTCAGTATAAATGTTA+TGG + chr1.1:8748371-8748390 MS.gene60269:intron 30.0%
TGATGTTCCACTGAATAATA+TGG + chr1.1:8747946-8747965 MS.gene60269:CDS 30.0%
TGGGTTAATTAACATAAGAG+AGG - chr1.1:8744907-8744926 None:intergenic 30.0%
TTTGTTGGAGGAATCTAATA+TGG + chr1.1:8745746-8745765 MS.gene60269:CDS 30.0%
! AGACAATGTTGTTTGATGAA+TGG - chr1.1:8744482-8744501 None:intergenic 30.0%
! ATGTTTCTGTGTCTGATAAA+TGG - chr1.1:8745416-8745435 None:intergenic 30.0%
! CCTCAACAATTTTCCTTATA+AGG - chr1.1:8748435-8748454 None:intergenic 30.0%
! CTAAATACTAGTCTCTTTAG+AGG + chr1.1:8746348-8746367 MS.gene60269:intron 30.0%
! GCAATAATTTATTGGCTACA+AGG + chr1.1:8746848-8746867 MS.gene60269:intron 30.0%
! GTGTTGACAAATCTCAAAAA+GGG - chr1.1:8745170-8745189 None:intergenic 30.0%
! TATACTGCATATTTCTGCAT+AGG + chr1.1:8746578-8746597 MS.gene60269:intron 30.0%
! TCCTTATAAGGACTAGTATT+TGG - chr1.1:8748423-8748442 None:intergenic 30.0%
! TGTTTCTGTGTCTGATAAAT+GGG - chr1.1:8745415-8745434 None:intergenic 30.0%
!! AAATTCACTAGACTTGCTTT+TGG + chr1.1:8744876-8744895 MS.gene60269:intron 30.0%
!! ACATGTATTTTGTTTGCACT+TGG + chr1.1:8746451-8746470 MS.gene60269:intron 30.0%
!! AGTGTTGACAAATCTCAAAA+AGG - chr1.1:8745171-8745190 None:intergenic 30.0%
!! CATGATAACTAACTTTTTCC+TGG - chr1.1:8747525-8747544 None:intergenic 30.0%
!! CATTTCTAGTATCACGAAAA+AGG + chr1.1:8745102-8745121 MS.gene60269:intron 30.0%
!! TAAATTTTAGGGGTTCAAAC+TGG + chr1.1:8748941-8748960 MS.gene60269:intron 30.0%
!!! AGAGTTGCATTTTGATTATC+AGG + chr1.1:8746934-8746953 MS.gene60269:intron 30.0%
AAAGAGGTTGCAATTGCAAA+AGG + chr1.1:8748088-8748107 MS.gene60269:CDS 35.0%
AAATATTCATCGACAGATGC+TGG - chr1.1:8745591-8745610 None:intergenic 35.0%
AAATCCTGCAACAATTGAAG+GGG + chr1.1:8745797-8745816 MS.gene60269:CDS 35.0%
AACAAAATCATTCAGAGAGG+AGG - chr1.1:8746300-8746319 None:intergenic 35.0%
AACATGCTTCTAGCAATGAA+AGG + chr1.1:8749135-8749154 MS.gene60269:CDS 35.0%
AACTTCAAGCAACGCAAAAA+TGG + chr1.1:8747130-8747149 MS.gene60269:CDS 35.0%
ACAAAATCATTCAGAGAGGA+GGG - chr1.1:8746299-8746318 None:intergenic 35.0%
ACAAATGCAAAAAGGCCAAT+CGG - chr1.1:8749384-8749403 None:intergenic 35.0%
ACAATTGAAGGGGAGAAAAA+TGG + chr1.1:8745807-8745826 MS.gene60269:CDS 35.0%
ACATATGGTCCACATGTTAT+AGG + chr1.1:8748847-8748866 MS.gene60269:intron 35.0%
ACATGCTTCTAGCAATGAAA+GGG + chr1.1:8749136-8749155 MS.gene60269:CDS 35.0%
ACTCTGTCTGTCTTTATGTT+TGG + chr1.1:8744360-8744379 MS.gene60269:intron 35.0%
AGAGCAACATTGTTGAAGAA+GGG + chr1.1:8749159-8749178 MS.gene60269:CDS 35.0%
AGATGTGAATATGACAACAC+CGG + chr1.1:8748050-8748069 MS.gene60269:CDS 35.0%
AGCATCTGTCGATGAATATT+TGG + chr1.1:8745590-8745609 MS.gene60269:CDS 35.0%
AGTTCTTCTGCTATGTTACT+AGG - chr1.1:8745720-8745739 None:intergenic 35.0%
ATATTCACATCTTCCTGCAA+AGG - chr1.1:8748042-8748061 None:intergenic 35.0%
ATTTGCTTTCACAGACTTGA+TGG - chr1.1:8749743-8749762 None:intergenic 35.0%
ATTTGTCAAAAGGCTAACGT+TGG + chr1.1:8748228-8748247 MS.gene60269:intron 35.0%
CTTCATCTACAGAAAATGAG+TGG + chr1.1:8749533-8749552 MS.gene60269:CDS 35.0%
CTTGATAAGCAGAAAAATGG+GGG - chr1.1:8746636-8746655 None:intergenic 35.0%
GAAAATCCTGCAACAATTGA+AGG + chr1.1:8745795-8745814 MS.gene60269:CDS 35.0%
GAAACATCTCAATGTAACGT+AGG + chr1.1:8745429-8745448 MS.gene60269:CDS 35.0%
GACAGAAAATTGTGACAATC+AGG + chr1.1:8749204-8749223 MS.gene60269:CDS 35.0%
GAGATTATCAGATGGTATAC+AGG + chr1.1:8747247-8747266 MS.gene60269:CDS 35.0%
GATATTACATCATGGACTCA+AGG + chr1.1:8746741-8746760 MS.gene60269:intron 35.0%
GATCAATCAAAAGAGACTAG+AGG - chr1.1:8746018-8746037 None:intergenic 35.0%
GATGGATGTATGAATGTCTT+TGG + chr1.1:8748273-8748292 MS.gene60269:CDS 35.0%
GATTATCAGATGGTATACAG+GGG + chr1.1:8747249-8747268 MS.gene60269:CDS 35.0%
GATTGATCATCCATATTGGA+CGG - chr1.1:8747329-8747348 None:intergenic 35.0%
GTACTGTGCTCTTCTTTAAT+TGG - chr1.1:8746433-8746452 None:intergenic 35.0%
GTGTAATGGCATTATCTACT+TGG + chr1.1:8746900-8746919 MS.gene60269:intron 35.0%
GTTTATAACAGTTGCTCAGA+AGG + chr1.1:8745521-8745540 MS.gene60269:CDS 35.0%
GTTTGGAGGTTTCAAAATTG+TGG + chr1.1:8746665-8746684 MS.gene60269:intron 35.0%
TATAGTTGACATCCACATGA+GGG + chr1.1:8749037-8749056 MS.gene60269:intron 35.0%
TCTCACTGTTTATCAAAGTG+CGG - chr1.1:8744822-8744841 None:intergenic 35.0%
TCTTGTGAAAACTCAGTATC+CGG - chr1.1:8744572-8744591 None:intergenic 35.0%
TGAAACACCTGATGTATTGA+AGG + chr1.1:8749705-8749724 MS.gene60269:CDS 35.0%
TGAGAGACTAAACTGAAAGT+TGG + chr1.1:8748975-8748994 MS.gene60269:intron 35.0%
TGAGTCCATGATGTAATATC+AGG - chr1.1:8746741-8746760 None:intergenic 35.0%
TGATGTATACTTGAACTTGG+GGG - chr1.1:8744203-8744222 None:intergenic 35.0%
TGATTCTTAGATCCTTAGAC+CGG + chr1.1:8744550-8744569 MS.gene60269:intron 35.0%
TGGTAACAGAGTAGAATTTC+AGG + chr1.1:8747844-8747863 MS.gene60269:CDS 35.0%
TGTACTGAATACCATATCTC+TGG + chr1.1:8744710-8744729 MS.gene60269:intron 35.0%
TTCTTAATCTGAGAAGCTTC+TGG - chr1.1:8744108-8744127 None:intergenic 35.0%
TTGATAAGCAGAAAAATGGG+GGG - chr1.1:8746635-8746654 None:intergenic 35.0%
TTGTTCCATTTGATCATCCA+CGG - chr1.1:8745622-8745641 None:intergenic 35.0%
TTTCAAATTCCTTAACAGCC+TGG - chr1.1:8746123-8746142 None:intergenic 35.0%
TTTGCTTTCACAGACTTGAT+GGG - chr1.1:8749742-8749761 None:intergenic 35.0%
TTTGTATGTATCAGGCTTGA+AGG + chr1.1:8745387-8745406 MS.gene60269:intron 35.0%
! AAATGCAGATTTTGTGGCAA+TGG + chr1.1:8749112-8749131 MS.gene60269:intron 35.0%
! ACTAAAAGTGTATTCAAGCC+TGG - chr1.1:8746383-8746402 None:intergenic 35.0%
! AGAAGAACTTTTGCCTTTGT+TGG + chr1.1:8745731-8745750 MS.gene60269:CDS 35.0%
! TAAACAGTGAGAGACTTGTT+TGG + chr1.1:8744830-8744849 MS.gene60269:intron 35.0%
! TCTCAAGAGCACATAAACTT+AGG + chr1.1:8745843-8745862 MS.gene60269:CDS 35.0%
! TGCAGTTACTGTGATTGTTT+TGG + chr1.1:8747779-8747798 MS.gene60269:intron 35.0%
! TTTCCGAGTATTGTGTTTCA+CGG - chr1.1:8745298-8745317 None:intergenic 35.0%
! TTTGCATATAGTGGAAAACG+TGG + chr1.1:8747289-8747308 MS.gene60269:CDS 35.0%
!! ACACAGTTTAACTTGTTGTC+TGG + chr1.1:8748353-8748372 MS.gene60269:intron 35.0%
!! CCTGCTAGCCTTAAAAAATT+AGG + chr1.1:8748000-8748019 MS.gene60269:intron 35.0%
!! CTACAAGGTTTTAGTCATGT+AGG + chr1.1:8746863-8746882 MS.gene60269:intron 35.0%
!! CTGAAAGTTGGTGTGAATTA+CGG + chr1.1:8748987-8749006 MS.gene60269:intron 35.0%
!! GATAACTAACTTTTTCCTGG+AGG - chr1.1:8747522-8747541 None:intergenic 35.0%
!! GATTCTAAAGTCCTTTGCAA+TGG + chr1.1:8749901-8749920 MS.gene60269:CDS 35.0%
!! TAAGGGCATCTCTTAGAATA+AGG + chr1.1:8746765-8746784 MS.gene60269:intron 35.0%
!!! CCTAATTTTTTAAGGCTAGC+AGG - chr1.1:8748003-8748022 None:intergenic 35.0%
!!! GCGTGGTTTTTTAGAAGATT+TGG - chr1.1:8749458-8749477 None:intergenic 35.0%
!!! TATTTTGATGTGACCTTTGC+AGG + chr1.1:8748026-8748045 MS.gene60269:intron 35.0%
!!! TCAAGTTTTGCTTTGTTTGG+AGG + chr1.1:8746651-8746670 MS.gene60269:intron 35.0%
AAAACTCAGTATCCGGTCTA+AGG - chr1.1:8744565-8744584 None:intergenic 40.0%
AAATGCACCTGATAAGAGGA+GGG + chr1.1:8747457-8747476 MS.gene60269:CDS 40.0%
AACACAGCACTGTCAAATAG+TGG - chr1.1:8744759-8744778 None:intergenic 40.0%
AATCCTCATTGCCATTGCAA+AGG - chr1.1:8749915-8749934 None:intergenic 40.0%
AATGCAAAAATGAGACGGTG+TGG - chr1.1:8744927-8744946 None:intergenic 40.0%
AATGTCTTTGGCAAGAGAGA+AGG + chr1.1:8748285-8748304 MS.gene60269:CDS 40.0%
AATTCCTTAACAGCCTGGAT+AGG - chr1.1:8746118-8746137 None:intergenic 40.0%
AATTTCAAGCTTCAGTGTGC+AGG + chr1.1:8746043-8746062 MS.gene60269:intron 40.0%
ACAGGTGTGAGATTATCAGA+TGG + chr1.1:8747239-8747258 MS.gene60269:CDS 40.0%
ACATCATGGACTCAAGGTTA+AGG + chr1.1:8746747-8746766 MS.gene60269:intron 40.0%
AGAATCCATCGACCTATATC+CGG + chr1.1:8747433-8747452 MS.gene60269:CDS 40.0%
ATAAACTTAGGCTCGAGTTC+AGG + chr1.1:8745855-8745874 MS.gene60269:CDS 40.0%
ATAGGATCAGGCATCAATTG+AGG - chr1.1:8746100-8746119 None:intergenic 40.0%
ATAGTTGACATCCACATGAG+GGG + chr1.1:8749038-8749057 MS.gene60269:intron 40.0%
ATCATCTAAGTTAGCGCTTG+GGG - chr1.1:8749650-8749669 None:intergenic 40.0%
ATGAGACTACAGTGGTGTAA+TGG + chr1.1:8746886-8746905 MS.gene60269:intron 40.0%
ATGCAAAAATGAGACGGTGT+GGG - chr1.1:8744926-8744945 None:intergenic 40.0%
ATTACCTCAGAACCATCTTG+TGG - chr1.1:8746193-8746212 None:intergenic 40.0%
ATTAGGCGTATGTGCATTGT+CGG + chr1.1:8744960-8744979 MS.gene60269:intron 40.0%
CAACATTGTTGAAGAAGGGT+TGG + chr1.1:8749163-8749182 MS.gene60269:CDS 40.0%
CATCATCTAAGTTAGCGCTT+GGG - chr1.1:8749651-8749670 None:intergenic 40.0%
CATCATGGACTCAAGGTTAA+GGG + chr1.1:8746748-8746767 MS.gene60269:intron 40.0%
CGAGTCCTGATATTACATCA+TGG + chr1.1:8746733-8746752 MS.gene60269:intron 40.0%
CTTGTCGTCTTCTTCATTTC+AGG + chr1.1:8745139-8745158 MS.gene60269:intron 40.0%
GAAGCCTTGACAGACTTTAT+TGG - chr1.1:8745200-8745219 None:intergenic 40.0%
GAAGCTTCCTTCAATACATC+AGG - chr1.1:8749715-8749734 None:intergenic 40.0%
GAGAGCAACATTGTTGAAGA+AGG + chr1.1:8749158-8749177 MS.gene60269:CDS 40.0%
GATGTATACTTGAACTTGGG+GGG - chr1.1:8744202-8744221 None:intergenic 40.0%
GCAACTGTTATAAACACCTC+TGG - chr1.1:8745516-8745535 None:intergenic 40.0%
GCTGTGTTCATGTACTTAAG+AGG + chr1.1:8744771-8744790 MS.gene60269:intron 40.0%
GTATAGTTGACATCCACATG+AGG + chr1.1:8749036-8749055 MS.gene60269:intron 40.0%
GTCATCATCACTAACTGAGT+CGG + chr1.1:8745659-8745678 MS.gene60269:CDS 40.0%
GTCTCCAATAAAGTCTGTCA+AGG + chr1.1:8745193-8745212 MS.gene60269:CDS 40.0%
GTGAAACACAATACTCGGAA+AGG + chr1.1:8745297-8745316 MS.gene60269:CDS 40.0%
TACCAACTCTCCAATAGATG+CGG + chr1.1:8749571-8749590 MS.gene60269:CDS 40.0%
TACGGATGCCATGATACTTT+AGG - chr1.1:8747037-8747056 None:intergenic 40.0%
TACTGGCAGCATAAAGCAAA+GGG - chr1.1:8748588-8748607 None:intergenic 40.0%
TCAGAGAATATCCCACAAGA+TGG + chr1.1:8746178-8746197 MS.gene60269:CDS 40.0%
TCATCATCTAAGTTAGCGCT+TGG - chr1.1:8749652-8749671 None:intergenic 40.0%
TCTGTAGATGAAGAACGTGT+AGG - chr1.1:8749526-8749545 None:intergenic 40.0%
TGTCAAGAACCCCAATCAAA+GGG - chr1.1:8744262-8744281 None:intergenic 40.0%
TGTTCCATTTGATCATCCAC+GGG - chr1.1:8745621-8745640 None:intergenic 40.0%
TTAATCAATGTTGTCCGTCG+TGG + chr1.1:8744623-8744642 MS.gene60269:intron 40.0%
TTACCTCAGAACCATCTTGT+GGG - chr1.1:8746192-8746211 None:intergenic 40.0%
TTACTGGCAGCATAAAGCAA+AGG - chr1.1:8748589-8748608 None:intergenic 40.0%
TTCTGTCAAGATAGGAGACT+CGG - chr1.1:8747417-8747436 None:intergenic 40.0%
TTCTTACAGTTGCACGTCTT+AGG - chr1.1:8747664-8747683 None:intergenic 40.0%
TTGAATTCCTCAGCATCTGT+GGG - chr1.1:8747488-8747507 None:intergenic 40.0%
TTGCAATGGCAATGAGGATT+CGG + chr1.1:8749915-8749934 MS.gene60269:CDS 40.0%
TTGGCTGGACAAATGCAAAA+AGG - chr1.1:8749392-8749411 None:intergenic 40.0%
TTTAAATGCAACCCAATGCC+TGG - chr1.1:8747179-8747198 None:intergenic 40.0%
! AGAACTTTTGCCTTTGTTGG+AGG + chr1.1:8745734-8745753 MS.gene60269:CDS 40.0%
! AGCAAATGCTTGTGGATTAC+GGG - chr1.1:8747903-8747922 None:intergenic 40.0%
! CTACTGAAGCATCAGTTTCA+TGG - chr1.1:8747376-8747395 None:intergenic 40.0%
! CTTTAGAGGTTAATGACTCC+AGG + chr1.1:8746362-8746381 MS.gene60269:intron 40.0%
! GAGCAAATGCTTGTGGATTA+CGG - chr1.1:8747904-8747923 None:intergenic 40.0%
! GGAGAAAAATGGTGCTGAAT+TGG + chr1.1:8745818-8745837 MS.gene60269:CDS 40.0%
! GGAGAAACTCTCTTTTGGAT+TGG - chr1.1:8749769-8749788 None:intergenic 40.0%
! TCGATGGATTCTGTCAAGAT+AGG - chr1.1:8747425-8747444 None:intergenic 40.0%
! TTCATCAGAAGGATTGGTGA+TGG - chr1.1:8744178-8744197 None:intergenic 40.0%
! TTTTTGCATTTGTCCAGCCA+AGG + chr1.1:8749391-8749410 MS.gene60269:intron 40.0%
!! ACAAGTACTGATGATGCCAA+TGG + chr1.1:8747637-8747656 MS.gene60269:CDS 40.0%
!! CATCTATTGGAGAGTTGGTA+TGG - chr1.1:8749571-8749590 None:intergenic 40.0%
!! CATTGCAACAATGGTGTTAC+AGG - chr1.1:8749263-8749282 None:intergenic 40.0%
!! CTATTTTTCGCAATCCACGA+CGG - chr1.1:8744640-8744659 None:intergenic 40.0%
!! TACTCAGAGCATTGCAACAA+TGG - chr1.1:8749272-8749291 None:intergenic 40.0%
!!! TACTGTGATTGTTTTGGTGC+TGG + chr1.1:8747785-8747804 MS.gene60269:CDS 40.0%
AACGTAGGAGACAACAGTCT+TGG + chr1.1:8745444-8745463 MS.gene60269:CDS 45.0%
AAGCAGCTTCCCCAAATTGT+AGG - chr1.1:8747067-8747086 None:intergenic 45.0%
AAGTTAGCGCTTGGGGTAAT+CGG - chr1.1:8749643-8749662 None:intergenic 45.0%
ACAGCAAGAGCTTAGTTACC+TGG - chr1.1:8745923-8745942 None:intergenic 45.0%
ACCATCTCTAGCATTCTACC+TGG - chr1.1:8748542-8748561 None:intergenic 45.0%
ACTGGCAGCATAAAGCAAAG+GGG - chr1.1:8748587-8748606 None:intergenic 45.0%
ACTTAAAAGTTGTGCTGGGC+TGG - chr1.1:8748458-8748477 None:intergenic 45.0%
AGCAAGAGCTTAGTTACCTG+GGG - chr1.1:8745921-8745940 None:intergenic 45.0%
AGCTGCACATGGTACAATCT+TGG - chr1.1:8747927-8747946 None:intergenic 45.0%
AGTCCTTTGCAATGGCAATG+AGG + chr1.1:8749909-8749928 MS.gene60269:CDS 45.0%
ATCCATATTGGACGGAGTTG+AGG - chr1.1:8747321-8747340 None:intergenic 45.0%
ATCCTCAACTCCGTCCAATA+TGG + chr1.1:8747316-8747335 MS.gene60269:CDS 45.0%
ATCTTGGGAGCAAATGCTTG+TGG - chr1.1:8747911-8747930 None:intergenic 45.0%
ATGGCCATTTGCATGCATCA+TGG + chr1.1:8746523-8746542 MS.gene60269:intron 45.0%
ATTGAGAGTTGAGGAGAGAG+AGG - chr1.1:8744145-8744164 None:intergenic 45.0%
ATTGATGCCTGATCCTATCC+AGG + chr1.1:8746102-8746121 MS.gene60269:CDS 45.0%
ATTTGCCGGATATAGGTCGA+TGG - chr1.1:8747441-8747460 None:intergenic 45.0%
CAAATGCACCTGATAAGAGG+AGG + chr1.1:8747456-8747475 MS.gene60269:CDS 45.0%
CAAATTGTAGGCAGCGTCTA+CGG - chr1.1:8747055-8747074 None:intergenic 45.0%
CAGCAAGAGCTTAGTTACCT+GGG - chr1.1:8745922-8745941 None:intergenic 45.0%
CATGTAGGATGAGACTACAG+TGG + chr1.1:8746878-8746897 MS.gene60269:intron 45.0%
CCACCGTGAAACACAATACT+CGG + chr1.1:8745292-8745311 MS.gene60269:CDS 45.0%
CCTAGTTGTGCTTCAACTAC+AGG + chr1.1:8747221-8747240 MS.gene60269:CDS 45.0%
CCTGTAGTTGAAGCACAACT+AGG - chr1.1:8747224-8747243 None:intergenic 45.0%
CTCTTATCAGGTGCATTTGC+CGG - chr1.1:8747455-8747474 None:intergenic 45.0%
GCTGCACATGGTACAATCTT+GGG - chr1.1:8747926-8747945 None:intergenic 45.0%
GCTGCCAGTAATAATCTCTG+CGG + chr1.1:8748598-8748617 MS.gene60269:intron 45.0%
GTAGACGCTGCCTACAATTT+GGG + chr1.1:8747054-8747073 MS.gene60269:CDS 45.0%
GTAGTTGAAGCACAACTAGG+TGG - chr1.1:8747221-8747240 None:intergenic 45.0%
GTCAAGAACCCCAATCAAAG+GGG - chr1.1:8744261-8744280 None:intergenic 45.0%
GTGTCAAGAACCCCAATCAA+AGG - chr1.1:8744263-8744282 None:intergenic 45.0%
GTTATAAACACCTCTGGCAG+TGG - chr1.1:8745510-8745529 None:intergenic 45.0%
GTTGAATTCCTCAGCATCTG+TGG - chr1.1:8747489-8747508 None:intergenic 45.0%
TAAAAAACCACGCAGCAGTC+TGG + chr1.1:8749465-8749484 MS.gene60269:CDS 45.0%
TACCGCATCTATTGGAGAGT+TGG - chr1.1:8749576-8749595 None:intergenic 45.0%
TAGACGCTGCCTACAATTTG+GGG + chr1.1:8747055-8747074 MS.gene60269:CDS 45.0%
TATGCTACCCCCCTTTGATT+GGG + chr1.1:8744249-8744268 MS.gene60269:intron 45.0%
TATTCATCGACAGATGCTGG+AGG - chr1.1:8745588-8745607 None:intergenic 45.0%
TCAAGAACCCCAATCAAAGG+GGG - chr1.1:8744260-8744279 None:intergenic 45.0%
TCCAGGTAGAATGCTAGAGA+TGG + chr1.1:8748538-8748557 MS.gene60269:intron 45.0%
TCTAGCATTCTACCTGGACT+TGG - chr1.1:8748536-8748555 None:intergenic 45.0%
TGAATATTTGGCTGATCCCG+TGG + chr1.1:8745602-8745621 MS.gene60269:CDS 45.0%
TGAATTCCTCAGCATCTGTG+GGG - chr1.1:8747487-8747506 None:intergenic 45.0%
TGATCCCGTGGATGATCAAA+TGG + chr1.1:8745614-8745633 MS.gene60269:CDS 45.0%
TGATCCTATCCAGGCTGTTA+AGG + chr1.1:8746111-8746130 MS.gene60269:CDS 45.0%
TGCAATGGCAATGAGGATTC+GGG + chr1.1:8749916-8749935 MS.gene60269:CDS 45.0%
TGCACCGCAGAGATTATTAC+TGG - chr1.1:8748605-8748624 None:intergenic 45.0%
TTAACAGCCTGGATAGGATC+AGG - chr1.1:8746112-8746131 None:intergenic 45.0%
TTACCTGGGGAAGTGAATCA+TGG - chr1.1:8745908-8745927 None:intergenic 45.0%
TTATGCTACCCCCCTTTGAT+TGG + chr1.1:8744248-8744267 MS.gene60269:intron 45.0%
TTCTCCCCTTCAATTGTTGC+AGG - chr1.1:8745804-8745823 None:intergenic 45.0%
TTGGTCCAATCCGAAGTAGA+TGG - chr1.1:8749801-8749820 None:intergenic 45.0%
! CGAGTATTGTGTTTCACGGT+GGG - chr1.1:8745294-8745313 None:intergenic 45.0%
! GAGTATTGTGTTTCACGGTG+GGG - chr1.1:8745293-8745312 None:intergenic 45.0%
! GGGTATTCGTGTCATTCTTG+AGG - chr1.1:8745554-8745573 None:intergenic 45.0%
! GTCCTTTCATTTGTGCCGAT+TGG + chr1.1:8749366-8749385 MS.gene60269:intron 45.0%
! GTGGAGGAGAAACTCTCTTT+TGG - chr1.1:8749774-8749793 None:intergenic 45.0%
! TAATCTCTGCGGTGCACTTT+TGG + chr1.1:8748609-8748628 MS.gene60269:intron 45.0%
! TATCCCACAAGATGGTTCTG+AGG + chr1.1:8746186-8746205 MS.gene60269:CDS 45.0%
! TTTTACGCACTTGTGCGTTG+TGG + chr1.1:8744794-8744813 MS.gene60269:intron 45.0%
!! ACAATGGTGTTACAGGTGAG+AGG - chr1.1:8749256-8749275 None:intergenic 45.0%
!! AGGACTTTAGAATCAGCGCA+AGG - chr1.1:8749895-8749914 None:intergenic 45.0%
!! ATCAGAAGGATTGGTGATGG+CGG - chr1.1:8744175-8744194 None:intergenic 45.0%
!! CAGGCTAGCCTAAAGTATCA+TGG + chr1.1:8747026-8747045 MS.gene60269:intron 45.0%
!! CTATTGGAGAGTTGGTATGG+TGG - chr1.1:8749568-8749587 None:intergenic 45.0%
!! GACTTTAGAATCAGCGCAAG+GGG - chr1.1:8749893-8749912 None:intergenic 45.0%
!! GCAAAGGGGTGTCATTTGTA+TGG - chr1.1:8748573-8748592 None:intergenic 45.0%
!! GGACTTTAGAATCAGCGCAA+GGG - chr1.1:8749894-8749913 None:intergenic 45.0%
!! TAGGGTTTGAGTTGAGGTTC+TGG - chr1.1:8748506-8748525 None:intergenic 45.0%
!! TTTGGTGCTGGAATCTTCTG+TGG + chr1.1:8747797-8747816 MS.gene60269:CDS 45.0%
!!! AACTTTTTCCTGGAGGTGCT+AGG - chr1.1:8747515-8747534 None:intergenic 45.0%
!! AATTTATATTAAAATTTGAT+AGG + chr1.1:8745685-8745704 MS.gene60269:CDS 5.0%
AAATGCAACCCAATGCCTGG+TGG - chr1.1:8747176-8747195 None:intergenic 50.0%
AACAGTCTTGGTGAAGCTCG+TGG + chr1.1:8745456-8745475 MS.gene60269:CDS 50.0%
AAGGCTTCTCATGCGACACA+TGG + chr1.1:8745212-8745231 MS.gene60269:CDS 50.0%
ACTTGGGGGGATTCATCAGA+AGG - chr1.1:8744189-8744208 None:intergenic 50.0%
AGCATTCTACCTGGACTTGG+TGG - chr1.1:8748533-8748552 None:intergenic 50.0%
AGGCTTCTCATGCGACACAT+GGG + chr1.1:8745213-8745232 MS.gene60269:CDS 50.0%
AGTGGAACATCAGCTGCACA+TGG - chr1.1:8747938-8747957 None:intergenic 50.0%
ATGCTACCCCCCTTTGATTG+GGG + chr1.1:8744250-8744269 MS.gene60269:intron 50.0%
CAAGAACCCCAATCAAAGGG+GGG - chr1.1:8744259-8744278 None:intergenic 50.0%
CAGAGCCATCTACTTCGGAT+TGG + chr1.1:8749793-8749812 MS.gene60269:CDS 50.0%
CAGGTGCATTTGCCGGATAT+AGG - chr1.1:8747448-8747467 None:intergenic 50.0%
CATGCGACACATGGGTTTCT+CGG + chr1.1:8745221-8745240 MS.gene60269:CDS 50.0%
CCATTTGCATGCATCATGGC+AGG + chr1.1:8746527-8746546 MS.gene60269:intron 50.0%
CCTGCCATGATGCATGCAAA+TGG - chr1.1:8746530-8746549 None:intergenic 50.0%
CGGCAAATGCACCTGATAAG+AGG + chr1.1:8747453-8747472 MS.gene60269:CDS 50.0%
CGGTATTCGCCAGTTATCTG+GGG + chr1.1:8749591-8749610 MS.gene60269:CDS 50.0%
CGTAGACGCTGCCTACAATT+TGG + chr1.1:8747053-8747072 MS.gene60269:CDS 50.0%
CTCCACAGAGCCATCTACTT+CGG + chr1.1:8749788-8749807 MS.gene60269:CDS 50.0%
CTGGCGAATACCGCATCTAT+TGG - chr1.1:8749584-8749603 None:intergenic 50.0%
GAAGCTGCTTCCGTTGTTCT+TGG + chr1.1:8747077-8747096 MS.gene60269:CDS 50.0%
GCATCAGCTAGGCACAAAAG+AGG + chr1.1:8748072-8748091 MS.gene60269:CDS 50.0%
GCGGTATTCGCCAGTTATCT+GGG + chr1.1:8749590-8749609 MS.gene60269:CDS 50.0%
GGAGACTTGAATACGAGAGG+CGG - chr1.1:8745257-8745276 None:intergenic 50.0%
GGCCAATCGGCACAAATGAA+AGG - chr1.1:8749371-8749390 None:intergenic 50.0%
GGGGGATTCATCAGAAGGAT+TGG - chr1.1:8744184-8744203 None:intergenic 50.0%
GGTATTCGCCAGTTATCTGG+GGG + chr1.1:8749592-8749611 MS.gene60269:CDS 50.0%
GTTGCACGTCTTAGGTCCAT+TGG - chr1.1:8747656-8747675 None:intergenic 50.0%
TCCTCAGGTGGCTTGAAAAG+TGG + chr1.1:8749823-8749842 MS.gene60269:CDS 50.0%
TCGACTGGATGTCGATGTGA+TGG + chr1.1:8748255-8748274 MS.gene60269:CDS 50.0%
TGCGGTATTCGCCAGTTATC+TGG + chr1.1:8749589-8749608 MS.gene60269:CDS 50.0%
TTGCCATGATTCACTTCCCC+AGG + chr1.1:8745902-8745921 MS.gene60269:CDS 50.0%
TTTCCAAGCCACCAGGCATT+GGG + chr1.1:8747165-8747184 MS.gene60269:CDS 50.0%
! ACAGGTGAGAGGTGATTTGC+TGG - chr1.1:8749245-8749264 None:intergenic 50.0%
! ATCCGAAGTAGATGGCTCTG+TGG - chr1.1:8749793-8749812 None:intergenic 50.0%
! CCGAGTATTGTGTTTCACGG+TGG - chr1.1:8745295-8745314 None:intergenic 50.0%
! CTTTTGTGCCTAGCTGATGC+CGG - chr1.1:8748072-8748091 None:intergenic 50.0%
!! ATTCTACCTGGACTTGGTGG+TGG - chr1.1:8748530-8748549 None:intergenic 50.0%
!! GGTGCACTTTTGGAAGTGGT+GGG + chr1.1:8748619-8748638 MS.gene60269:intron 50.0%
!! TTCTACCTGGACTTGGTGGT+GGG - chr1.1:8748529-8748548 None:intergenic 50.0%
!!! TTTTCCTGGAGGTGCTAGGA+TGG - chr1.1:8747511-8747530 None:intergenic 50.0%
ACATCCACATGAGGGGAGAG+TGG + chr1.1:8749045-8749064 MS.gene60269:intron 55.0%
ACTTTGCACCCTGCTTGCCT+TGG - chr1.1:8749411-8749430 None:intergenic 55.0%
ATTGGACCAAGCTCCTCAGG+TGG + chr1.1:8749811-8749830 MS.gene60269:CDS 55.0%
CAGGTGGCTTGAAAAGTGGC+AGG + chr1.1:8749827-8749846 MS.gene60269:CDS 55.0%
CATCCACATGAGGGGAGAGT+GGG + chr1.1:8749046-8749065 MS.gene60269:intron 55.0%
CGCGGAGACTTGAATACGAG+AGG - chr1.1:8745260-8745279 None:intergenic 55.0%
GAAGAGAGCCCCCAGATAAC+TGG - chr1.1:8749603-8749622 None:intergenic 55.0%
GAATCAGCGCAAGGGGTCAA+CGG - chr1.1:8749886-8749905 None:intergenic 55.0%
GCGTATGTGCATTGTCGGAC+TGG + chr1.1:8744965-8744984 MS.gene60269:intron 55.0%
GCTAACGTTGGATGCTCGAC+TGG + chr1.1:8748240-8748259 MS.gene60269:CDS 55.0%
GCTGGAATCTTCTGTGGCGA+CGG + chr1.1:8747803-8747822 MS.gene60269:CDS 55.0%
GTGACAGTTTCCAAGCCACC+AGG + chr1.1:8747158-8747177 MS.gene60269:CDS 55.0%
GTTTCCAAGCCACCAGGCAT+TGG + chr1.1:8747164-8747183 MS.gene60269:CDS 55.0%
TATCTGGGGGCTCTCTTCGT+TGG + chr1.1:8749605-8749624 MS.gene60269:CDS 55.0%
TCAACCATCCTAGCACCTCC+AGG + chr1.1:8747504-8747523 MS.gene60269:CDS 55.0%
TGACAACACCGGCATCAGCT+AGG + chr1.1:8748061-8748080 MS.gene60269:CDS 55.0%
TTCAAGCCACCTGAGGAGCT+TGG - chr1.1:8749820-8749839 None:intergenic 55.0%
TTCTCAACAGCCACTGCCAG+AGG + chr1.1:8745497-8745516 MS.gene60269:CDS 55.0%
TTGTCCAGCCAAGGCAAGCA+GGG + chr1.1:8749400-8749419 MS.gene60269:intron 55.0%
TTTGTCCAGCCAAGGCAAGC+AGG + chr1.1:8749399-8749418 MS.gene60269:intron 55.0%
! CGAAGTAGATGGCTCTGTGG+AGG - chr1.1:8749790-8749809 None:intergenic 55.0%
!! AGAAGGATTGGTGATGGCGG+TGG - chr1.1:8744172-8744191 None:intergenic 55.0%
!! CGGTGCACTTTTGGAAGTGG+TGG + chr1.1:8748618-8748637 MS.gene60269:intron 55.0%
!! CTGCGGTGCACTTTTGGAAG+TGG + chr1.1:8748615-8748634 MS.gene60269:intron 55.0%
!! GGTGGGTAGGGTTTGAGTTG+AGG - chr1.1:8748512-8748531 None:intergenic 55.0%
!!! GCCACTTTTCAAGCCACCTG+AGG - chr1.1:8749827-8749846 None:intergenic 55.0%
ATGCTGGAGGACTGCTGCTC+TGG - chr1.1:8745575-8745594 None:intergenic 60.0%
CAACCCAATGCCTGGTGGCT+TGG - chr1.1:8747171-8747190 None:intergenic 60.0%
GAATGTGCCAGACTGCTGCG+TGG - chr1.1:8749475-8749494 None:intergenic 60.0%
GGGCGTACCCTCCTCTTATC+AGG - chr1.1:8747467-8747486 None:intergenic 60.0%
GGTTGTGCTTGCGAAGGCTG+TGG + chr1.1:8747824-8747843 MS.gene60269:CDS 60.0%
TGCTGGAGGACTGCTGCTCT+GGG - chr1.1:8745574-8745593 None:intergenic 60.0%
! CGGATTGGACCAAGCTCCTC+AGG + chr1.1:8749808-8749827 MS.gene60269:CDS 60.0%
! GGTGGCGGCATTGAGAGTTG+AGG - chr1.1:8744154-8744173 None:intergenic 60.0%
!! ACCTGGACTTGGTGGTGGGT+AGG - chr1.1:8748525-8748544 None:intergenic 60.0%
!! AGGATTGGTGATGGCGGTGG+CGG - chr1.1:8744169-8744188 None:intergenic 60.0%
!! CCTGGACTTGGTGGTGGGTA+GGG - chr1.1:8748524-8748543 None:intergenic 60.0%
CCCTACCCACCACCAAGTCC+AGG + chr1.1:8748521-8748540 MS.gene60269:intron 65.0%
GCACCCACTCTCCCCTCATG+TGG - chr1.1:8749052-8749071 None:intergenic 65.0%
GGCGACGGTTGTGCTTGCGA+AGG + chr1.1:8747818-8747837 MS.gene60269:CDS 65.0%
GGGGTCAACGGCGGGAATGA+AGG - chr1.1:8749874-8749893 None:intergenic 65.0%
GGTACGCCCCACAGATGCTG+AGG + chr1.1:8747478-8747497 MS.gene60269:CDS 65.0%
TCAGCGCAAGGGGTCAACGG+CGG - chr1.1:8749883-8749902 None:intergenic 65.0%
TGCACCCTGCTTGCCTTGGC+TGG - chr1.1:8749407-8749426 None:intergenic 65.0%
!! CGGTGGGGAGCACTGATACG+CGG - chr1.1:8745278-8745297 None:intergenic 65.0%
CAGCGCAAGGGGTCAACGGC+GGG - chr1.1:8749882-8749901 None:intergenic 70.0%
GGGGGCTCTCTTCGTTGGCG+CGG + chr1.1:8749610-8749629 MS.gene60269:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 8744096 8749963 8744096 ID=MS.gene60269
chr1.1 mRNA 8744096 8749963 8744096 ID=MS.gene60269.t1;Parent=MS.gene60269
chr1.1 exon 8744096 8744212 8744096 ID=MS.gene60269.t1.exon1;Parent=MS.gene60269.t1
chr1.1 CDS 8744096 8744212 8744096 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8745161 8745318 8745161 ID=MS.gene60269.t1.exon2;Parent=MS.gene60269.t1
chr1.1 CDS 8745161 8745318 8745161 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8745401 8745923 8745401 ID=MS.gene60269.t1.exon3;Parent=MS.gene60269.t1
chr1.1 CDS 8745401 8745923 8745401 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8746058 8746207 8746058 ID=MS.gene60269.t1.exon4;Parent=MS.gene60269.t1
chr1.1 CDS 8746058 8746207 8746058 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8747029 8747531 8747029 ID=MS.gene60269.t1.exon5;Parent=MS.gene60269.t1
chr1.1 CDS 8747029 8747531 8747029 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8747630 8747701 8747630 ID=MS.gene60269.t1.exon6;Parent=MS.gene60269.t1
chr1.1 CDS 8747630 8747701 8747630 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8747784 8747967 8747784 ID=MS.gene60269.t1.exon7;Parent=MS.gene60269.t1
chr1.1 CDS 8747784 8747967 8747784 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8748048 8748146 8748048 ID=MS.gene60269.t1.exon8;Parent=MS.gene60269.t1
chr1.1 CDS 8748048 8748146 8748048 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8748240 8748306 8748240 ID=MS.gene60269.t1.exon9;Parent=MS.gene60269.t1
chr1.1 CDS 8748240 8748306 8748240 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8749120 8749288 8749120 ID=MS.gene60269.t1.exon10;Parent=MS.gene60269.t1
chr1.1 CDS 8749120 8749288 8749120 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
chr1.1 exon 8749408 8749963 8749408 ID=MS.gene60269.t1.exon11;Parent=MS.gene60269.t1
chr1.1 CDS 8749408 8749963 8749408 ID=cds.MS.gene60269.t1;Parent=MS.gene60269.t1
Gene Sequence

>MS.gene60269

ATGGATTCTCCAGAAGCTTCTCAGATTAAGAACATTTCTTCTTCTTCCTCTCTCTCCTCAACTCTCAATGCCGCCACCGCCATCACCAATCCTTCTGATGAATCCCCCCAAGTTCAAGTATACATCATTTCATTTTCATACCAATTAATTAATTATGCTACCCCCCTTTGATTGGGGTTCTTGACACGATTTTCGAGTTTAATTCTTCTTCTTTACGATTATTATGTTATGGAACTTCATCATGATATGATACTATCAATGTTAACTCTGTCTGTCTTTATGTTTGGAATCTAATCTAATGAATTTATACCATTTTATTTCATTTATTGTGTTAGACATGTTTGGAATTACATTTGTTTTCGATGCCTACTTTTTGTTTCATTCCATTCATCAAACAACATTGTCTCTTCTTTTTTTGCATCAAAATGAATATAAGGTTATCAATTAGATCGGTTGATTCTTAGATCCTTAGACCGGATACTGAGTTTTCACAAGAAAATAAAAAAAGGTTATCTATTAAGTAAGTTTTAATCAATGTTGTCCGTCGTGGATTGCGAAAAATAGCATTTTGTTCAAATTCTACTATGTTACGGCGCCGTTATTTGACATTGCATTGTACTGAATACCATATCTCTGGAACAATATTCTGCTACACTATAGCCACTATTTGACAGTGCTGTGTTCATGTACTTAAGAGGTTTTACGCACTTGTGCGTTGTGGTGCCGCACTTTGATAAACAGTGAGAGACTTGTTTGGAATTATATTTGTTTGATTGGATAAAATTCACTAGACTTGCTTTTGGTCTATCCTCTCTTATGTTAATTAACCCACACCGTCTCATTTTTGCATTAAAATGCTTATCAATTAGGCGTATGTGCATTGTCGGACTGGTATCTTGTGTTGATTGTGTTTCTAGAACCGTCTTTTTTGTTTAGAGATGTCTAGACTAGAGAGTTGTGTATTATTTTTGTTGACTTGTGTAGTATTTTTCAGACTCTTTCATTTCATTTCTAGTATCACGAAAAAGGAATGAAATTTACATCTTGTCGTCTTCTTCATTTCAGGAATCTCCCTTTTTGAGATTTGTCAACACTCTGTCTCCAATAAAGTCTGTCAAGGCTTCTCATGCGACACATGGGTTTCTCGGACTCAATTCTCCGCCTCTCGTATTCAAGTCTCCGCGTATCAGTGCTCCCCACCGTGAAACACAATACTCGGAAAGGTTTGTGACTTCAATTTTGTGTCCGTGTCTTTTGTTATTGACGATGCGCTTGCTGTTTATTGACAAAATTTGTATGTATCAGGCTTGAAGGTACCCATTTATCAGACACAGAAACATCTCAATGTAACGTAGGAGACAACAGTCTTGGTGAAGCTCGTGGTGATCTGAAGAAATTGAATTCTCAACAGCCACTGCCAGAGGTGTTTATAACAGTTGCTCAGAAGGATTTTGACCTCAAGAATGACACGAATACCCAGAGCAGCAGTCCTCCAGCATCTGTCGATGAATATTTGGCTGATCCCGTGGATGATCAAATGGAACAATATACTGATGCGGTTGAGTCATCATCACTAACTGAGTCGGAGAAATTTATATTAAAATTTGATAGGAGTGACGGTCCTAGTAACATAGCAGAAGAACTTTTGCCTTTGTTGGAGGAATCTAATATGGTTCATCAAGAAAGGACAACATATGTTGAAAATCCTGCAACAATTGAAGGGGAGAAAAATGGTGCTGAATTGGTTTCTCAAGAGCACATAAACTTAGGCTCGAGTTCAGGTGCAGATGTTTTTGATAAACAATATTGCCATGATTCACTTCCCCAGGTAACTAAGCTCTTGCTGTCTATACTCTATATTTATAATGCTGATATAGGGACGTCAGTTTTCATATATATGATTAGTGTGAGCTAGATGTCCTCTAGTCTCTTTTGATTGATCTATAAAATTTCAAGCTTCAGTGTGCAGGAAATGATCAACAGCATCAAAGTGACTGTGCACCTCAATTGATGCCTGATCCTATCCAGGCTGTTAAGGAATTTGAAAATTGCAGTGAGATGGTGTCATCCTCACAAGTAAATTCAGAGAATATCCCACAAGATGGTTCTGAGGTAATTGATTTTTTTTCTTTCAGGTTTATTGCATTCCTCTGATGAATATATGAACTTTTGTTTAGATTTTGCTGTCTTTTCATGCTTTCCCTCCTCTCTGAATGATTTTGTTTATGTCTGTGTTCTTTTAGTCTTTAACACTAAATACTAGTCTCTTTAGAGGTTAATGACTCCAGGCTTGAATACACTTTTAGTTTTTTTAATCATTGGCATCTATTATCTCCAATTAAAGAAGAGCACAGTACATGTATTTTGTTTGCACTTGGCACATTCAATCTTATAAATCTAATAATGCTTCATTGATCTAGTTTGTTTATGGCCATTTGCATGCATCATGGCAGGATTTTTTTAACAAAATTAGCAGAAGTGGTATACTGCATATTTCTGCATAGGTGCTGTAATCAGATTTCTCTAACTGAAAAATCCCCCCATTTTTCTGCTTATCAAGTTTTGCTTTGTTTGGAGGTTTCAAAATTGTGGATCTCTGATAAATACAGTTTTTTCAACAAGATTGCTAATAAAATGCGAGTCCTGATATTACATCATGGACTCAAGGTTAAGGGCATCTCTTAGAATAAGGAAGTCAGTCTTCTGTTTATGAATATATAGCATGAAATATCTTTTGAACAAAGAAAAGTCAGCAATAATTTATTGGCTACAAGGTTTTAGTCATGTAGGATGAGACTACAGTGGTGTAATGGCATTATCTACTTGGCAATCATACACAGAGTTGCATTTTGATTATCAGGAACTTGCATTTTATTGTTCAATTAAATGAAGATTTTCTTTCTGCAATATAATAATTGTTACAGTCAATGCAGGCTAGCCTAAAGTATCATGGCATCCGTAGACGCTGCCTACAATTTGGGGAAGCTGCTTCCGTTGTTCTTGGAAGTAATAAGTCTCATGTGAAATTGAATACAACTTCAAGCAACGCAAAAATGGTTTCTGTGACAGTTTCCAAGCCACCAGGCATTGGGTTGCATTTAAATAGCATTATAAATGCAATGCCACCTAGTTGTGCTTCAACTACAGGTGTGAGATTATCAGATGGTATACAGGGGTCCAAATCTTCTATAAGTTTGCATATAGTGGAAAACGTGGCAAGATCCTCAACTCCGTCCAATATGGATGATCAATCTTTTATTGATACTAAGAATGAGAGCCATGAAACTGATGCTTCAGTAGTTGCAGATTCTTTCATTTCCGAGTCTCCTATCTTGACAGAATCCATCGACCTATATCCGGCAAATGCACCTGATAAGAGGAGGGTACGCCCCACAGATGCTGAGGAATTCAACCATCCTAGCACCTCCAGGAAAAAGTTAGTTATCATGATCTTTCTCATAGGTCATTATTTTTATTCTTTACCTGTTTGCTAGTTTTACCAAATATTACCAAATATTGCATTGCTCTATATAGGAAGAAAACAAGTACTGATGATGCCAATGGACCTAAGACGTGCAACTGTAAGAAGAGTAAATGTTTGAAACTGTGAGTAGATTTTAAATATGTTTTGATACCTTACTTTCTATGATATGCAATATCTATGTATTTTGATTTGAGTACTTTGCAGTTACTGTGATTGTTTTGGTGCTGGAATCTTCTGTGGCGACGGTTGTGCTTGCGAAGGCTGTGGTAACAGAGTAGAATTTCAGGATAAAGTTGTTGAAACAAAACAGCAAATTGAATCCCGTAATCCACAAGCATTTGCTCCCAAGATTGTACCATGTGCAGCTGATGTTCCACTGAATAATATGGTATAAGATCTTCATATATCACTGTTGTTCAACCTGCTAGCCTTAAAAAATTAGGTGATATTTTGATGTGACCTTTGCAGGAAGATGTGAATATGACAACACCGGCATCAGCTAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAAAGTGTACAAAAAAATACTGTGAATGTTTTCAGGTTGTGTATTTTATCCATATTTCTATATGCTCTAAATATTTTTACTGTGTCTGCTAATATATTTTTTATTTTATTTTAAATATTTGTCAAAAGGCTAACGTTGGATGCTCGACTGGATGTCGATGTGATGGATGTATGAATGTCTTTGGCAAGAGAGAAGGTTAGAGCTCATAGTATGAATAGCTATTTTAAATACTTAATGCACTACACAGTTTAACTTGTTGTCTGGTCAGTATAAATGTTATGGATTGATGTTGGGAGGTTTTGATGTTACCAAATACTAGTCCTTATAAGGAAAATTGTTGAGGCCAGCCCAGCACAACTTTTAAGTTTTTTAATGATGTGTAGATTTGAATCCAGAACCTCAACTCAAACCCTACCCACCACCAAGTCCAGGTAGAATGCTAGAGATGGTCATATTTGCCATACAAATGACACCCCTTTGCTTTATGCTGCCAGTAATAATCTCTGCGGTGCACTTTTGGAAGTGGTGGGTTTGTTTTAAAAGAAGTATTAGGTCTCGCGAACTTATGAATTGAATCAATTACGATTAAATAACTTTTTAGTGTTTCTAATGTACACTATTCCCAATTTAGTTTCTAAAATTTCTAGTTGATTTCAATCCCTGAAATACAATAACATAATTTTTGGTACTTCTTTTGGTTTGAGTTCTTGTAACTTTGTCCACATTAAAATGAATACATATGGTCCACATGTTATAGGAATTTATTTCAGCATGGACAAATATTTTGAAAAACTAAATTAAAAGAATGAAAATCAAAAGCAATTTTTCTTAAATTTTAGGGGTTCAAACTGGCTAGAATTTCTTGAGAGACTAAACTGAAAGTTGGTGTGAATTACGGAGACTAGAATTATTTTAGCTTTTAAAGTATAGTTGACATCCACATGAGGGGAGAGTGGGTGCAGATCATTAAATGTTTCTGTTAATGTATTACACATTTTTTAAATGCAGATTTTGTGGCAATGGAACATGCTTCTAGCAATGAAAGGGAGAGCAACATTGTTGAAGAAGGGTTGGATGACAAACTGCACAAAAGACAGAAAATTGTGACAATCAGGACAGACTTGTTACGACCAGCAAATCACCTCTCACCTGTAACACCATTGTTGCAATGCTCTGAGTAAGATTGCTTACATTACAAGTTTTTCTATGTTGTATAAATAAGAAGTTATATTCTGAGTATTTAATTATTTTGACGTCCTTTCATTTGTGCCGATTGGCCTTTTTGCATTTGTCCAGCCAAGGCAAGCAGGGTGCAAAGTCTAGACATACTTCTGCAAATTTGACCAAATCTTCTAAAAAACCACGCAGCAGTCTGGCACATTCGAAGTCGAATGATTCTCAAAAGAATGCACCTACACGTTCTTCATCTACAGAAAATGAGTGGATAGATCTTCCACCATACCAACTCTCCAATAGATGCGGTATTCGCCAGTTATCTGGGGGCTCTCTTCGTTGGCGCGGTAGTTCACCGATTACCCCAAGCGCTAACTTAGATGATGAATCAGATGGTAAGCTCTTTGACATTATAGAAGATGAAACACCTGATGTATTGAAGGAAGCTTCAACTCCCATCAAGTCTGTGAAAGCAAATTCTCCAATCCAAAAGAGAGTTTCTCCTCCACAGAGCCATCTACTTCGGATTGGACCAAGCTCCTCAGGTGGCTTGAAAAGTGGCAGGAAATTTATATTGCAATCTGTTCCTTCATTCCCGCCGTTGACCCCTTGCGCTGATTCTAAAGTCCTTTGCAATGGCAATGAGGATTCGGGTAACAGCACAGATAAAGTGACATAA
Protein sequence

>MS.gene60269.t1

MDSPEASQIKNISSSSSLSSTLNAATAITNPSDESPQVQESPFLRFVNTLSPIKSVKASHATHGFLGLNSPPLVFKSPRISAPHRETQYSERLEGTHLSDTETSQCNVGDNSLGEARGDLKKLNSQQPLPEVFITVAQKDFDLKNDTNTQSSSPPASVDEYLADPVDDQMEQYTDAVESSSLTESEKFILKFDRSDGPSNIAEELLPLLEESNMVHQERTTYVENPATIEGEKNGAELVSQEHINLGSSSGADVFDKQYCHDSLPQCAGNDQQHQSDCAPQLMPDPIQAVKEFENCSEMVSSSQVNSENIPQDGSEASLKYHGIRRRCLQFGEAASVVLGSNKSHVKLNTTSSNAKMVSVTVSKPPGIGLHLNSIINAMPPSCASTTGVRLSDGIQGSKSSISLHIVENVARSSTPSNMDDQSFIDTKNESHETDASVVADSFISESPILTESIDLYPANAPDKRRVRPTDAEEFNHPSTSRKKKKTSTDDANGPKTCNCKKSKCLKLYCDCFGAGIFCGDGCACEGCGNRVEFQDKVVETKQQIESRNPQAFAPKIVPCAADVPLNNMEDVNMTTPASARHKRGCNCKRSKCTKKYCECFQANVGCSTGCRCDGCMNVFGKREDFVAMEHASSNERESNIVEEGLDDKLHKRQKIVTIRTDLLRPANHLSPVTPLLQCSDQGKQGAKSRHTSANLTKSSKKPRSSLAHSKSNDSQKNAPTRSSSTENEWIDLPPYQLSNRCGIRQLSGGSLRWRGSSPITPSANLDDESDGKLFDIIEDETPDVLKEASTPIKSVKANSPIQKRVSPPQSHLLRIGPSSSGGLKSGRKFILQSVPSFPPLTPCADSKVLCNGNEDSGNSTDKVT