Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70314.t1 | RHN43011.1 | 73.8 | 585 | 139 | 6 | 4 | 576 | 4 | 586 | 1.00E-244 | 856.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70314.t1 | P08770 | 26.8 | 630 | 401 | 21 | 28 | 620 | 142 | 748 | 1.5e-47 | 192.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70314.t1 | A0A396GS75 | 73.8 | 585 | 139 | 6 | 4 | 576 | 4 | 586 | 7.3e-245 | 856.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene70314 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene049166 | MS.gene70314 | 0.811936 | 5.45E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene70314 | 0.808453 | 3.07E-50 | -1.69E-46 |
| MS.gene049283 | MS.gene70314 | 0.811177 | 7.98E-51 | -1.69E-46 |
| MS.gene049786 | MS.gene70314 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene050084 | MS.gene70314 | 0.800215 | 1.60E-48 | -1.69E-46 |
| MS.gene050085 | MS.gene70314 | 0.817553 | 3.11E-52 | -1.69E-46 |
| MS.gene050114 | MS.gene70314 | 0.825935 | 3.57E-54 | -1.69E-46 |
| MS.gene050317 | MS.gene70314 | 0.814397 | 1.57E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene70314 | 0.80141 | 9.12E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene70314 | 0.840819 | 6.91E-58 | -1.69E-46 |
| MS.gene050941 | MS.gene70314 | 0.812608 | 3.89E-51 | -1.69E-46 |
| MS.gene051003 | MS.gene70314 | 0.834118 | 3.61E-56 | -1.69E-46 |
| MS.gene051184 | MS.gene70314 | 0.814258 | 1.69E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene70314 | 0.821491 | 3.93E-53 | -1.69E-46 |
| MS.gene051655 | MS.gene70314 | 0.803499 | 3.39E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene70314 | -0.800564 | 1.36E-48 | -1.69E-46 |
| MS.gene052342 | MS.gene70314 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene052434 | MS.gene70314 | 0.828291 | 9.75E-55 | -1.69E-46 |
| MS.gene053058 | MS.gene70314 | 0.828653 | 7.98E-55 | -1.69E-46 |
| MS.gene053295 | MS.gene70314 | 0.815274 | 1.01E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene70314 | 0.803878 | 2.82E-49 | -1.69E-46 |
| MS.gene053456 | MS.gene70314 | 0.807132 | 5.87E-50 | -1.69E-46 |
| MS.gene053564 | MS.gene70314 | 0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene053726 | MS.gene70314 | 0.808362 | 3.22E-50 | -1.69E-46 |
| MS.gene054823 | MS.gene70314 | 0.800423 | 1.45E-48 | -1.69E-46 |
| MS.gene05517 | MS.gene70314 | 0.805762 | 1.14E-49 | -1.69E-46 |
| MS.gene055441 | MS.gene70314 | 0.802964 | 4.37E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene70314 | 0.811722 | 6.07E-51 | -1.69E-46 |
| MS.gene056181 | MS.gene70314 | 0.839313 | 1.71E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene70314 | 0.843413 | 1.42E-58 | -1.69E-46 |
| MS.gene056849 | MS.gene70314 | 0.856864 | 2.41E-62 | -1.69E-46 |
| MS.gene056986 | MS.gene70314 | 0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene057451 | MS.gene70314 | -0.803365 | 3.61E-49 | -1.69E-46 |
| MS.gene057452 | MS.gene70314 | -0.82864 | 8.03E-55 | -1.69E-46 |
| MS.gene057890 | MS.gene70314 | -0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene70314 | 0.810947 | 8.95E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene70314 | 0.801421 | 9.08E-49 | -1.69E-46 |
| MS.gene058646 | MS.gene70314 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene70314 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene058708 | MS.gene70314 | -0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene058758 | MS.gene70314 | 0.800107 | 1.68E-48 | -1.69E-46 |
| MS.gene059146 | MS.gene70314 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene059872 | MS.gene70314 | -0.802696 | 4.96E-49 | -1.69E-46 |
| MS.gene06010 | MS.gene70314 | 0.822037 | 2.93E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene70314 | 0.801915 | 7.19E-49 | -1.69E-46 |
| MS.gene060296 | MS.gene70314 | 0.848362 | 6.43E-60 | -1.69E-46 |
| MS.gene060297 | MS.gene70314 | 0.807194 | 5.69E-50 | -1.69E-46 |
| MS.gene060851 | MS.gene70314 | 0.812585 | 3.94E-51 | -1.69E-46 |
| MS.gene060852 | MS.gene70314 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene70314 | 0.830201 | 3.36E-55 | -1.69E-46 |
| MS.gene060870 | MS.gene70314 | 0.824378 | 8.34E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene70314 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene06121 | MS.gene70314 | 0.801039 | 1.09E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70314.t1 | MTR_8g091950 | 87.143 | 140 | 17 | 1 | 569 | 708 | 2 | 140 | 1.64e-78 | 247 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70314.t1 | AT3G42170 | 26.080 | 625 | 375 | 22 | 4 | 578 | 18 | 605 | 1.35e-52 | 193 |
| MS.gene70314.t1 | AT3G42170 | 26.080 | 625 | 375 | 22 | 4 | 578 | 40 | 627 | 1.51e-52 | 194 |
| MS.gene70314.t1 | AT5G64820 | 34.586 | 133 | 74 | 3 | 579 | 702 | 16 | 144 | 2.56e-14 | 71.2 |
| MS.gene70314.t1 | AT1G16850 | 40.000 | 95 | 52 | 1 | 606 | 695 | 41 | 135 | 1.58e-11 | 63.5 |
Find 100 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTGAGTGGGATGAATTT+AGG | 0.159892 | 4.1:+9442523 | MS.gene70314:CDS |
| CTACAAACTTACTCCAAATT+TGG | 0.167313 | 4.1:-9446283 | None:intergenic |
| TGTGGGAAACAGTTTATTTC+TGG | 0.178494 | 4.1:+9442342 | MS.gene70314:CDS |
| CTCATTAAAAGAAGCAAATT+TGG | 0.195198 | 4.1:-9442553 | None:intergenic |
| TGCTCGTGTCTTGGACCTTA+TGG | 0.214270 | 4.1:+9443022 | MS.gene70314:CDS |
| ATGTAAATGCTTTACAATAT+TGG | 0.232405 | 4.1:+9443961 | MS.gene70314:CDS |
| AACGGTGTCAGTTAGTAATT+TGG | 0.243488 | 4.1:-9446179 | None:intergenic |
| TATGGATGATCAATGGAATT+TGG | 0.253112 | 4.1:+9442749 | MS.gene70314:CDS |
| GAGAATCTTTGGCCACATTT+TGG | 0.261276 | 4.1:-9446138 | None:intergenic |
| CACCAAATAAGAAGCTTAAA+AGG | 0.263653 | 4.1:+9442253 | MS.gene70314:CDS |
| TGTTGAGTGGGATGAATTTA+GGG | 0.292056 | 4.1:+9442524 | MS.gene70314:CDS |
| TATGGTTGAAGAGAGTTTAA+AGG | 0.292459 | 4.1:+9443040 | MS.gene70314:CDS |
| AAAACAGCTGGCTGCAGTTA+AGG | 0.299415 | 4.1:+9442650 | MS.gene70314:CDS |
| AGCTTAAAAGGTTTAATGTT+TGG | 0.315159 | 4.1:+9442265 | MS.gene70314:CDS |
| TATAGCATGATTCTTGCTTT+TGG | 0.324684 | 4.1:+9443530 | MS.gene70314:CDS |
| ATGTGGATGTGTCCGGTAAA+TGG | 0.329056 | 4.1:+9443189 | MS.gene70314:CDS |
| TCCTCTTTCCCACTCTTCAC+TGG | 0.340787 | 4.1:-9443306 | None:intergenic |
| TTTCATAATCAAAGGACATT+TGG | 0.349734 | 4.1:-9442400 | None:intergenic |
| GAAGGTGATTGATTGTTTGC+AGG | 0.362557 | 4.1:+9442833 | MS.gene70314:CDS |
| TGTGTTTGAGCTTTCATTGT+TGG | 0.387670 | 4.1:+9442679 | MS.gene70314:CDS |
| CAGGGGTTACATGCTGGAAT+TGG | 0.395685 | 4.1:-9446099 | None:intergenic |
| TGAAATTGATGCAACTTTGT+TGG | 0.402252 | 4.1:-9443687 | None:intergenic |
| TCATAGGATGGTTCGTGATT+CGG | 0.405498 | 4.1:+9442461 | MS.gene70314:CDS |
| TCCCACTCAACAAACTGAAA+TGG | 0.408842 | 4.1:-9442513 | None:intergenic |
| AAAGGTAGTAAGTGGTGTAT+TGG | 0.412099 | 4.1:+9443058 | MS.gene70314:CDS |
| TCCATTTCAGTTTGTTGAGT+GGG | 0.419318 | 4.1:+9442512 | MS.gene70314:CDS |
| AAATCAGCAGCTGAATTTGT+TGG | 0.419411 | 4.1:+9446846 | MS.gene70314:CDS |
| CTTTCCCACTCTTCACTGGA+TGG | 0.428816 | 4.1:-9443302 | None:intergenic |
| ATAAGTAGAAACCCATTTAC+CGG | 0.433597 | 4.1:-9443201 | None:intergenic |
| AAACAGCTGGCTGCAGTTAA+GGG | 0.437970 | 4.1:+9442651 | MS.gene70314:CDS |
| CAGTTTATTTCTGGAAGGAC+AGG | 0.438009 | 4.1:+9442351 | MS.gene70314:CDS |
| GTCATAGGAATATGTTGAAA+AGG | 0.438311 | 4.1:+9443866 | MS.gene70314:intron |
| ACTTCTTCCGCTTCTTCTCA+TGG | 0.439368 | 4.1:+9442702 | MS.gene70314:CDS |
| TGATTGATTGTTTGCAGGAA+TGG | 0.447807 | 4.1:+9442838 | MS.gene70314:CDS |
| GATTGATTGTTTGCAGGAAT+GGG | 0.451798 | 4.1:+9442839 | MS.gene70314:CDS |
| TGGCCACCTTCATCAGCAGC+AGG | 0.453286 | 4.1:-9446118 | None:intergenic |
| CAGCAGCAGGGGTTACATGC+TGG | 0.456273 | 4.1:-9446105 | None:intergenic |
| AAGGAAGACAGACTTGCTTT+CGG | 0.459823 | 4.1:+9443751 | MS.gene70314:CDS |
| GAAAGTTTACTTGCTTGAAA+AGG | 0.460044 | 4.1:+9442617 | MS.gene70314:CDS |
| TCTAAATAAGTATGCAATGT+AGG | 0.460686 | 4.1:-9443395 | None:intergenic |
| CAATGTGTTGAAGAAGTTGA+TGG | 0.462685 | 4.1:+9443143 | MS.gene70314:CDS |
| TTAAACTCTCTTCAACCATA+AGG | 0.463297 | 4.1:-9443037 | None:intergenic |
| TTCAATTAGATTACCTGTGA+GGG | 0.465347 | 4.1:+9443706 | MS.gene70314:CDS |
| TTTGTTAAAATTGAAGCAGA+TGG | 0.474429 | 4.1:+9442294 | MS.gene70314:CDS |
| AGATGACAAGATAAGAGATA+TGG | 0.477086 | 4.1:+9443466 | MS.gene70314:CDS |
| TCCAGTGAAGAGTGGGAAAG+AGG | 0.481839 | 4.1:+9443305 | MS.gene70314:CDS |
| TGTGGATGTGTCCGGTAAAT+GGG | 0.486423 | 4.1:+9443190 | MS.gene70314:CDS |
| TAAGTGTTGTGCTCGTGTCT+TGG | 0.489616 | 4.1:+9443013 | MS.gene70314:CDS |
| TTTCCCACTCTTCACTGGAT+GGG | 0.492201 | 4.1:-9443301 | None:intergenic |
| AAGGACATTTGGTAATATGT+TGG | 0.494056 | 4.1:-9442389 | None:intergenic |
| GAGAGTTTAAAGGTAGTAAG+TGG | 0.500460 | 4.1:+9443050 | MS.gene70314:CDS |
| AAAATCCCATGAAAGCTCTT+GGG | 0.505602 | 4.1:+9446213 | MS.gene70314:CDS |
| AAAAGCAAAGAATCAGTTGA+AGG | 0.507499 | 4.1:+9446816 | MS.gene70314:CDS |
| GTAACCCCTGCTGCTGATGA+AGG | 0.514461 | 4.1:+9446112 | MS.gene70314:CDS |
| CAAACTTACTCCAAATTTGG+TGG | 0.516547 | 4.1:-9446280 | None:intergenic |
| TGTGTGAATGTAAAACTTGT+GGG | 0.519867 | 4.1:+9442325 | MS.gene70314:CDS |
| ATTTAAACCCATGTGTTCAA+AGG | 0.528848 | 4.1:-9443258 | None:intergenic |
| GGCCACCTTCATCAGCAGCA+GGG | 0.529923 | 4.1:-9446117 | None:intergenic |
| GAGAGGCTAGAAAGATATGC+AGG | 0.531332 | 4.1:+9443888 | MS.gene70314:CDS |
| CATCCCTAGCCAACCTTGCA+AGG | 0.536180 | 4.1:-9444010 | None:intergenic |
| AAAACTGCATCTGAAGATCA+TGG | 0.536891 | 4.1:-9446255 | None:intergenic |
| AGTAGATTCAGAAATTATGT+TGG | 0.537129 | 4.1:-9443369 | None:intergenic |
| TTCCATTTCAGTTTGTTGAG+TGG | 0.541712 | 4.1:+9442511 | MS.gene70314:CDS |
| AGACACTACAGATTCTGATA+AGG | 0.542472 | 4.1:+9446902 | MS.gene70314:CDS |
| AGCTCAAAACTATCATGTGA+AGG | 0.546391 | 4.1:-9442804 | None:intergenic |
| TCGCAGTGCCTTTGAACACA+TGG | 0.551660 | 4.1:+9443250 | MS.gene70314:CDS |
| GGAAACAGTTTATTTCTGGA+AGG | 0.552696 | 4.1:+9442346 | MS.gene70314:CDS |
| GTGGTGTATTGGACAAGATA+AGG | 0.558276 | 4.1:+9443069 | MS.gene70314:CDS |
| GCCACCTTCATCAGCAGCAG+GGG | 0.559916 | 4.1:-9446116 | None:intergenic |
| GGCTTGCATGTGGATGTGTC+CGG | 0.562567 | 4.1:+9443182 | MS.gene70314:CDS |
| ATACGAGATTTCATAATCAA+AGG | 0.562920 | 4.1:-9442408 | None:intergenic |
| TTTCTCCCAAGAGCTTTCAT+GGG | 0.569638 | 4.1:-9446218 | None:intergenic |
| AAGAGTATTATATCCTTGCA+AGG | 0.570372 | 4.1:+9443997 | MS.gene70314:CDS |
| CGCAGTGCCTTTGAACACAT+GGG | 0.570409 | 4.1:+9443251 | MS.gene70314:CDS |
| AATATAACCATGAGAAGAAG+CGG | 0.571617 | 4.1:-9442709 | None:intergenic |
| TATTGGTGAGAGCTGTAACT+CGG | 0.573522 | 4.1:+9442206 | MS.gene70314:CDS |
| TACAGAGACAGTAAAAGATA+AGG | 0.576841 | 4.1:+9443619 | MS.gene70314:CDS |
| ATGTGTGAATGTAAAACTTG+TGG | 0.579067 | 4.1:+9442324 | MS.gene70314:CDS |
| AGGAATATGTTGAAAAGGAG+AGG | 0.590759 | 4.1:+9443871 | MS.gene70314:intron |
| ATTGATTGTTTGCAGGAATG+GGG | 0.593807 | 4.1:+9442840 | MS.gene70314:CDS |
| TTGCCCATCCAGTGAAGAGT+GGG | 0.595769 | 4.1:+9443298 | MS.gene70314:CDS |
| TGTAACTCGGCATATTCTGA+TGG | 0.599813 | 4.1:+9442219 | MS.gene70314:CDS |
| TTTCAATTAGATTACCTGTG+AGG | 0.604805 | 4.1:+9443705 | MS.gene70314:CDS |
| TATTTGAAAGAGAGAGACAG+AGG | 0.606953 | 4.1:+9443933 | MS.gene70314:CDS |
| ATGTGAGTGTGTCAAACTCT+AGG | 0.607095 | 4.1:+9443105 | MS.gene70314:CDS |
| TGTCAGTTAGTAATTTGGAA+AGG | 0.607458 | 4.1:-9446174 | None:intergenic |
| AATCCATAAGACAAAAGAGA+AGG | 0.608547 | 4.1:+9446875 | MS.gene70314:CDS |
| GATGGCAGTGATAGCAGCGA+TGG | 0.612489 | 4.1:+9443161 | MS.gene70314:CDS |
| GCTCAAAACTATCATGTGAA+GGG | 0.613016 | 4.1:-9442803 | None:intergenic |
| ATTGCCCATCCAGTGAAGAG+TGG | 0.614031 | 4.1:+9443297 | MS.gene70314:CDS |
| GTAAAACGAGAATCCCTCAC+AGG | 0.619596 | 4.1:-9443719 | None:intergenic |
| GTTAGTAATTTGGAAAGGCG+TGG | 0.619952 | 4.1:-9446169 | None:intergenic |
| CAGCTGGCTGCAGTTAAGGG+TGG | 0.640291 | 4.1:+9442654 | MS.gene70314:CDS |
| AAGATAAGGTGAGCAATGTG+AGG | 0.641913 | 4.1:+9443633 | MS.gene70314:CDS |
| AGGGGAAAAGGAGAACATGA+AGG | 0.650023 | 4.1:+9446762 | MS.gene70314:CDS |
| ACCCCTGCTGCTGATGAAGG+TGG | 0.657057 | 4.1:+9446115 | MS.gene70314:CDS |
| TAGCAGCGATGGCTTGCATG+TGG | 0.661586 | 4.1:+9443172 | MS.gene70314:CDS |
| TGATGAAGGTGGCCAAAATG+TGG | 0.672717 | 4.1:+9446126 | MS.gene70314:CDS |
| AAAGATTCGAACTTCAAACG+AGG | 0.704807 | 4.1:-9443566 | None:intergenic |
| AGGCTAGAAAGATATGCAGG+TGG | 0.719348 | 4.1:+9443891 | MS.gene70314:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATATAACAATATATTA+TGG | - | chr4.1:9445145-9445164 | None:intergenic | 10.0% |
| !! | ATATATATGAATATTAATGT+AGG | + | chr4.1:9446707-9446726 | MS.gene70314:intron | 10.0% |
| !! | ATTGTAACTTAAAAAAATTA+AGG | - | chr4.1:9445323-9445342 | None:intergenic | 10.0% |
| !! | TTCATATATATACATTAAAT+TGG | - | chr4.1:9446698-9446717 | None:intergenic | 10.0% |
| !!! | AAACAAATATTGAAAATTTT+GGG | + | chr4.1:9444867-9444886 | MS.gene70314:intron | 10.0% |
| !!! | AAATAATTTCTCTATATTTT+GGG | + | chr4.1:9445816-9445835 | MS.gene70314:intron | 10.0% |
| !!! | TAAATAATTTCTCTATATTT+TGG | + | chr4.1:9445815-9445834 | MS.gene70314:intron | 10.0% |
| !!! | TTTTAAGTTACAATTAATTT+TGG | + | chr4.1:9445329-9445348 | MS.gene70314:intron | 10.0% |
| !! | AAAATAGTTTAATGTTGATA+TGG | + | chr4.1:9446422-9446441 | MS.gene70314:intron | 15.0% |
| !! | AATTAAAAACTAATTGTTCA+AGG | - | chr4.1:9446005-9446024 | None:intergenic | 15.0% |
| !! | ATAACAATATATTATGGATA+TGG | - | chr4.1:9445139-9445158 | None:intergenic | 15.0% |
| !! | TGTAAATTCATAAAAATGAT+TGG | - | chr4.1:9446497-9446516 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTTCTATTACTA+TGG | + | chr4.1:9442872-9442891 | MS.gene70314:CDS | 15.0% |
| !!! | ATATATATATGATTTGTTGA+CGG | + | chr4.1:9446612-9446631 | MS.gene70314:intron | 15.0% |
| !!! | CAAACAAATATTGAAAATTT+TGG | + | chr4.1:9444866-9444885 | MS.gene70314:intron | 15.0% |
| !!! | GTTTGAAATATTCAAATATA+TGG | + | chr4.1:9445859-9445878 | MS.gene70314:intron | 15.0% |
| !!! | TGATGTTATGTTTTTTTTTT+TGG | - | chr4.1:9445659-9445678 | None:intergenic | 15.0% |
| !! | AGTTATATAGTTTGAACATT+AGG | + | chr4.1:9445181-9445200 | MS.gene70314:intron | 20.0% |
| !! | ATAACATCATCAATACAATA+TGG | + | chr4.1:9445670-9445689 | MS.gene70314:intron | 20.0% |
| !! | ATATGAATATTAATGTAGGT+AGG | + | chr4.1:9446711-9446730 | MS.gene70314:intron | 20.0% |
| !! | ATCATTAAGCATAACATTAT+TGG | + | chr4.1:9445557-9445576 | MS.gene70314:intron | 20.0% |
| !! | ATGTAAATGCTTTACAATAT+TGG | + | chr4.1:9443961-9443980 | MS.gene70314:CDS | 20.0% |
| !! | CAAATATCATTTCTCATTAT+AGG | - | chr4.1:9444478-9444497 | None:intergenic | 20.0% |
| !! | CAATACAATCTTGAAATTAT+AGG | + | chr4.1:9446344-9446363 | MS.gene70314:intron | 20.0% |
| !! | CAATGTTCTTAAAATTAGAA+GGG | - | chr4.1:9445751-9445770 | None:intergenic | 20.0% |
| !! | GGAAAAAGAAATATTTAAAG+AGG | + | chr4.1:9445350-9445369 | MS.gene70314:intron | 20.0% |
| !! | TAAAAAAAAATTACGTGCTT+AGG | - | chr4.1:9445382-9445401 | None:intergenic | 20.0% |
| !!! | ATTTTCAATATTTGTTTGCT+TGG | - | chr4.1:9444864-9444883 | None:intergenic | 20.0% |
| !!! | CAAAAGTCTATTTCATTTTT+AGG | + | chr4.1:9446311-9446330 | MS.gene70314:intron | 20.0% |
| !!! | CTTATTTAGATCATATTTTG+CGG | + | chr4.1:9443408-9443427 | MS.gene70314:CDS | 20.0% |
| !!! | TATGTTTTTTTTTTTGGTAG+TGG | - | chr4.1:9445653-9445672 | None:intergenic | 20.0% |
| !!! | TCTTTGATTTAAATTGTCAT+AGG | + | chr4.1:9443851-9443870 | MS.gene70314:intron | 20.0% |
| !!! | TGTATTTGTTGTGATAATTA+TGG | - | chr4.1:9445711-9445730 | None:intergenic | 20.0% |
| !!! | TTAAAATGTTTTTCTAGAGA+TGG | - | chr4.1:9442996-9443015 | None:intergenic | 20.0% |
| !!! | TTATGACTGAATATTTTTCA+AGG | - | chr4.1:9446546-9446565 | None:intergenic | 20.0% |
| ! | AAAAAGAAGAAAAAGTAGGA+TGG | - | chr4.1:9446062-9446081 | None:intergenic | 25.0% |
| ! | AAAACTGAAGATTCATAGAT+TGG | + | chr4.1:9444376-9444395 | MS.gene70314:intron | 25.0% |
| ! | AAGTATCTGTACGAAAAATT+AGG | + | chr4.1:9443590-9443609 | MS.gene70314:CDS | 25.0% |
| ! | ACCTCAAAAAAATTGATCAT+AGG | + | chr4.1:9442445-9442464 | MS.gene70314:CDS | 25.0% |
| ! | AGCTTAAAAGGTTTAATGTT+TGG | + | chr4.1:9442265-9442284 | MS.gene70314:CDS | 25.0% |
| ! | AGTAGATTCAGAAATTATGT+TGG | - | chr4.1:9443372-9443391 | None:intergenic | 25.0% |
| ! | ATACGAGATTTCATAATCAA+AGG | - | chr4.1:9442411-9442430 | None:intergenic | 25.0% |
| ! | CAAAAAAATTGATCATAGGA+TGG | + | chr4.1:9442449-9442468 | MS.gene70314:CDS | 25.0% |
| ! | CCAATGTTCTTAAAATTAGA+AGG | - | chr4.1:9445752-9445771 | None:intergenic | 25.0% |
| ! | CTCATTAAAAGAAGCAAATT+TGG | - | chr4.1:9442556-9442575 | None:intergenic | 25.0% |
| ! | GTGTTTATAATCTTCAGATA+CGG | + | chr4.1:9444696-9444715 | MS.gene70314:intron | 25.0% |
| ! | TCTAAATAAGTATGCAATGT+AGG | - | chr4.1:9443398-9443417 | None:intergenic | 25.0% |
| ! | TGATGTTGACATTTATTCTA+AGG | + | chr4.1:9445100-9445119 | MS.gene70314:intron | 25.0% |
| ! | TGCATAATATATGCAAGATT+CGG | + | chr4.1:9445613-9445632 | MS.gene70314:intron | 25.0% |
| ! | TGCTAAAAAGAAGAAAAAGT+AGG | - | chr4.1:9446066-9446085 | None:intergenic | 25.0% |
| ! | TTGCGATAAAATTTACCAAT+AGG | - | chr4.1:9444179-9444198 | None:intergenic | 25.0% |
| ! | TTTCATAATCAAAGGACATT+TGG | - | chr4.1:9442403-9442422 | None:intergenic | 25.0% |
| ! | TTTGTTAAAATTGAAGCAGA+TGG | + | chr4.1:9442294-9442313 | MS.gene70314:CDS | 25.0% |
| !! | AACCTTTTAAGCTTCTTATT+TGG | - | chr4.1:9442258-9442277 | None:intergenic | 25.0% |
| !! | CATTTTAAATCATGCAGAAA+AGG | + | chr4.1:9445781-9445800 | MS.gene70314:intron | 25.0% |
| !! | TACTTTAACAGCTCATTTTA+TGG | + | chr4.1:9442731-9442750 | MS.gene70314:CDS | 25.0% |
| !!! | AATCTTCAGTTTTGTTTTCA+TGG | - | chr4.1:9444369-9444388 | None:intergenic | 25.0% |
| !!! | CAAATTTGCTTCTTTTAATG+AGG | + | chr4.1:9442554-9442573 | MS.gene70314:CDS | 25.0% |
| !!! | CCTTCTAATTTTAAGAACAT+TGG | + | chr4.1:9445749-9445768 | MS.gene70314:intron | 25.0% |
| !!! | GTATCTATTTTTCAGTTTCA+GGG | + | chr4.1:9446743-9446762 | MS.gene70314:intron | 25.0% |
| !!! | GTTTTTAATTAGCATTAGCA+TGG | + | chr4.1:9446015-9446034 | MS.gene70314:intron | 25.0% |
| !!! | TATCTATTTTTCAGTTTCAG+GGG | + | chr4.1:9446744-9446763 | MS.gene70314:intron | 25.0% |
| !!! | TCCTATGATCAATTTTTTTG+AGG | - | chr4.1:9442449-9442468 | None:intergenic | 25.0% |
| !!! | TGTATCTATTTTTCAGTTTC+AGG | + | chr4.1:9446742-9446761 | MS.gene70314:intron | 25.0% |
| AAAAGCAAAGAATCAGTTGA+AGG | + | chr4.1:9446816-9446835 | MS.gene70314:CDS | 30.0% | |
| AATATAACCATGAGAAGAAG+CGG | - | chr4.1:9442712-9442731 | None:intergenic | 30.0% | |
| AATCCATAAGACAAAAGAGA+AGG | + | chr4.1:9446875-9446894 | MS.gene70314:CDS | 30.0% | |
| AGAAGTTGTCACAAATTAGT+TGG | - | chr4.1:9444502-9444521 | None:intergenic | 30.0% | |
| AGAGAAAAAAAAAGGAAGAG+AGG | - | chr4.1:9444565-9444584 | None:intergenic | 30.0% | |
| AGAGAGAGAGAGAAAAAAAA+AGG | - | chr4.1:9444573-9444592 | None:intergenic | 30.0% | |
| AGATGACAAGATAAGAGATA+TGG | + | chr4.1:9443466-9443485 | MS.gene70314:CDS | 30.0% | |
| AGTTGTTTGCTCAACAATTA+TGG | + | chr4.1:9445071-9445090 | MS.gene70314:intron | 30.0% | |
| ATAAGTAGAAACCCATTTAC+CGG | - | chr4.1:9443204-9443223 | None:intergenic | 30.0% | |
| ATACAAAATCCTAGAACTTC+TGG | - | chr4.1:9444745-9444764 | None:intergenic | 30.0% | |
| ATCTATAAATGCATGCTAAC+TGG | - | chr4.1:9444993-9445012 | None:intergenic | 30.0% | |
| ATGTGTGAATGTAAAACTTG+TGG | + | chr4.1:9442324-9442343 | MS.gene70314:CDS | 30.0% | |
| ATTGAGGAGACAAGAAAAAT+TGG | + | chr4.1:9444304-9444323 | MS.gene70314:intron | 30.0% | |
| ATTTAAACCCATGTGTTCAA+AGG | - | chr4.1:9443261-9443280 | None:intergenic | 30.0% | |
| CACCAAATAAGAAGCTTAAA+AGG | + | chr4.1:9442253-9442272 | MS.gene70314:CDS | 30.0% | |
| CATAATATATGCAAGATTCG+GGG | + | chr4.1:9445615-9445634 | MS.gene70314:intron | 30.0% | |
| CATATCAACACAGATCAATT+TGG | + | chr4.1:9444274-9444293 | MS.gene70314:intron | 30.0% | |
| CTACAAACTTACTCCAAATT+TGG | - | chr4.1:9446286-9446305 | None:intergenic | 30.0% | |
| CTCGACATATAATATGTAGT+TGG | + | chr4.1:9444674-9444693 | MS.gene70314:intron | 30.0% | |
| GAAAGTTTACTTGCTTGAAA+AGG | + | chr4.1:9442617-9442636 | MS.gene70314:CDS | 30.0% | |
| GAGAAAAAAAAAGGAAGAGA+GGG | - | chr4.1:9444564-9444583 | None:intergenic | 30.0% | |
| GCATAATATATGCAAGATTC+GGG | + | chr4.1:9445614-9445633 | MS.gene70314:intron | 30.0% | |
| GGATAAATTGAAAAAACAGC+TGG | + | chr4.1:9442638-9442657 | MS.gene70314:CDS | 30.0% | |
| GTCATAGGAATATGTTGAAA+AGG | + | chr4.1:9443866-9443885 | MS.gene70314:intron | 30.0% | |
| TACAGAGACAGTAAAAGATA+AGG | + | chr4.1:9443619-9443638 | MS.gene70314:CDS | 30.0% | |
| TATATGTCTGACTTTAGACA+TGG | - | chr4.1:9446597-9446616 | None:intergenic | 30.0% | |
| TATGGATGATCAATGGAATT+TGG | + | chr4.1:9442749-9442768 | MS.gene70314:CDS | 30.0% | |
| TATGGTTGAAGAGAGTTTAA+AGG | + | chr4.1:9443040-9443059 | MS.gene70314:CDS | 30.0% | |
| TGAAATTGATGCAACTTTGT+TGG | - | chr4.1:9443690-9443709 | None:intergenic | 30.0% | |
| TGCTCTCATAATTGGTTATT+TGG | + | chr4.1:9444146-9444165 | MS.gene70314:intron | 30.0% | |
| TGTCAGTTAGTAATTTGGAA+AGG | - | chr4.1:9446177-9446196 | None:intergenic | 30.0% | |
| TGTGTGAATGTAAAACTTGT+GGG | + | chr4.1:9442325-9442344 | MS.gene70314:CDS | 30.0% | |
| TTAAACTCTCTTCAACCATA+AGG | - | chr4.1:9443040-9443059 | None:intergenic | 30.0% | |
| TTCAATTAGATTACCTGTGA+GGG | + | chr4.1:9443706-9443725 | MS.gene70314:CDS | 30.0% | |
| TTTCAATTAGATTACCTGTG+AGG | + | chr4.1:9443705-9443724 | MS.gene70314:CDS | 30.0% | |
| TTTGTTTGCTTGGATCATTT+AGG | - | chr4.1:9444854-9444873 | None:intergenic | 30.0% | |
| ! | AAGGACATTTGGTAATATGT+TGG | - | chr4.1:9442392-9442411 | None:intergenic | 30.0% |
| ! | CTCATTTTATGGATGATCAA+TGG | + | chr4.1:9442742-9442761 | MS.gene70314:CDS | 30.0% |
| ! | TATAGCATGATTCTTGCTTT+TGG | + | chr4.1:9443530-9443549 | MS.gene70314:CDS | 30.0% |
| ! | TTTTTCTTTTTTCCTCCCAA+AGG | + | chr4.1:9444769-9444788 | MS.gene70314:intron | 30.0% |
| !! | AAGAGTATTATATCCTTGCA+AGG | + | chr4.1:9443997-9444016 | MS.gene70314:CDS | 30.0% |
| !! | CTTTTAAGCTTCTTATTTGG+TGG | - | chr4.1:9442255-9442274 | None:intergenic | 30.0% |
| !!! | AGAAGTTCTAGGATTTTGTA+TGG | + | chr4.1:9444744-9444763 | MS.gene70314:intron | 30.0% |
| !!! | ATGATAGTTTTGAGCTATCA+AGG | + | chr4.1:9442811-9442830 | MS.gene70314:CDS | 30.0% |
| !!! | GAAAATTTTGGGACATACTA+GGG | + | chr4.1:9444878-9444897 | MS.gene70314:intron | 30.0% |
| !!! | GAAGTTCTAGGATTTTGTAT+GGG | + | chr4.1:9444745-9444764 | MS.gene70314:intron | 30.0% |
| !!! | TGAAAATTTTGGGACATACT+AGG | + | chr4.1:9444877-9444896 | MS.gene70314:intron | 30.0% |
| !!! | TTGATTTTTCAAGTTTTGCG+AGG | - | chr4.1:9442922-9442941 | None:intergenic | 30.0% |
| !!! | TTTTTTGAGGTTGAAATGCT+TGG | - | chr4.1:9442436-9442455 | None:intergenic | 30.0% |
| AAAAATCCCATGAAAGCTCT+TGG | + | chr4.1:9446212-9446231 | MS.gene70314:CDS | 35.0% | |
| AAAACTGCATCTGAAGATCA+TGG | - | chr4.1:9446258-9446277 | None:intergenic | 35.0% | |
| AAAATCCCATGAAAGCTCTT+GGG | + | chr4.1:9446213-9446232 | MS.gene70314:CDS | 35.0% | |
| AAAGATTCGAACTTCAAACG+AGG | - | chr4.1:9443569-9443588 | None:intergenic | 35.0% | |
| AAAGGTAGTAAGTGGTGTAT+TGG | + | chr4.1:9443058-9443077 | MS.gene70314:CDS | 35.0% | |
| AAATCAGCAGCTGAATTTGT+TGG | + | chr4.1:9446846-9446865 | MS.gene70314:CDS | 35.0% | |
| AGACACTACAGATTCTGATA+AGG | + | chr4.1:9446902-9446921 | MS.gene70314:CDS | 35.0% | |
| AGCTCAAAACTATCATGTGA+AGG | - | chr4.1:9442807-9442826 | None:intergenic | 35.0% | |
| AGGAATATGTTGAAAAGGAG+AGG | + | chr4.1:9443871-9443890 | MS.gene70314:intron | 35.0% | |
| ATATAGACTTCCACAGTAGA+AGG | - | chr4.1:9444948-9444967 | None:intergenic | 35.0% | |
| ATTGATTGTTTGCAGGAATG+GGG | + | chr4.1:9442840-9442859 | MS.gene70314:CDS | 35.0% | |
| CAAACTTACTCCAAATTTGG+TGG | - | chr4.1:9446283-9446302 | None:intergenic | 35.0% | |
| CAATGTGTTGAAGAAGTTGA+TGG | + | chr4.1:9443143-9443162 | MS.gene70314:CDS | 35.0% | |
| CACAGTAGAAGGATAAAATC+AGG | - | chr4.1:9444937-9444956 | None:intergenic | 35.0% | |
| CGGTTGTATTTGATCAAACA+TGG | + | chr4.1:9444716-9444735 | MS.gene70314:intron | 35.0% | |
| CTGAAGATTCATAGATTGGA+AGG | + | chr4.1:9444380-9444399 | MS.gene70314:intron | 35.0% | |
| GAAACGTATGCTAAGGTATA+TGG | - | chr4.1:9445970-9445989 | None:intergenic | 35.0% | |
| GAGAGTTTAAAGGTAGTAAG+TGG | + | chr4.1:9443050-9443069 | MS.gene70314:CDS | 35.0% | |
| GATATGAGAAACGTATGCTA+AGG | - | chr4.1:9445977-9445996 | None:intergenic | 35.0% | |
| GATTGATTGTTTGCAGGAAT+GGG | + | chr4.1:9442839-9442858 | MS.gene70314:CDS | 35.0% | |
| GCTCAAAACTATCATGTGAA+GGG | - | chr4.1:9442806-9442825 | None:intergenic | 35.0% | |
| GTATTATATCCTTGCAAGGT+TGG | + | chr4.1:9444001-9444020 | MS.gene70314:intron | 35.0% | |
| GTCACAAAAGTTGTCTCAAA+TGG | + | chr4.1:9444634-9444653 | MS.gene70314:intron | 35.0% | |
| TATTTGAAAGAGAGAGACAG+AGG | + | chr4.1:9443933-9443952 | MS.gene70314:CDS | 35.0% | |
| TGAGCTTAGTTCAATTGGTA+AGG | + | chr4.1:9445586-9445605 | MS.gene70314:intron | 35.0% | |
| TGATTGATTGTTTGCAGGAA+TGG | + | chr4.1:9442838-9442857 | MS.gene70314:CDS | 35.0% | |
| TGTGGGAAACAGTTTATTTC+TGG | + | chr4.1:9442342-9442361 | MS.gene70314:CDS | 35.0% | |
| TGTGTTTGAGCTTTCATTGT+TGG | + | chr4.1:9442679-9442698 | MS.gene70314:CDS | 35.0% | |
| TGTTGAGTGGGATGAATTTA+GGG | + | chr4.1:9442524-9442543 | MS.gene70314:CDS | 35.0% | |
| TTGTTCAAAATACAGTTGCC+AGG | - | chr4.1:9444083-9444102 | None:intergenic | 35.0% | |
| TTGTTGAGTGGGATGAATTT+AGG | + | chr4.1:9442523-9442542 | MS.gene70314:CDS | 35.0% | |
| ! | CTGATTTTATCCTTCTACTG+TGG | + | chr4.1:9444935-9444954 | MS.gene70314:intron | 35.0% |
| ! | TCACCTTCTCTTTTGTCTTA+TGG | - | chr4.1:9446881-9446900 | None:intergenic | 35.0% |
| ! | TTATTTGGCTTCTCACCTAT+TGG | + | chr4.1:9444161-9444180 | MS.gene70314:intron | 35.0% |
| !! | GGAAACAGTTTATTTCTGGA+AGG | + | chr4.1:9442346-9442365 | MS.gene70314:CDS | 35.0% |
| !! | TCCATTTCAGTTTGTTGAGT+GGG | + | chr4.1:9442512-9442531 | MS.gene70314:CDS | 35.0% |
| !! | TGGTTTTTCTGGAGAATCTT+TGG | - | chr4.1:9446152-9446171 | None:intergenic | 35.0% |
| !! | TTCCATTTCAGTTTGTTGAG+TGG | + | chr4.1:9442511-9442530 | MS.gene70314:CDS | 35.0% |
| !! | TTTTTCAGTTTCAGGGGAAA+AGG | + | chr4.1:9446750-9446769 | MS.gene70314:intron | 35.0% |
| !!! | TAGTTTTGAGCTATCAAGGA+AGG | + | chr4.1:9442815-9442834 | MS.gene70314:CDS | 35.0% |
| !!! | TTTTTTTTTTGGTAGTGGCC+TGG | - | chr4.1:9445648-9445667 | None:intergenic | 35.0% |
| AAGATAAGGTGAGCAATGTG+AGG | + | chr4.1:9443633-9443652 | MS.gene70314:CDS | 40.0% | |
| ACATGGATTCCAGAAGTTCT+AGG | + | chr4.1:9444733-9444752 | MS.gene70314:intron | 40.0% | |
| ACCACGTAGAACGTGTTAAA+AGG | + | chr4.1:9445909-9445928 | MS.gene70314:intron | 40.0% | |
| ATACAGTTGCCAGGACTAAA+AGG | - | chr4.1:9444074-9444093 | None:intergenic | 40.0% | |
| ATGTGAGTGTGTCAAACTCT+AGG | + | chr4.1:9443105-9443124 | MS.gene70314:CDS | 40.0% | |
| CACGTAGAACGTGTTAAAAG+GGG | + | chr4.1:9445911-9445930 | MS.gene70314:intron | 40.0% | |
| CCAATTGAACTAAGCTCATG+AGG | - | chr4.1:9445584-9445603 | None:intergenic | 40.0% | |
| CCACGTAGAACGTGTTAAAA+GGG | + | chr4.1:9445910-9445929 | MS.gene70314:intron | 40.0% | |
| CCTCATGAGCTTAGTTCAAT+TGG | + | chr4.1:9445581-9445600 | MS.gene70314:intron | 40.0% | |
| CTCTCGTATGCTCTCATAAT+TGG | + | chr4.1:9444138-9444157 | MS.gene70314:intron | 40.0% | |
| CTGATGCTACTGCGATTAAT+GGG | - | chr4.1:9444046-9444065 | None:intergenic | 40.0% | |
| GAAGGTGATTGATTGTTTGC+AGG | + | chr4.1:9442833-9442852 | MS.gene70314:CDS | 40.0% | |
| GATTGGAAGGACAACTGATT+TGG | + | chr4.1:9444393-9444412 | MS.gene70314:intron | 40.0% | |
| GTGGTGTATTGGACAAGATA+AGG | + | chr4.1:9443069-9443088 | MS.gene70314:CDS | 40.0% | |
| GTTAGTAATTTGGAAAGGCG+TGG | - | chr4.1:9446172-9446191 | None:intergenic | 40.0% | |
| TAGGTGCTTAGCTAACTTCA+AGG | + | chr4.1:9445224-9445243 | MS.gene70314:intron | 40.0% | |
| TATTGGTGAGAGCTGTAACT+CGG | + | chr4.1:9442206-9442225 | MS.gene70314:CDS | 40.0% | |
| TCAATTTGGAGACGAGATTG+AGG | + | chr4.1:9444288-9444307 | MS.gene70314:intron | 40.0% | |
| TCATAGGATGGTTCGTGATT+CGG | + | chr4.1:9442461-9442480 | MS.gene70314:CDS | 40.0% | |
| TCCCACTCAACAAACTGAAA+TGG | - | chr4.1:9442516-9442535 | None:intergenic | 40.0% | |
| TCTGATGCTACTGCGATTAA+TGG | - | chr4.1:9444047-9444066 | None:intergenic | 40.0% | |
| TGTAACTCGGCATATTCTGA+TGG | + | chr4.1:9442219-9442238 | MS.gene70314:CDS | 40.0% | |
| TTGGATCATTTAGGCACACA+AGG | - | chr4.1:9444845-9444864 | None:intergenic | 40.0% | |
| TTTAACACGTTCTACGTGGT+GGG | - | chr4.1:9445909-9445928 | None:intergenic | 40.0% | |
| TTTCTCCCAAGAGCTTTCAT+GGG | - | chr4.1:9446221-9446240 | None:intergenic | 40.0% | |
| ! | AAGGAAGACAGACTTGCTTT+CGG | + | chr4.1:9443751-9443770 | MS.gene70314:CDS | 40.0% |
| ! | GAGAATCTTTGGCCACATTT+TGG | - | chr4.1:9446141-9446160 | None:intergenic | 40.0% |
| ! | GCAGTTTTCACCACCAAATT+TGG | + | chr4.1:9446270-9446289 | MS.gene70314:CDS | 40.0% |
| ! | GGATTCTCGTTTTACTTCTC+GGG | + | chr4.1:9443727-9443746 | MS.gene70314:CDS | 40.0% |
| ! | GGGATTCTCGTTTTACTTCT+CGG | + | chr4.1:9443726-9443745 | MS.gene70314:CDS | 40.0% |
| ! | TCAGAATCTCCTTTTAGTCC+TGG | + | chr4.1:9444062-9444081 | MS.gene70314:intron | 40.0% |
| ! | TTCACCCATATCTAGCCTTT+GGG | - | chr4.1:9444787-9444806 | None:intergenic | 40.0% |
| ! | TTTTAACACGTTCTACGTGG+TGG | - | chr4.1:9445910-9445929 | None:intergenic | 40.0% |
| ! | TTTTCTCCCAAGAGCTTTCA+TGG | - | chr4.1:9446222-9446241 | None:intergenic | 40.0% |
| !! | CAGTTTATTTCTGGAAGGAC+AGG | + | chr4.1:9442351-9442370 | MS.gene70314:CDS | 40.0% |
| !! | TGCAGACTTGTTACTTGATG+TGG | + | chr4.1:9444432-9444451 | MS.gene70314:intron | 40.0% |
| !!! | GTGGCTACTGATTTTCTGTT+TGG | + | chr4.1:9444451-9444470 | MS.gene70314:intron | 40.0% |
| AAAACAGCTGGCTGCAGTTA+AGG | + | chr4.1:9442650-9442669 | MS.gene70314:CDS | 45.0% | |
| AAACAGCTGGCTGCAGTTAA+GGG | + | chr4.1:9442651-9442670 | MS.gene70314:CDS | 45.0% | |
| AAGATTCGGGGTTCAAATCC+AGG | + | chr4.1:9445627-9445646 | MS.gene70314:intron | 45.0% | |
| ACTTCTTCCGCTTCTTCTCA+TGG | + | chr4.1:9442702-9442721 | MS.gene70314:CDS | 45.0% | |
| AGAACGTGTTAAAAGGGGAG+AGG | + | chr4.1:9445916-9445935 | MS.gene70314:intron | 45.0% | |
| AGGCTAGAAAGATATGCAGG+TGG | + | chr4.1:9443891-9443910 | MS.gene70314:CDS | 45.0% | |
| AGGGGAAAAGGAGAACATGA+AGG | + | chr4.1:9446762-9446781 | MS.gene70314:CDS | 45.0% | |
| ATGTGGATGTGTCCGGTAAA+TGG | + | chr4.1:9443189-9443208 | MS.gene70314:CDS | 45.0% | |
| CGTATGCTAAGGTATATGGC+TGG | - | chr4.1:9445966-9445985 | None:intergenic | 45.0% | |
| GAGAGGCTAGAAAGATATGC+AGG | + | chr4.1:9443888-9443907 | MS.gene70314:CDS | 45.0% | |
| GTAAAACGAGAATCCCTCAC+AGG | - | chr4.1:9443722-9443741 | None:intergenic | 45.0% | |
| TCCTCCCAAAGGCTAGATAT+GGG | + | chr4.1:9444780-9444799 | MS.gene70314:intron | 45.0% | |
| TGATGAAGGTGGCCAAAATG+TGG | + | chr4.1:9446126-9446145 | MS.gene70314:CDS | 45.0% | |
| TGTGGATGTGTCCGGTAAAT+GGG | + | chr4.1:9443190-9443209 | MS.gene70314:CDS | 45.0% | |
| TTCCTCCCAAAGGCTAGATA+TGG | + | chr4.1:9444779-9444798 | MS.gene70314:intron | 45.0% | |
| TTTCCCACTCTTCACTGGAT+GGG | - | chr4.1:9443304-9443323 | None:intergenic | 45.0% | |
| ! | ATATCCTTGCAAGGTTGGCT+AGG | + | chr4.1:9444006-9444025 | MS.gene70314:intron | 45.0% |
| ! | CCCTTTTAACACGTTCTACG+TGG | - | chr4.1:9445913-9445932 | None:intergenic | 45.0% |
| ! | CTCGTTTTACTTCTCGGGAA+AGG | + | chr4.1:9443732-9443751 | MS.gene70314:CDS | 45.0% |
| ! | CTTCACCCATATCTAGCCTT+TGG | - | chr4.1:9444788-9444807 | None:intergenic | 45.0% |
| ! | GCTAAGGTATATGGCTGGTT+TGG | - | chr4.1:9445961-9445980 | None:intergenic | 45.0% |
| ! | TAAGTGTTGTGCTCGTGTCT+TGG | + | chr4.1:9443013-9443032 | MS.gene70314:CDS | 45.0% |
| ! | TATCCTTGCAAGGTTGGCTA+GGG | + | chr4.1:9444007-9444026 | MS.gene70314:intron | 45.0% |
| ! | TTGAACATTAGGTGCTGTGC+TGG | + | chr4.1:9445192-9445211 | MS.gene70314:intron | 45.0% |
| !! | GGAAGGACAACTGATTTGGT+TGG | + | chr4.1:9444397-9444416 | MS.gene70314:intron | 45.0% |
| !! | TTGGAAAGGCGTGGTTTTTC+TGG | - | chr4.1:9446163-9446182 | None:intergenic | 45.0% |
| !!! | TTTTATCATTATATTAATAA+TGG | + | chr4.1:9444248-9444267 | MS.gene70314:intron | 5.0% |
| ATTGCCCATCCAGTGAAGAG+TGG | + | chr4.1:9443297-9443316 | MS.gene70314:CDS | 50.0% | |
| CAGGGGTTACATGCTGGAAT+TGG | - | chr4.1:9446102-9446121 | None:intergenic | 50.0% | |
| CGCAGTGCCTTTGAACACAT+GGG | + | chr4.1:9443251-9443270 | MS.gene70314:CDS | 50.0% | |
| CTTTCCCACTCTTCACTGGA+TGG | - | chr4.1:9443305-9443324 | None:intergenic | 50.0% | |
| GGGACTTCCATCTTGCATGT+CGG | - | chr4.1:9445889-9445908 | None:intergenic | 50.0% | |
| TCCAGTGAAGAGTGGGAAAG+AGG | + | chr4.1:9443305-9443324 | MS.gene70314:CDS | 50.0% | |
| TCCTCTTTCCCACTCTTCAC+TGG | - | chr4.1:9443309-9443328 | None:intergenic | 50.0% | |
| TCGCAGTGCCTTTGAACACA+TGG | + | chr4.1:9443250-9443269 | MS.gene70314:CDS | 50.0% | |
| TGCTCGTGTCTTGGACCTTA+TGG | + | chr4.1:9443022-9443041 | MS.gene70314:CDS | 50.0% | |
| TTGCCCATCCAGTGAAGAGT+GGG | + | chr4.1:9443298-9443317 | MS.gene70314:CDS | 50.0% | |
| ! | ACCCATATCTAGCCTTTGGG+AGG | - | chr4.1:9444784-9444803 | None:intergenic | 50.0% |
| !! | GCTGTGCTGGCTTAGTAGTT+AGG | + | chr4.1:9445205-9445224 | MS.gene70314:intron | 50.0% |
| CATCCCTAGCCAACCTTGCA+AGG | - | chr4.1:9444013-9444032 | None:intergenic | 55.0% | |
| GATGGCAGTGATAGCAGCGA+TGG | + | chr4.1:9443161-9443180 | MS.gene70314:CDS | 55.0% | |
| GGCTTGCATGTGGATGTGTC+CGG | + | chr4.1:9443182-9443201 | MS.gene70314:CDS | 55.0% | |
| GTAACCCCTGCTGCTGATGA+AGG | + | chr4.1:9446112-9446131 | MS.gene70314:CDS | 55.0% | |
| TGGATCGCCGACATGCAAGA+TGG | + | chr4.1:9445879-9445898 | MS.gene70314:intron | 55.0% | |
| ! | TAGCAGCGATGGCTTGCATG+TGG | + | chr4.1:9443172-9443191 | MS.gene70314:CDS | 55.0% |
| ACCCCTGCTGCTGATGAAGG+TGG | + | chr4.1:9446115-9446134 | MS.gene70314:CDS | 60.0% | |
| CAGCAGCAGGGGTTACATGC+TGG | - | chr4.1:9446108-9446127 | None:intergenic | 60.0% | |
| CAGCTGGCTGCAGTTAAGGG+TGG | + | chr4.1:9442654-9442673 | MS.gene70314:CDS | 60.0% | |
| GCCACCTTCATCAGCAGCAG+GGG | - | chr4.1:9446119-9446138 | None:intergenic | 60.0% | |
| GGCCACCTTCATCAGCAGCA+GGG | - | chr4.1:9446120-9446139 | None:intergenic | 60.0% | |
| TGGCCACCTTCATCAGCAGC+AGG | - | chr4.1:9446121-9446140 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9442198 | 9446944 | 9442198 | ID=MS.gene70314 |
| chr4.1 | mRNA | 9442198 | 9446944 | 9442198 | ID=MS.gene70314.t1;Parent=MS.gene70314 |
| chr4.1 | exon | 9442198 | 9443781 | 9442198 | ID=MS.gene70314.t1.exon1;Parent=MS.gene70314.t1 |
| chr4.1 | CDS | 9442198 | 9443781 | 9442198 | ID=cds.MS.gene70314.t1;Parent=MS.gene70314.t1 |
| chr4.1 | exon | 9443873 | 9444018 | 9443873 | ID=MS.gene70314.t1.exon2;Parent=MS.gene70314.t1 |
| chr4.1 | CDS | 9443873 | 9444018 | 9443873 | ID=cds.MS.gene70314.t1;Parent=MS.gene70314.t1 |
| chr4.1 | exon | 9446084 | 9446293 | 9446084 | ID=MS.gene70314.t1.exon3;Parent=MS.gene70314.t1 |
| chr4.1 | CDS | 9446084 | 9446293 | 9446084 | ID=cds.MS.gene70314.t1;Parent=MS.gene70314.t1 |
| chr4.1 | exon | 9446758 | 9446944 | 9446758 | ID=MS.gene70314.t1.exon4;Parent=MS.gene70314.t1 |
| chr4.1 | CDS | 9446758 | 9446944 | 9446758 | ID=cds.MS.gene70314.t1;Parent=MS.gene70314.t1 |
| Gene Sequence |
| Protein sequence |
