Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73268.t1 | XP_013454902.1 | 88.5 | 348 | 10 | 1 | 1 | 318 | 115 | 462 | 1.20E-173 | 619 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73268.t1 | Q9M394 | 73.8 | 347 | 62 | 1 | 1 | 318 | 125 | 471 | 3.3e-151 | 535.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73268.t1 | A0A072USU3 | 88.5 | 348 | 10 | 1 | 1 | 318 | 115 | 462 | 8.8e-174 | 619.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene73268 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene049297 | MS.gene73268 | 0.865541 | 5.48E-65 | -1.69E-46 |
| MS.gene049378 | MS.gene73268 | 0.807888 | 4.06E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene73268 | 0.864385 | 1.26E-64 | -1.69E-46 |
| MS.gene049910 | MS.gene73268 | 0.809995 | 1.44E-50 | -1.69E-46 |
| MS.gene050099 | MS.gene73268 | 0.822628 | 2.14E-53 | -1.69E-46 |
| MS.gene050226 | MS.gene73268 | 0.83316 | 6.26E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene73268 | 0.836422 | 9.45E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene73268 | 0.831594 | 1.53E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene73268 | 0.816766 | 4.67E-52 | -1.69E-46 |
| MS.gene050330 | MS.gene73268 | -0.811889 | 5.58E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene73268 | 0.801747 | 7.78E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene73268 | 0.818548 | 1.85E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene73268 | 0.816631 | 5.01E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene73268 | 0.816242 | 6.12E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene73268 | -0.875906 | 2.13E-68 | -1.69E-46 |
| MS.gene050642 | MS.gene73268 | 0.902967 | 5.64E-79 | -1.69E-46 |
| MS.gene051240 | MS.gene73268 | 0.819911 | 9.05E-53 | -1.69E-46 |
| MS.gene051257 | MS.gene73268 | 0.814579 | 1.43E-51 | -1.69E-46 |
| MS.gene051662 | MS.gene73268 | 0.866096 | 3.66E-65 | -1.69E-46 |
| MS.gene051663 | MS.gene73268 | 0.850186 | 2.00E-60 | -1.69E-46 |
| MS.gene051860 | MS.gene73268 | 0.854443 | 1.23E-61 | -1.69E-46 |
| MS.gene051983 | MS.gene73268 | 0.880591 | 4.84E-70 | -1.69E-46 |
| MS.gene052077 | MS.gene73268 | 0.812481 | 4.15E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene73268 | 0.812996 | 3.20E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene73268 | 0.836071 | 1.16E-56 | -1.69E-46 |
| MS.gene052309 | MS.gene73268 | -0.840832 | 6.86E-58 | -1.69E-46 |
| MS.gene052600 | MS.gene73268 | 0.866329 | 3.09E-65 | -1.69E-46 |
| MS.gene053557 | MS.gene73268 | 0.81721 | 3.71E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene73268 | 0.887264 | 1.66E-72 | -1.69E-46 |
| MS.gene053907 | MS.gene73268 | 0.854027 | 1.62E-61 | -1.69E-46 |
| MS.gene053971 | MS.gene73268 | 0.824097 | 9.71E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene73268 | 0.876862 | 9.96E-69 | -1.69E-46 |
| MS.gene054983 | MS.gene73268 | 0.834416 | 3.04E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene73268 | 0.815796 | 7.69E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene73268 | 0.845215 | 4.67E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene73268 | 0.836258 | 1.04E-56 | -1.69E-46 |
| MS.gene055604 | MS.gene73268 | 0.812944 | 3.29E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene73268 | 0.807216 | 5.63E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene73268 | 0.830584 | 2.70E-55 | -1.69E-46 |
| MS.gene056772 | MS.gene73268 | 0.806725 | 7.16E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene73268 | -0.807924 | 3.98E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene73268 | 0.875963 | 2.04E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene73268 | 0.85665 | 2.79E-62 | -1.69E-46 |
| MS.gene057245 | MS.gene73268 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene057260 | MS.gene73268 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene73268 | 0.846574 | 1.99E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene73268 | 0.845626 | 3.61E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene73268 | 0.85807 | 1.06E-62 | -1.69E-46 |
| MS.gene058142 | MS.gene73268 | 0.844341 | 8.03E-59 | -1.69E-46 |
| MS.gene058276 | MS.gene73268 | 0.81949 | 1.13E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene73268 | 0.828705 | 7.75E-55 | -1.69E-46 |
| MS.gene058833 | MS.gene73268 | 0.818578 | 1.82E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene73268 | 0.819587 | 1.07E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene73268 | 0.845052 | 5.16E-59 | -1.69E-46 |
| MS.gene059518 | MS.gene73268 | 0.824075 | 9.82E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene73268 | 0.870112 | 1.87E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene73268 | 0.84605 | 2.77E-59 | -1.69E-46 |
| MS.gene059899 | MS.gene73268 | 0.817086 | 3.96E-52 | -1.69E-46 |
| MS.gene060476 | MS.gene73268 | 0.817391 | 3.38E-52 | -1.69E-46 |
| MS.gene060994 | MS.gene73268 | 0.826202 | 3.09E-54 | -1.69E-46 |
| MS.gene061000 | MS.gene73268 | 0.824844 | 6.48E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene73268 | 0.834964 | 2.21E-56 | -1.69E-46 |
| MS.gene061112 | MS.gene73268 | 0.802541 | 5.34E-49 | -1.69E-46 |
| MS.gene061113 | MS.gene73268 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene73268 | -0.808162 | 3.55E-50 | -1.69E-46 |
| MS.gene061265 | MS.gene73268 | 0.804496 | 2.10E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73268.t1 | MTR_4g019165 | 88.506 | 348 | 10 | 1 | 1 | 318 | 115 | 462 | 0.0 | 633 |
| MS.gene73268.t1 | MTR_5g044990 | 41.691 | 343 | 156 | 3 | 1 | 313 | 232 | 560 | 7.80e-92 | 285 |
| MS.gene73268.t1 | MTR_2g098950 | 33.851 | 322 | 150 | 5 | 17 | 308 | 38 | 326 | 3.75e-47 | 162 |
| MS.gene73268.t1 | MTR_1g076850 | 32.288 | 319 | 155 | 4 | 19 | 308 | 34 | 320 | 1.67e-45 | 157 |
| MS.gene73268.t1 | MTR_4g067310 | 33.746 | 323 | 149 | 7 | 17 | 308 | 39 | 327 | 2.79e-44 | 154 |
| MS.gene73268.t1 | MTR_5g079460 | 32.812 | 320 | 155 | 4 | 17 | 307 | 91 | 379 | 9.41e-42 | 149 |
| MS.gene73268.t1 | MTR_6g089480 | 32.012 | 328 | 163 | 7 | 17 | 314 | 18 | 315 | 1.81e-41 | 146 |
| MS.gene73268.t1 | MTR_1g101950 | 31.761 | 318 | 158 | 6 | 17 | 305 | 47 | 334 | 9.00e-40 | 142 |
| MS.gene73268.t1 | MTR_6g089480 | 31.944 | 288 | 137 | 6 | 17 | 275 | 18 | 275 | 9.86e-37 | 133 |
| MS.gene73268.t1 | MTR_6g089480 | 32.509 | 283 | 132 | 6 | 17 | 270 | 18 | 270 | 7.19e-36 | 130 |
| MS.gene73268.t1 | MTR_7g075860 | 30.094 | 319 | 160 | 6 | 19 | 305 | 67 | 354 | 4.82e-34 | 128 |
| MS.gene73268.t1 | MTR_1g057810 | 27.742 | 310 | 166 | 5 | 21 | 302 | 276 | 555 | 1.00e-27 | 113 |
| MS.gene73268.t1 | MTR_1g105150 | 29.293 | 297 | 164 | 7 | 21 | 302 | 276 | 541 | 9.00e-25 | 104 |
| MS.gene73268.t1 | MTR_1g069490 | 27.273 | 297 | 157 | 5 | 38 | 305 | 129 | 395 | 2.55e-23 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73268.t1 | AT3G54090 | 73.775 | 347 | 62 | 1 | 1 | 318 | 125 | 471 | 0.0 | 552 |
| MS.gene73268.t1 | AT1G69200 | 40.549 | 328 | 156 | 3 | 1 | 300 | 228 | 544 | 7.58e-83 | 262 |
| MS.gene73268.t1 | AT3G59480 | 34.154 | 325 | 145 | 6 | 17 | 308 | 34 | 322 | 1.39e-47 | 163 |
| MS.gene73268.t1 | AT2G31390 | 30.973 | 339 | 167 | 4 | 5 | 311 | 21 | 324 | 2.71e-46 | 159 |
| MS.gene73268.t1 | AT1G06020 | 33.231 | 325 | 155 | 5 | 17 | 311 | 34 | 326 | 6.03e-46 | 159 |
| MS.gene73268.t1 | AT1G06030 | 34.259 | 324 | 151 | 6 | 19 | 312 | 37 | 328 | 1.09e-45 | 158 |
| MS.gene73268.t1 | AT4G10260 | 32.602 | 319 | 154 | 4 | 19 | 308 | 32 | 318 | 3.08e-43 | 151 |
| MS.gene73268.t1 | AT1G66430 | 32.812 | 320 | 153 | 5 | 17 | 306 | 89 | 376 | 6.54e-43 | 152 |
| MS.gene73268.t1 | AT5G51830 | 32.399 | 321 | 158 | 7 | 17 | 308 | 47 | 337 | 6.97e-40 | 143 |
| MS.gene73268.t1 | AT5G51830 | 32.399 | 321 | 158 | 7 | 17 | 308 | 47 | 337 | 6.97e-40 | 143 |
Find 89 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGTCTTCAAACATTTC+TGG | 0.137316 | 4.1:+79085112 | None:intergenic |
| TTCCATTCTGTGTATATATC+TGG | 0.195178 | 4.1:+79087901 | None:intergenic |
| GGCGGACGGGCGGCTTTGTT+AGG | 0.222353 | 4.1:-79087796 | MS.gene73268:CDS |
| AAAGTTGGGGAGGATGAGTT+TGG | 0.234805 | 4.1:-79087772 | MS.gene73268:CDS |
| GTAATACTCTTGACGATTCT+TGG | 0.268512 | 4.1:+79085348 | None:intergenic |
| GTTTGAAGACCAAGATGTTT+TGG | 0.272200 | 4.1:-79085104 | MS.gene73268:CDS |
| CACAAGGCCGCCAAACTTCT+TGG | 0.273975 | 4.1:+79085564 | None:intergenic |
| AACAGAGTTGATTCCATAGA+AGG | 0.303709 | 4.1:+79085604 | None:intergenic |
| CCGGAGTTCGCGCGAGCGCC+TGG | 0.325250 | 4.1:-79087859 | MS.gene73268:CDS |
| AGTTCTAACATCCCCTTCTA+TGG | 0.340037 | 4.1:-79085617 | MS.gene73268:CDS |
| CGGCTTTGTTAGGGAAAGTT+GGG | 0.344868 | 4.1:-79087786 | MS.gene73268:CDS |
| AAGTTGGGGAGGATGAGTTT+GGG | 0.346703 | 4.1:-79087771 | MS.gene73268:CDS |
| TGGACTATTGGTGGAGTTAG+AGG | 0.347631 | 4.1:-79085037 | MS.gene73268:CDS |
| CTTGGTTTGTTCGTAATCTT+CGG | 0.358233 | 4.1:+79085366 | None:intergenic |
| TTAGAACTTCTGAATTGAAA+TGG | 0.361898 | 4.1:+79085632 | None:intergenic |
| TTGTTCCATCGGTCACAAAA+AGG | 0.367248 | 4.1:+79085275 | None:intergenic |
| CCAGTTCTATCGCAAGTATA+AGG | 0.379857 | 4.1:+79085184 | None:intergenic |
| CCATGTCAGGCTTGGCGGAC+GGG | 0.385073 | 4.1:-79087809 | MS.gene73268:CDS |
| GTTTGGGGAAGAGATGGTTT+TGG | 0.391753 | 4.1:-79087755 | MS.gene73268:CDS |
| ATTATATCGCAATGGACTAT+TGG | 0.392117 | 4.1:-79085049 | MS.gene73268:CDS |
| CCGAGGAAATCTCGCCTTTG+TGG | 0.396249 | 4.1:-79085315 | MS.gene73268:CDS |
| GCGGCTTTGTTAGGGAAAGT+TGG | 0.409684 | 4.1:-79087787 | MS.gene73268:CDS |
| CAGATTCTGAGTAGCACTTT+CGG | 0.411608 | 4.1:+79085006 | None:intergenic |
| GCGGACGGGCGGCTTTGTTA+GGG | 0.419560 | 4.1:-79087795 | MS.gene73268:CDS |
| ATAAAGTGGTCCAAGAAGTT+TGG | 0.422946 | 4.1:-79085574 | MS.gene73268:CDS |
| AGTCCATTGCGATATAATTC+CGG | 0.424032 | 4.1:+79085054 | None:intergenic |
| ATGTGGCGGTGGCCCATGTC+AGG | 0.426234 | 4.1:-79087822 | MS.gene73268:CDS |
| CCCGTCCGCCAAGCCTGACA+TGG | 0.441638 | 4.1:+79087809 | None:intergenic |
| GGATGAGTTTGGGGAAGAGA+TGG | 0.452724 | 4.1:-79087761 | MS.gene73268:CDS |
| CCAGGCGCTCGCGCGAACTC+CGG | 0.455203 | 4.1:+79087859 | None:intergenic |
| GAGTTCGCGCGAGCGCCTGG+TGG | 0.459236 | 4.1:-79087856 | MS.gene73268:CDS |
| CGTGATCTCCACAGAGGTAA+TGG | 0.461462 | 4.1:+79085523 | None:intergenic |
| TGTGTATATATCTGGGTCCA+TGG | 0.465474 | 4.1:+79087909 | None:intergenic |
| TCCATTCTGTGTATATATCT+GGG | 0.467221 | 4.1:+79087902 | None:intergenic |
| CCCATGTCAGGCTTGGCGGA+CGG | 0.474766 | 4.1:-79087810 | MS.gene73268:CDS |
| CCTTATACTTGCGATAGAAC+TGG | 0.478733 | 4.1:-79085184 | MS.gene73268:CDS |
| TGGCTCTGGTGATGCTATTG+TGG | 0.484324 | 4.1:-79085164 | MS.gene73268:CDS |
| ACCACAACCCCGTCAAAAGA+AGG | 0.492807 | 4.1:+79085232 | None:intergenic |
| GGCTTTGTTAGGGAAAGTTG+GGG | 0.494032 | 4.1:-79087785 | MS.gene73268:CDS |
| GCGGTGGCCCATGTCAGGCT+TGG | 0.495812 | 4.1:-79087817 | MS.gene73268:CDS |
| ATCTCGCCTTTGTGGCATGA+TGG | 0.501857 | 4.1:-79085307 | MS.gene73268:CDS |
| ACATTCGACGGTGGCCCACC+AGG | 0.509333 | 4.1:+79087841 | None:intergenic |
| CTACGTTTCGCTATTGCAGC+CGG | 0.509386 | 4.1:-79085073 | MS.gene73268:CDS |
| GCCACCGTCGAATGTGGCGG+TGG | 0.514160 | 4.1:-79087833 | MS.gene73268:CDS |
| AGGAGAAGGTGCAGACTAGA+GGG | 0.514816 | 4.1:-79087723 | MS.gene73268:CDS |
| AGATTTCCTCGGCAGTGTAA+TGG | 0.518791 | 4.1:+79085326 | None:intergenic |
| AATGTGCTGAGGATTCTCTT+AGG | 0.525056 | 4.1:-79087609 | MS.gene73268:CDS |
| TGAAGTTTCAAGAACCGAGC+TGG | 0.526021 | 4.1:-79085449 | MS.gene73268:CDS |
| GTGGCCCATGTCAGGCTTGG+CGG | 0.526291 | 4.1:-79087814 | MS.gene73268:CDS |
| AGTTCGCGCGAGCGCCTGGT+GGG | 0.526345 | 4.1:-79087855 | MS.gene73268:CDS |
| CTCTGTTCAAAGCAATAAAG+TGG | 0.530790 | 4.1:-79085588 | MS.gene73268:CDS |
| TAATCTTCGGCATAGTATTG+TGG | 0.532869 | 4.1:+79085379 | None:intergenic |
| GTGAATTCTAATTGTTCCAT+CGG | 0.536542 | 4.1:+79085264 | None:intergenic |
| GGCGCTCGCGCGAACTCCGG+CGG | 0.536698 | 4.1:+79087862 | None:intergenic |
| GCTGTCTCTCCAAAACATCT+TGG | 0.538601 | 4.1:+79085095 | None:intergenic |
| TTCAAACATTTCTGGACAAG+TGG | 0.540890 | 4.1:+79085120 | None:intergenic |
| AGTTGGGGAGGATGAGTTTG+GGG | 0.545331 | 4.1:-79087770 | MS.gene73268:CDS |
| TGGTGGGCCACCGTCGAATG+TGG | 0.551646 | 4.1:-79087839 | MS.gene73268:CDS |
| CCACAACCCCGTCAAAAGAA+GGG | 0.552175 | 4.1:+79085233 | None:intergenic |
| TGGGCCACCGCCACATTCGA+CGG | 0.552755 | 4.1:+79087829 | None:intergenic |
| ACCCAGATATATACACAGAA+TGG | 0.556834 | 4.1:-79087903 | MS.gene73268:CDS |
| ACAGAGTTGATTCCATAGAA+GGG | 0.559311 | 4.1:+79085605 | None:intergenic |
| ATATCGCAATGGACTATTGG+TGG | 0.560224 | 4.1:-79085046 | MS.gene73268:CDS |
| AAGTGGTCCAAGAAGTTTGG+CGG | 0.570685 | 4.1:-79085571 | MS.gene73268:CDS |
| GTGTATATATCTGGGTCCAT+GGG | 0.573279 | 4.1:+79087910 | None:intergenic |
| ACTTGCGATAGAACTGGCTC+TGG | 0.580431 | 4.1:-79085178 | MS.gene73268:CDS |
| CCGTCCGCCAAGCCTGACAT+GGG | 0.580898 | 4.1:+79087810 | None:intergenic |
| AAGGAGAAGGTGCAGACTAG+AGG | 0.583488 | 4.1:-79087724 | MS.gene73268:CDS |
| CCACAAAGGCGAGATTTCCT+CGG | 0.586298 | 4.1:+79085315 | None:intergenic |
| TGTCAGGCTTGGCGGACGGG+CGG | 0.592628 | 4.1:-79087806 | MS.gene73268:CDS |
| TTTGGGGATGAATAAGGAGA+AGG | 0.593535 | 4.1:-79087737 | MS.gene73268:CDS |
| GTCTAGAAGAAATTCCAGCT+CGG | 0.610384 | 4.1:+79085435 | None:intergenic |
| CAGAGTTGATTCCATAGAAG+GGG | 0.614146 | 4.1:+79085606 | None:intergenic |
| GATGTTACAATGGAAGCCGC+CGG | 0.615125 | 4.1:-79087878 | MS.gene73268:CDS |
| CACAACCCCGTCAAAAGAAG+GGG | 0.616084 | 4.1:+79085234 | None:intergenic |
| TGGGCCACCGTCGAATGTGG+CGG | 0.619013 | 4.1:-79087836 | MS.gene73268:CDS |
| CAGCCGGAATTATATCGCAA+TGG | 0.626399 | 4.1:-79085057 | MS.gene73268:CDS |
| TTTGTTAGGGAAAGTTGGGG+AGG | 0.641245 | 4.1:-79087782 | MS.gene73268:CDS |
| CAGAATGGAAGATGTTACAA+TGG | 0.641345 | 4.1:-79087888 | MS.gene73268:CDS |
| TTCTGAGTAGCACTTTCGGT+AGG | 0.642730 | 4.1:+79085010 | None:intergenic |
| GTATTACCATTACACTGCCG+AGG | 0.655331 | 4.1:-79085332 | MS.gene73268:CDS |
| GCCACCGCCACATTCGACGG+TGG | 0.668024 | 4.1:+79087832 | None:intergenic |
| GGAGAAGGTGCAGACTAGAG+GGG | 0.677795 | 4.1:-79087722 | MS.gene73268:intron |
| TTAAGTCCATCATGCCACAA+AGG | 0.677817 | 4.1:+79085301 | None:intergenic |
| GATTGTTAAGGAATGTGCTG+AGG | 0.682184 | 4.1:-79087620 | MS.gene73268:intron |
| TAAACTTGCCATTACCTCTG+TGG | 0.687258 | 4.1:-79085531 | MS.gene73268:CDS |
| AAGTTTATGTACCTTCAATG+TGG | 0.696809 | 4.1:-79084976 | MS.gene73268:CDS |
| TAGACGAAGAACATTACGAG+AGG | 0.701140 | 4.1:-79085417 | MS.gene73268:CDS |
| TCATCGCGTGATCTCCACAG+AGG | 0.761083 | 4.1:+79085517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAGTTTTTTTTTCTTTA+CGG | - | chr4.1:79087130-79087149 | MS.gene73268:intron | 10.0% |
| !! | ATAAGCTTATATATCATATA+AGG | + | chr4.1:79085991-79086010 | None:intergenic | 15.0% |
| !! | TTATTATTCATAATGAGATT+CGG | - | chr4.1:79086076-79086095 | MS.gene73268:intron | 15.0% |
| !! | AAAAATAAACAACCTATAAG+TGG | + | chr4.1:79085378-79085397 | None:intergenic | 20.0% |
| !! | CATAAAATGTGTTTATAAGT+GGG | - | chr4.1:79085655-79085674 | MS.gene73268:intron | 20.0% |
| !! | CTTATACCATCATAAAATTT+AGG | + | chr4.1:79085520-79085539 | None:intergenic | 20.0% |
| !! | GAGAAATAATTAAAAAAGCA+TGG | - | chr4.1:79087391-79087410 | MS.gene73268:intron | 20.0% |
| !! | TCATAAAATGTGTTTATAAG+TGG | - | chr4.1:79085654-79085673 | MS.gene73268:intron | 20.0% |
| !!! | AGTGTCAATAAAATCAATTT+TGG | + | chr4.1:79087042-79087061 | None:intergenic | 20.0% |
| !!! | GTGTCAATAAAATCAATTTT+GGG | + | chr4.1:79087041-79087060 | None:intergenic | 20.0% |
| !!! | TAATCAAAACTTTTTCTGTT+AGG | - | chr4.1:79086441-79086460 | MS.gene73268:intron | 20.0% |
| !!! | TGAAAAAATAGCTTTAACAT+TGG | + | chr4.1:79086703-79086722 | None:intergenic | 20.0% |
| !!! | TGTCATTTGATTTACTTTTT+AGG | - | chr4.1:79085964-79085983 | MS.gene73268:intron | 20.0% |
| !!! | TTAGGCTTTACAATATTTTA+CGG | - | chr4.1:79085718-79085737 | MS.gene73268:intron | 20.0% |
| !!! | TTTCAATGTTTTTACTTTGA+AGG | - | chr4.1:79086641-79086660 | MS.gene73268:intron | 20.0% |
| ! | TACCATCATAAAATTTAGGT+TGG | + | chr4.1:79085516-79085535 | None:intergenic | 25.0% |
| ! | TATACTGACATTGGTAAAAA+TGG | - | chr4.1:79086471-79086490 | MS.gene73268:intron | 25.0% |
| ! | TCAGTTAAAATTGTGTTTGA+AGG | - | chr4.1:79086609-79086628 | MS.gene73268:intron | 25.0% |
| ! | TTAGAACTTCTGAATTGAAA+TGG | + | chr4.1:79087251-79087270 | None:intergenic | 25.0% |
| !! | AATAATTAAAAAAGCATGGC+AGG | - | chr4.1:79087395-79087414 | MS.gene73268:intron | 25.0% |
| !! | TGATATTTTATGACGTCAAA+TGG | - | chr4.1:79086874-79086893 | MS.gene73268:intron | 25.0% |
| !! | TTACAATATTTTACGGTATG+CGG | - | chr4.1:79085725-79085744 | MS.gene73268:intron | 25.0% |
| !!! | AAAATAGCTTTAACATTGGA+TGG | + | chr4.1:79086699-79086718 | None:intergenic | 25.0% |
| !!! | CAATAAAATCAATTTTGGGA+TGG | + | chr4.1:79087037-79087056 | None:intergenic | 25.0% |
| !!! | GTGAAAGTTTGTTAATGTAA+GGG | - | chr4.1:79086493-79086512 | MS.gene73268:intron | 25.0% |
| !!! | TACTAGTTTGTTAATGTATG+AGG | - | chr4.1:79087153-79087172 | MS.gene73268:intron | 25.0% |
| !!! | TAGTGTATCTATTTTTGACA+CGG | - | chr4.1:79085798-79085817 | MS.gene73268:intron | 25.0% |
| !!! | TTGTTATTTTTGCCACTTAT+AGG | - | chr4.1:79085363-79085382 | MS.gene73268:CDS | 25.0% |
| AAAATGTGTTTATAAGTGGG+AGG | - | chr4.1:79085658-79085677 | MS.gene73268:intron | 30.0% | |
| AAAGATCATGTATTCACTTG+AGG | - | chr4.1:79086793-79086812 | MS.gene73268:intron | 30.0% | |
| AAGTTTATGTACCTTCAATG+TGG | - | chr4.1:79087904-79087923 | MS.gene73268:CDS | 30.0% | |
| AGCAGTTCATTAGAATGAAA+CGG | + | chr4.1:79085879-79085898 | None:intergenic | 30.0% | |
| CAGTTAAAGTCAAGTTTGAA+GGG | - | chr4.1:79086273-79086292 | MS.gene73268:intron | 30.0% | |
| CGGTTAATGAATTGGAAAAT+TGG | - | chr4.1:79086096-79086115 | MS.gene73268:intron | 30.0% | |
| CTTTGCAGAATACTAATGTT+TGG | + | chr4.1:79086777-79086796 | None:intergenic | 30.0% | |
| GAAGCAAATTTATGTGTGAA+AGG | - | chr4.1:79086418-79086437 | MS.gene73268:intron | 30.0% | |
| GATTCTGATACATTACATTG+TGG | - | chr4.1:79086823-79086842 | MS.gene73268:intron | 30.0% | |
| GTGAATTCTAATTGTTCCAT+CGG | + | chr4.1:79087619-79087638 | None:intergenic | 30.0% | |
| TCAAACATTCTCCTTAACAA+AGG | + | chr4.1:79086532-79086551 | None:intergenic | 30.0% | |
| TCAGTTAAAGTCAAGTTTGA+AGG | - | chr4.1:79086272-79086291 | MS.gene73268:intron | 30.0% | |
| TCCATTCTGTGTATATATCT+GGG | + | chr4.1:79084981-79085000 | None:intergenic | 30.0% | |
| TTCCATTCTGTGTATATATC+TGG | + | chr4.1:79084982-79085001 | None:intergenic | 30.0% | |
| TTGTTAATGTAAGGGTAAGA+TGG | - | chr4.1:79086501-79086520 | MS.gene73268:intron | 30.0% | |
| ! | ATATGGTTTGCAAGATAAGT+TGG | - | chr4.1:79086918-79086937 | MS.gene73268:intron | 30.0% |
| ! | ATGAGATTCGGTTAATGAAT+TGG | - | chr4.1:79086088-79086107 | MS.gene73268:intron | 30.0% |
| ! | GTCCAACCTAAATTTTATGA+TGG | - | chr4.1:79085511-79085530 | MS.gene73268:CDS | 30.0% |
| ! | TATTATACCCCTTCTTTTGA+CGG | - | chr4.1:79087639-79087658 | MS.gene73268:intron | 30.0% |
| !! | ATTATATCGCAATGGACTAT+TGG | - | chr4.1:79087831-79087850 | MS.gene73268:CDS | 30.0% |
| !! | GGTGAAAGTTTGTTAATGTA+AGG | - | chr4.1:79086492-79086511 | MS.gene73268:intron | 30.0% |
| !!! | GAATCTTTCTGTTTTGAAAG+AGG | - | chr4.1:79085305-79085324 | MS.gene73268:CDS | 30.0% |
| !!! | GTCGTAAAATTGGTTTTGTA+GGG | - | chr4.1:79085479-79085498 | MS.gene73268:CDS | 30.0% |
| !!! | TATTGACACTTTTGAAACCA+AGG | - | chr4.1:79087052-79087071 | MS.gene73268:intron | 30.0% |
| AAGTCACACATGTAGAGTTT+GGG | - | chr4.1:79086976-79086995 | MS.gene73268:intron | 35.0% | |
| ACCCAGATATATACACAGAA+TGG | - | chr4.1:79084977-79084996 | MS.gene73268:CDS | 35.0% | |
| AGATGGTCTTTCCTTTGTTA+AGG | - | chr4.1:79086518-79086537 | MS.gene73268:intron | 35.0% | |
| AGTCCATTGCGATATAATTC+CGG | + | chr4.1:79087829-79087848 | None:intergenic | 35.0% | |
| AGTTTACGTCGAAAAACACA+AGG | + | chr4.1:79087335-79087354 | None:intergenic | 35.0% | |
| ATAAAGTGGTCCAAGAAGTT+TGG | - | chr4.1:79087306-79087325 | MS.gene73268:intron | 35.0% | |
| CAACACTTCTAGTCAAATTG+AGG | - | chr4.1:79086384-79086403 | MS.gene73268:intron | 35.0% | |
| CAGAATGGAAGATGTTACAA+TGG | - | chr4.1:79084992-79085011 | MS.gene73268:CDS | 35.0% | |
| CATCACTTCAAGTCAATTTG+AGG | - | chr4.1:79086721-79086740 | MS.gene73268:intron | 35.0% | |
| CTCTGTTCAAAGCAATAAAG+TGG | - | chr4.1:79087292-79087311 | MS.gene73268:intron | 35.0% | |
| GCAGTTCATTAGAATGAAAC+GGG | + | chr4.1:79085878-79085897 | None:intergenic | 35.0% | |
| GTAATACTCTTGACGATTCT+TGG | + | chr4.1:79087535-79087554 | None:intergenic | 35.0% | |
| TAAGTCACACATGTAGAGTT+TGG | - | chr4.1:79086975-79086994 | MS.gene73268:intron | 35.0% | |
| TAATCTTCGGCATAGTATTG+TGG | + | chr4.1:79087504-79087523 | None:intergenic | 35.0% | |
| TCAAACATTCTCCCTAACAA+AGG | + | chr4.1:79086211-79086230 | None:intergenic | 35.0% | |
| TGTGATTCACAATTCGTATC+TGG | - | chr4.1:79086122-79086141 | MS.gene73268:intron | 35.0% | |
| TTAGTTGAGCTATCAGCTAT+TGG | - | chr4.1:79085553-79085572 | MS.gene73268:CDS | 35.0% | |
| TTGTTGATGTATGAGGAAGA+TGG | - | chr4.1:79086180-79086199 | MS.gene73268:intron | 35.0% | |
| ! | AACAGAGTTGATTCCATAGA+AGG | + | chr4.1:79087279-79087298 | None:intergenic | 35.0% |
| ! | ACAAAACCAATTTTACGACG+AGG | + | chr4.1:79085478-79085497 | None:intergenic | 35.0% |
| ! | ACAGAGTTGATTCCATAGAA+GGG | + | chr4.1:79087278-79087297 | None:intergenic | 35.0% |
| ! | ATTATACCCCTTCTTTTGAC+GGG | - | chr4.1:79087640-79087659 | MS.gene73268:intron | 35.0% |
| ! | CAAAACCAATTTTACGACGA+GGG | + | chr4.1:79085477-79085496 | None:intergenic | 35.0% |
| ! | GACGTCAAATGGTTTTTGTA+TGG | - | chr4.1:79086885-79086904 | MS.gene73268:intron | 35.0% |
| ! | GAGGAATTTTTGTGTGTGAA+AGG | - | chr4.1:79086748-79086767 | MS.gene73268:intron | 35.0% |
| ! | GTTTGAAGACCAAGATGTTT+TGG | - | chr4.1:79087776-79087795 | MS.gene73268:CDS | 35.0% |
| ! | TCATGCTTTGTTGATGTATG+AGG | - | chr4.1:79086173-79086192 | MS.gene73268:intron | 35.0% |
| ! | TCTTGGTCTTCAAACATTTC+TGG | + | chr4.1:79087771-79087790 | None:intergenic | 35.0% |
| ! | TGTATGGATTGTGACTGATA+TGG | - | chr4.1:79086901-79086920 | MS.gene73268:intron | 35.0% |
| ! | TTCAAACATTTCTGGACAAG+TGG | + | chr4.1:79087763-79087782 | None:intergenic | 35.0% |
| !! | AAGGTGAAGTTTGATGATGA+TGG | - | chr4.1:79085222-79085241 | MS.gene73268:CDS | 35.0% |
| !! | AGGTGAAGTTTGATGATGAT+GGG | - | chr4.1:79085223-79085242 | MS.gene73268:CDS | 35.0% |
| !! | CTTGGTTTGTTCGTAATCTT+CGG | + | chr4.1:79087517-79087536 | None:intergenic | 35.0% |
| !! | TTTGATGATGATGGGAAGAT+GGG | - | chr4.1:79085231-79085250 | MS.gene73268:CDS | 35.0% |
| !!! | CATTTTGGGGTCAAAATAGT+TGG | - | chr4.1:79087081-79087100 | MS.gene73268:intron | 35.0% |
| !!! | CGTCGTAAAATTGGTTTTGT+AGG | - | chr4.1:79085478-79085497 | MS.gene73268:CDS | 35.0% |
| !!! | TGGTTTTGTAGGGTTAAGTT+AGG | - | chr4.1:79085489-79085508 | MS.gene73268:CDS | 35.0% |
| !!! | TTTTTTATGTGTACCACTGC+AGG | - | chr4.1:79087215-79087234 | MS.gene73268:intron | 35.0% |
| AACCCTATCACAACCAAGAA+AGG | + | chr4.1:79085603-79085622 | None:intergenic | 40.0% | |
| AATGTGCTGAGGATTCTCTT+AGG | - | chr4.1:79085271-79085290 | MS.gene73268:CDS | 40.0% | |
| ACTGCTACTCAAACTTAGTG+TGG | - | chr4.1:79085893-79085912 | MS.gene73268:intron | 40.0% | |
| ATTCTGAACACAGTCGATAC+AGG | - | chr4.1:79085769-79085788 | MS.gene73268:intron | 40.0% | |
| CAGATTCTGAGTAGCACTTT+CGG | + | chr4.1:79087877-79087896 | None:intergenic | 40.0% | |
| CCAGTTCTATCGCAAGTATA+AGG | + | chr4.1:79087699-79087718 | None:intergenic | 40.0% | |
| CCTTATACTTGCGATAGAAC+TGG | - | chr4.1:79087696-79087715 | MS.gene73268:intron | 40.0% | |
| CTACCAACTCTGCTTGTAAA+GGG | + | chr4.1:79085691-79085710 | None:intergenic | 40.0% | |
| GACCTTTCTTGGTTGTGATA+GGG | - | chr4.1:79085598-79085617 | MS.gene73268:CDS | 40.0% | |
| GATTGTTAAGGAATGTGCTG+AGG | - | chr4.1:79085260-79085279 | MS.gene73268:CDS | 40.0% | |
| GCTGATAGCTCAACTAATCA+TGG | + | chr4.1:79085550-79085569 | None:intergenic | 40.0% | |
| GGTTAGTGCTATACTGACAT+TGG | - | chr4.1:79086462-79086481 | MS.gene73268:intron | 40.0% | |
| GTCTAGAAGAAATTCCAGCT+CGG | + | chr4.1:79087448-79087467 | None:intergenic | 40.0% | |
| TAAACTTGCCATTACCTCTG+TGG | - | chr4.1:79087349-79087368 | MS.gene73268:intron | 40.0% | |
| TAGACGAAGAACATTACGAG+AGG | - | chr4.1:79087463-79087482 | MS.gene73268:intron | 40.0% | |
| TAGAGGGGTGAGATTTGATT+CGG | - | chr4.1:79085173-79085192 | MS.gene73268:CDS | 40.0% | |
| TGACCTTTCTTGGTTGTGAT+AGG | - | chr4.1:79085597-79085616 | MS.gene73268:CDS | 40.0% | |
| TTAAGTCCATCATGCCACAA+AGG | + | chr4.1:79087582-79087601 | None:intergenic | 40.0% | |
| TTGTTCCATCGGTCACAAAA+AGG | + | chr4.1:79087608-79087627 | None:intergenic | 40.0% | |
| TTTGGGGATGAATAAGGAGA+AGG | - | chr4.1:79085143-79085162 | MS.gene73268:CDS | 40.0% | |
| ! | AAACCAAGGTCACTGCATTT+TGG | - | chr4.1:79087066-79087085 | MS.gene73268:intron | 40.0% |
| ! | AACCAAGGTCACTGCATTTT+GGG | - | chr4.1:79087067-79087086 | MS.gene73268:intron | 40.0% |
| ! | AAGTTCCTTTTTGTGACCGA+TGG | - | chr4.1:79087600-79087619 | MS.gene73268:CDS | 40.0% |
| ! | AGTTCTAACATCCCCTTCTA+TGG | - | chr4.1:79087263-79087282 | MS.gene73268:intron | 40.0% |
| ! | CAAGTCAATTTGAGGTTCAG+AGG | - | chr4.1:79086729-79086748 | MS.gene73268:intron | 40.0% |
| ! | CAGAGTTGATTCCATAGAAG+GGG | + | chr4.1:79087277-79087296 | None:intergenic | 40.0% |
| ! | TTATACCCCTTCTTTTGACG+GGG | - | chr4.1:79087641-79087660 | MS.gene73268:intron | 40.0% |
| ! | TTTGGGGAAGAGATGGTTTT+GGG | - | chr4.1:79085126-79085145 | MS.gene73268:CDS | 40.0% |
| !! | ATATCGCAATGGACTATTGG+TGG | - | chr4.1:79087834-79087853 | MS.gene73268:CDS | 40.0% |
| !! | CTTTACAAGCAGAGTTGGTA+GGG | - | chr4.1:79085690-79085709 | MS.gene73268:intron | 40.0% |
| !! | GTTTGATGATGATGGGAAGA+TGG | - | chr4.1:79085230-79085249 | MS.gene73268:CDS | 40.0% |
| !! | TGAGATTTGATTCGGGGTTT+CGG | - | chr4.1:79085181-79085200 | MS.gene73268:CDS | 40.0% |
| !! | TTGATGATGATGGGAAGATG+GGG | - | chr4.1:79085232-79085251 | MS.gene73268:CDS | 40.0% |
| !!! | GATGGTTTTGGGGATGAATA+AGG | - | chr4.1:79085137-79085156 | MS.gene73268:CDS | 40.0% |
| AAAGTTGGGGAGGATGAGTT+TGG | - | chr4.1:79085108-79085127 | MS.gene73268:CDS | 45.0% | |
| AAGATGGCTGTGCCTTTGTT+AGG | - | chr4.1:79086196-79086215 | MS.gene73268:intron | 45.0% | |
| AAGTGGTCCAAGAAGTTTGG+CGG | - | chr4.1:79087309-79087328 | MS.gene73268:intron | 45.0% | |
| AAGTTGGGGAGGATGAGTTT+GGG | - | chr4.1:79085109-79085128 | MS.gene73268:CDS | 45.0% | |
| AGAGGGGTGAGATTTGATTC+GGG | - | chr4.1:79085174-79085193 | MS.gene73268:CDS | 45.0% | |
| AGATGGCTGTGCCTTTGTTA+GGG | - | chr4.1:79086197-79086216 | MS.gene73268:intron | 45.0% | |
| AGATTTCCTCGGCAGTGTAA+TGG | + | chr4.1:79087557-79087576 | None:intergenic | 45.0% | |
| CAACTCTGCTTGTAAAGGGA+GGG | + | chr4.1:79085687-79085706 | None:intergenic | 45.0% | |
| CACAACCAAGAAAGGTCATC+TGG | + | chr4.1:79085595-79085614 | None:intergenic | 45.0% | |
| CAGCCGGAATTATATCGCAA+TGG | - | chr4.1:79087823-79087842 | MS.gene73268:CDS | 45.0% | |
| CCTACCAACTCTGCTTGTAA+AGG | + | chr4.1:79085692-79085711 | None:intergenic | 45.0% | |
| GACGGGGTGTAGTTATATGA+AGG | - | chr4.1:79085203-79085222 | MS.gene73268:CDS | 45.0% | |
| GATGGGGATGGAGATTGTTA+AGG | - | chr4.1:79085248-79085267 | MS.gene73268:CDS | 45.0% | |
| GCTGTCTCTCCAAAACATCT+TGG | + | chr4.1:79087788-79087807 | None:intergenic | 45.0% | |
| GTATTACCATTACACTGCCG+AGG | - | chr4.1:79087548-79087567 | MS.gene73268:intron | 45.0% | |
| TGAAGTTTCAAGAACCGAGC+TGG | - | chr4.1:79087431-79087450 | MS.gene73268:intron | 45.0% | |
| TGCATCCCTCGTCGTAAAAT+TGG | - | chr4.1:79085469-79085488 | MS.gene73268:CDS | 45.0% | |
| TGGACTATTGGTGGAGTTAG+AGG | - | chr4.1:79087843-79087862 | MS.gene73268:CDS | 45.0% | |
| TTCTGAGTAGCACTTTCGGT+AGG | + | chr4.1:79087873-79087892 | None:intergenic | 45.0% | |
| TTTGTTAGGGAAAGTTGGGG+AGG | - | chr4.1:79085098-79085117 | MS.gene73268:CDS | 45.0% | |
| ! | ACCAAGGTCACTGCATTTTG+GGG | - | chr4.1:79087068-79087087 | MS.gene73268:intron | 45.0% |
| ! | CCTTTACAAGCAGAGTTGGT+AGG | - | chr4.1:79085689-79085708 | MS.gene73268:intron | 45.0% |
| ! | GTTTGGGGAAGAGATGGTTT+TGG | - | chr4.1:79085125-79085144 | MS.gene73268:CDS | 45.0% |
| ! | TTTTACGACGAGGGATGCAT+CGG | + | chr4.1:79085468-79085487 | None:intergenic | 45.0% |
| !! | AGAGTTGGTAGGGTTGAGTT+AGG | - | chr4.1:79085700-79085719 | MS.gene73268:intron | 45.0% |
| !! | ATTTGATTCGGGGTTTCGGA+CGG | - | chr4.1:79085185-79085204 | MS.gene73268:CDS | 45.0% |
| !! | CGGCTTTGTTAGGGAAAGTT+GGG | - | chr4.1:79085094-79085113 | MS.gene73268:CDS | 45.0% |
| !! | GGCTTTGTTAGGGAAAGTTG+GGG | - | chr4.1:79085095-79085114 | MS.gene73268:CDS | 45.0% |
| !! | TTGGGGAAGAGATGGTTTTG+GGG | - | chr4.1:79085127-79085146 | MS.gene73268:CDS | 45.0% |
| ACCACAACCCCGTCAAAAGA+AGG | + | chr4.1:79087651-79087670 | None:intergenic | 50.0% | |
| ACCCCAAAATGCAGTGACCT+TGG | + | chr4.1:79087072-79087091 | None:intergenic | 50.0% | |
| ACGCTCCAGATGACCTTTCT+TGG | - | chr4.1:79085587-79085606 | MS.gene73268:CDS | 50.0% | |
| AGTTGGGGAGGATGAGTTTG+GGG | - | chr4.1:79085110-79085129 | MS.gene73268:CDS | 50.0% | |
| ATCTCGCCTTTGTGGCATGA+TGG | - | chr4.1:79087573-79087592 | MS.gene73268:intron | 50.0% | |
| CACAACCCCGTCAAAAGAAG+GGG | + | chr4.1:79087649-79087668 | None:intergenic | 50.0% | |
| CCAACTCTGCTTGTAAAGGG+AGG | + | chr4.1:79085688-79085707 | None:intergenic | 50.0% | |
| CCACAAAGGCGAGATTTCCT+CGG | + | chr4.1:79087568-79087587 | None:intergenic | 50.0% | |
| CCACAACCCCGTCAAAAGAA+GGG | + | chr4.1:79087650-79087669 | None:intergenic | 50.0% | |
| CCTCCCTTTACAAGCAGAGT+TGG | - | chr4.1:79085685-79085704 | MS.gene73268:intron | 50.0% | |
| CGTGATCTCCACAGAGGTAA+TGG | + | chr4.1:79087360-79087379 | None:intergenic | 50.0% | |
| CTACGTTTCGCTATTGCAGC+CGG | - | chr4.1:79087807-79087826 | MS.gene73268:CDS | 50.0% | |
| CTATCAGCTATTGGCCACTC+GGG | - | chr4.1:79085562-79085581 | MS.gene73268:CDS | 50.0% | |
| GATGTTACAATGGAAGCCGC+CGG | - | chr4.1:79085002-79085021 | MS.gene73268:CDS | 50.0% | |
| GCTATCAGCTATTGGCCACT+CGG | - | chr4.1:79085561-79085580 | MS.gene73268:CDS | 50.0% | |
| GGATGAGTTTGGGGAAGAGA+TGG | - | chr4.1:79085119-79085138 | MS.gene73268:CDS | 50.0% | |
| TATGTGTACCACTGCAGGCT+AGG | - | chr4.1:79087220-79087239 | MS.gene73268:intron | 50.0% | |
| TGGAAAATCCTAGCCTGCAG+TGG | + | chr4.1:79087231-79087250 | None:intergenic | 50.0% | |
| ! | AAGGAGAAGGTGCAGACTAG+AGG | - | chr4.1:79085156-79085175 | MS.gene73268:CDS | 50.0% |
| ! | ACTTGCGATAGAACTGGCTC+TGG | - | chr4.1:79087702-79087721 | MS.gene73268:intron | 50.0% |
| ! | AGGAGAAGGTGCAGACTAGA+GGG | - | chr4.1:79085157-79085176 | MS.gene73268:CDS | 50.0% |
| ! | GAGGGGTGAGATTTGATTCG+GGG | - | chr4.1:79085175-79085194 | MS.gene73268:CDS | 50.0% |
| ! | TCTTTTGACGGGGTTGTGGT+TGG | - | chr4.1:79087651-79087670 | MS.gene73268:intron | 50.0% |
| !! | GCGGCTTTGTTAGGGAAAGT+TGG | - | chr4.1:79085093-79085112 | MS.gene73268:CDS | 50.0% |
| !! | TGATGATGGGAAGATGGGGA+TGG | - | chr4.1:79085236-79085255 | MS.gene73268:CDS | 50.0% |
| !! | TGGCTCTGGTGATGCTATTG+TGG | - | chr4.1:79087716-79087735 | MS.gene73268:intron | 50.0% |
| !! | TTTGATTCGGGGTTTCGGAC+GGG | - | chr4.1:79085186-79085205 | MS.gene73268:CDS | 50.0% |
| CACAAGGCCGCCAAACTTCT+TGG | + | chr4.1:79087319-79087338 | None:intergenic | 55.0% | |
| CCGAGGAAATCTCGCCTTTG+TGG | - | chr4.1:79087565-79087584 | MS.gene73268:intron | 55.0% | |
| CTCTGCTTGTAAAGGGAGGG+AGG | + | chr4.1:79085684-79085703 | None:intergenic | 55.0% | |
| TCATCGCGTGATCTCCACAG+AGG | + | chr4.1:79087366-79087385 | None:intergenic | 55.0% | |
| ! | CCCTTCTTTTGACGGGGTTG+TGG | - | chr4.1:79087647-79087666 | MS.gene73268:intron | 55.0% |
| ! | GGAGAAGGTGCAGACTAGAG+GGG | - | chr4.1:79085158-79085177 | MS.gene73268:CDS | 55.0% |
| !! | TTGATTCGGGGTTTCGGACG+GGG | - | chr4.1:79085187-79085206 | MS.gene73268:CDS | 55.0% |
| ACATTCGACGGTGGCCCACC+AGG | + | chr4.1:79085042-79085061 | None:intergenic | 65.0% | |
| ATGTGGCGGTGGCCCATGTC+AGG | - | chr4.1:79085058-79085077 | MS.gene73268:CDS | 65.0% | |
| CCCATGTCAGGCTTGGCGGA+CGG | - | chr4.1:79085070-79085089 | MS.gene73268:CDS | 65.0% | |
| CCGTCCGCCAAGCCTGACAT+GGG | + | chr4.1:79085073-79085092 | None:intergenic | 65.0% | |
| GTGGCCCATGTCAGGCTTGG+CGG | - | chr4.1:79085066-79085085 | MS.gene73268:CDS | 65.0% | |
| TGGGCCACCGCCACATTCGA+CGG | + | chr4.1:79085054-79085073 | None:intergenic | 65.0% | |
| TGGGCCACCGTCGAATGTGG+CGG | - | chr4.1:79085044-79085063 | MS.gene73268:CDS | 65.0% | |
| ! | CATCTGGAGCGTGACCCGAG+TGG | + | chr4.1:79085579-79085598 | None:intergenic | 65.0% |
| ! | CCATGTCAGGCTTGGCGGAC+GGG | - | chr4.1:79085071-79085090 | MS.gene73268:CDS | 65.0% |
| ! | TGGTGGGCCACCGTCGAATG+TGG | - | chr4.1:79085041-79085060 | MS.gene73268:CDS | 65.0% |
| !! | GCGGACGGGCGGCTTTGTTA+GGG | - | chr4.1:79085085-79085104 | MS.gene73268:CDS | 65.0% |
| AGTTCGCGCGAGCGCCTGGT+GGG | - | chr4.1:79085025-79085044 | MS.gene73268:CDS | 70.0% | |
| CCCGTCCGCCAAGCCTGACA+TGG | + | chr4.1:79085074-79085093 | None:intergenic | 70.0% | |
| GCCACCGCCACATTCGACGG+TGG | + | chr4.1:79085051-79085070 | None:intergenic | 70.0% | |
| GCCACCGTCGAATGTGGCGG+TGG | - | chr4.1:79085047-79085066 | MS.gene73268:CDS | 70.0% | |
| GCGGTGGCCCATGTCAGGCT+TGG | - | chr4.1:79085063-79085082 | MS.gene73268:CDS | 70.0% | |
| ! | TGTCAGGCTTGGCGGACGGG+CGG | - | chr4.1:79085074-79085093 | MS.gene73268:CDS | 70.0% |
| !! | GGCGGACGGGCGGCTTTGTT+AGG | - | chr4.1:79085084-79085103 | MS.gene73268:CDS | 70.0% |
| CCAGGCGCTCGCGCGAACTC+CGG | + | chr4.1:79085024-79085043 | None:intergenic | 75.0% | |
| GAGTTCGCGCGAGCGCCTGG+TGG | - | chr4.1:79085024-79085043 | MS.gene73268:CDS | 75.0% | |
| ! | CCGGAGTTCGCGCGAGCGCC+TGG | - | chr4.1:79085021-79085040 | MS.gene73268:CDS | 80.0% |
| ! | GGCGCTCGCGCGAACTCCGG+CGG | + | chr4.1:79085021-79085040 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 79084973 | 79087929 | 79084973 | ID=MS.gene73268 |
| chr4.1 | mRNA | 79084973 | 79087929 | 79084973 | ID=MS.gene73268.t1;Parent=MS.gene73268 |
| chr4.1 | exon | 79087723 | 79087929 | 79087723 | ID=MS.gene73268.t1.exon1;Parent=MS.gene73268.t1 |
| chr4.1 | CDS | 79087723 | 79087929 | 79087723 | ID=cds.MS.gene73268.t1;Parent=MS.gene73268.t1 |
| chr4.1 | exon | 79087576 | 79087632 | 79087576 | ID=MS.gene73268.t1.exon2;Parent=MS.gene73268.t1 |
| chr4.1 | CDS | 79087576 | 79087632 | 79087576 | ID=cds.MS.gene73268.t1;Parent=MS.gene73268.t1 |
| chr4.1 | exon | 79084973 | 79085665 | 79084973 | ID=MS.gene73268.t1.exon3;Parent=MS.gene73268.t1 |
| chr4.1 | CDS | 79084973 | 79085665 | 79084973 | ID=cds.MS.gene73268.t1;Parent=MS.gene73268.t1 |
| Gene Sequence |
| Protein sequence |
