AlfalfaGEDB | MS.gene81384

M. sativa cultivar XinJiangDaYe / MS.gene81384

KEGG: -
GO: GO:0003674 GO:0003676 GO:0005488 GO:0043167 GO:0043169 GO:0046872 GO:0097159 GO:1901363
PFAM: PF00076.25 PF12872.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81384.t1	XP_003617718.2	97.3	551	12	1	1	551	1	548	0.00E+00	1088.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81384.t1	Q9SJ41	43.1	568	256	16	1	544	1	525	2.1e-105	384.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81384.t1	G7K4G1	97.3	551	12	1	1	551	1	548	0.0e+00	1088.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049217	MS.gene81384	0.823722	1.19E-53	-1.69E-46
MS.gene049609	MS.gene81384	0.818722	1.69E-52	-1.69E-46
MS.gene050380	MS.gene81384	-0.837501	5.01E-57	-1.69E-46
MS.gene050381	MS.gene81384	-0.806858	6.71E-50	-1.69E-46
MS.gene050520	MS.gene81384	0.803559	3.29E-49	-1.69E-46
MS.gene050593	MS.gene81384	0.815503	8.94E-52	-1.69E-46
MS.gene050686	MS.gene81384	0.806391	8.41E-50	-1.69E-46
MS.gene050772	MS.gene81384	0.828671	7.90E-55	-1.69E-46
MS.gene05105	MS.gene81384	0.809295	2.03E-50	-1.69E-46
MS.gene051255	MS.gene81384	0.831757	1.39E-55	-1.69E-46
MS.gene051387	MS.gene81384	0.827598	1.43E-54	-1.69E-46
MS.gene051692	MS.gene81384	0.804308	2.30E-49	-1.69E-46
MS.gene051694	MS.gene81384	0.82079	5.69E-53	-1.69E-46
MS.gene051858	MS.gene81384	0.862899	3.66E-64	-1.69E-46
MS.gene051877	MS.gene81384	0.815558	8.69E-52	-1.69E-46
MS.gene052484	MS.gene81384	0.80686	6.70E-50	-1.69E-46
MS.gene052485	MS.gene81384	0.813322	2.71E-51	-1.69E-46
MS.gene052615	MS.gene81384	0.804618	1.98E-49	-1.69E-46
MS.gene052999	MS.gene81384	0.807574	4.73E-50	-1.69E-46
MS.gene053018	MS.gene81384	0.827782	1.29E-54	-1.69E-46
MS.gene053207	MS.gene81384	0.803406	3.54E-49	-1.69E-46
MS.gene053213	MS.gene81384	0.811033	8.57E-51	-1.69E-46
MS.gene053322	MS.gene81384	0.800465	1.42E-48	-1.69E-46
MS.gene053449	MS.gene81384	0.804434	2.16E-49	-1.69E-46
MS.gene053505	MS.gene81384	0.800724	1.26E-48	-1.69E-46
MS.gene053574	MS.gene81384	0.820395	7.02E-53	-1.69E-46
MS.gene053813	MS.gene81384	0.81376	2.17E-51	-1.69E-46
MS.gene053824	MS.gene81384	0.802339	5.88E-49	-1.69E-46
MS.gene054595	MS.gene81384	0.802677	5.01E-49	-1.69E-46
MS.gene05492	MS.gene81384	0.815669	8.21E-52	-1.69E-46
MS.gene05505	MS.gene81384	0.820646	6.15E-53	-1.69E-46
MS.gene055206	MS.gene81384	0.838607	2.60E-57	-1.69E-46
MS.gene055289	MS.gene81384	0.809406	1.92E-50	-1.69E-46
MS.gene055647	MS.gene81384	0.811488	6.83E-51	-1.69E-46
MS.gene055722	MS.gene81384	0.847996	8.12E-60	-1.69E-46
MS.gene055911	MS.gene81384	0.801865	7.36E-49	-1.69E-46
MS.gene05592	MS.gene81384	0.810987	8.77E-51	-1.69E-46
MS.gene055941	MS.gene81384	0.805826	1.11E-49	-1.69E-46
MS.gene056166	MS.gene81384	0.804841	1.78E-49	-1.69E-46
MS.gene056410	MS.gene81384	0.812186	4.81E-51	-1.69E-46
MS.gene056422	MS.gene81384	0.831201	1.91E-55	-1.69E-46
MS.gene056448	MS.gene81384	0.847394	1.19E-59	-1.69E-46
MS.gene056452	MS.gene81384	0.819362	1.21E-52	-1.69E-46
MS.gene056511	MS.gene81384	0.810196	1.30E-50	-1.69E-46
MS.gene056549	MS.gene81384	0.802219	6.22E-49	-1.69E-46
MS.gene056942	MS.gene81384	0.820491	6.67E-53	-1.69E-46
MS.gene057146	MS.gene81384	0.817295	3.55E-52	-1.69E-46
MS.gene057331	MS.gene81384	0.800671	1.29E-48	-1.69E-46
MS.gene057416	MS.gene81384	0.819377	1.20E-52	-1.69E-46
MS.gene05837	MS.gene81384	0.820108	8.16E-53	-1.69E-46
MS.gene05883	MS.gene81384	0.808874	2.50E-50	-1.69E-46
MS.gene058840	MS.gene81384	-0.828017	1.14E-54	-1.69E-46
MS.gene05934	MS.gene81384	0.808401	3.15E-50	-1.69E-46
MS.gene059536	MS.gene81384	0.826444	2.70E-54	-1.69E-46
MS.gene059711	MS.gene81384	0.820745	5.83E-53	-1.69E-46
MS.gene059902	MS.gene81384	0.865399	6.07E-65	-1.69E-46
MS.gene06046	MS.gene81384	0.800677	1.29E-48	-1.69E-46
MS.gene060482	MS.gene81384	0.844154	9.01E-59	-1.69E-46
MS.gene060804	MS.gene81384	0.814344	1.62E-51	-1.69E-46
MS.gene060818	MS.gene81384	0.821888	3.18E-53	-1.69E-46
MS.gene060837	MS.gene81384	0.876428	1.41E-68	-1.69E-46
MS.gene06092	MS.gene81384	0.80113	1.04E-48	-1.69E-46
MS.gene061200	MS.gene81384	0.828187	1.03E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81384.t1	MTR_5g094700	97.278	551	12	1	1	551	1	548	0.0	1124
MS.gene81384.t1	MTR_3g056160	60.326	552	185	10	1	548	1	522	0.0	636
MS.gene81384.t1	MTR_3g436060	35.063	559	235	23	1	479	1	511	2.31e-62	218
MS.gene81384.t1	MTR_5g008900	34.896	384	182	13	119	479	186	524	5.25e-47	175
MS.gene81384.t1	MTR_0005s0130	51.974	152	66	2	335	479	321	472	8.14e-38	148
MS.gene81384.t1	MTR_0005s0130	29.258	229	121	6	1	208	1	209	4.56e-16	82.0
MS.gene81384.t1	MTR_4g043660	51.974	152	66	2	335	479	321	472	8.14e-38	148
MS.gene81384.t1	MTR_4g043660	29.258	229	121	6	1	208	1	209	4.56e-16	82.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene81384.t1	AT2G05160	42.531	569	258	16	1	544	1	525	2.39e-132	396
MS.gene81384.t1	AT2G05160	42.531	569	258	16	1	544	1	525	2.39e-132	396
MS.gene81384.t1	AT2G05160	46.960	477	211	12	1	466	1	446	5.10e-130	389
MS.gene81384.t1	AT3G52980	46.135	401	172	10	1	395	1	363	8.14e-103	315
MS.gene81384.t1	AT3G51950	32.124	579	255	20	1	546	1	474	5.77e-59	205
MS.gene81384.t1	AT3G51950	32.124	579	255	20	1	546	1	474	5.77e-59	205
MS.gene81384.t1	AT3G51950	32.124	579	255	20	1	546	1	474	5.77e-59	205
MS.gene81384.t1	AT3G51950	32.124	579	255	20	1	546	1	474	5.77e-59	205
MS.gene81384.t1	AT3G21100	33.075	517	262	20	1	479	1	471	9.11e-53	189
MS.gene81384.t1	AT3G21100	33.075	517	262	20	1	479	1	471	9.11e-53	189
MS.gene81384.t1	AT3G21100	33.012	518	262	20	1	479	1	472	3.47e-52	188
MS.gene81384.t1	AT3G21100	33.012	518	262	20	1	479	1	472	3.47e-52	188
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	231	510	4.77e-42	160
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	262	541	1.09e-41	159
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	262	541	1.09e-41	159
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	262	541	1.09e-41	159
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	262	541	1.09e-41	159
MS.gene81384.t1	AT5G12440	36.943	314	143	13	187	479	262	541	1.09e-41	159
MS.gene81384.t1	AT3G63450	51.656	151	57	3	329	479	39	173	5.55e-35	134
MS.gene81384.t1	AT1G51520	54.545	110	50	0	316	425	245	354	3.22e-34	134
MS.gene81384.t1	AT3G63450	53.103	145	52	3	335	479	153	281	5.62e-34	133
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.02e-13	73.6
MS.gene81384.t1	AT3G63450	53.103	145	52	3	335	479	153	281	5.62e-34	133
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.02e-13	73.6
MS.gene81384.t1	AT1G51520	54.545	110	50	0	316	425	245	354	6.84e-34	135
MS.gene81384.t1	AT3G63450	53.103	145	54	4	335	479	153	283	9.86e-34	132
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.09e-13	73.6
MS.gene81384.t1	AT3G63450	53.103	145	54	4	335	479	153	283	9.86e-34	132
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.09e-13	73.6
MS.gene81384.t1	AT3G63450	53.103	145	54	4	335	479	153	283	9.86e-34	132
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.09e-13	73.6
MS.gene81384.t1	AT3G63450	53.103	145	54	4	335	479	153	283	1.37e-33	132
MS.gene81384.t1	AT3G63450	56.452	62	27	0	1	62	1	62	1.29e-13	73.2
MS.gene81384.t1	AT1G51530	36.496	137	71	4	348	479	185	310	4.47e-12	68.6

Find 114 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCCCATTTCACCTCATTT+TGG	0.145853	5.2:-79874043	MS.gene81384:CDS
TGAAACTGTGAGAATGATTT+TGG	0.186946	5.2:-79876404	MS.gene81384:CDS
CATCGGTGAAGTCGTCTTTA+AGG	0.237792	5.2:-79877607	MS.gene81384:CDS
GATGTTTCTGCTGTCAATTT+TGG	0.256613	5.2:-79877270	MS.gene81384:CDS
AAAATCATTCTCACAGTTTC+AGG	0.261214	5.2:+79876406	None:intergenic
TTCAAGTTCCATCTTCCTAT+TGG	0.269145	5.2:-79877461	MS.gene81384:CDS
TGCAGATCATTTCAATTTCC+AGG	0.277618	5.2:-79873897	MS.gene81384:intron
GAAAATGCTAGAAAGATTAT+TGG	0.297193	5.2:-79877696	MS.gene81384:CDS
GTGTGCTTGTGAAACCTTAC+AGG	0.303127	5.2:-79876348	MS.gene81384:CDS
TCCAATGGAAAATGATAAAT+AGG	0.307495	5.2:-79873316	None:intergenic
CTATGGTTCCCATAACTTCT+TGG	0.316770	5.2:+79874157	None:intergenic
ACAAACGCAATTGCTGAGTT+TGG	0.320917	5.2:-79877361	MS.gene81384:CDS
CGGACAACATGCAGTGGTTC+TGG	0.321883	5.2:-79876737	MS.gene81384:CDS
TCAAGTTCCATCTTCCTATT+GGG	0.324176	5.2:-79877460	MS.gene81384:CDS
TAATTCATTCCCGTAAATTC+AGG	0.326064	5.2:+79877411	None:intergenic
ATACTATGATAAATATAAAA+AGG	0.328732	5.2:-79876962	MS.gene81384:CDS
CAAAACTGATCTTCAAATAA+TGG	0.329252	5.2:-79877583	MS.gene81384:CDS
CCTTGTTGAGGGTTGACATT+AGG	0.334473	5.2:+79877528	None:intergenic
CAATGCAAATCCTGAATTTA+CGG	0.340099	5.2:-79877421	MS.gene81384:CDS
TGCCAGCAGAAAAGAATGTT+TGG	0.350390	5.2:-79876448	MS.gene81384:CDS
CATTATTTGAAGATCAGTTT+TGG	0.350768	5.2:+79877584	None:intergenic
AAACCCAAAATGAGGTGAAA+TGG	0.352315	5.2:+79874039	None:intergenic
GGAATCAGTGTCAGTATTCT+TGG	0.353353	5.2:+79873838	None:intergenic
ATCTCTAAGTAGACAGTTGA+TGG	0.353788	5.2:-79874134	MS.gene81384:CDS
GCTGAGTTTGGAGAATCATT+TGG	0.355136	5.2:-79877349	MS.gene81384:CDS
ACGGAGATAATGCCGGAAAA+TGG	0.364430	5.2:+79877499	None:intergenic
TTGGGTATGTTGAAGATGTT+AGG	0.367518	5.2:-79876477	MS.gene81384:CDS
ACCTTTGTCTTCTCCCTGTA+AGG	0.370558	5.2:+79876334	None:intergenic
TTATTCAACGCATGATTTAG+AGG	0.390101	5.2:+79873866	None:intergenic
TTGACATTAGGTGGCGGAAT+TGG	0.398675	5.2:+79877540	None:intergenic
AAATTCAGGATTTGCATTGC+TGG	0.403668	5.2:+79877425	None:intergenic
TTGGTGGAAAAGCTACAAAA+AGG	0.409932	5.2:-79877251	MS.gene81384:CDS
TATGCAGTTCCAAGAAGTTA+TGG	0.410433	5.2:-79874166	MS.gene81384:intron
AACAGCAAGACCTCGAGTTC+CGG	0.412720	5.2:+79877314	None:intergenic
AATGCAAATCCTGAATTTAC+GGG	0.416071	5.2:-79877420	MS.gene81384:CDS
CTGATTCCTCTGGAGGGAAT+AGG	0.424239	5.2:-79873823	MS.gene81384:intron
GCCAGCAGAAAAGAATGTTT+GGG	0.424611	5.2:-79876447	MS.gene81384:CDS
AGCCAGCGACATGGTAAGTC+TGG	0.430698	5.2:-79876910	MS.gene81384:CDS
AGACAATGGCGAACAAGAAA+TGG	0.433416	5.2:-79877658	MS.gene81384:CDS
GGAAATGCAAATGGACTGTC+GGG	0.437019	5.2:+79873336	None:intergenic
ATAGTATTCGGCTAATTGAT+AGG	0.438290	5.2:-79876855	MS.gene81384:intron
ATCTGTCATTATTTCAGTAA+AGG	0.443297	5.2:-79877192	MS.gene81384:CDS
TGCTCCAAAATACATTCAAA+AGG	0.443413	5.2:-79876707	MS.gene81384:CDS
AACCCAAAATGAGGTGAAAT+GGG	0.452356	5.2:+79874040	None:intergenic
ACTGTCTACTTAGAGATCTA+TGG	0.458496	5.2:+79874140	None:intergenic
ATGCAGTTCCAAGAAGTTAT+GGG	0.460814	5.2:-79874165	MS.gene81384:intron
GGTAGATTGTGGATCCCAAT+AGG	0.466096	5.2:+79877446	None:intergenic
TCGCGCGACTCAATAGTATT+CGG	0.471471	5.2:-79876867	MS.gene81384:CDS
TCAGTGAAAGTGCTGTCAGC+TGG	0.477338	5.2:+79876634	None:intergenic
CAGTCCATTTGCATTTCCAA+TGG	0.489547	5.2:-79873331	MS.gene81384:CDS
GATTTAGAGGTTCCGCAGCC+TGG	0.497491	5.2:+79873879	None:intergenic
AGGTGGCGGAATTGGCATCA+TGG	0.499716	5.2:+79877548	None:intergenic
TAATACTAGCAATGAGGATC+CGG	0.502530	5.2:-79877085	MS.gene81384:CDS
CGAACAAGAAATGGCTAGGT+TGG	0.502766	5.2:-79877649	MS.gene81384:CDS
ATTTACGGGAATGAATTACA+TGG	0.507052	5.2:-79877406	MS.gene81384:CDS
AATGGCTTAAACCTTGTTGA+GGG	0.515579	5.2:+79877517	None:intergenic
CATTTGGATCATGTGAATAC+CGG	0.523621	5.2:-79877333	MS.gene81384:CDS
GCTGTTAATGATTACAACAA+TGG	0.523781	5.2:-79877297	MS.gene81384:CDS
CAGGAGGTACCATGATAGAA+TGG	0.527118	5.2:-79874427	MS.gene81384:CDS
CAGAGTGCTCCATTCTATCA+TGG	0.527589	5.2:+79874418	None:intergenic
TGTTGAGGGTTGACATTAGG+TGG	0.528211	5.2:+79877531	None:intergenic
TCATTTCAATTTCCAGGCTG+CGG	0.529484	5.2:-79873891	MS.gene81384:CDS
AATACTGACACTGATTCCTC+TGG	0.530154	5.2:-79873833	MS.gene81384:CDS
GGAAATCCTCATTATGTTCG+TGG	0.530432	5.2:-79876376	MS.gene81384:CDS
AAATGAGGTGAAATGGGAAA+AGG	0.531747	5.2:+79874046	None:intergenic
GTCAATTGCTTCGCTGCCGA+TGG	0.532551	5.2:-79876986	MS.gene81384:CDS
GCTCCAAAATACATTCAAAA+GGG	0.534969	5.2:-79876706	MS.gene81384:CDS
AGTAAAGGTTACTGTAGGCA+TGG	0.535811	5.2:-79877177	MS.gene81384:CDS
TGGAAATGCAAATGGACTGT+CGG	0.541995	5.2:+79873335	None:intergenic
ACTTCACCGATGATGTGGTC+AGG	0.542534	5.2:+79877618	None:intergenic
GAGGATCCGGTGATTTCACC+AGG	0.545221	5.2:-79877072	MS.gene81384:CDS
TGACAGCACTTTCACTGAAG+AGG	0.547716	5.2:-79876629	MS.gene81384:CDS
AAATGGCTTAAACCTTGTTG+AGG	0.548876	5.2:+79877516	None:intergenic
ATTTCAGTAAAGGTTACTGT+AGG	0.554494	5.2:-79877182	MS.gene81384:CDS
TGAAATGGGAAAAGGTCGTC+GGG	0.556222	5.2:+79874054	None:intergenic
TCTTGTCCTGACCACATCAT+CGG	0.557055	5.2:-79877624	MS.gene81384:CDS
TGTGGATCCCAATAGGAAGA+TGG	0.559950	5.2:+79877453	None:intergenic
GACAGTTTCTCTCATATGCA+TGG	0.561615	5.2:-79877117	MS.gene81384:CDS
AGCCAGACTTACCATGTCGC+TGG	0.562095	5.2:+79876908	None:intergenic
AGAAGACAAAGGTTGTTGAA+AGG	0.562426	5.2:-79876324	MS.gene81384:intron
TCGATATTTGCAAAGTGATG+TGG	0.563281	5.2:+79874387	None:intergenic
GGCAGCGAAGCAATTGACAT+TGG	0.563893	5.2:+79876991	None:intergenic
CGAGAGCCACGAACATAATG+AGG	0.570909	5.2:+79876370	None:intergenic
GGAACTCTCAACGCATCCAT+AGG	0.573720	5.2:+79874016	None:intergenic
TGAAAGTTCAGCGGTGAAGA+CGG	0.575317	5.2:+79877480	None:intergenic
TATTTATCATAGTATGCCAT+CGG	0.579740	5.2:+79876970	None:intergenic
TTTGCATTGCTGGTAGATTG+TGG	0.579975	5.2:+79877435	None:intergenic
TCCATAGGAAACCCAAAATG+AGG	0.584131	5.2:+79874031	None:intergenic
ATGGCGAACAAGAAATGGCT+AGG	0.597763	5.2:-79877653	MS.gene81384:CDS
AAATAATGACAGATCTTGAG+TGG	0.598237	5.2:+79877201	None:intergenic
GTGAAATGGGAAAAGGTCGT+CGG	0.599339	5.2:+79874053	None:intergenic
TGGTTGATTTACAGGCCTCA+CGG	0.603591	5.2:-79876757	MS.gene81384:intron
TCTATCTGAGCTAGTGACCC+TGG	0.610875	5.2:+79877054	None:intergenic
AGACGACTTCACCGATGATG+TGG	0.612232	5.2:+79877613	None:intergenic
AGTGACCCTGGTGAAATCAC+CGG	0.612483	5.2:+79877066	None:intergenic
ACTGACACTGATTCCTCTGG+AGG	0.617261	5.2:-79873830	MS.gene81384:CDS
CCTAATGTCAACCCTCAACA+AGG	0.617801	5.2:-79877528	MS.gene81384:CDS
CATGTGAATACCGGAACTCG+AGG	0.623739	5.2:-79877324	MS.gene81384:CDS
GGTGAAGACGGAGATAATGC+CGG	0.634024	5.2:+79877492	None:intergenic
TGAGGGTTGACATTAGGTGG+CGG	0.637168	5.2:+79877534	None:intergenic
TGTATACCTATTCCCTCCAG+AGG	0.656241	5.2:+79873817	None:intergenic
TAATGATAATACTAGCAATG+AGG	0.661063	5.2:-79877091	MS.gene81384:CDS
GCCTCACGGACAACATGCAG+TGG	0.661109	5.2:-79876743	MS.gene81384:CDS
CTGACACTGATTCCTCTGGA+GGG	0.669158	5.2:-79873829	MS.gene81384:CDS
ACCACTGCATGTTGTCCGTG+AGG	0.679392	5.2:+79876742	None:intergenic
TGTGCTTGTGAAACCTTACA+GGG	0.679592	5.2:-79876347	MS.gene81384:CDS
ACCTTACAGGGAGAAGACAA+AGG	0.680060	5.2:-79876335	MS.gene81384:CDS
GATGGAACTTGAAAGTTCAG+CGG	0.682151	5.2:+79877471	None:intergenic
TTAACTGAGAGCCAGCGACA+TGG	0.684743	5.2:-79876919	MS.gene81384:CDS
AAAGGTTACTGTAGGCATGG+AGG	0.699149	5.2:-79877174	MS.gene81384:CDS
GATGCGTTGAGAGTTCCAGA+TGG	0.726483	5.2:-79874010	MS.gene81384:intron
GAAATGCAAATGGACTGTCG+GGG	0.728060	5.2:+79873337	None:intergenic
ATATGAGAGAAACTGTCGTG+AGG	0.740773	5.2:+79877123	None:intergenic
AGGATCCGGTGATTTCACCA+GGG	0.749562	5.2:-79877071	MS.gene81384:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATACTATGATAAATATAAAA+AGG	-	chr5.2:79874108-79874127	MS.gene81384:CDS	10.0%
!!	TCTTTAATAATTATTAACTT+CGG	-	chr5.2:79876611-79876630	MS.gene81384:CDS	10.0%
!!!	AAGTAAATTATTACATTTTT+TGG	-	chr5.2:79874481-79874500	MS.gene81384:intron	10.0%
!!	ATAAATTATACAAGTTTGAA+GGG	-	chr5.2:79876406-79876425	MS.gene81384:CDS	15.0%
!!	ATTATACGTATTAGTAAATT+TGG	-	chr5.2:79874541-79874560	MS.gene81384:intron	15.0%
!!!	ATATTATAGTTCCTTATTTA+TGG	-	chr5.2:79875354-79875373	MS.gene81384:intron	15.0%
!!!	TCTTTTCTTTTTGATAATAA+AGG	-	chr5.2:79874782-79874801	MS.gene81384:intron	15.0%
!!	AACTTTACAAGCATAAATTA+TGG	+	chr5.2:79875514-79875533	None:intergenic	20.0%
!!	AATATGATTTATGTCAAGAA+AGG	+	chr5.2:79877625-79877644	None:intergenic	20.0%
!!	AATTTATGCTTGTAAAGTTA+TGG	-	chr5.2:79875515-79875534	MS.gene81384:intron	20.0%
!!	ATTATCAAAAAGAAAAGACA+AGG	+	chr5.2:79874780-79874799	None:intergenic	20.0%
!!	ATTTATGCTTCTGATTTAAA+TGG	-	chr5.2:79874887-79874906	MS.gene81384:intron	20.0%
!!	CATAAATTATACAAGTTTGA+AGG	-	chr5.2:79876405-79876424	MS.gene81384:CDS	20.0%
!!	TAAAAAACAAAAAACCTTAC+TGG	-	chr5.2:79876816-79876835	MS.gene81384:intron	20.0%
!!	TTAAAGAAAACATTCATCAT+AGG	+	chr5.2:79876598-79876617	None:intergenic	20.0%
!!	TTTATGCTTCTGATTTAAAT+GGG	-	chr5.2:79874888-79874907	MS.gene81384:intron	20.0%
!!!	ATAGTAATTGAGAGTATAAA+TGG	+	chr5.2:79875819-79875838	None:intergenic	20.0%
!!!	ATCATAACTTTGCATATTTT+AGG	+	chr5.2:79876471-79876490	None:intergenic	20.0%
!!!	CACTGACAAAAAAAATATTT+TGG	-	chr5.2:79876570-79876589	MS.gene81384:intron	20.0%
!!!	TATAGTTTTTAAATGTTGTG+AGG	-	chr5.2:79875836-79875855	MS.gene81384:intron	20.0%
!!!	TTTCATTGATTATTGACAAA+GGG	-	chr5.2:79875251-79875270	MS.gene81384:intron	20.0%
!!!	TTTTCATTGATTATTGACAA+AGG	-	chr5.2:79875250-79875269	MS.gene81384:intron	20.0%
!	AAACAAGTGTCAATAAGTAT+AGG	+	chr5.2:79874511-79874530	None:intergenic	25.0%
!	ACTCCAAAATATAAGAAAAC+TGG	-	chr5.2:79875698-79875717	MS.gene81384:intron	25.0%
!	AGTGTACATTGTATGTAATA+AGG	-	chr5.2:79876271-79876290	MS.gene81384:intron	25.0%
!	ATCTGTCATTATTTCAGTAA+AGG	-	chr5.2:79873878-79873897	MS.gene81384:CDS	25.0%
!	ATGTGTACAACTTCAAAAAA+TGG	+	chr5.2:79875015-79875034	None:intergenic	25.0%
!	CAAAACTGATCTTCAAATAA+TGG	-	chr5.2:79873487-79873506	MS.gene81384:intron	25.0%
!	CAGAACAATAGATTCAAATT+CGG	+	chr5.2:79877457-79877476	None:intergenic	25.0%
!	CGTCTAAAAAAATGTTTGAA+GGG	-	chr5.2:79875175-79875194	MS.gene81384:intron	25.0%
!	CTCCAAAATATAAGAAAACT+GGG	-	chr5.2:79875699-79875718	MS.gene81384:intron	25.0%
!	GAAAATGCTAGAAAGATTAT+TGG	-	chr5.2:79873374-79873393	MS.gene81384:intron	25.0%
!	GAGGTGTATAAAAATGATTT+GGG	-	chr5.2:79875855-79875874	MS.gene81384:intron	25.0%
!	GTGTACATTGTATGTAATAA+GGG	-	chr5.2:79876272-79876291	MS.gene81384:intron	25.0%
!	TAATGATAATACTAGCAATG+AGG	-	chr5.2:79873979-79873998	MS.gene81384:intron	25.0%
!	TATAACAGTGACCATAAATA+AGG	+	chr5.2:79875368-79875387	None:intergenic	25.0%
!	TATTTATCATAGTATGCCAT+CGG	+	chr5.2:79874103-79874122	None:intergenic	25.0%
!	TATTTCGAGAACTATAGTAA+TGG	-	chr5.2:79876195-79876214	MS.gene81384:intron	25.0%
!	TCGTCTAAAAAAATGTTTGA+AGG	-	chr5.2:79875174-79875193	MS.gene81384:intron	25.0%
!	TGAGGTGTATAAAAATGATT+TGG	-	chr5.2:79875854-79875873	MS.gene81384:intron	25.0%
!	TGGTTTATTTAACATCACAA+AGG	-	chr5.2:79876439-79876458	MS.gene81384:CDS	25.0%
!	TTCAATTAGCATAACAATGA+AGG	+	chr5.2:79877142-79877161	None:intergenic	25.0%
!	TTTATAGAATCTAATCACAG+AGG	+	chr5.2:79876800-79876819	None:intergenic	25.0%
!!	AAGTAACCTTTCCATATTTT+CGG	+	chr5.2:79875751-79875770	None:intergenic	25.0%
!!	CATTATTTGAAGATCAGTTT+TGG	+	chr5.2:79873489-79873508	None:intergenic	25.0%
!!	CATTTTTCATAGTCATGTTT+AGG	-	chr5.2:79875301-79875320	MS.gene81384:intron	25.0%
!!	TATCAAATTTGCCTTTTGAT+AGG	+	chr5.2:79877361-79877380	None:intergenic	25.0%
!!	TATCTTCTTTTACAAGACAA+TGG	-	chr5.2:79873398-79873417	MS.gene81384:intron	25.0%
!!	TTCATTGATTATTGACAAAG+GGG	-	chr5.2:79875252-79875271	MS.gene81384:intron	25.0%
!!	TTCCCAGTTTTCTTATATTT+TGG	+	chr5.2:79875704-79875723	None:intergenic	25.0%
!!!	ATAATCTTTCTAGCATTTTC+AGG	+	chr5.2:79873374-79873393	None:intergenic	25.0%
!!!	ATATGGTATTGGTTCAAAAT+TGG	-	chr5.2:79877479-79877498	MS.gene81384:CDS	25.0%
!!!	ATGTTTAGGTTTTATGATGT+TGG	-	chr5.2:79875315-79875334	MS.gene81384:intron	25.0%
!!!	ATTTGTTATGGTTGATTTAC+AGG	-	chr5.2:79874305-79874324	MS.gene81384:intron	25.0%
!!!	CTCTAGTTTGAAATTTGTTA+TGG	-	chr5.2:79874293-79874312	MS.gene81384:intron	25.0%
!!!	GATATTTTTGACCGAAAATA+TGG	-	chr5.2:79875737-79875756	MS.gene81384:intron	25.0%
!!!	TATGGTATTGGTTCAAAATT+GGG	-	chr5.2:79877480-79877499	MS.gene81384:CDS	25.0%
	AAAATCATTCTCACAGTTTC+AGG	+	chr5.2:79874667-79874686	None:intergenic	30.0%
	AAATAATGACAGATCTTGAG+TGG	+	chr5.2:79873872-79873891	None:intergenic	30.0%
	AAATACGACCAAGTTATAGA+AGG	-	chr5.2:79875634-79875653	MS.gene81384:intron	30.0%
	AAATCAATGTAGTCAGGATT+GGG	+	chr5.2:79876145-79876164	None:intergenic	30.0%
	AATGCAAATCCTGAATTTAC+GGG	-	chr5.2:79873650-79873669	MS.gene81384:intron	30.0%
	AATTGTTCTACATTGTGAAC+CGG	+	chr5.2:79876768-79876787	None:intergenic	30.0%
	AATTTCACTAGAGGCTAAAA+TGG	-	chr5.2:79877410-79877429	MS.gene81384:CDS	30.0%
	AGTAGGCACATATCTATATA+TGG	-	chr5.2:79875035-79875054	MS.gene81384:intron	30.0%
	ATAGTATTCGGCTAATTGAT+AGG	-	chr5.2:79874215-79874234	MS.gene81384:intron	30.0%
	ATTGTTCTGCAATATGGTAT+TGG	-	chr5.2:79877468-79877487	MS.gene81384:CDS	30.0%
	ATTTACGGGAATGAATTACA+TGG	-	chr5.2:79873664-79873683	MS.gene81384:intron	30.0%
	ATTTATGTTTCCATGAGTAC+TGG	-	chr5.2:79876345-79876364	MS.gene81384:CDS	30.0%
	ATTTCAGTAAAGGTTACTGT+AGG	-	chr5.2:79873888-79873907	MS.gene81384:CDS	30.0%
	CAAAAAAACAGAGAAAACAG+AGG	+	chr5.2:79876018-79876037	None:intergenic	30.0%
	CAAATGGAGATGATAGAAAA+TGG	-	chr5.2:79876220-79876239	MS.gene81384:intron	30.0%
	CAAGCATAAATTATGGACAA+TGG	+	chr5.2:79875507-79875526	None:intergenic	30.0%
	CAATGCAAATCCTGAATTTA+CGG	-	chr5.2:79873649-79873668	MS.gene81384:intron	30.0%
	CTACATTAAAACATACCATC+TGG	+	chr5.2:79877078-79877097	None:intergenic	30.0%
	CTTGTAAAGTTATGGTATCT+TGG	-	chr5.2:79875523-79875542	MS.gene81384:intron	30.0%
	GAATCTATTGTTCTGCAATA+TGG	-	chr5.2:79877462-79877481	MS.gene81384:CDS	30.0%
	GCAAAAAACAGAACAAACAT+AGG	+	chr5.2:79875988-79876007	None:intergenic	30.0%
	GCTCCAAAATACATTCAAAA+GGG	-	chr5.2:79874364-79874383	MS.gene81384:intron	30.0%
	GCTGTTAATGATTACAACAA+TGG	-	chr5.2:79873773-79873792	MS.gene81384:intron	30.0%
	GTATAAATGGAGAAAGGAAA+TGG	+	chr5.2:79875806-79875825	None:intergenic	30.0%
	GTTACTTGTATAGGAGAAAT+AGG	-	chr5.2:79875764-79875783	MS.gene81384:intron	30.0%
	TAAATTATGGACAATGGAAC+AGG	+	chr5.2:79875501-79875520	None:intergenic	30.0%
	TAATTCATTCCCGTAAATTC+AGG	+	chr5.2:79873662-79873681	None:intergenic	30.0%
	TATGATGAATGCTTATTCCT+CGG	-	chr5.2:79874952-79874971	MS.gene81384:intron	30.0%
	TATGGAAAGGTTACTTGTAT+AGG	-	chr5.2:79875755-79875774	MS.gene81384:intron	30.0%
	TGCTCCAAAATACATTCAAA+AGG	-	chr5.2:79874363-79874382	MS.gene81384:intron	30.0%
	TTAACTTCGGTATGTATTTC+AGG	-	chr5.2:79876624-79876643	MS.gene81384:CDS	30.0%
	TTATACAAGTTTGAAGGGTA+TGG	-	chr5.2:79876411-79876430	MS.gene81384:CDS	30.0%
	TTATTCAACGCATGATTTAG+AGG	+	chr5.2:79877207-79877226	None:intergenic	30.0%
	TTTGTTCACAATTTCACTAG+AGG	-	chr5.2:79877401-79877420	MS.gene81384:CDS	30.0%
!	AACAAGCTTTTGAATTGCAA+AGG	-	chr5.2:79876968-79876987	MS.gene81384:CDS	30.0%
!	AACTATAGTAATGGAGCAAA+TGG	-	chr5.2:79876204-79876223	MS.gene81384:intron	30.0%
!	CAGTTTTGCATTGAAAAGTA+AGG	-	chr5.2:79875578-79875597	MS.gene81384:intron	30.0%
!	GGTAACTGTAGATATTTTCA+TGG	-	chr5.2:79873917-79873936	MS.gene81384:intron	30.0%
!	TAACTTGGTCGTATTTCTAT+AGG	+	chr5.2:79875630-79875649	None:intergenic	30.0%
!	TCTCCCTTTTGAATGTATTT+TGG	+	chr5.2:79874370-79874389	None:intergenic	30.0%
!	TGAAACTGTGAGAATGATTT+TGG	-	chr5.2:79874666-79874685	MS.gene81384:intron	30.0%
!	TTGAGAGTATAAATGGAGAA+AGG	+	chr5.2:79875812-79875831	None:intergenic	30.0%
!	TTTGAAGTTGTACACATAGT+AGG	-	chr5.2:79875018-79875037	MS.gene81384:intron	30.0%
!	TTTTCCATTGGAAATGCAAA+TGG	+	chr5.2:79877746-79877765	None:intergenic	30.0%
!	TTTTGACCGAAAATATGGAA+AGG	-	chr5.2:79875742-79875761	MS.gene81384:intron	30.0%
!!	AATCCTGACTACATTGATTT+GGG	-	chr5.2:79876145-79876164	MS.gene81384:intron	30.0%
!!	CCTAATTGTTTTTCTTCTTC+CGG	-	chr5.2:79876746-79876765	MS.gene81384:CDS	30.0%
!!!	ACTAAGTTTTAGCTCTCTTA+CGG	+	chr5.2:79875123-79875142	None:intergenic	30.0%
	AAACCCAAAATGAGGTGAAA+TGG	+	chr5.2:79877034-79877053	None:intergenic	35.0%
	AAATGAGGTGAAATGGGAAA+AGG	+	chr5.2:79877027-79877046	None:intergenic	35.0%
	AAATGGCTTAAACCTTGTTG+AGG	+	chr5.2:79873557-79873576	None:intergenic	35.0%
	AAATTCAGGATTTGCATTGC+TGG	+	chr5.2:79873648-79873667	None:intergenic	35.0%
	AACCCAAAATGAGGTGAAAT+GGG	+	chr5.2:79877033-79877052	None:intergenic	35.0%
	AACTGGGAAGTTAGAATAAG+AGG	-	chr5.2:79875715-79875734	MS.gene81384:intron	35.0%
	AATGGCTTAAACCTTGTTGA+GGG	+	chr5.2:79873556-79873575	None:intergenic	35.0%
	ACTGTCTACTTAGAGATCTA+TGG	+	chr5.2:79876933-79876952	None:intergenic	35.0%
	AGAAGACAAAGGTTGTTGAA+AGG	-	chr5.2:79874746-79874765	MS.gene81384:intron	35.0%
	AGACAGTTCCTTCTATAACT+TGG	+	chr5.2:79875645-79875664	None:intergenic	35.0%
	AGAGGATCTTAACTCGAAAT+AGG	-	chr5.2:79876243-79876262	MS.gene81384:intron	35.0%
	AGAGTTGAGAGAAAAAACAG+AGG	+	chr5.2:79876048-79876067	None:intergenic	35.0%
	ATAACTGTATCCAGTACTCA+TGG	+	chr5.2:79876358-79876377	None:intergenic	35.0%
	ATAGGAGAAATAGGTGAGTT+AGG	-	chr5.2:79875773-79875792	MS.gene81384:intron	35.0%
	ATCTCTAAGTAGACAGTTGA+TGG	-	chr5.2:79876936-79876955	MS.gene81384:CDS	35.0%
	ATGCAGTTCCAAGAAGTTAT+GGG	-	chr5.2:79876905-79876924	MS.gene81384:CDS	35.0%
	CAAATCAATGTAGTCAGGAT+TGG	+	chr5.2:79876146-79876165	None:intergenic	35.0%
	CAACTAATTTCAGTGAATGG+TGG	-	chr5.2:79877562-79877581	MS.gene81384:CDS	35.0%
	CATTTGGATCATGTGAATAC+CGG	-	chr5.2:79873737-79873756	MS.gene81384:intron	35.0%
	CCGGAAGAAGAAAAACAATT+AGG	+	chr5.2:79876749-79876768	None:intergenic	35.0%
	CTGCAACTAATTTCAGTGAA+TGG	-	chr5.2:79877559-79877578	MS.gene81384:CDS	35.0%
	GAGGATCTTAACTCGAAATA+GGG	-	chr5.2:79876244-79876263	MS.gene81384:intron	35.0%
	TAATACTAGCAATGAGGATC+CGG	-	chr5.2:79873985-79874004	MS.gene81384:intron	35.0%
	TATGCAGTTCCAAGAAGTTA+TGG	-	chr5.2:79876904-79876923	MS.gene81384:CDS	35.0%
	TCAAGTTCCATCTTCCTATT+GGG	-	chr5.2:79873610-79873629	MS.gene81384:intron	35.0%
	TCACTGAAATTAGTTGCAGA+TGG	+	chr5.2:79877558-79877577	None:intergenic	35.0%
	TCGATATTTGCAAAGTGATG+TGG	+	chr5.2:79876686-79876705	None:intergenic	35.0%
	TGCAGATCATTTCAATTTCC+AGG	-	chr5.2:79877173-79877192	MS.gene81384:CDS	35.0%
	TTCAAAAAATGGAGTGCAAG+AGG	+	chr5.2:79875004-79875023	None:intergenic	35.0%
	TTGGGTATGTTGAAGATGTT+AGG	-	chr5.2:79874593-79874612	MS.gene81384:intron	35.0%
	TTGGTGGAAAAGCTACAAAA+AGG	-	chr5.2:79873819-79873838	MS.gene81384:intron	35.0%
!	CAATCCTGACTACATTGATT+TGG	-	chr5.2:79876144-79876163	MS.gene81384:intron	35.0%
!	GTAATTTTATGCAGCAACGA+AGG	-	chr5.2:79877701-79877720	MS.gene81384:CDS	35.0%
!	GTGAGAATGATTTTGGACAA+GGG	-	chr5.2:79874673-79874692	MS.gene81384:intron	35.0%
!	TGTGAGAATGATTTTGGACA+AGG	-	chr5.2:79874672-79874691	MS.gene81384:intron	35.0%
!	TTCAAGTTCCATCTTCCTAT+TGG	-	chr5.2:79873609-79873628	MS.gene81384:intron	35.0%
!	TTCCCATTTCACCTCATTTT+GGG	-	chr5.2:79877028-79877047	MS.gene81384:CDS	35.0%
!	TTGCCTTTTGATAGGAAGAA+CGG	+	chr5.2:79877353-79877372	None:intergenic	35.0%
!	TTTCCCATTTCACCTCATTT+TGG	-	chr5.2:79877027-79877046	MS.gene81384:CDS	35.0%
!	TTTTTCTTTGCAGCGCATTT+GGG	-	chr5.2:79874575-79874594	MS.gene81384:intron	35.0%
!!	ACAAGGTTTAAGCCATTTTC+CGG	-	chr5.2:79873559-79873578	MS.gene81384:intron	35.0%
!!	GATGTTTCTGCTGTCAATTT+TGG	-	chr5.2:79873800-79873819	MS.gene81384:intron	35.0%
!!	TGAGTACTGGATACAGTTAT+TGG	-	chr5.2:79876358-79876377	MS.gene81384:CDS	35.0%
!!!	TTTTTTCTTTGCAGCGCATT+TGG	-	chr5.2:79874574-79874593	MS.gene81384:intron	35.0%
	AACAGAGGCAACTTCAAGAA+TGG	+	chr5.2:79875205-79875224	None:intergenic	40.0%
	AATCACAGAGGAAACCAGTA+AGG	+	chr5.2:79876833-79876852	None:intergenic	40.0%
	AATGGAGAAAGGAAATGGAG+AGG	+	chr5.2:79875801-79875820	None:intergenic	40.0%
	ACAAACGCAATTGCTGAGTT+TGG	-	chr5.2:79873709-79873728	MS.gene81384:intron	40.0%
	ACAGAGGCAACTTCAAGAAT+GGG	+	chr5.2:79875204-79875223	None:intergenic	40.0%
	ACGTAACACGATAGTAGGAT+TGG	+	chr5.2:79876083-79876102	None:intergenic	40.0%
	ACTTCGGTATGTATTTCAGG+AGG	-	chr5.2:79876627-79876646	MS.gene81384:CDS	40.0%
	AGACAATGGCGAACAAGAAA+TGG	-	chr5.2:79873412-79873431	MS.gene81384:intron	40.0%
	AGCAAAAACGAACCTGAGTA+AGG	+	chr5.2:79875958-79875977	None:intergenic	40.0%
	AGTAAAGGTTACTGTAGGCA+TGG	-	chr5.2:79873893-79873912	MS.gene81384:CDS	40.0%
	ATATGAGAGAAACTGTCGTG+AGG	+	chr5.2:79873950-79873969	None:intergenic	40.0%
	ATTGAGAAAGCCAATCACAG+AGG	+	chr5.2:79876845-79876864	None:intergenic	40.0%
	ATTGGGATCCTAAGTAGGAT+CGG	+	chr5.2:79876128-79876147	None:intergenic	40.0%
	CAGTCCATTTGCATTTCCAA+TGG	-	chr5.2:79877739-79877758	MS.gene81384:CDS	40.0%
	CTATGGTTCCCATAACTTCT+TGG	+	chr5.2:79876916-79876935	None:intergenic	40.0%
	CTGAAATTAGTTGCAGATGG+CGG	+	chr5.2:79877555-79877574	None:intergenic	40.0%
	GACAGTTTCTCTCATATGCA+TGG	-	chr5.2:79873953-79873972	MS.gene81384:intron	40.0%
	GATGGAACTTGAAAGTTCAG+CGG	+	chr5.2:79873602-79873621	None:intergenic	40.0%
	GCCAGCAGAAAAGAATGTTT+GGG	-	chr5.2:79874623-79874642	MS.gene81384:intron	40.0%
	GCTGAGTTTGGAGAATCATT+TGG	-	chr5.2:79873721-79873740	MS.gene81384:intron	40.0%
	GGAAATCCTCATTATGTTCG+TGG	-	chr5.2:79874694-79874713	MS.gene81384:intron	40.0%
	GGAATCAGTGTCAGTATTCT+TGG	+	chr5.2:79877235-79877254	None:intergenic	40.0%
	GGAGATGATAGAAAATGGAG+AGG	-	chr5.2:79876225-79876244	MS.gene81384:intron	40.0%
	GGTACGAGATACATGTTCTA+TGG	+	chr5.2:79875474-79875493	None:intergenic	40.0%
	TAGCAATCGTACTGCATGTA+AGG	+	chr5.2:79877600-79877619	None:intergenic	40.0%
	TATCTATATATGGCACGCGT+TGG	-	chr5.2:79875045-79875064	MS.gene81384:intron	40.0%
	TCATTTCAATTTCCAGGCTG+CGG	-	chr5.2:79877179-79877198	MS.gene81384:CDS	40.0%
	TCCATAGGAAACCCAAAATG+AGG	+	chr5.2:79877042-79877061	None:intergenic	40.0%
	TGCCAGCAGAAAAGAATGTT+TGG	-	chr5.2:79874622-79874641	MS.gene81384:intron	40.0%
	TGTGCTTGTGAAACCTTACA+GGG	-	chr5.2:79874723-79874742	MS.gene81384:intron	40.0%
	TTTGCATTGCTGGTAGATTG+TGG	+	chr5.2:79873638-79873657	None:intergenic	40.0%
!	AACACGATAGTAGGATTGGT+AGG	+	chr5.2:79876079-79876098	None:intergenic	40.0%
!	AACATTCTTTTCTGCTGGCA+TGG	+	chr5.2:79874622-79874641	None:intergenic	40.0%
!	ACCCAAACATTCTTTTCTGC+TGG	+	chr5.2:79874627-79874646	None:intergenic	40.0%
!	CAATTTTCCTTTGGTGAGCT+AGG	-	chr5.2:79877318-79877337	MS.gene81384:CDS	40.0%
!	CTCTGTTTCTCGTGATGAAT+CGG	-	chr5.2:79875218-79875237	MS.gene81384:intron	40.0%
!	GGCTGTATAGTGCTGTTAAA+TGG	-	chr5.2:79877431-79877450	MS.gene81384:CDS	40.0%
!	GTTTCTGCTGTCAATTTTGG+TGG	-	chr5.2:79873803-79873822	MS.gene81384:intron	40.0%
!!	AAAAAGGTACTGCAAGCACA+TGG	-	chr5.2:79874124-79874143	MS.gene81384:CDS	40.0%
!!	AATACTGACACTGATTCCTC+TGG	-	chr5.2:79877237-79877256	MS.gene81384:CDS	40.0%
!!	ATTCCTCGGTGTTTATTCTC+TGG	-	chr5.2:79874966-79874985	MS.gene81384:intron	40.0%
!!	TGGAAATGCAAATGGACTGT+CGG	+	chr5.2:79877738-79877757	None:intergenic	40.0%
!!	TTACTGGTTTCCTCTGTGAT+TGG	-	chr5.2:79876832-79876851	MS.gene81384:intron	40.0%
!!!	ACCTCATTTTGGGTTTCCTA+TGG	-	chr5.2:79877038-79877057	MS.gene81384:CDS	40.0%
!!!	GAGCTTTTAAAGCAGAGAAG+AGG	-	chr5.2:79874052-79874071	MS.gene81384:CDS	40.0%
	AAAGGTTACTGTAGGCATGG+AGG	-	chr5.2:79873896-79873915	MS.gene81384:intron	45.0%
	ACCTTACAGGGAGAAGACAA+AGG	-	chr5.2:79874735-79874754	MS.gene81384:intron	45.0%
	ACCTTTGTCTTCTCCCTGTA+AGG	+	chr5.2:79874739-79874758	None:intergenic	45.0%
	ACGGAGATAATGCCGGAAAA+TGG	+	chr5.2:79873574-79873593	None:intergenic	45.0%
	ATGGCGAACAAGAAATGGCT+AGG	-	chr5.2:79873417-79873436	MS.gene81384:intron	45.0%
	CATCGGTGAAGTCGTCTTTA+AGG	-	chr5.2:79873463-79873482	MS.gene81384:intron	45.0%
	CCTAATGTCAACCCTCAACA+AGG	-	chr5.2:79873542-79873561	MS.gene81384:intron	45.0%
	CCTTGTTGAGGGTTGACATT+AGG	+	chr5.2:79873545-79873564	None:intergenic	45.0%
	CGAACAAGAAATGGCTAGGT+TGG	-	chr5.2:79873421-79873440	MS.gene81384:intron	45.0%
	CGATTCATCACGAGAAACAG+AGG	+	chr5.2:79875220-79875239	None:intergenic	45.0%
	CTATAAGCCTAGCTCACCAA+AGG	+	chr5.2:79877328-79877347	None:intergenic	45.0%
	GAACCAGAGAATAAACACCG+AGG	+	chr5.2:79874972-79874991	None:intergenic	45.0%
	GAGCCCAAATCAATGTAGTC+AGG	+	chr5.2:79876151-79876170	None:intergenic	45.0%
	GAGGAACGTAACACGATAGT+AGG	+	chr5.2:79876088-79876107	None:intergenic	45.0%
	GCACCGTTCTTCCTATCAAA+AGG	-	chr5.2:79877347-79877366	MS.gene81384:CDS	45.0%
	GCCATTGTAGTCAGGATTGA+GGG	-	chr5.2:79875877-79875896	MS.gene81384:intron	45.0%
	GGTAGATTGTGGATCCCAAT+AGG	+	chr5.2:79873627-79873646	None:intergenic	45.0%
	GTGAAATGGGAAAAGGTCGT+CGG	+	chr5.2:79877020-79877039	None:intergenic	45.0%
	GTGTGCTTGTGAAACCTTAC+AGG	-	chr5.2:79874722-79874741	MS.gene81384:intron	45.0%
	TATGGACAATGGAACAGGTG+CGG	+	chr5.2:79875496-79875515	None:intergenic	45.0%
	TCAGGATTGGGATCCTAAGT+AGG	+	chr5.2:79876133-79876152	None:intergenic	45.0%
	TCGCGCGACTCAATAGTATT+CGG	-	chr5.2:79874203-79874222	MS.gene81384:intron	45.0%
	TCTTGTCCTGACCACATCAT+CGG	-	chr5.2:79873446-79873465	MS.gene81384:intron	45.0%
	TGAAAGTTCAGCGGTGAAGA+CGG	+	chr5.2:79873593-79873612	None:intergenic	45.0%
	TGAAATGGGAAAAGGTCGTC+GGG	+	chr5.2:79877019-79877038	None:intergenic	45.0%
	TGACAGCACTTTCACTGAAG+AGG	-	chr5.2:79874441-79874460	MS.gene81384:intron	45.0%
	TGTATACCTATTCCCTCCAG+AGG	+	chr5.2:79877256-79877275	None:intergenic	45.0%
	TGTGGATCCCAATAGGAAGA+TGG	+	chr5.2:79873620-79873639	None:intergenic	45.0%
	TGTTGAGGGTTGACATTAGG+TGG	+	chr5.2:79873542-79873561	None:intergenic	45.0%
!	CAGAGTGCTCCATTCTATCA+TGG	+	chr5.2:79876655-79876674	None:intergenic	45.0%
!	GTTTGAAGGGTATGGCATCT+TGG	-	chr5.2:79876419-79876438	MS.gene81384:CDS	45.0%
!	TGATTTGGGCCATTGTAGTC+AGG	-	chr5.2:79875869-79875888	MS.gene81384:intron	45.0%
!	TGGTTGATTTACAGGCCTCA+CGG	-	chr5.2:79874313-79874332	MS.gene81384:intron	45.0%
!!	CAGGAGGTACCATGATAGAA+TGG	-	chr5.2:79876643-79876662	MS.gene81384:CDS	45.0%
!!	GAAATGCAAATGGACTGTCG+GGG	+	chr5.2:79877736-79877755	None:intergenic	45.0%
!!	GGAAATGCAAATGGACTGTC+GGG	+	chr5.2:79877737-79877756	None:intergenic	45.0%
!!	TTGACATTAGGTGGCGGAAT+TGG	+	chr5.2:79873533-79873552	None:intergenic	45.0%
	AACAGCAAGACCTCGAGTTC+CGG	+	chr5.2:79873759-79873778	None:intergenic	50.0%
	ACCTGAGTAAGGTCGAAGCA+CGG	+	chr5.2:79875947-79875966	None:intergenic	50.0%
	ACTTCACCGATGATGTGGTC+AGG	+	chr5.2:79873455-79873474	None:intergenic	50.0%
	AGACGACTTCACCGATGATG+TGG	+	chr5.2:79873460-79873479	None:intergenic	50.0%
	AGGATCCGGTGATTTCACCA+GGG	-	chr5.2:79873999-79874018	MS.gene81384:intron	50.0%
	AGTGACCCTGGTGAAATCAC+CGG	+	chr5.2:79874007-79874026	None:intergenic	50.0%
	ATGGACAATGGAACAGGTGC+GGG	+	chr5.2:79875495-79875514	None:intergenic	50.0%
	CATGTGAATACCGGAACTCG+AGG	-	chr5.2:79873746-79873765	MS.gene81384:intron	50.0%
	CGAGAGCCACGAACATAATG+AGG	+	chr5.2:79874703-79874722	None:intergenic	50.0%
	GATGCGTTGAGAGTTCCAGA+TGG	-	chr5.2:79877060-79877079	MS.gene81384:CDS	50.0%
	GCCCTCAATCCTGACTACAA+TGG	+	chr5.2:79875881-79875900	None:intergenic	50.0%
	GGAACTCTCAACGCATCCAT+AGG	+	chr5.2:79877057-79877076	None:intergenic	50.0%
	GGCAGCGAAGCAATTGACAT+TGG	+	chr5.2:79874082-79874101	None:intergenic	50.0%
	GGCCATTGTAGTCAGGATTG+AGG	-	chr5.2:79875876-79875895	MS.gene81384:intron	50.0%
	GGTGAAGACGGAGATAATGC+CGG	+	chr5.2:79873581-79873600	None:intergenic	50.0%
	TCTATCTGAGCTAGTGACCC+TGG	+	chr5.2:79874019-79874038	None:intergenic	50.0%
	TGAGGGTTGACATTAGGTGG+CGG	+	chr5.2:79873539-79873558	None:intergenic	50.0%
	TTAACTGAGAGCCAGCGACA+TGG	-	chr5.2:79874151-79874170	MS.gene81384:CDS	50.0%
	TTGTAGTCAGGATTGAGGGC+TGG	-	chr5.2:79875881-79875900	MS.gene81384:intron	50.0%
!	CTGATTCCTCTGGAGGGAAT+AGG	-	chr5.2:79877247-79877266	MS.gene81384:CDS	50.0%
!!	ACTGACACTGATTCCTCTGG+AGG	-	chr5.2:79877240-79877259	MS.gene81384:CDS	50.0%
!!	AGGATTGAGGGCTGGTTTGT+AGG	-	chr5.2:79875889-79875908	MS.gene81384:intron	50.0%
!!	CTGACACTGATTCCTCTGGA+GGG	-	chr5.2:79877241-79877260	MS.gene81384:CDS	50.0%
!!	TCAGTGAAAGTGCTGTCAGC+TGG	+	chr5.2:79874439-79874458	None:intergenic	50.0%
	ACCACTGCATGTTGTCCGTG+AGG	+	chr5.2:79874331-79874350	None:intergenic	55.0%
	ACCGTGCTTCGACCTTACTC+AGG	-	chr5.2:79875943-79875962	MS.gene81384:intron	55.0%
	AGCCAGACTTACCATGTCGC+TGG	+	chr5.2:79874165-79874184	None:intergenic	55.0%
	AGCCAGCGACATGGTAAGTC+TGG	-	chr5.2:79874160-79874179	MS.gene81384:CDS	55.0%
	CGAGCTGACCGATCCTACTT+AGG	-	chr5.2:79876117-79876136	MS.gene81384:intron	55.0%
	CGGACAACATGCAGTGGTTC+TGG	-	chr5.2:79874333-79874352	MS.gene81384:intron	55.0%
	GAGGATCCGGTGATTTCACC+AGG	-	chr5.2:79873998-79874017	MS.gene81384:intron	55.0%
	GATTTAGAGGTTCCGCAGCC+TGG	+	chr5.2:79877194-79877213	None:intergenic	55.0%
	GGTCAGCTCGTGAAAACACG+AGG	+	chr5.2:79876107-79876126	None:intergenic	55.0%
	GTAAGGTCGAAGCACGGTTG+AGG	+	chr5.2:79875941-79875960	None:intergenic	55.0%
	GTCAATTGCTTCGCTGCCGA+TGG	-	chr5.2:79874084-79874103	MS.gene81384:CDS	55.0%
	TCGTACGATCCTACGTCCCA+TGG	-	chr5.2:79875913-79875932	MS.gene81384:intron	55.0%
!	AAGCACGGTTGAGGTGCCAT+GGG	+	chr5.2:79875932-79875951	None:intergenic	55.0%
!!	AGGTGGCGGAATTGGCATCA+TGG	+	chr5.2:79873525-79873544	None:intergenic	55.0%
	GCCTCACGGACAACATGCAG+TGG	-	chr5.2:79874327-79874346	MS.gene81384:intron	60.0%
!	GAAGCACGGTTGAGGTGCCA+TGG	+	chr5.2:79875933-79875952	None:intergenic	60.0%
!	GTTGAGGTGCCATGGGACGT+AGG	+	chr5.2:79875925-79875944	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	79873317	79877775	79873317	ID=MS.gene81384
chr5.2	mRNA	79873317	79877775	79873317	ID=MS.gene81384.t1;Parent=MS.gene81384
chr5.2	exon	79876856	79877775	79876856	ID=MS.gene81384.t1.exon1;Parent=MS.gene81384.t1
chr5.2	CDS	79876856	79877775	79876856	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79876610	79876765	79876610	ID=MS.gene81384.t1.exon2;Parent=MS.gene81384.t1
chr5.2	CDS	79876610	79876765	79876610	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79876325	79876504	79876325	ID=MS.gene81384.t1.exon3;Parent=MS.gene81384.t1
chr5.2	CDS	79876325	79876504	79876325	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79874370	79874446	79874370	ID=MS.gene81384.t1.exon4;Parent=MS.gene81384.t1
chr5.2	CDS	79874370	79874446	79874370	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79874011	79874181	79874011	ID=MS.gene81384.t1.exon5;Parent=MS.gene81384.t1
chr5.2	CDS	79874011	79874181	79874011	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79873824	79873914	79873824	ID=MS.gene81384.t1.exon6;Parent=MS.gene81384.t1
chr5.2	CDS	79873824	79873914	79873824	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1
chr5.2	exon	79873317	79873377	79873317	ID=MS.gene81384.t1.exon7;Parent=MS.gene81384.t1
chr5.2	CDS	79873317	79873377	79873317	ID=cds.MS.gene81384.t1;Parent=MS.gene81384.t1

Gene Sequence

>MS.gene81384

ATGGATATATCAGAGTACACAAGAATTGTGTTTGATAAAATTCAGAAATTTGAGCCTGAAAATGCTAGAAAGATTATTGGCTATCTTCTTTTACAAGACAATGGCGAACAAGAAATGGCTAGGTTGGCTTCTTGTCCTGACCACATCATCGGTGAAGTCGTCTTTAAGGCCAAAACTGATCTTCAAATAATGGCTGTTAATTCAACCATGATGCCAATTCCGCCACCTAATGTCAACCCTCAACAAGGTTTAAGCCATTTTCCGGCATTATCTCCGTCTTCACCGCTGAACTTTCAAGTTCCATCTTCCTATTGGGATCCACAATCTACCAGCAATGCAAATCCTGAATTTACGGGAATGAATTACATGGATTCTATTCTAGAACTTCAAAAACAAACGCAATTGCTGAGTTTGGAGAATCATTTGGATCATGTGAATACCGGAACTCGAGGTCTTGCTGTTAATGATTACAACAATGGCTTAGATGTTTCTGCTGTCAATTTTGGTGGAAAAGCTACAAAAAGGTTTTCAAATTCAAACATGTCTGAATTTCCACTCAAGATCTGTCATTATTTCAGTAAAGGTTACTGTAGGCATGGAGGTAACTGTAGATATTTTCATGGTCAAGTTCCTCACGACAGTTTCTCTCATATGCATGGAAATAATGATAATACTAGCAATGAGGATCCGGTGATTTCACCAGGGTCACTAGCTCAGATAGAGTCTGAAATTATTGAGCTTTTAAAGCAGAGAAGAGGAAATCCAATGTCAATTGCTTCGCTGCCGATGGCATACTATGATAAATATAAAAAGGTACTGCAAGCACATGGTTATTTAACTGAGAGCCAGCGACATGGTAAGTCTGGCTATAGTTTGACAAAGCTTCTCGCGCGACTCAATAGTATTCGGCTAATTGATAGGTGAAATTTATAAGTCTTATGTATCTTTATATGTGTAAGTATTCAAATGTCTCTTGCTCTAGTTTGAAATTTGTTATGGTTGATTTACAGGCCTCACGGACAACATGCAGTGGTTCTGGCTGAAGATGCTCCAAAATACATTCAAAAGGGAGATTCTGTTCAAAATATCAGTGCATCGCGACAGATATATTTGACTTTTCCAGCTGACAGCACTTTCACTGAAGAGGATGTCGCAGAATACTTCAAGTAAATTATTACATTTTTTGGCGTACCTATACTTATTGACACTTGTTTGTTGCAGCTAATTATACGTATTAGTAAATTTGGTTTTACATACTTTTTTCTTTGCAGCGCATTTGGGTATGTTGAAGATGTTAGGATTCCATGCCAGCAGAAAAGAATGTTTGGGTTTGTAACATTTGCTGATCCTGAAACTGTGAGAATGATTTTGGACAAGGGAAATCCTCATTATGTTCGTGGCTCTCGTGTGCTTGTGAAACCTTACAGGGAGAAGACAAAGGTTGTTGAAAGGTTAGAATTCCTTGTCTTTTCTTTTTGATAATAAAGGTTTTCTTTTCTAGTTTTATGACTTCAAATTCTCATTTAATCTTGTAATTATAATTATTTACTGTTCATGTTGCAAAATGAAAATTTATGCTTCTGATTTAAATGGGAAATGTCTGTATTGCTGTCTATATTGTCAATAGTTTTCTAGTATGATGAATGCTTATTCCTCGGTGTTTATTCTCTGGTTCTTAGTTCATCCTCTTGCACTCCATTTTTTGAAGTTGTACACATAGTAGGCACATATCTATATATGGCACGCGTTGGCAACACACAACATATGTATCAAAATTATTTTTCAAAAAATGTTTAAGCTCAGCCGTAAGAGAGCTAAAACTTAGTTTTTAGTTTTTTACACATACAAATTGTCATCTCGTCTAAAAAAATGTTTGAAGGGACTCCCATTCTTGAAGTTGCCTCTGTTTCTCGTGATGAATCGGAGTCTATTCTTTTCATTGATTATTGACAAAGGGGATGATAATATTGTCACTGTTCATAGTCATTTTTCATAGTCATGTTTAGGTTTTATGATGTTGGTTGTTGAATGATTTATATATTATAGTTCCTTATTTATGGTCACTGTTATATGATGTTAGCTTGTTTTTGCAAAATTCTGTTTTTCACGTATGTTTAGTTTTCGAAAATTATATTAACATACGTAGAGTCTAGACCATAGAACATGTATCTCGTACCCGCACCTGTTCCATTGTCCATAATTTATGCTTGTAAAGTTATGGTATCTTGGTCACTAAGCGTCTGCGACACATGTATGCAAAACAGTTTTGCATTGAAAAGTAAGGTATGCGTACACAAAAAAAAAAAAATTCCTATAGAAATACGACCAAGTTATAGAAGGAACTGTCTTTTCTAATTAATTGCAACGCAAATCAGAACAGAACTCCAAAATATAAGAAAACTGGGAAGTTAGAATAAGAGGATATTTTTGACCGAAAATATGGAAAGGTTACTTGTATAGGAGAAATAGGTGAGTTAGGATCCTCTCCATTTCCTTTCTCCATTTATACTCTCAATTACTATAGTTTTTAAATGTTGTGAGGTGTATAAAAATGATTTGGGCCATTGTAGTCAGGATTGAGGGCTGGTTTGTAGGATCGTACGATCCTACGTCCCATGGCACCTCAACCGTGCTTCGACCTTACTCAGGTTCGTTTTTGCTTTGTTTTCCTATGTTTGTTCTGTTTTTTGCTGTTTTTCCTCTGTTTTCTCTGTTTTTTTGCTTGTTTCCTCTGTTTTTTCTCTCAACTCTATCATCAACCTACCAATCCTACTATCGTGTTACGTTCCTCGTGTTTTCACGAGCTGACCGATCCTACTTAGGATCCCAATCCTGACTACATTGATTTGGGCTCATTTAATTCATACTTTTGTATTTATATTTCGAGAACTATAGTAATGGAGCAAATGGAGATGATAGAAAATGGAGAGGATCTTAACTCGAAATAGGGAAAGAGTGTACATTGTATGTAATAAGGGAATTTTTTAAAATATTTTACTAATCGACTAAAGCATTTTTTAAATATTGTATTTATGTTTCCATGAGTACTGGATACAGTTATTGGTATGTTGACTTCAGAGCTACACAACATAAATTATACAAGTTTGAAGGGTATGGCATCTTGGTTTATTTAACATCACAAAGGCTTAAACCTAAAATATGCAAAGTTATGATTATTTAAAAATCAAAAACTAGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACTGACAAAAAAAATATTTTGGTTCCTATGATGAATGTTTTCTTTAATAATTATTAACTTCGGTATGTATTTCAGGAGGTACCATGATAGAATGGAGCACTCTGCTTGCTGTCCACATCACTTTGCAAATATCGACTCTGAACTTGACTCAAGTATGATTTAATCTAGTTTATAACCTAATTGTTTTTCTTCTTCCGGTTCACAATGTAGAACAATTCATAGCTTTCCTCTGTGATTAGATTCTATAAAAAACAAAAAACCTTACTGGTTTCCTCTGTGATTGGCTTTCTCAATCAAGTTATATAATTATTTTGAATTTCGCTTTTTGTGATATATGCAGTTCCAAGAAGTTATGGGAACCATAGATCTCTAAGTAGACAGTTGATGGAAGAGCATGAACAAGCTTTTGAATTGCAAAGGAGACGTCTTGCGCAGCTGCAATTTACCCGACGACCTTTTCCCATTTCACCTCATTTTGGGTTTCCTATGGATGCGTTGAGAGTTCCAGATGGTATGTTTTAATGTAGATTTCAATTTTGCTTATAATTTTTATACATGTGTTACTCATCCTTCATTGTTATGCTAATTGAAATAGTTTCTCATGCAGATCATTTCAATTTCCAGGCTGCGGAACCTCTAAATCATGCGTTGAATAACAACACCAAGAATACTGACACTGATTCCTCTGGAGGGAATAGGTATACATTAATTTCTACTGAATTTATTACTCCCATTTTAGTACTAAAACAATTTTCCTTTGGTGAGCTAGGCTTATAGCACCGTTCTTCCTATCAAAAGGCAAATTTGATATACTCTAAAATTTTCTTTTGTTTGTTCACAATTTCACTAGAGGCTAAAATGGCTGTATAGTGCTGTTAAATGGCCGAATTTGAATCTATTGTTCTGCAATATGGTATTGGTTCAAAATTGGGAAATAGTAGCACTGTTGCATAACAGAATTTGAACAAACAACTTTTTTTTCCGCCATCTGCAACTAATTTCAGTGAATGGTGGCGTTGTTTGTCTCCTTACATGCAGTACGATTGCTACACCTTTCTTGACATAAATCATATTTTGTTAACTATGATGATGACGATAATATTTATTTATTTCTTTATATATTTATGTTTGTAATTTTATGCAGCAACGAAGGACTCAATCTCCCCGACAGTCCATTTGCATTTCCAATGGAAAATGATAAATAG

Protein sequence

>MS.gene81384.t1

MDISEYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKAKTDLQIMAVNSTMMPIPPPNVNPQQGLSHFPALSPSSPLNFQVPSSYWDPQSTSNANPEFTGMNYMDSILELQKQTQLLSLENHLDHVNTGTRGLAVNDYNNGLDVSAVNFGGKATKRFSNSNMSEFPLKICHYFSKGYCRHGGNCRYFHGQVPHDSFSHMHGNNDNTSNEDPVISPGSLAQIESEIIELLKQRRGNPMSIASLPMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARLNSIRLIDRPHGQHAVVLAEDAPKYIQKGDSVQNISASRQIYLTFPADSTFTEEDVAEYFNAFGYVEDVRIPCQQKRMFGFVTFADPETVRMILDKGNPHYVRGSRVLVKPYREKTKVVERRYHDRMEHSACCPHHFANIDSELDSIPRSYGNHRSLSRQLMEEHEQAFELQRRRLAQLQFTRRPFPISPHFGFPMDALRVPDDHFNFQAAEPLNHALNNNTKNTDTDSSGGNSNEGLNLPDSPFAFPMENDK