Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82421.t1 | GAY33737.1 | 82.7 | 214 | 34 | 1 | 4 | 214 | 2 | 215 | 5.40E-96 | 360.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82421.t1 | Q9ZTW3 | 80.1 | 171 | 34 | 0 | 5 | 175 | 3 | 173 | 4.0e-76 | 285.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82421.t1 | A0A2H5N1D7 | 82.7 | 214 | 34 | 1 | 4 | 214 | 2 | 215 | 3.9e-96 | 360.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene82421 | -0.818758 | 1.66E-52 | -1.69E-46 |
| MS.gene049411 | MS.gene82421 | 0.872239 | 3.70E-67 | -1.69E-46 |
| MS.gene049680 | MS.gene82421 | 0.807075 | 6.03E-50 | -1.69E-46 |
| MS.gene05011 | MS.gene82421 | 0.801783 | 7.65E-49 | -1.69E-46 |
| MS.gene05029 | MS.gene82421 | 0.802308 | 5.97E-49 | -1.69E-46 |
| MS.gene050437 | MS.gene82421 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene82421 | 0.819692 | 1.02E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene82421 | 0.804738 | 1.87E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene82421 | 0.8813 | 2.69E-70 | -1.69E-46 |
| MS.gene050945 | MS.gene82421 | 0.816711 | 4.80E-52 | -1.69E-46 |
| MS.gene050955 | MS.gene82421 | 0.857421 | 1.65E-62 | -1.69E-46 |
| MS.gene051003 | MS.gene82421 | 0.850195 | 1.99E-60 | -1.69E-46 |
| MS.gene051234 | MS.gene82421 | 0.853781 | 1.90E-61 | -1.69E-46 |
| MS.gene051343 | MS.gene82421 | 0.821107 | 4.81E-53 | -1.69E-46 |
| MS.gene051642 | MS.gene82421 | 0.813789 | 2.14E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene82421 | 0.813162 | 2.94E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene82421 | 0.862023 | 6.80E-64 | -1.69E-46 |
| MS.gene052296 | MS.gene82421 | 0.812337 | 4.46E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene82421 | 0.80032 | 1.52E-48 | -1.69E-46 |
| MS.gene053879 | MS.gene82421 | 0.825292 | 5.08E-54 | -1.69E-46 |
| MS.gene054004 | MS.gene82421 | 0.838628 | 2.57E-57 | -1.69E-46 |
| MS.gene054005 | MS.gene82421 | 0.80886 | 2.52E-50 | -1.69E-46 |
| MS.gene054403 | MS.gene82421 | 0.881478 | 2.32E-70 | -1.69E-46 |
| MS.gene054413 | MS.gene82421 | 0.818594 | 1.81E-52 | -1.69E-46 |
| MS.gene05469 | MS.gene82421 | 0.822883 | 1.87E-53 | -1.69E-46 |
| MS.gene055765 | MS.gene82421 | 0.815734 | 7.94E-52 | -1.69E-46 |
| MS.gene056693 | MS.gene82421 | 0.813879 | 2.05E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene82421 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene82421 | 0.814296 | 1.66E-51 | -1.69E-46 |
| MS.gene057705 | MS.gene82421 | 0.808088 | 3.68E-50 | -1.69E-46 |
| MS.gene05781 | MS.gene82421 | 0.804545 | 2.05E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene82421 | 0.817319 | 3.51E-52 | -1.69E-46 |
| MS.gene058149 | MS.gene82421 | 0.804493 | 2.10E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene82421 | 0.861428 | 1.03E-63 | -1.69E-46 |
| MS.gene059227 | MS.gene82421 | 0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene059802 | MS.gene82421 | 0.868884 | 4.68E-66 | -1.69E-46 |
| MS.gene06011 | MS.gene82421 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene82421 | 0.809994 | 1.44E-50 | -1.69E-46 |
| MS.gene060763 | MS.gene82421 | 0.838153 | 3.41E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene82421 | 0.806949 | 6.42E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene82421 | 0.807414 | 5.11E-50 | -1.69E-46 |
| MS.gene061243 | MS.gene82421 | 0.802634 | 5.11E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82421.t1 | MTR_4g083490 | 100.000 | 175 | 0 | 0 | 1 | 175 | 1 | 175 | 1.54e-130 | 366 |
| MS.gene82421.t1 | MTR_2g028790 | 90.751 | 173 | 16 | 0 | 3 | 175 | 5 | 177 | 1.74e-119 | 338 |
| MS.gene82421.t1 | MTR_4g022570 | 73.057 | 193 | 48 | 1 | 5 | 197 | 3 | 191 | 2.99e-106 | 305 |
| MS.gene82421.t1 | MTR_1g047720 | 75.543 | 184 | 41 | 1 | 5 | 188 | 3 | 182 | 1.45e-105 | 303 |
| MS.gene82421.t1 | MTR_7g058900 | 75.275 | 182 | 39 | 1 | 5 | 180 | 3 | 184 | 2.17e-101 | 293 |
| MS.gene82421.t1 | MTR_7g058640 | 68.421 | 171 | 54 | 0 | 5 | 175 | 3 | 173 | 4.07e-88 | 259 |
| MS.gene82421.t1 | MTR_2g436870 | 61.340 | 194 | 71 | 1 | 4 | 197 | 2 | 191 | 6.20e-88 | 259 |
| MS.gene82421.t1 | MTR_7g058640 | 67.836 | 171 | 55 | 0 | 5 | 175 | 3 | 173 | 1.66e-87 | 256 |
| MS.gene82421.t1 | MTR_1g111890 | 53.991 | 213 | 76 | 3 | 4 | 194 | 2 | 214 | 2.68e-81 | 243 |
| MS.gene82421.t1 | MTR_1g047710 | 74.167 | 120 | 27 | 1 | 66 | 185 | 12 | 127 | 1.96e-61 | 188 |
| MS.gene82421.t1 | MTR_4g022470 | 79.439 | 107 | 22 | 0 | 66 | 172 | 10 | 116 | 9.73e-59 | 181 |
| MS.gene82421.t1 | MTR_7g058640 | 71.579 | 95 | 27 | 0 | 81 | 175 | 1 | 95 | 1.11e-45 | 148 |
| MS.gene82421.t1 | MTR_5g089370 | 39.759 | 166 | 97 | 3 | 8 | 172 | 3 | 166 | 9.09e-38 | 131 |
| MS.gene82421.t1 | MTR_4g052550 | 35.119 | 168 | 104 | 4 | 7 | 172 | 2 | 166 | 1.22e-35 | 125 |
| MS.gene82421.t1 | MTR_4g115390 | 32.941 | 170 | 107 | 3 | 8 | 172 | 3 | 170 | 4.99e-29 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82421.t1 | AT1G04760 | 74.611 | 193 | 45 | 1 | 5 | 197 | 3 | 191 | 2.93e-106 | 305 |
| MS.gene82421.t1 | AT1G04760 | 74.611 | 193 | 45 | 1 | 5 | 197 | 3 | 191 | 2.93e-106 | 305 |
| MS.gene82421.t1 | AT2G33120 | 77.717 | 184 | 37 | 1 | 5 | 188 | 3 | 182 | 1.13e-105 | 303 |
| MS.gene82421.t1 | AT2G32670 | 74.093 | 193 | 46 | 1 | 5 | 197 | 68 | 256 | 3.16e-105 | 305 |
| MS.gene82421.t1 | AT1G04750 | 76.087 | 184 | 40 | 1 | 5 | 188 | 3 | 182 | 1.26e-103 | 298 |
| MS.gene82421.t1 | AT2G33120 | 73.958 | 192 | 38 | 2 | 5 | 188 | 3 | 190 | 4.96e-102 | 295 |
| MS.gene82421.t1 | AT4G15780 | 68.023 | 172 | 54 | 1 | 5 | 175 | 3 | 174 | 7.72e-87 | 254 |
| MS.gene82421.t1 | AT2G33110 | 68.750 | 160 | 50 | 0 | 5 | 164 | 3 | 162 | 1.98e-81 | 241 |
| MS.gene82421.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene82421.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene82421.t1 | AT3G54300 | 59.896 | 192 | 56 | 2 | 4 | 175 | 2 | 192 | 2.81e-81 | 243 |
| MS.gene82421.t1 | AT2G33110 | 68.750 | 160 | 50 | 0 | 5 | 164 | 3 | 162 | 1.19e-80 | 240 |
| MS.gene82421.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene82421.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene82421.t1 | AT1G04750 | 84.211 | 95 | 15 | 0 | 81 | 175 | 1 | 95 | 2.74e-53 | 168 |
| MS.gene82421.t1 | AT5G11150 | 42.262 | 168 | 93 | 3 | 7 | 172 | 2 | 167 | 1.10e-40 | 138 |
| MS.gene82421.t1 | AT5G11150 | 42.262 | 168 | 93 | 3 | 7 | 172 | 2 | 167 | 2.36e-40 | 138 |
| MS.gene82421.t1 | AT4G32150 | 41.317 | 167 | 95 | 3 | 7 | 172 | 2 | 166 | 4.23e-40 | 137 |
| MS.gene82421.t1 | AT5G22360 | 36.686 | 169 | 101 | 4 | 7 | 172 | 2 | 167 | 3.99e-35 | 124 |
| MS.gene82421.t1 | AT2G25340 | 37.725 | 167 | 101 | 3 | 7 | 172 | 2 | 166 | 5.17e-35 | 124 |
| MS.gene82421.t1 | AT2G33120 | 67.188 | 64 | 17 | 1 | 125 | 188 | 41 | 100 | 5.81e-19 | 80.1 |
| MS.gene82421.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene82421.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene82421.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene82421.t1 | AT3G24890 | 60.000 | 55 | 22 | 0 | 112 | 166 | 11 | 65 | 4.95e-16 | 70.5 |
| MS.gene82421.t1 | AT3G24890 | 63.462 | 52 | 19 | 0 | 115 | 166 | 14 | 65 | 6.88e-16 | 71.6 |
Find 51 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATATGTTCCTTCAATTT+TGG | 0.127814 | 4.2:-25985784 | None:intergenic |
| AACAGCTTGAATAAGGAATT+TGG | 0.135464 | 4.2:+25985672 | MS.gene82421:CDS |
| TTCAATTACCTCGTCGATAA+TGG | 0.314519 | 4.2:+25985248 | MS.gene82421:CDS |
| TGCACCTAACAGCTTGAATA+AGG | 0.338054 | 4.2:+25985665 | MS.gene82421:CDS |
| TGAGGCAGGCACAAGACTTC+AGG | 0.377030 | 4.2:+25990623 | MS.gene82421:intron |
| ACAGCTTGAATAAGGAATTT+GGG | 0.392757 | 4.2:+25985673 | MS.gene82421:CDS |
| GCAAGCTTACTCACCTCCTC+CGG | 0.394354 | 4.2:-25985823 | None:intergenic |
| GTTGAAGTTTCCGCTGAATT+CGG | 0.415620 | 4.2:-25985150 | None:intergenic |
| AATTCCTTATTCAAGCTGTT+AGG | 0.425518 | 4.2:-25985669 | None:intergenic |
| GAAGATAAAGCTGATTGTAT+TGG | 0.457650 | 4.2:+25990690 | MS.gene82421:CDS |
| TATTTATTCTTAAGAACGAT+TGG | 0.463535 | 4.2:-25990748 | None:intergenic |
| TTGTGGCAGGCCAAAATTGA+AGG | 0.466510 | 4.2:+25985774 | MS.gene82421:intron |
| ATTTATTCTTAAGAACGATT+GGG | 0.491549 | 4.2:-25990747 | None:intergenic |
| ACTTGATGTAGGTCCTGGAC+AGG | 0.498294 | 4.2:+25990303 | MS.gene82421:intron |
| AATTACTAACCTGGTGATGA+AGG | 0.503755 | 4.2:-25990364 | None:intergenic |
| CATGATGGAGAATATTGAAA+AGG | 0.507884 | 4.2:+25985882 | MS.gene82421:CDS |
| TTGTGTTGTTGCGGATGAAA+CGG | 0.512801 | 4.2:+25985557 | MS.gene82421:CDS |
| GCACAAGACTTCAGGAACTC+AGG | 0.526353 | 4.2:+25990631 | MS.gene82421:CDS |
| CTTGATGTAGGTCCTGGACA+GGG | 0.526403 | 4.2:+25990304 | MS.gene82421:intron |
| CGATTGGGAGGACAATTATG+AGG | 0.534617 | 4.2:-25990732 | None:intergenic |
| GCTTGCTAAGGTGAAGGCTC+AGG | 0.546240 | 4.2:+25985840 | MS.gene82421:CDS |
| CAAGCTTACTCACCTCCTCC+GGG | 0.549863 | 4.2:-25985822 | None:intergenic |
| GTGAATTTGTTGTTAGACGC+TGG | 0.551142 | 4.2:-25985203 | None:intergenic |
| AACGGTTGGAAGACAAGTGC+CGG | 0.560243 | 4.2:+25985575 | MS.gene82421:CDS |
| TTTGTTGCGAAATATGGTGG+TGG | 0.569761 | 4.2:+25985627 | MS.gene82421:CDS |
| CTGAAGGCATTGAAAAGCGA+TGG | 0.572755 | 4.2:-25985174 | None:intergenic |
| ATTATCGACGAGGTAATTGA+AGG | 0.574959 | 4.2:-25985246 | None:intergenic |
| AAATTCACTTACAATTGTGA+TGG | 0.582315 | 4.2:+25985218 | MS.gene82421:CDS |
| TGATGTAGGTCCTGGACAGG+GGG | 0.582640 | 4.2:+25990306 | MS.gene82421:intron |
| TTGTGTTGATCACCCGGAGG+AGG | 0.583937 | 4.2:+25985810 | MS.gene82421:CDS |
| CACAAGACTTCAGGAACTCA+GGG | 0.588787 | 4.2:+25990632 | MS.gene82421:CDS |
| GCAGTATTGTGTTGATCACC+CGG | 0.590880 | 4.2:+25985804 | MS.gene82421:CDS |
| TAGACGCTGGAAGCTTCTGA+AGG | 0.592334 | 4.2:-25985190 | None:intergenic |
| GACTGAGAACCTTCATCACC+AGG | 0.596496 | 4.2:+25990355 | MS.gene82421:CDS |
| GAGTAAGCTTGCTAAGGTGA+AGG | 0.597551 | 4.2:+25985834 | MS.gene82421:CDS |
| TTGATGTAGGTCCTGGACAG+GGG | 0.598139 | 4.2:+25990305 | MS.gene82421:intron |
| TTGTTGCGAAATATGGTGGT+GGG | 0.599780 | 4.2:+25985628 | MS.gene82421:CDS |
| TGAAGTGAAAGGTGTCATGA+TGG | 0.602006 | 4.2:+25985867 | MS.gene82421:CDS |
| GGAGGTGAGTAAGCTTGCTA+AGG | 0.602293 | 4.2:+25985828 | MS.gene82421:CDS |
| TATTCTTAAGAACGATTGGG+AGG | 0.607627 | 4.2:-25990744 | None:intergenic |
| GTTGTTGCGGATGAAACGGT+TGG | 0.620353 | 4.2:+25985561 | MS.gene82421:CDS |
| GCTCAGGTGTCTGAAGTGAA+AGG | 0.620623 | 4.2:+25985856 | MS.gene82421:CDS |
| TGTAGCGTATTGTGTTGTTG+CGG | 0.643271 | 4.2:+25985548 | MS.gene82421:intron |
| TGCGAAATATGGTGGTGGGA+AGG | 0.648574 | 4.2:+25985632 | MS.gene82421:CDS |
| TCTGAATACACCGAATTCAG+CGG | 0.660683 | 4.2:+25985140 | MS.gene82421:CDS |
| ATCTACGCTTTCGTTTCTCG+CGG | 0.661937 | 4.2:+25985104 | MS.gene82421:CDS |
| GGTTGGAAGACAAGTGCCGG+TGG | 0.663656 | 4.2:+25985578 | MS.gene82421:CDS |
| ACACGTTCCAGAAAAGCCAC+CGG | 0.669559 | 4.2:-25985594 | None:intergenic |
| GATGTAGGTCCTGGACAGGG+GGG | 0.679259 | 4.2:+25990307 | MS.gene82421:intron |
| AACTGTAGCCATTATCGACG+AGG | 0.726012 | 4.2:-25985256 | None:intergenic |
| GTATTGTGTTGATCACCCGG+AGG | 0.776651 | 4.2:+25985807 | MS.gene82421:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGTAAAAAATAATAACT+TGG | - | chr4.2:25987387-25987406 | None:intergenic | 10.0% |
| !! | AAAGTAAAAAATAATAACTT+GGG | - | chr4.2:25987386-25987405 | None:intergenic | 10.0% |
| !! | TAAAGTAATAAAAATAGTAA+CGG | - | chr4.2:25987823-25987842 | None:intergenic | 10.0% |
| !!! | ATTCTCTTTTTTTATTTATT+TGG | + | chr4.2:25988897-25988916 | MS.gene82421:intron | 10.0% |
| !!! | TTATTATTAAAAGTGATTTT+AGG | + | chr4.2:25985421-25985440 | MS.gene82421:intron | 10.0% |
| !!! | TTTTACAAAAATAGAAAATA+CGG | + | chr4.2:25986023-25986042 | MS.gene82421:intron | 10.0% |
| !! | AAAGTAATAAAAATAGTAAC+GGG | - | chr4.2:25987822-25987841 | None:intergenic | 15.0% |
| !! | AGTATATAACTTAATTGTTT+AGG | + | chr4.2:25989425-25989444 | MS.gene82421:intron | 15.0% |
| !! | TATAAAATGTCCTTTATTAA+TGG | - | chr4.2:25987924-25987943 | None:intergenic | 15.0% |
| !! | TTATTATATAAAATTGCACT+TGG | + | chr4.2:25987095-25987114 | MS.gene82421:intron | 15.0% |
| !!! | AAAAACATTCAAATTTTAGA+GGG | - | chr4.2:25986618-25986637 | None:intergenic | 15.0% |
| !!! | AAATGAACAAATTTTGATTT+TGG | - | chr4.2:25987038-25987057 | None:intergenic | 15.0% |
| !!! | AAATGATCAAATTTTGATTT+TGG | - | chr4.2:25986942-25986961 | None:intergenic | 15.0% |
| !!! | CATATTACTTTTTATGTTTT+TGG | + | chr4.2:25987178-25987197 | MS.gene82421:intron | 15.0% |
| !!! | CATTTTTTTATGATAAATGA+TGG | + | chr4.2:25990468-25990487 | MS.gene82421:intron | 15.0% |
| !!! | TTTCTACATAATTTAGTTTT+TGG | - | chr4.2:25990011-25990030 | None:intergenic | 15.0% |
| !! | AGCATAAAAAATTTCAAAAC+TGG | - | chr4.2:25988291-25988310 | None:intergenic | 20.0% |
| !! | GAGAAAATTATAGTAAAATG+AGG | - | chr4.2:25988700-25988719 | None:intergenic | 20.0% |
| !! | GCATTAATTTCATAAAATAC+TGG | - | chr4.2:25986136-25986155 | None:intergenic | 20.0% |
| !! | TACTGATATAACTAATTTCT+AGG | - | chr4.2:25985382-25985401 | None:intergenic | 20.0% |
| !! | TATAACTTAATTGTTTAGGT+TGG | + | chr4.2:25989429-25989448 | MS.gene82421:intron | 20.0% |
| !! | TATCTAAATTCTTACTCTTT+CGG | + | chr4.2:25986506-25986525 | MS.gene82421:intron | 20.0% |
| !! | TGTGATTTGATATTTAATTG+TGG | + | chr4.2:25985757-25985776 | MS.gene82421:intron | 20.0% |
| !! | TTAAATACAATAGTAATCGT+GGG | + | chr4.2:25987592-25987611 | MS.gene82421:intron | 20.0% |
| !! | TTAGAAAATATGGTTCAATA+AGG | + | chr4.2:25989696-25989715 | MS.gene82421:intron | 20.0% |
| !!! | AGATTTTATGGAAGTTTTTT+TGG | + | chr4.2:25989872-25989891 | MS.gene82421:intron | 20.0% |
| !!! | AGTTTTGAAATTTTTTATGC+TGG | + | chr4.2:25988290-25988309 | MS.gene82421:intron | 20.0% |
| !!! | ATCTCATTATTCTAAAACAA+GGG | + | chr4.2:25988561-25988580 | MS.gene82421:intron | 20.0% |
| !!! | ATTAAAAGTGATTTTAGGTT+AGG | + | chr4.2:25985426-25985445 | MS.gene82421:intron | 20.0% |
| !!! | CAAAAACATTCAAATTTTAG+AGG | - | chr4.2:25986619-25986638 | None:intergenic | 20.0% |
| !!! | CTCTAAAATTTGAATGTTTT+TGG | + | chr4.2:25986617-25986636 | MS.gene82421:intron | 20.0% |
| !!! | TAAGTTACTTTTGTTCTAAA+TGG | + | chr4.2:25989491-25989510 | MS.gene82421:intron | 20.0% |
| !!! | TAAGTTATATACTTTTTTCC+TGG | - | chr4.2:25989418-25989437 | None:intergenic | 20.0% |
| !!! | TGAGATTGATTTAGAAAATA+TGG | + | chr4.2:25989686-25989705 | MS.gene82421:intron | 20.0% |
| !!! | TTAAAAGTGATTTTAGGTTA+GGG | + | chr4.2:25985427-25985446 | MS.gene82421:intron | 20.0% |
| !!! | TTAAAGGAAAAGAATTTTCA+TGG | + | chr4.2:25986849-25986868 | MS.gene82421:intron | 20.0% |
| !!! | TTAGATCTAGATAGATTTTA+TGG | + | chr4.2:25989860-25989879 | MS.gene82421:intron | 20.0% |
| !!! | TTTTTAGTCATTGTAAAATG+AGG | + | chr4.2:25986571-25986590 | MS.gene82421:intron | 20.0% |
| ! | AAATTCACTTACAATTGTGA+TGG | + | chr4.2:25985218-25985237 | MS.gene82421:CDS | 25.0% |
| ! | AAGAAACTTTGATTGTTAGA+GGG | + | chr4.2:25986819-25986838 | MS.gene82421:intron | 25.0% |
| ! | AATGTCCTTTATTAATGGTA+TGG | - | chr4.2:25987919-25987938 | None:intergenic | 25.0% |
| ! | ATACACAATAAACCAAAAGA+TGG | - | chr4.2:25989540-25989559 | None:intergenic | 25.0% |
| ! | ATAGTTATTATGAGACAAAG+GGG | - | chr4.2:25987255-25987274 | None:intergenic | 25.0% |
| ! | ATGTTTGTTTCATGCAATAA+AGG | - | chr4.2:25989350-25989369 | None:intergenic | 25.0% |
| ! | ATTTGATATTTAATTGTGGC+AGG | + | chr4.2:25985761-25985780 | MS.gene82421:intron | 25.0% |
| ! | CAAAACTTTCAAAGTTTGAA+AGG | + | chr4.2:25986886-25986905 | MS.gene82421:intron | 25.0% |
| ! | CAAAAGCTGCAAATAAATAA+GGG | + | chr4.2:25989070-25989089 | MS.gene82421:intron | 25.0% |
| ! | CCATATGTATTGTATAGAAA+AGG | + | chr4.2:25990152-25990171 | MS.gene82421:intron | 25.0% |
| ! | CTAAAGTGGCATATAAATTT+GGG | + | chr4.2:25987999-25988018 | MS.gene82421:intron | 25.0% |
| ! | CTTTGGTTAGAAATATTAGT+GGG | + | chr4.2:25988427-25988446 | MS.gene82421:intron | 25.0% |
| ! | GATAGTTATTATGAGACAAA+GGG | - | chr4.2:25987256-25987275 | None:intergenic | 25.0% |
| ! | GTCCAATTAGACATTAAAAT+CGG | - | chr4.2:25988348-25988367 | None:intergenic | 25.0% |
| ! | GTTAAATACAATAGTAATCG+TGG | + | chr4.2:25987591-25987610 | MS.gene82421:intron | 25.0% |
| ! | GTTAGAGGGATAAAAATTAA+AGG | + | chr4.2:25986833-25986852 | MS.gene82421:intron | 25.0% |
| ! | GTTTATTGTGTATTTCATTG+TGG | + | chr4.2:25989547-25989566 | MS.gene82421:intron | 25.0% |
| ! | TGATAGTTATTATGAGACAA+AGG | - | chr4.2:25987257-25987276 | None:intergenic | 25.0% |
| ! | TTATTACCTAATGAAGTAGT+GGG | + | chr4.2:25989382-25989401 | MS.gene82421:intron | 25.0% |
| ! | TTCATGCAATAAAGGAAATT+TGG | - | chr4.2:25989342-25989361 | None:intergenic | 25.0% |
| ! | TTGCTAGAATGACATAATTT+GGG | - | chr4.2:25987742-25987761 | None:intergenic | 25.0% |
| ! | TTTATGTGAAATTGCTAAAG+TGG | + | chr4.2:25987985-25988004 | MS.gene82421:intron | 25.0% |
| ! | TTTATTACCTAATGAAGTAG+TGG | + | chr4.2:25989381-25989400 | MS.gene82421:intron | 25.0% |
| ! | TTTGATCACAACTTTGAATA+TGG | - | chr4.2:25989616-25989635 | None:intergenic | 25.0% |
| ! | TTTGCTAGAATGACATAATT+TGG | - | chr4.2:25987743-25987762 | None:intergenic | 25.0% |
| ! | TTTGGTTAGAAATATTAGTG+GGG | + | chr4.2:25988428-25988447 | MS.gene82421:intron | 25.0% |
| !! | ACTACATACTCATTATGTTT+TGG | + | chr4.2:25988994-25989013 | MS.gene82421:intron | 25.0% |
| !! | CCTTTTCTATACAATACATA+TGG | - | chr4.2:25990155-25990174 | None:intergenic | 25.0% |
| !! | GAGTTTATGATGATGATTTA+GGG | + | chr4.2:25985700-25985719 | MS.gene82421:intron | 25.0% |
| !! | GTTTTCCATACCATTAATAA+AGG | + | chr4.2:25987911-25987930 | MS.gene82421:intron | 25.0% |
| !! | TAGAAGAAAGTGTGTAAATT+TGG | + | chr4.2:25985990-25986009 | MS.gene82421:intron | 25.0% |
| !! | TCGATTTGAAGAAAAAAAAC+AGG | - | chr4.2:25990579-25990598 | None:intergenic | 25.0% |
| !! | TGAGTTTATGATGATGATTT+AGG | + | chr4.2:25985699-25985718 | MS.gene82421:intron | 25.0% |
| !!! | ACTTCTATTTTTATTGCTCA+TGG | + | chr4.2:25989931-25989950 | MS.gene82421:intron | 25.0% |
| !!! | AGATGAGCAAATTTTGATTT+TGG | - | chr4.2:25986992-25987011 | None:intergenic | 25.0% |
| !!! | ATTGTTTAGGTTGGATTTTA+AGG | + | chr4.2:25989438-25989457 | MS.gene82421:intron | 25.0% |
| !!! | GAAAGTTTTGCTTTTAGTTT+AGG | - | chr4.2:25986876-25986895 | None:intergenic | 25.0% |
| !!! | GATCTCATTATTCTAAAACA+AGG | + | chr4.2:25988560-25988579 | MS.gene82421:intron | 25.0% |
| !!! | TGTTTTCTTATCTTTGAAGT+GGG | - | chr4.2:25988151-25988170 | None:intergenic | 25.0% |
| !!! | TTGGATTTTTTGTGTTCAAT+TGG | + | chr4.2:25989136-25989155 | MS.gene82421:intron | 25.0% |
| !!! | TTGTTTAGGTTGGATTTTAA+GGG | + | chr4.2:25989439-25989458 | MS.gene82421:intron | 25.0% |
| !!! | TTGTTTTCTTATCTTTGAAG+TGG | - | chr4.2:25988152-25988171 | None:intergenic | 25.0% |
| !!! | TTTTCTAAAACTCAAAAGTC+CGG | + | chr4.2:25986283-25986302 | MS.gene82421:intron | 25.0% |
| AACAGCTTGAATAAGGAATT+TGG | + | chr4.2:25985672-25985691 | MS.gene82421:CDS | 30.0% | |
| AATCAAAGTTTCTTGGTACT+TGG | - | chr4.2:25986813-25986832 | None:intergenic | 30.0% | |
| AATGCATTCAATCTGAAAAG+AGG | - | chr4.2:25989248-25989267 | None:intergenic | 30.0% | |
| AATTAGACATTAAAATCGGC+TGG | - | chr4.2:25988344-25988363 | None:intergenic | 30.0% | |
| AATTCCTTATTCAAGCTGTT+AGG | - | chr4.2:25985672-25985691 | None:intergenic | 30.0% | |
| AATTGGTTGTACACCTAATT+TGG | + | chr4.2:25989153-25989172 | MS.gene82421:intron | 30.0% | |
| ACACGTGTAAGAGATATATT+AGG | + | chr4.2:25986538-25986557 | MS.gene82421:intron | 30.0% | |
| ACAGCTTGAATAAGGAATTT+GGG | + | chr4.2:25985673-25985692 | MS.gene82421:CDS | 30.0% | |
| ACTTTGAATATGGAATTCAG+AGG | - | chr4.2:25989606-25989625 | None:intergenic | 30.0% | |
| AGTTAGCTGGTGATATATAA+TGG | - | chr4.2:25986649-25986668 | None:intergenic | 30.0% | |
| ATCTATCCTTAAGTTCTTTC+AGG | + | chr4.2:25989738-25989757 | MS.gene82421:intron | 30.0% | |
| ATTGGTTGTACACCTAATTT+GGG | + | chr4.2:25989154-25989173 | MS.gene82421:intron | 30.0% | |
| CAACAAAACATAGACAATGT+GGG | - | chr4.2:25989272-25989291 | None:intergenic | 30.0% | |
| CAAGAAACTTTGATTGTTAG+AGG | + | chr4.2:25986818-25986837 | MS.gene82421:intron | 30.0% | |
| CAATTATGAGACATCAAATC+AGG | - | chr4.2:25990248-25990267 | None:intergenic | 30.0% | |
| CCAAAAGCTGCAAATAAATA+AGG | + | chr4.2:25989069-25989088 | MS.gene82421:intron | 30.0% | |
| CCATTATTGGGTATCAATAA+GGG | - | chr4.2:25986705-25986724 | None:intergenic | 30.0% | |
| CCTTTGGTTAGAAATATTAG+TGG | + | chr4.2:25988426-25988445 | MS.gene82421:intron | 30.0% | |
| CGAATATAAAGAGAAATTGC+AGG | + | chr4.2:25988122-25988141 | MS.gene82421:intron | 30.0% | |
| CTCTAACAATCAAAGTTTCT+TGG | - | chr4.2:25986820-25986839 | None:intergenic | 30.0% | |
| GAAGATAAAGCTGATTGTAT+TGG | + | chr4.2:25990690-25990709 | MS.gene82421:CDS | 30.0% | |
| GCTAAAGTGGCATATAAATT+TGG | + | chr4.2:25987998-25988017 | MS.gene82421:intron | 30.0% | |
| TACTAGTTAGATGGTACATT+TGG | - | chr4.2:25987349-25987368 | None:intergenic | 30.0% | |
| TAGAATGACATAATTTGGGA+CGG | - | chr4.2:25987738-25987757 | None:intergenic | 30.0% | |
| TAGTCTAGTTACCAGTTATA+TGG | + | chr4.2:25989779-25989798 | MS.gene82421:intron | 30.0% | |
| TAGTTATTATGAGACAAAGG+GGG | - | chr4.2:25987254-25987273 | None:intergenic | 30.0% | |
| TCAATCATGTAGTGATAAAG+TGG | - | chr4.2:25988509-25988528 | None:intergenic | 30.0% | |
| TGAACATTGTACTAGTTAGA+TGG | - | chr4.2:25987358-25987377 | None:intergenic | 30.0% | |
| TGAAGAAAAAAAACAGGCAA+TGG | - | chr4.2:25990573-25990592 | None:intergenic | 30.0% | |
| TTAGTAATTGTGTGATTGGA+AGG | + | chr4.2:25990378-25990397 | MS.gene82421:intron | 30.0% | |
| TTCATACTGCACAATTCATT+AGG | + | chr4.2:25986208-25986227 | MS.gene82421:intron | 30.0% | |
| TTGAAAGTCATAAGAGTCTT+TGG | + | chr4.2:25986237-25986256 | MS.gene82421:intron | 30.0% | |
| TTGGTTAGAAATATTAGTGG+GGG | + | chr4.2:25988429-25988448 | MS.gene82421:intron | 30.0% | |
| ! | ACATGTTTGAAACTTGATGT+AGG | + | chr4.2:25990292-25990311 | MS.gene82421:intron | 30.0% |
| ! | AGAAAAAGCAGTCAAGTTTT+TGG | + | chr4.2:25990215-25990234 | MS.gene82421:intron | 30.0% |
| ! | CATGATGGAGAATATTGAAA+AGG | + | chr4.2:25985882-25985901 | MS.gene82421:CDS | 30.0% |
| ! | CCACTAATATTTCTAACCAA+AGG | - | chr4.2:25988429-25988448 | None:intergenic | 30.0% |
| ! | GATGATTTTGTTGCGAAATA+TGG | + | chr4.2:25985621-25985640 | MS.gene82421:CDS | 30.0% |
| ! | GTTCTAGTTATGATTACCTT+TGG | + | chr4.2:25988410-25988429 | MS.gene82421:intron | 30.0% |
| ! | TGCATATGTTCCTTCAATTT+TGG | - | chr4.2:25985787-25985806 | None:intergenic | 30.0% |
| ! | TTCATTTTACAGCTCAAGAA+AGG | - | chr4.2:25986764-25986783 | None:intergenic | 30.0% |
| ! | TTGTTCTAAATGGAGATAGA+AGG | + | chr4.2:25989501-25989520 | MS.gene82421:intron | 30.0% |
| ! | TTTTAATGTCTAATTGGACC+AGG | + | chr4.2:25988349-25988368 | MS.gene82421:intron | 30.0% |
| !! | AAAATGGATTGACTGGATAA+TGG | - | chr4.2:25988211-25988230 | None:intergenic | 30.0% |
| !! | AAAGTGACACTCTTTTAAGA+CGG | - | chr4.2:25987295-25987314 | None:intergenic | 30.0% |
| !! | AGAAATGAAAATGGATTGAC+TGG | - | chr4.2:25988218-25988237 | None:intergenic | 30.0% |
| !! | AGCCGATTTTAATGTCTAAT+TGG | + | chr4.2:25988343-25988362 | MS.gene82421:intron | 30.0% |
| !! | ATTTTAAGGGAGCTAATGAT+AGG | + | chr4.2:25989452-25989471 | MS.gene82421:intron | 30.0% |
| !! | CCTTATTTATTTGCAGCTTT+TGG | - | chr4.2:25989072-25989091 | None:intergenic | 30.0% |
| !! | CTGTTTTCATTTTTCTGCTA+CGG | + | chr4.2:25988639-25988658 | MS.gene82421:intron | 30.0% |
| !! | GGTTTGTTAACTACAATAAC+CGG | + | chr4.2:25988248-25988267 | MS.gene82421:intron | 30.0% |
| !! | TCTATGTTTTGTTGGTGTTT+GGG | + | chr4.2:25989278-25989297 | MS.gene82421:intron | 30.0% |
| !! | TTTTAAGGGAGCTAATGATA+GGG | + | chr4.2:25989453-25989472 | MS.gene82421:intron | 30.0% |
| !!! | GCATTTTGATTGCATATTGA+AGG | + | chr4.2:25990105-25990124 | MS.gene82421:intron | 30.0% |
| !!! | TTCTAACTTGCTGTTTTATG+AGG | + | chr4.2:25990605-25990624 | MS.gene82421:intron | 30.0% |
| !!! | TTGCGATTTTTGTTGTTGAT+GGG | + | chr4.2:25985727-25985746 | MS.gene82421:intron | 30.0% |
| AACCTTCCTTATCCCAAATT+AGG | - | chr4.2:25989169-25989188 | None:intergenic | 35.0% | |
| AAGAGGAATGCAAACTTAGT+CGG | - | chr4.2:25989231-25989250 | None:intergenic | 35.0% | |
| ACCATTCGTATCGTATGTAA+AGG | - | chr4.2:25986079-25986098 | None:intergenic | 35.0% | |
| ACCTATTAACAGTCAAACCT+TGG | + | chr4.2:25988048-25988067 | MS.gene82421:intron | 35.0% | |
| ACCTTTACATACGATACGAA+TGG | + | chr4.2:25986075-25986094 | MS.gene82421:intron | 35.0% | |
| AGATCTTTACCATAACACTC+GGG | - | chr4.2:25990498-25990517 | None:intergenic | 35.0% | |
| AGGAAGTGATAATCGAAACA+TGG | - | chr4.2:25989575-25989594 | None:intergenic | 35.0% | |
| AGTGGCATATAAATTTGGGA+CGG | + | chr4.2:25988003-25988022 | MS.gene82421:intron | 35.0% | |
| ATACAATAGTAATCGTGGGA+CGG | + | chr4.2:25987596-25987615 | MS.gene82421:intron | 35.0% | |
| ATTATATGATGCGAGCTGAA+TGG | + | chr4.2:25985932-25985951 | MS.gene82421:intron | 35.0% | |
| ATTATCGACGAGGTAATTGA+AGG | - | chr4.2:25985249-25985268 | None:intergenic | 35.0% | |
| CAATCACACAATTACTAACC+TGG | - | chr4.2:25990376-25990395 | None:intergenic | 35.0% | |
| CAGGTTAGTAATTGTGTGAT+TGG | + | chr4.2:25990374-25990393 | MS.gene82421:intron | 35.0% | |
| CATGTAGTGATAAAGTGGTT+TGG | - | chr4.2:25988504-25988523 | None:intergenic | 35.0% | |
| CCAACAAAACATAGACAATG+TGG | - | chr4.2:25989273-25989292 | None:intergenic | 35.0% | |
| CCCTTATTGATACCCAATAA+TGG | + | chr4.2:25986702-25986721 | MS.gene82421:intron | 35.0% | |
| CTCTTAGGTTAAAGTAGAAG+AGG | - | chr4.2:25985911-25985930 | None:intergenic | 35.0% | |
| CTCTTCTACTTTAACCTAAG+AGG | + | chr4.2:25985909-25985928 | MS.gene82421:intron | 35.0% | |
| CTGCTTATGGGTCTAATAAA+AGG | + | chr4.2:25986667-25986686 | MS.gene82421:intron | 35.0% | |
| GAGATCTTTACCATAACACT+CGG | - | chr4.2:25990499-25990518 | None:intergenic | 35.0% | |
| GATTTGTACTTCTGTAGCAT+AGG | + | chr4.2:25988721-25988740 | MS.gene82421:intron | 35.0% | |
| GCCATTATTGGGTATCAATA+AGG | - | chr4.2:25986706-25986725 | None:intergenic | 35.0% | |
| GTAATCATAACTAGAACAGC+CGG | - | chr4.2:25988407-25988426 | None:intergenic | 35.0% | |
| TAAACAGAAAACCCAAGACT+CGG | - | chr4.2:25986345-25986364 | None:intergenic | 35.0% | |
| TATTGGGTATCAATAAGGGA+TGG | - | chr4.2:25986701-25986720 | None:intergenic | 35.0% | |
| TCAATTTATTGCACCCCTAT+GGG | - | chr4.2:25989669-25989688 | None:intergenic | 35.0% | |
| TCCAAGGTTTGACTGTTAAT+AGG | - | chr4.2:25988052-25988071 | None:intergenic | 35.0% | |
| TCGCATCATATAATCCTCTT+AGG | - | chr4.2:25985926-25985945 | None:intergenic | 35.0% | |
| TGGTTAGAAATATTAGTGGG+GGG | + | chr4.2:25988430-25988449 | MS.gene82421:intron | 35.0% | |
| TTAACAGTCAAACCTTGGAA+TGG | + | chr4.2:25988053-25988072 | MS.gene82421:intron | 35.0% | |
| TTCAATTACCTCGTCGATAA+TGG | + | chr4.2:25985248-25985267 | MS.gene82421:CDS | 35.0% | |
| TTTGCTTCTTCTGTGTGAAA+TGG | + | chr4.2:25987569-25987588 | MS.gene82421:intron | 35.0% | |
| ! | AAGCGTAGATCAGAGATTTT+TGG | - | chr4.2:25985094-25985113 | None:intergenic | 35.0% |
| ! | AAGTCAGCGAACATTGTTTT+CGG | - | chr4.2:25989805-25989824 | None:intergenic | 35.0% |
| ! | AATTACTAACCTGGTGATGA+AGG | - | chr4.2:25990367-25990386 | None:intergenic | 35.0% |
| ! | AATTTGCCTTTTCCATTCCA+AGG | - | chr4.2:25988068-25988087 | None:intergenic | 35.0% |
| ! | ATTGTTTTCGGCCATATAAC+TGG | - | chr4.2:25989793-25989812 | None:intergenic | 35.0% |
| ! | CCACATTGTCTATGTTTTGT+TGG | + | chr4.2:25989270-25989289 | MS.gene82421:intron | 35.0% |
| ! | GATTTTGTTGCGAAATATGG+TGG | + | chr4.2:25985624-25985643 | MS.gene82421:CDS | 35.0% |
| ! | GCATTTTGCTCATGTTGTAT+TGG | + | chr4.2:25986154-25986173 | MS.gene82421:intron | 35.0% |
| ! | TGTACACCTAATTTGGGATA+AGG | + | chr4.2:25989160-25989179 | MS.gene82421:intron | 35.0% |
| !! | AATTGCACTTGGCTTTTGAA+AGG | + | chr4.2:25987106-25987125 | MS.gene82421:intron | 35.0% |
| !! | CTCTCTACTTTTCTTCTGAT+AGG | - | chr4.2:25990197-25990216 | None:intergenic | 35.0% |
| !! | GTCTATGTTTTGTTGGTGTT+TGG | + | chr4.2:25989277-25989296 | MS.gene82421:intron | 35.0% |
| !! | TAGTGATAAAGTGGTTTGGT+AGG | - | chr4.2:25988500-25988519 | None:intergenic | 35.0% |
| !! | TTTTCATTTTTCTGCTACGG+AGG | + | chr4.2:25988642-25988661 | MS.gene82421:intron | 35.0% |
| !!! | GTTGCGATTTTTGTTGTTGA+TGG | + | chr4.2:25985726-25985745 | MS.gene82421:intron | 35.0% |
| !!! | TTCAGTTTTGTGTACTGACT+AGG | - | chr4.2:25988092-25988111 | None:intergenic | 35.0% |
| ACATCACCCACTACTTCATT+AGG | - | chr4.2:25989391-25989410 | None:intergenic | 40.0% | |
| AGCTGGTGATATATAATGGC+AGG | - | chr4.2:25986645-25986664 | None:intergenic | 40.0% | |
| ATAAGAACCGGACTACAAGT+TGG | - | chr4.2:25988320-25988339 | None:intergenic | 40.0% | |
| ATCACCAGCTAACTGCTTAT+GGG | + | chr4.2:25986655-25986674 | MS.gene82421:intron | 40.0% | |
| ATCCCACACAAAAGATGAGT+CGG | + | chr4.2:25990532-25990551 | MS.gene82421:intron | 40.0% | |
| ATGACACCACAGCCATTATT+GGG | - | chr4.2:25986717-25986736 | None:intergenic | 40.0% | |
| ATGTCTTCTTAACCGAGTCT+TGG | + | chr4.2:25986330-25986349 | MS.gene82421:intron | 40.0% | |
| CACACGCACAGAAATGAAAA+TGG | - | chr4.2:25988227-25988246 | None:intergenic | 40.0% | |
| CATATCCCACTAAGTGTGAT+CGG | + | chr4.2:25987485-25987504 | MS.gene82421:intron | 40.0% | |
| CCAAAATCCGCAGAAAAATG+TGG | + | chr4.2:25990656-25990675 | MS.gene82421:CDS | 40.0% | |
| CGATAGCCTGAAAGAACTTA+AGG | - | chr4.2:25989747-25989766 | None:intergenic | 40.0% | |
| CTAGCAAGCATTTGTAGACA+TGG | + | chr4.2:25990067-25990086 | MS.gene82421:intron | 40.0% | |
| CTCAATTTATTGCACCCCTA+TGG | - | chr4.2:25989670-25989689 | None:intergenic | 40.0% | |
| CTTCCATTTCTTAGACTCTG+AGG | - | chr4.2:25988770-25988789 | None:intergenic | 40.0% | |
| GAACTACGATTACGCTAGAT+CGG | - | chr4.2:25985330-25985349 | None:intergenic | 40.0% | |
| GCTGGTGATATATAATGGCA+GGG | - | chr4.2:25986644-25986663 | None:intergenic | 40.0% | |
| GGGTCTAATAAAAGGTCATC+TGG | + | chr4.2:25986675-25986694 | MS.gene82421:intron | 40.0% | |
| GGTACTTGGCAATTACTTCA+GGG | - | chr4.2:25986799-25986818 | None:intergenic | 40.0% | |
| GGTTAGAAATATTAGTGGGG+GGG | + | chr4.2:25988431-25988450 | MS.gene82421:intron | 40.0% | |
| GTCAAACCTTGGAATGGAAA+AGG | + | chr4.2:25988059-25988078 | MS.gene82421:intron | 40.0% | |
| GTTGAAGTTTCCGCTGAATT+CGG | - | chr4.2:25985153-25985172 | None:intergenic | 40.0% | |
| TACAATAACCGGTCAATCAC+AGG | + | chr4.2:25988259-25988278 | MS.gene82421:intron | 40.0% | |
| TACAATAGTAATCGTGGGAC+GGG | + | chr4.2:25987597-25987616 | MS.gene82421:intron | 40.0% | |
| TATCACCAGCTAACTGCTTA+TGG | + | chr4.2:25986654-25986673 | MS.gene82421:intron | 40.0% | |
| TCTGAATACACCGAATTCAG+CGG | + | chr4.2:25985140-25985159 | MS.gene82421:CDS | 40.0% | |
| TGCACCTAACAGCTTGAATA+AGG | + | chr4.2:25985665-25985684 | MS.gene82421:CDS | 40.0% | |
| TGGTACTTGGCAATTACTTC+AGG | - | chr4.2:25986800-25986819 | None:intergenic | 40.0% | |
| TGGTTTACCAACTTGTAGTC+CGG | + | chr4.2:25988310-25988329 | MS.gene82421:intron | 40.0% | |
| TGTCTTCTTAACCGAGTCTT+GGG | + | chr4.2:25986331-25986350 | MS.gene82421:intron | 40.0% | |
| TGTTCGATGTCCACAAACAT+GGG | + | chr4.2:25988852-25988871 | MS.gene82421:intron | 40.0% | |
| TTGAAACTTGATGTAGGTCC+TGG | + | chr4.2:25990298-25990317 | MS.gene82421:intron | 40.0% | |
| TTGAAGCTATGCTCTTCACT+AGG | + | chr4.2:25989985-25990004 | MS.gene82421:intron | 40.0% | |
| TTGATACCCAATAATGGCTG+TGG | + | chr4.2:25986708-25986727 | MS.gene82421:intron | 40.0% | |
| TTGTTGCGAAATATGGTGGT+GGG | + | chr4.2:25985628-25985647 | MS.gene82421:CDS | 40.0% | |
| TTTGTTGCGAAATATGGTGG+TGG | + | chr4.2:25985627-25985646 | MS.gene82421:CDS | 40.0% | |
| ! | AAAAGAGAGTGCAGAATGAG+TGG | - | chr4.2:25988601-25988620 | None:intergenic | 40.0% |
| ! | AAAGAGAGTGCAGAATGAGT+GGG | - | chr4.2:25988600-25988619 | None:intergenic | 40.0% |
| ! | AATGACATAATTTGGGACGG+AGG | - | chr4.2:25987735-25987754 | None:intergenic | 40.0% |
| ! | AGAGTCTTTGGAGAGACAAA+AGG | + | chr4.2:25986249-25986268 | MS.gene82421:intron | 40.0% |
| ! | AGTCTTTGGAGAGACAAAAG+GGG | + | chr4.2:25986251-25986270 | MS.gene82421:intron | 40.0% |
| ! | ATGACATAATTTGGGACGGA+GGG | - | chr4.2:25987734-25987753 | None:intergenic | 40.0% |
| ! | CACCTAATTTGGGATAAGGA+AGG | + | chr4.2:25989164-25989183 | MS.gene82421:intron | 40.0% |
| ! | CAGCTCAAGAAAGGTTTTTC+AGG | - | chr4.2:25986755-25986774 | None:intergenic | 40.0% |
| ! | CCACATTTTTCTGCGGATTT+TGG | - | chr4.2:25990659-25990678 | None:intergenic | 40.0% |
| ! | GAGTCTTTGGAGAGACAAAA+GGG | + | chr4.2:25986250-25986269 | MS.gene82421:intron | 40.0% |
| ! | GTTTGGTAGGAGGTACATAA+AGG | - | chr4.2:25988487-25988506 | None:intergenic | 40.0% |
| ! | TATGACTCCTGAGTTTGCTT+GGG | + | chr4.2:25988930-25988949 | MS.gene82421:intron | 40.0% |
| ! | TGTAGCGTATTGTGTTGTTG+CGG | + | chr4.2:25985548-25985567 | MS.gene82421:intron | 40.0% |
| ! | TTATGACTCCTGAGTTTGCT+TGG | + | chr4.2:25988929-25988948 | MS.gene82421:intron | 40.0% |
| ! | TTGTGTTGTTGCGGATGAAA+CGG | + | chr4.2:25985557-25985576 | MS.gene82421:CDS | 40.0% |
| ! | TTTGCAGCCACATTTTTCTG+CGG | - | chr4.2:25990666-25990685 | None:intergenic | 40.0% |
| ! | TTTTCATTTCTGTGCGTGTG+TGG | + | chr4.2:25988227-25988246 | MS.gene82421:intron | 40.0% |
| !! | AGGCTTGACACAGTCATTTT+TGG | + | chr4.2:25988741-25988760 | MS.gene82421:intron | 40.0% |
| !! | GGAATTCAGAGGCATCAAAT+AGG | - | chr4.2:25989595-25989614 | None:intergenic | 40.0% |
| !! | GTGAATTTGTTGTTAGACGC+TGG | - | chr4.2:25985206-25985225 | None:intergenic | 40.0% |
| !! | TGAAGTGAAAGGTGTCATGA+TGG | + | chr4.2:25985867-25985886 | MS.gene82421:CDS | 40.0% |
| !! | TGATAAAGTGGTTTGGTAGG+AGG | - | chr4.2:25988497-25988516 | None:intergenic | 40.0% |
| !!! | AACTTGCTGTTTTATGAGGC+AGG | + | chr4.2:25990609-25990628 | MS.gene82421:intron | 40.0% |
| !!! | CTTGACACAGTCATTTTTGG+GGG | + | chr4.2:25988744-25988763 | MS.gene82421:intron | 40.0% |
| !!! | GCTTGACACAGTCATTTTTG+GGG | + | chr4.2:25988743-25988762 | MS.gene82421:intron | 40.0% |
| !!! | GGCTTGACACAGTCATTTTT+GGG | + | chr4.2:25988742-25988761 | MS.gene82421:intron | 40.0% |
| AAATCGGCTGGCATAAGAAC+CGG | - | chr4.2:25988332-25988351 | None:intergenic | 45.0% | |
| AACCAAAAGATGGCAACGCA+AGG | - | chr4.2:25989530-25989549 | None:intergenic | 45.0% | |
| AACTGTAGCCATTATCGACG+AGG | - | chr4.2:25985259-25985278 | None:intergenic | 45.0% | |
| AAGGAAGGTTCACAAGGACT+AGG | + | chr4.2:25989179-25989198 | MS.gene82421:intron | 45.0% | |
| AATTGGACCAGGCAGAGTTA+CGG | + | chr4.2:25988360-25988379 | MS.gene82421:intron | 45.0% | |
| ACCAAAAGATGGCAACGCAA+GGG | - | chr4.2:25989529-25989548 | None:intergenic | 45.0% | |
| ACTAAGTGTGATCGGCTACA+TGG | + | chr4.2:25987493-25987512 | MS.gene82421:intron | 45.0% | |
| ACTTCGCGGTCTCACTTATT+AGG | - | chr4.2:25986105-25986124 | None:intergenic | 45.0% | |
| AGCTAATGATAGGGTGAGTC+AGG | + | chr4.2:25989462-25989481 | MS.gene82421:intron | 45.0% | |
| AGGAAGGTTCACAAGGACTA+GGG | + | chr4.2:25989180-25989199 | MS.gene82421:intron | 45.0% | |
| ATACGTAACGCAGAACAAGC+CGG | - | chr4.2:25986305-25986324 | None:intergenic | 45.0% | |
| ATCTACGCTTTCGTTTCTCG+CGG | + | chr4.2:25985104-25985123 | MS.gene82421:CDS | 45.0% | |
| ATGTAGCCGATCACACTTAG+TGG | - | chr4.2:25987494-25987513 | None:intergenic | 45.0% | |
| CACAAGACTTCAGGAACTCA+GGG | + | chr4.2:25990632-25990651 | MS.gene82421:CDS | 45.0% | |
| CATGACACCACAGCCATTAT+TGG | - | chr4.2:25986718-25986737 | None:intergenic | 45.0% | |
| CCACAAACATGGGATAGTGT+AGG | + | chr4.2:25988862-25988881 | MS.gene82421:intron | 45.0% | |
| CCTACACTATCCCATGTTTG+TGG | - | chr4.2:25988865-25988884 | None:intergenic | 45.0% | |
| CGATCACACTTAGTGGGATA+TGG | - | chr4.2:25987487-25987506 | None:intergenic | 45.0% | |
| CGATTGGGAGGACAATTATG+AGG | - | chr4.2:25990735-25990754 | None:intergenic | 45.0% | |
| CTGTTCGATGTCCACAAACA+TGG | + | chr4.2:25988851-25988870 | MS.gene82421:intron | 45.0% | |
| GAGTCACTTGCTCATGCTAT+CGG | + | chr4.2:25988672-25988691 | MS.gene82421:intron | 45.0% | |
| GCTAATGATAGGGTGAGTCA+GGG | + | chr4.2:25989463-25989482 | MS.gene82421:intron | 45.0% | |
| GGTCAAAACCTGTGATTGAC+CGG | - | chr4.2:25988270-25988289 | None:intergenic | 45.0% | |
| GTATGTAGCCATAGCCCATA+GGG | + | chr4.2:25989652-25989671 | MS.gene82421:intron | 45.0% | |
| TAGACCCATAAGCAGTTAGC+TGG | - | chr4.2:25986662-25986681 | None:intergenic | 45.0% | |
| TATGTAGCCATAGCCCATAG+GGG | + | chr4.2:25989653-25989672 | MS.gene82421:intron | 45.0% | |
| TCACAAGGACTAGGGTTCAA+GGG | + | chr4.2:25989188-25989207 | MS.gene82421:intron | 45.0% | |
| TCCCACACAAAAGATGAGTC+GGG | + | chr4.2:25990533-25990552 | MS.gene82421:intron | 45.0% | |
| TGGGATAAGGAAGGTTCACA+AGG | + | chr4.2:25989173-25989192 | MS.gene82421:intron | 45.0% | |
| TGTAGCCGATCACACTTAGT+GGG | - | chr4.2:25987493-25987512 | None:intergenic | 45.0% | |
| TTCACAAGGACTAGGGTTCA+AGG | + | chr4.2:25989187-25989206 | MS.gene82421:intron | 45.0% | |
| TTGTGGCAGGCCAAAATTGA+AGG | + | chr4.2:25985774-25985793 | MS.gene82421:intron | 45.0% | |
| ! | AAGAGAGTGCAGAATGAGTG+GGG | - | chr4.2:25988599-25988618 | None:intergenic | 45.0% |
| ! | ATCTTTTGTGTGGGATGGAG+AGG | - | chr4.2:25990528-25990547 | None:intergenic | 45.0% |
| ! | GACTCATCTTTTGTGTGGGA+TGG | - | chr4.2:25990533-25990552 | None:intergenic | 45.0% |
| ! | GCAGTATTGTGTTGATCACC+CGG | + | chr4.2:25985804-25985823 | MS.gene82421:CDS | 45.0% |
| ! | GGGGGAAAAGATAGAGCTTT+TGG | + | chr4.2:25990325-25990344 | MS.gene82421:CDS | 45.0% |
| ! | GTCTTTGGAGAGACAAAAGG+GGG | + | chr4.2:25986252-25986271 | MS.gene82421:intron | 45.0% |
| !! | AAAGGTACCCAAGCAAACTC+AGG | - | chr4.2:25988940-25988959 | None:intergenic | 45.0% |
| !! | CAATGTTCGCTGACTTCTCA+TGG | + | chr4.2:25989809-25989828 | MS.gene82421:intron | 45.0% |
| !! | CTGAAGGCATTGAAAAGCGA+TGG | - | chr4.2:25985177-25985196 | None:intergenic | 45.0% |
| !! | GAGTAAGCTTGCTAAGGTGA+AGG | + | chr4.2:25985834-25985853 | MS.gene82421:CDS | 45.0% |
| !! | AAAAAAAAAAAACATAATAA+AGG | - | chr4.2:25988958-25988977 | None:intergenic | 5.0% |
| !! | TATATAATAAATACTATATT+GGG | - | chr4.2:25987085-25987104 | None:intergenic | 5.0% |
| !! | TATTATAGAAAATAATATAA+TGG | - | chr4.2:25988810-25988829 | None:intergenic | 5.0% |
| !! | TTAAATATAACAAAAAAAAT+TGG | + | chr4.2:25989117-25989136 | MS.gene82421:intron | 5.0% |
| !! | TTATATAATAAATACTATAT+TGG | - | chr4.2:25987086-25987105 | None:intergenic | 5.0% |
| !!! | ATTATGTTTTTTTTTTTTTT+TGG | + | chr4.2:25988960-25988979 | MS.gene82421:intron | 5.0% |
| AACGGTTGGAAGACAAGTGC+CGG | + | chr4.2:25985575-25985594 | MS.gene82421:CDS | 50.0% | |
| ACACGTTCCAGAAAAGCCAC+CGG | - | chr4.2:25985597-25985616 | None:intergenic | 50.0% | |
| ACTTGATGTAGGTCCTGGAC+AGG | + | chr4.2:25990303-25990322 | MS.gene82421:intron | 50.0% | |
| CACAAGGACTAGGGTTCAAG+GGG | + | chr4.2:25989189-25989208 | MS.gene82421:intron | 50.0% | |
| CCAAAAGATGGCAACGCAAG+GGG | - | chr4.2:25989528-25989547 | None:intergenic | 50.0% | |
| CCACACAAAAGATGAGTCGG+GGG | + | chr4.2:25990535-25990554 | MS.gene82421:intron | 50.0% | |
| CCCACACAAAAGATGAGTCG+GGG | + | chr4.2:25990534-25990553 | MS.gene82421:intron | 50.0% | |
| CGTATGTAGCCATAGCCCAT+AGG | + | chr4.2:25989651-25989670 | MS.gene82421:intron | 50.0% | |
| CTTGATGTAGGTCCTGGACA+GGG | + | chr4.2:25990304-25990323 | MS.gene82421:intron | 50.0% | |
| CTTGGTTCAACCAGCTGAAC+CGG | + | chr4.2:25988385-25988404 | MS.gene82421:intron | 50.0% | |
| GACTGAGAACCTTCATCACC+AGG | + | chr4.2:25990355-25990374 | MS.gene82421:CDS | 50.0% | |
| GCACAAGACTTCAGGAACTC+AGG | + | chr4.2:25990631-25990650 | MS.gene82421:CDS | 50.0% | |
| GGGCCTCAGAGTCTAAGAAA+TGG | + | chr4.2:25988764-25988783 | MS.gene82421:intron | 50.0% | |
| GTTGTTGCGGATGAAACGGT+TGG | + | chr4.2:25985561-25985580 | MS.gene82421:CDS | 50.0% | |
| TACTGGCCAGACTAACTTCG+CGG | - | chr4.2:25986119-25986138 | None:intergenic | 50.0% | |
| TAGACGCTGGAAGCTTCTGA+AGG | - | chr4.2:25985193-25985212 | None:intergenic | 50.0% | |
| TTGATGTAGGTCCTGGACAG+GGG | + | chr4.2:25990305-25990324 | MS.gene82421:intron | 50.0% | |
| TTGGAGAGACAAAAGGGGGA+GGG | + | chr4.2:25986256-25986275 | MS.gene82421:intron | 50.0% | |
| TTGTGTGGGATGGAGAGGAA+GGG | - | chr4.2:25990523-25990542 | None:intergenic | 50.0% | |
| TTTGGAGAGACAAAAGGGGG+AGG | + | chr4.2:25986255-25986274 | MS.gene82421:intron | 50.0% | |
| TTTGTGTGGGATGGAGAGGA+AGG | - | chr4.2:25990524-25990543 | None:intergenic | 50.0% | |
| ! | AGAGAGTGCAGAATGAGTGG+GGG | - | chr4.2:25988598-25988617 | None:intergenic | 50.0% |
| ! | CCCCGACTCATCTTTTGTGT+GGG | - | chr4.2:25990537-25990556 | None:intergenic | 50.0% |
| ! | GCTCAGGTGTCTGAAGTGAA+AGG | + | chr4.2:25985856-25985875 | MS.gene82421:CDS | 50.0% |
| ! | GTATTGTGTTGATCACCCGG+AGG | + | chr4.2:25985807-25985826 | MS.gene82421:CDS | 50.0% |
| ! | TATTGCACCCCTATGGGCTA+TGG | - | chr4.2:25989663-25989682 | None:intergenic | 50.0% |
| !! | GGAGGTGAGTAAGCTTGCTA+AGG | + | chr4.2:25985828-25985847 | MS.gene82421:CDS | 50.0% |
| !! | TGCGAAATATGGTGGTGGGA+AGG | + | chr4.2:25985632-25985651 | MS.gene82421:CDS | 50.0% |
| !!! | GGCTTTTCTGGAACGTGTGA+AGG | + | chr4.2:25985599-25985618 | MS.gene82421:CDS | 50.0% |
| CAAGCTTACTCACCTCCTCC+GGG | - | chr4.2:25985825-25985844 | None:intergenic | 55.0% | |
| CCAAGAACCGTAACTCTGCC+TGG | - | chr4.2:25988370-25988389 | None:intergenic | 55.0% | |
| CCAGGCAGAGTTACGGTTCT+TGG | + | chr4.2:25988367-25988386 | MS.gene82421:intron | 55.0% | |
| GATGGCTCTCCCGAGTGTTA+TGG | + | chr4.2:25990486-25990505 | MS.gene82421:intron | 55.0% | |
| GCAAGCTTACTCACCTCCTC+CGG | - | chr4.2:25985826-25985845 | None:intergenic | 55.0% | |
| GTGAGACCGCGAAGTTAGTC+TGG | + | chr4.2:25986110-25986129 | MS.gene82421:intron | 55.0% | |
| TGAGGCAGGCACAAGACTTC+AGG | + | chr4.2:25990623-25990642 | MS.gene82421:intron | 55.0% | |
| TGATGTAGGTCCTGGACAGG+GGG | + | chr4.2:25990306-25990325 | MS.gene82421:intron | 55.0% | |
| TGTGTGGGATGGAGAGGAAG+GGG | - | chr4.2:25990522-25990541 | None:intergenic | 55.0% | |
| ! | ACTAGAACAGCCGGTTCAGC+TGG | - | chr4.2:25988398-25988417 | None:intergenic | 55.0% |
| ! | CCCCCGACTCATCTTTTGTG+TGG | - | chr4.2:25990538-25990557 | None:intergenic | 55.0% |
| ! | CCCCTTGCGTTGCCATCTTT+TGG | + | chr4.2:25989525-25989544 | MS.gene82421:intron | 55.0% |
| ! | CTATCTTTTCCCCCCTGTCC+AGG | - | chr4.2:25990319-25990338 | None:intergenic | 55.0% |
| ! | GCTTGCTAAGGTGAAGGCTC+AGG | + | chr4.2:25985840-25985859 | MS.gene82421:CDS | 55.0% |
| ! | TTGTGTTGATCACCCGGAGG+AGG | + | chr4.2:25985810-25985829 | MS.gene82421:CDS | 55.0% |
| !! | GTAGTGGGTGATGTTACGCC+AGG | + | chr4.2:25989397-25989416 | MS.gene82421:intron | 55.0% |
| !!! | ACAAGTGCCGGTGGCTTTTC+TGG | + | chr4.2:25985587-25985606 | MS.gene82421:CDS | 55.0% |
| GATGTAGGTCCTGGACAGGG+GGG | + | chr4.2:25990307-25990326 | MS.gene82421:intron | 60.0% | |
| GTGTGGGATGGAGAGGAAGG+GGG | - | chr4.2:25990521-25990540 | None:intergenic | 60.0% | |
| !! | GGTTGGAAGACAAGTGCCGG+TGG | + | chr4.2:25985578-25985597 | MS.gene82421:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 25985080 | 25990761 | 25985080 | ID=MS.gene82421 |
| chr4.2 | mRNA | 25985080 | 25990761 | 25985080 | ID=MS.gene82421.t1;Parent=MS.gene82421 |
| chr4.2 | exon | 25985080 | 25985275 | 25985080 | ID=MS.gene82421.t1.exon1;Parent=MS.gene82421.t1 |
| chr4.2 | CDS | 25985080 | 25985275 | 25985080 | ID=cds.MS.gene82421.t1;Parent=MS.gene82421.t1 |
| chr4.2 | exon | 25985553 | 25985694 | 25985553 | ID=MS.gene82421.t1.exon2;Parent=MS.gene82421.t1 |
| chr4.2 | CDS | 25985553 | 25985694 | 25985553 | ID=cds.MS.gene82421.t1;Parent=MS.gene82421.t1 |
| chr4.2 | exon | 25985783 | 25985903 | 25985783 | ID=MS.gene82421.t1.exon3;Parent=MS.gene82421.t1 |
| chr4.2 | CDS | 25985783 | 25985903 | 25985783 | ID=cds.MS.gene82421.t1;Parent=MS.gene82421.t1 |
| chr4.2 | exon | 25990314 | 25990376 | 25990314 | ID=MS.gene82421.t1.exon4;Parent=MS.gene82421.t1 |
| chr4.2 | CDS | 25990314 | 25990376 | 25990314 | ID=cds.MS.gene82421.t1;Parent=MS.gene82421.t1 |
| chr4.2 | exon | 25990627 | 25990761 | 25990627 | ID=MS.gene82421.t1.exon5;Parent=MS.gene82421.t1 |
| chr4.2 | CDS | 25990627 | 25990761 | 25990627 | ID=cds.MS.gene82421.t1;Parent=MS.gene82421.t1 |
| Gene Sequence |
| Protein sequence |
