Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85590.t1 | XP_013468768.1 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 5.60E-99 | 370.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85590.t1 | Q55AD9 | 60.6 | 180 | 68 | 1 | 1 | 177 | 1 | 180 | 5.8e-60 | 231.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85590.t1 | I3SWQ0 | 99.4 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 4.1e-99 | 370.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85590.t1 | MTR_1g076550 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 1.48e-134 | 374 |
| MS.gene85590.t1 | MTR_5g034130 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.60e-67 | 204 |
| MS.gene85590.t1 | MTR_5g034125 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.60e-67 | 204 |
| MS.gene85590.t1 | MTR_6g005820 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 1.77e-67 | 204 |
| MS.gene85590.t1 | MTR_1g086480 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.08e-67 | 204 |
| MS.gene85590.t1 | MTR_7g109960 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 6.07e-67 | 202 |
| MS.gene85590.t1 | MTR_5g016540 | 50.000 | 180 | 90 | 0 | 1 | 180 | 1 | 180 | 2.81e-65 | 198 |
| MS.gene85590.t1 | MTR_5g007810 | 51.149 | 174 | 85 | 0 | 1 | 174 | 1 | 174 | 6.46e-62 | 190 |
| MS.gene85590.t1 | MTR_4g077640 | 50.575 | 174 | 86 | 0 | 1 | 174 | 1 | 174 | 1.12e-60 | 187 |
| MS.gene85590.t1 | MTR_4g128910 | 48.276 | 174 | 90 | 0 | 1 | 174 | 1 | 174 | 2.12e-60 | 186 |
| MS.gene85590.t1 | MTR_5g007820 | 47.253 | 182 | 94 | 1 | 1 | 180 | 1 | 182 | 4.01e-56 | 175 |
| MS.gene85590.t1 | MTR_5g007840 | 35.681 | 213 | 92 | 2 | 1 | 180 | 1 | 201 | 5.04e-40 | 135 |
| MS.gene85590.t1 | MTR_8g077540 | 39.264 | 163 | 98 | 1 | 19 | 180 | 18 | 180 | 1.97e-39 | 132 |
| MS.gene85590.t1 | MTR_8g077540 | 39.264 | 163 | 98 | 1 | 19 | 180 | 44 | 206 | 4.75e-39 | 132 |
| MS.gene85590.t1 | MTR_2g022200 | 34.973 | 183 | 106 | 2 | 1 | 173 | 1 | 180 | 3.17e-32 | 115 |
| MS.gene85590.t1 | MTR_5g078090 | 38.028 | 142 | 87 | 1 | 12 | 152 | 14 | 155 | 3.37e-28 | 103 |
| MS.gene85590.t1 | MTR_5g015370 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 1.19e-24 | 95.1 |
| MS.gene85590.t1 | MTR_7g112090 | 35.088 | 171 | 99 | 2 | 16 | 174 | 19 | 189 | 1.68e-23 | 92.4 |
| MS.gene85590.t1 | MTR_4g026950 | 34.058 | 138 | 84 | 2 | 19 | 152 | 2 | 136 | 8.95e-23 | 89.7 |
| MS.gene85590.t1 | MTR_2g034640 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 4.41e-22 | 88.6 |
| MS.gene85590.t1 | MTR_4g121860 | 34.503 | 171 | 100 | 2 | 16 | 174 | 19 | 189 | 8.71e-22 | 87.8 |
| MS.gene85590.t1 | MTR_8g077540 | 39.583 | 96 | 58 | 0 | 19 | 114 | 18 | 113 | 5.06e-20 | 81.6 |
| MS.gene85590.t1 | MTR_1g068730 | 29.139 | 151 | 94 | 5 | 19 | 164 | 17 | 159 | 1.92e-11 | 60.1 |
| MS.gene85590.t1 | MTR_1g076590 | 67.500 | 40 | 13 | 0 | 122 | 161 | 8 | 47 | 2.44e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85590.t1 | AT3G22950 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.04e-121 | 341 |
| MS.gene85590.t1 | AT3G22950 | 89.503 | 181 | 19 | 0 | 1 | 181 | 1 | 181 | 1.04e-121 | 341 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G23490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G70490 | 52.486 | 181 | 86 | 0 | 1 | 181 | 1 | 181 | 3.59e-68 | 206 |
| MS.gene85590.t1 | AT1G10630 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.60e-67 | 203 |
| MS.gene85590.t1 | AT1G10630 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 2.60e-67 | 203 |
| MS.gene85590.t1 | AT5G14670 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.53e-67 | 203 |
| MS.gene85590.t1 | AT5G14670 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.53e-67 | 203 |
| MS.gene85590.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene85590.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene85590.t1 | AT3G62290 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 4.63e-67 | 203 |
| MS.gene85590.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene85590.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene85590.t1 | AT2G47170 | 51.934 | 181 | 87 | 0 | 1 | 181 | 1 | 181 | 5.11e-67 | 202 |
| MS.gene85590.t1 | AT5G14670 | 51.381 | 181 | 88 | 0 | 1 | 181 | 1 | 181 | 2.00e-66 | 201 |
| MS.gene85590.t1 | AT2G24765 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 1.97e-60 | 186 |
| MS.gene85590.t1 | AT5G17060 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.20e-60 | 185 |
| MS.gene85590.t1 | AT5G17060 | 48.851 | 174 | 89 | 0 | 1 | 174 | 1 | 174 | 5.20e-60 | 185 |
| MS.gene85590.t1 | AT2G15310 | 48.066 | 181 | 94 | 0 | 1 | 181 | 1 | 181 | 1.41e-59 | 184 |
| MS.gene85590.t1 | AT3G03120 | 49.425 | 174 | 88 | 0 | 1 | 174 | 1 | 174 | 1.99e-59 | 184 |
| MS.gene85590.t1 | AT2G24765 | 52.344 | 128 | 61 | 0 | 1 | 128 | 1 | 128 | 1.44e-44 | 144 |
| MS.gene85590.t1 | AT3G03120 | 50.000 | 130 | 65 | 0 | 1 | 130 | 1 | 130 | 2.50e-40 | 133 |
| MS.gene85590.t1 | AT2G18390 | 39.877 | 163 | 97 | 1 | 19 | 180 | 18 | 180 | 3.81e-40 | 134 |
| MS.gene85590.t1 | AT5G52210 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 1.99e-34 | 120 |
| MS.gene85590.t1 | AT5G52210 | 34.615 | 182 | 112 | 1 | 1 | 175 | 1 | 182 | 1.99e-34 | 120 |
| MS.gene85590.t1 | AT1G02430 | 36.216 | 185 | 104 | 5 | 1 | 173 | 1 | 183 | 4.28e-34 | 119 |
| MS.gene85590.t1 | AT1G02440 | 34.054 | 185 | 108 | 5 | 1 | 173 | 1 | 183 | 3.55e-31 | 112 |
| MS.gene85590.t1 | AT5G37680 | 36.620 | 142 | 89 | 1 | 12 | 152 | 14 | 155 | 4.96e-27 | 101 |
| MS.gene85590.t1 | AT1G02430 | 34.568 | 162 | 96 | 4 | 1 | 154 | 1 | 160 | 3.74e-26 | 98.2 |
| MS.gene85590.t1 | AT3G49870 | 35.811 | 148 | 82 | 2 | 12 | 152 | 14 | 155 | 2.56e-24 | 94.4 |
| MS.gene85590.t1 | AT5G67560 | 35.135 | 148 | 83 | 2 | 12 | 152 | 14 | 155 | 1.30e-23 | 92.4 |
| MS.gene85590.t1 | AT3G49860 | 34.043 | 141 | 92 | 1 | 13 | 152 | 7 | 147 | 1.48e-23 | 92.0 |
| MS.gene85590.t1 | AT3G62560 | 33.918 | 171 | 101 | 1 | 16 | 174 | 19 | 189 | 1.01e-22 | 90.1 |
| MS.gene85590.t1 | AT3G49870 | 35.461 | 141 | 78 | 2 | 19 | 152 | 2 | 136 | 1.84e-22 | 89.0 |
| MS.gene85590.t1 | AT5G37680 | 34.646 | 127 | 80 | 1 | 47 | 170 | 3 | 129 | 2.48e-22 | 87.8 |
| MS.gene85590.t1 | AT4G02080 | 33.333 | 171 | 102 | 1 | 16 | 174 | 19 | 189 | 4.43e-22 | 88.6 |
| MS.gene85590.t1 | AT1G56330 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 2.35e-21 | 86.7 |
| MS.gene85590.t1 | AT1G09180 | 40.000 | 130 | 78 | 0 | 16 | 145 | 19 | 148 | 5.40e-20 | 83.2 |
| MS.gene85590.t1 | AT1G02440 | 27.742 | 155 | 76 | 4 | 1 | 154 | 1 | 120 | 1.24e-14 | 67.4 |
Find 42 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAAGATGCAATTTATAA+AGG | 0.291513 | 1.3:-55039286 | None:intergenic |
| TCATTTCAGGTCTGGGATCT+TGG | 0.315908 | 1.3:+55044230 | MS.gene85590:intron |
| TGGATTGCCGGGCGAGTAAC+TGG | 0.364368 | 1.3:+55044560 | MS.gene85590:CDS |
| GATGGTCTTGGATGGATTGC+CGG | 0.370902 | 1.3:+55044548 | MS.gene85590:CDS |
| GAGTATAAGATTGTTGTTGT+TGG | 0.394215 | 1.3:+55039236 | MS.gene85590:CDS |
| ACCCTTTATAAATTGCATCT+TGG | 0.403617 | 1.3:+55039284 | MS.gene85590:CDS |
| ACAATCTTATACTCTTTAGC+AGG | 0.426577 | 1.3:-55039227 | None:intergenic |
| GACGGCCTTTATGATGGTCT+TGG | 0.432233 | 1.3:+55044536 | MS.gene85590:CDS |
| CAAGCTTGCAGCGCCCTCTC+AGG | 0.432795 | 1.3:+55044512 | MS.gene85590:CDS |
| ACCAAGATGCAATTTATAAA+GGG | 0.439345 | 1.3:-55039285 | None:intergenic |
| GGGCAATGATGTCTAGATTC+TGG | 0.443324 | 1.3:+55039192 | MS.gene85590:CDS |
| TAAGATTGTTGTTGTTGGAT+TGG | 0.448953 | 1.3:+55039241 | MS.gene85590:CDS |
| ATCCTTCATTAAAGAGATCC+TGG | 0.463726 | 1.3:-55044339 | None:intergenic |
| TCCATCCAAGACCATCATAA+AGG | 0.464813 | 1.3:-55044541 | None:intergenic |
| TGCTAATAAACAAGATATCA+AGG | 0.484675 | 1.3:+55044418 | MS.gene85590:CDS |
| TGCTTTGCCAGTTACTCGCC+CGG | 0.486271 | 1.3:-55044567 | None:intergenic |
| GCCTTTATGATGGTCTTGGA+TGG | 0.493098 | 1.3:+55044540 | MS.gene85590:CDS |
| AATATGTTGCCCATGATGTC+CGG | 0.496677 | 1.3:-55044268 | None:intergenic |
| AAGAAAGACTCCGGACATCA+TGG | 0.503977 | 1.3:+55044258 | MS.gene85590:CDS |
| ACAGCATCAAGGATCATGAT+TGG | 0.511844 | 1.3:+55044483 | MS.gene85590:CDS |
| TTTCAGGTCTGGGATCTTGG+CGG | 0.512294 | 1.3:+55044233 | MS.gene85590:intron |
| ATGGTCTTGGATGGATTGCC+GGG | 0.515323 | 1.3:+55044549 | MS.gene85590:CDS |
| AGAGCATCAGTGATTTCAGC+AGG | 0.529085 | 1.3:-55044452 | None:intergenic |
| TCAGGAGACGGCCTTTATGA+TGG | 0.533539 | 1.3:+55044530 | MS.gene85590:CDS |
| TGCAGCGCCCTCTCAGGAGA+CGG | 0.539815 | 1.3:+55044518 | MS.gene85590:CDS |
| AGCCAGGATCTCTTTAATGA+AGG | 0.547926 | 1.3:+55044337 | MS.gene85590:CDS |
| TCGACGTTGCTACCAACAGT+AGG | 0.548630 | 1.3:-55039326 | None:intergenic |
| TTATAAATTGCATCTTGGTG+AGG | 0.556104 | 1.3:+55039289 | MS.gene85590:CDS |
| TCGACAGCAGTGATAGAGCC+AGG | 0.557461 | 1.3:+55044321 | MS.gene85590:CDS |
| CATAAAGGCCGTCTCCTGAG+AGG | 0.561891 | 1.3:-55044526 | None:intergenic |
| CTTGTTTATTAGCAAAGACA+AGG | 0.566607 | 1.3:-55044409 | None:intergenic |
| CAATTACAGCATGAGTTCCT+CGG | 0.575990 | 1.3:-55044292 | None:intergenic |
| TCTGTCACTTCACAGCATCA+AGG | 0.579384 | 1.3:+55044472 | MS.gene85590:CDS |
| AGAAAGACTCCGGACATCAT+GGG | 0.590125 | 1.3:+55044259 | MS.gene85590:CDS |
| ATAAAGGCCGTCTCCTGAGA+GGG | 0.592089 | 1.3:-55044525 | None:intergenic |
| CGACGTTGCTACCAACAGTA+GGG | 0.595721 | 1.3:-55039325 | None:intergenic |
| AAGATGCAATTTATAAAGGG+TGG | 0.614125 | 1.3:-55039282 | None:intergenic |
| GTTACTACTAACCCTACTGT+TGG | 0.624128 | 1.3:+55039314 | MS.gene85590:CDS |
| TTGGCGGACAAGAAAGACTC+CGG | 0.636413 | 1.3:+55044249 | MS.gene85590:CDS |
| CAATCTTATACTCTTTAGCA+GGG | 0.643634 | 1.3:-55039226 | None:intergenic |
| GTTGTTGGATTGGATAACGC+TGG | 0.661294 | 1.3:+55039251 | MS.gene85590:CDS |
| TCATGGGCAACATATTACCG+AGG | 0.738917 | 1.3:+55044275 | MS.gene85590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATTTAATTGATATAA+TGG | - | chr1.3:55041460-55041479 | None:intergenic | 10.0% |
| !! | AAATTGTACTTAGAATTTAT+AGG | - | chr1.3:55040735-55040754 | None:intergenic | 15.0% |
| !! | AAGAAAATAGAAGATTAAAT+GGG | + | chr1.3:55040625-55040644 | MS.gene85590:intron | 15.0% |
| !! | AATTTACTATAGTAGTAAAA+TGG | - | chr1.3:55042543-55042562 | None:intergenic | 15.0% |
| !! | ACATAAGTTAAAAGAAAAAT+TGG | + | chr1.3:55039587-55039606 | MS.gene85590:intron | 15.0% |
| !! | ATATTCATATTTACTTCAAT+AGG | + | chr1.3:55041670-55041689 | MS.gene85590:intron | 15.0% |
| !! | GAATATACAAGATAATTATA+AGG | + | chr1.3:55039609-55039628 | MS.gene85590:intron | 15.0% |
| !! | TAAGAAAATAGAAGATTAAA+TGG | + | chr1.3:55040624-55040643 | MS.gene85590:intron | 15.0% |
| !!! | AAAATTTAGGTTGAAAAAAA+TGG | - | chr1.3:55043798-55043817 | None:intergenic | 15.0% |
| !! | AAAATCATAAAAACAAACTC+TGG | + | chr1.3:55041189-55041208 | MS.gene85590:intron | 20.0% |
| !! | AAAGATTGTTCCTTTATATT+TGG | + | chr1.3:55039650-55039669 | MS.gene85590:intron | 20.0% |
| !! | AATGATTCAACTCAATTAAT+TGG | - | chr1.3:55043083-55043102 | None:intergenic | 20.0% |
| !! | ACATCTTATGTAAATTCTAA+TGG | - | chr1.3:55040986-55041005 | None:intergenic | 20.0% |
| !! | AGTTATTCATGATCATAATA+TGG | + | chr1.3:55042445-55042464 | MS.gene85590:intron | 20.0% |
| !! | ATGATTCAACTCAATTAATT+GGG | - | chr1.3:55043082-55043101 | None:intergenic | 20.0% |
| !! | TATAGGATAAATAGTGTTAT+AGG | + | chr1.3:55039710-55039729 | MS.gene85590:intron | 20.0% |
| !! | TGTATATTTAAATGCAGATT+GGG | - | chr1.3:55042026-55042045 | None:intergenic | 20.0% |
| !! | TTAATTTATTTGTTCAACCT+GGG | - | chr1.3:55042972-55042991 | None:intergenic | 20.0% |
| !! | TTACACATTAACATGAATTT+GGG | + | chr1.3:55040404-55040423 | MS.gene85590:intron | 20.0% |
| !! | TTACTACATTTGAACTTATT+TGG | - | chr1.3:55041902-55041921 | None:intergenic | 20.0% |
| !! | TTGTATATTTAAATGCAGAT+TGG | - | chr1.3:55042027-55042046 | None:intergenic | 20.0% |
| !!! | AATTTTGTTAGGAAAAAATG+TGG | - | chr1.3:55042780-55042799 | None:intergenic | 20.0% |
| !!! | ATGTGTTTTTAAACTACATT+TGG | + | chr1.3:55044144-55044163 | MS.gene85590:intron | 20.0% |
| !!! | ATTTTAATTATTTTTCCCCT+TGG | - | chr1.3:55042745-55042764 | None:intergenic | 20.0% |
| !!! | ATTTTGTTAGGAAAAAATGT+GGG | - | chr1.3:55042779-55042798 | None:intergenic | 20.0% |
| !!! | GAAATTAATGCTTTGAAAAT+CGG | - | chr1.3:55043492-55043511 | None:intergenic | 20.0% |
| !!! | GTACCATTTAAATTTTCTTA+GGG | + | chr1.3:55043619-55043638 | MS.gene85590:intron | 20.0% |
| !!! | TGATGGATATACATATAATA+CGG | - | chr1.3:55040700-55040719 | None:intergenic | 20.0% |
| ! | AAAATGATGATAAACTGGTA+AGG | - | chr1.3:55039391-55039410 | None:intergenic | 25.0% |
| ! | AAAGAAAGACAACTTTAGAT+TGG | - | chr1.3:55040209-55040228 | None:intergenic | 25.0% |
| ! | AAATGATGATAAACTGGTAA+GGG | - | chr1.3:55039390-55039409 | None:intergenic | 25.0% |
| ! | AAGTAGCGTAATAGATTAAT+TGG | - | chr1.3:55040820-55040839 | None:intergenic | 25.0% |
| ! | AATTAATCTATTACGCTACT+TGG | + | chr1.3:55040819-55040838 | MS.gene85590:intron | 25.0% |
| ! | AATTTGATTGCTAGAATAGT+TGG | + | chr1.3:55040170-55040189 | MS.gene85590:intron | 25.0% |
| ! | ACCAAGATGCAATTTATAAA+GGG | - | chr1.3:55039288-55039307 | None:intergenic | 25.0% |
| ! | ACCTTATTGATAGAAGTTAA+GGG | + | chr1.3:55040248-55040267 | MS.gene85590:intron | 25.0% |
| ! | ACTGAGTACTAAATTAGAAA+AGG | - | chr1.3:55044093-55044112 | None:intergenic | 25.0% |
| ! | AGTAGCGTAATAGATTAATT+GGG | - | chr1.3:55040819-55040838 | None:intergenic | 25.0% |
| ! | ATACTATATTTATTCCAACG+TGG | - | chr1.3:55041085-55041104 | None:intergenic | 25.0% |
| ! | ATAGCAAAATGATGATAAAC+TGG | - | chr1.3:55039396-55039415 | None:intergenic | 25.0% |
| ! | ATTAGCAATATTCAGATTCT+AGG | + | chr1.3:55042560-55042579 | MS.gene85590:intron | 25.0% |
| ! | CAAATATTAGCGTTCATATT+TGG | + | chr1.3:55039532-55039551 | MS.gene85590:intron | 25.0% |
| ! | CTTAATTTATTTGTTCAACC+TGG | - | chr1.3:55042973-55042992 | None:intergenic | 25.0% |
| ! | CTTACACATTAACATGAATT+TGG | + | chr1.3:55040403-55040422 | MS.gene85590:intron | 25.0% |
| ! | TACTGAAGAAATTAAGATCA+AGG | + | chr1.3:55043050-55043069 | MS.gene85590:intron | 25.0% |
| ! | TAGCCCTAAGAAAATTTAAA+TGG | - | chr1.3:55043625-55043644 | None:intergenic | 25.0% |
| ! | TAGGTCATGATATTAGTATT+AGG | + | chr1.3:55042277-55042296 | MS.gene85590:intron | 25.0% |
| ! | TGACAAATATAATCACATTG+TGG | - | chr1.3:55040045-55040064 | None:intergenic | 25.0% |
| ! | TGATTCAACTCAATTAATTG+GGG | - | chr1.3:55043081-55043100 | None:intergenic | 25.0% |
| ! | TGCTAATAAACAAGATATCA+AGG | + | chr1.3:55044418-55044437 | MS.gene85590:CDS | 25.0% |
| ! | TTAAAGTGAGTAGAATTTGT+TGG | + | chr1.3:55043171-55043190 | MS.gene85590:intron | 25.0% |
| ! | TTTAAAAACACATGCATACA+TGG | - | chr1.3:55044137-55044156 | None:intergenic | 25.0% |
| ! | TTTACATATTGCATCCAATA+TGG | - | chr1.3:55041225-55041244 | None:intergenic | 25.0% |
| !! | AAAGATCAGAATTGTTACTT+CGG | - | chr1.3:55042374-55042393 | None:intergenic | 25.0% |
| !! | ATCACTGTTAAATTTTGCTA+CGG | + | chr1.3:55042998-55043017 | MS.gene85590:intron | 25.0% |
| !! | GGTACCATTTAAATTTTCTT+AGG | + | chr1.3:55043618-55043637 | MS.gene85590:intron | 25.0% |
| !! | TCATGATTTAATTGGTTCAA+CGG | - | chr1.3:55043439-55043458 | None:intergenic | 25.0% |
| !! | TTGTTGATCAAAGTTTTCAT+TGG | + | chr1.3:55039476-55039495 | MS.gene85590:intron | 25.0% |
| !! | TTTTTACCATTGAACTGTTT+TGG | + | chr1.3:55040092-55040111 | MS.gene85590:intron | 25.0% |
| !!! | AAATATGCTTGATATTTTGG+AGG | - | chr1.3:55042346-55042365 | None:intergenic | 25.0% |
| !!! | GCTTTTTTCTTAAATAGAGA+AGG | - | chr1.3:55041778-55041797 | None:intergenic | 25.0% |
| !!! | GTGCTGATTAGAAAAAATTT+AGG | - | chr1.3:55043811-55043830 | None:intergenic | 25.0% |
| !!! | TCTAAAGTTGTCTTTCTTTT+TGG | + | chr1.3:55040210-55040229 | MS.gene85590:intron | 25.0% |
| AAAAATGACCACCAAATGTT+TGG | - | chr1.3:55043325-55043344 | None:intergenic | 30.0% | |
| AAAATGACCACCAAATGTTT+GGG | - | chr1.3:55043324-55043343 | None:intergenic | 30.0% | |
| AAAATGCACATCTCCATATT+AGG | - | chr1.3:55040306-55040325 | None:intergenic | 30.0% | |
| AAATGCACATCTCCATATTA+GGG | - | chr1.3:55040305-55040324 | None:intergenic | 30.0% | |
| AACATTGGTAAAAATTGTCC+AGG | - | chr1.3:55042602-55042621 | None:intergenic | 30.0% | |
| AACTTTGTATAGAAGTTGTG+TGG | + | chr1.3:55039928-55039947 | MS.gene85590:intron | 30.0% | |
| AAGACTAAGAGAAAGTAAAG+AGG | - | chr1.3:55041148-55041167 | None:intergenic | 30.0% | |
| AAGATGCAATTTATAAAGGG+TGG | - | chr1.3:55039285-55039304 | None:intergenic | 30.0% | |
| AATATACAACATTATCAGCG+TGG | + | chr1.3:55042038-55042057 | MS.gene85590:intron | 30.0% | |
| ACAATCTTATACTCTTTAGC+AGG | - | chr1.3:55039230-55039249 | None:intergenic | 30.0% | |
| ACCACAACAACCAAATATAA+AGG | - | chr1.3:55039663-55039682 | None:intergenic | 30.0% | |
| ACCCTTTATAAATTGCATCT+TGG | + | chr1.3:55039284-55039303 | MS.gene85590:CDS | 30.0% | |
| AGACTAAGAGAAAGTAAAGA+GGG | - | chr1.3:55041147-55041166 | None:intergenic | 30.0% | |
| AGGATAAATAGTGTTATAGG+CGG | + | chr1.3:55039713-55039732 | MS.gene85590:intron | 30.0% | |
| ATATGTAAATGTAAGGCTAC+TGG | + | chr1.3:55041236-55041255 | MS.gene85590:intron | 30.0% | |
| ATTCTCTTTGTGATAGTCAT+TGG | - | chr1.3:55042136-55042155 | None:intergenic | 30.0% | |
| ATTGATCTGAACCAAAAACA+GGG | + | chr1.3:55041103-55041122 | MS.gene85590:intron | 30.0% | |
| CAATCTTATACTCTTTAGCA+GGG | - | chr1.3:55039229-55039248 | None:intergenic | 30.0% | |
| CACAAAATTAAAGATGCTGT+GGG | - | chr1.3:55040357-55040376 | None:intergenic | 30.0% | |
| CACAAAGAGAATTGAGTATT+TGG | + | chr1.3:55042144-55042163 | MS.gene85590:intron | 30.0% | |
| CACCAAGATGCAATTTATAA+AGG | - | chr1.3:55039289-55039308 | None:intergenic | 30.0% | |
| CACCTTATTGATAGAAGTTA+AGG | + | chr1.3:55040247-55040266 | MS.gene85590:intron | 30.0% | |
| CCTTATTGATAGAAGTTAAG+GGG | + | chr1.3:55040249-55040268 | MS.gene85590:intron | 30.0% | |
| CTCTATTTAAGAAAAAAGCC+TGG | + | chr1.3:55041779-55041798 | MS.gene85590:intron | 30.0% | |
| CTTCTGGATCATGATTTAAT+TGG | - | chr1.3:55043447-55043466 | None:intergenic | 30.0% | |
| CTTGTTTATTAGCAAAGACA+AGG | - | chr1.3:55044412-55044431 | None:intergenic | 30.0% | |
| CTTTAAATCACAGCTAAAAC+AGG | - | chr1.3:55043157-55043176 | None:intergenic | 30.0% | |
| GAGAGAGAATCTAATTTCAT+GGG | - | chr1.3:55041977-55041996 | None:intergenic | 30.0% | |
| GATTCAACTCAATTAATTGG+GGG | - | chr1.3:55043080-55043099 | None:intergenic | 30.0% | |
| GCTTAGGCCTTAAAAAAATT+TGG | - | chr1.3:55041325-55041344 | None:intergenic | 30.0% | |
| GCTTATTGGAATACATTGTT+GGG | + | chr1.3:55043995-55044014 | MS.gene85590:intron | 30.0% | |
| GGATGCAATATGTAAATGTA+AGG | + | chr1.3:55041229-55041248 | MS.gene85590:intron | 30.0% | |
| TACTAATATCATGACCTATC+AGG | - | chr1.3:55042275-55042294 | None:intergenic | 30.0% | |
| TAGAAAAGGATAATGCTTAC+TGG | - | chr1.3:55044079-55044098 | None:intergenic | 30.0% | |
| TAGATGTAAGTCCTTAAAGA+CGG | - | chr1.3:55039991-55040010 | None:intergenic | 30.0% | |
| TATTGATCTGAACCAAAAAC+AGG | + | chr1.3:55041102-55041121 | MS.gene85590:intron | 30.0% | |
| TCATATTTACTTCAATAGGC+CGG | + | chr1.3:55041674-55041693 | MS.gene85590:intron | 30.0% | |
| TCCTTTATATTTGGTTGTTG+TGG | + | chr1.3:55039659-55039678 | MS.gene85590:intron | 30.0% | |
| TCGAATTTGTCATTCATTTC+AGG | + | chr1.3:55044217-55044236 | MS.gene85590:intron | 30.0% | |
| TGCTTATTGGAATACATTGT+TGG | + | chr1.3:55043994-55044013 | MS.gene85590:intron | 30.0% | |
| TGGCAATCTAATATGATTCA+AGG | - | chr1.3:55042523-55042542 | None:intergenic | 30.0% | |
| TTATAAATTGCATCTTGGTG+AGG | + | chr1.3:55039289-55039308 | MS.gene85590:CDS | 30.0% | |
| TTGTGCAAAATAGTAAAGCT+AGG | - | chr1.3:55044182-55044201 | None:intergenic | 30.0% | |
| TTTAAGGACTTACATCTAGA+GGG | + | chr1.3:55039993-55040012 | MS.gene85590:intron | 30.0% | |
| TTTCTAACTAGCTGTTTAGA+TGG | - | chr1.3:55042683-55042702 | None:intergenic | 30.0% | |
| ! | AGAAGCCTATTTAGCTTAAA+AGG | - | chr1.3:55041742-55041761 | None:intergenic | 30.0% |
| ! | GAGTATAAGATTGTTGTTGT+TGG | + | chr1.3:55039236-55039255 | MS.gene85590:CDS | 30.0% |
| ! | GGGAAATATGCTTGATATTT+TGG | - | chr1.3:55042349-55042368 | None:intergenic | 30.0% |
| ! | GTTGAATCATTGATAGTTGA+AGG | + | chr1.3:55043092-55043111 | MS.gene85590:intron | 30.0% |
| ! | TAAGATTGTTGTTGTTGGAT+TGG | + | chr1.3:55039241-55039260 | MS.gene85590:CDS | 30.0% |
| ! | TAATATGGAGATGTGCATTT+TGG | + | chr1.3:55040305-55040324 | MS.gene85590:intron | 30.0% |
| ! | TAATGAAGGATGAACTTTTC+AGG | + | chr1.3:55044351-55044370 | MS.gene85590:CDS | 30.0% |
| ! | TATCAATAAGGTGTTCTCAA+TGG | - | chr1.3:55040240-55040259 | None:intergenic | 30.0% |
| ! | TTTTATGATTTTTCCTCGCA+AGG | - | chr1.3:55041181-55041200 | None:intergenic | 30.0% |
| ! | TTTTTAAACTACATTTGGCG+CGG | + | chr1.3:55044149-55044168 | MS.gene85590:intron | 30.0% |
| !! | GACACTTTCTTTTTGAAGAA+CGG | - | chr1.3:55040023-55040042 | None:intergenic | 30.0% |
| !!! | ATTTGGTGGTCATTTTTTAG+TGG | + | chr1.3:55043328-55043347 | MS.gene85590:intron | 30.0% |
| !!! | TTAGGGGATATTTTGTTTTG+TGG | + | chr1.3:55043233-55043252 | MS.gene85590:intron | 30.0% |
| !!! | TTCATTGCATTTTTTCAGCT+TGG | - | chr1.3:55043356-55043375 | None:intergenic | 30.0% |
| !!! | TTGGTTTTACTTTGTTGTCA+GGG | + | chr1.3:55039797-55039816 | MS.gene85590:intron | 30.0% |
| !!! | TTTGGTGGTCATTTTTTAGT+GGG | + | chr1.3:55043329-55043348 | MS.gene85590:intron | 30.0% |
| AAGAACCAAGATTTGTAGCA+TGG | - | chr1.3:55042890-55042909 | None:intergenic | 35.0% | |
| AATATCATGACCTATCAGGA+GGG | - | chr1.3:55042271-55042290 | None:intergenic | 35.0% | |
| ACACTTGAGTGTAAGATCTA+TGG | + | chr1.3:55039770-55039789 | MS.gene85590:intron | 35.0% | |
| ACCAACATCATTTGGATTGA+TGG | - | chr1.3:55040487-55040506 | None:intergenic | 35.0% | |
| ACCATCAATCCAAATGATGT+TGG | + | chr1.3:55040483-55040502 | MS.gene85590:intron | 35.0% | |
| ACTATAGCAGCAATGAAGAT+TGG | - | chr1.3:55039954-55039973 | None:intergenic | 35.0% | |
| AGATTGCTACCAACATCATT+TGG | - | chr1.3:55040495-55040514 | None:intergenic | 35.0% | |
| AGCGTAATAGATTAATTGGG+TGG | - | chr1.3:55040816-55040835 | None:intergenic | 35.0% | |
| AGGCCTTAAAAAAATTTGGC+AGG | - | chr1.3:55041321-55041340 | None:intergenic | 35.0% | |
| AGTGGATCAGCAATAAAAGA+TGG | + | chr1.3:55040593-55040612 | MS.gene85590:intron | 35.0% | |
| ATATAATACGGCAAGAGAGT+TGG | - | chr1.3:55040688-55040707 | None:intergenic | 35.0% | |
| ATCCTTCATTAAAGAGATCC+TGG | - | chr1.3:55044342-55044361 | None:intergenic | 35.0% | |
| ATGATTAGAATCATGAGCAG+TGG | + | chr1.3:55039847-55039866 | MS.gene85590:intron | 35.0% | |
| ATGTAGTAAGATCCATATCC+CGG | + | chr1.3:55041913-55041932 | MS.gene85590:intron | 35.0% | |
| ATTGCTAGATCTAGTGAAAC+CGG | - | chr1.3:55041935-55041954 | None:intergenic | 35.0% | |
| ATTGTTGTCGTAGTTAGGTT+AGG | + | chr1.3:55043199-55043218 | MS.gene85590:intron | 35.0% | |
| CAGTTCGATCATGAAAACAT+TGG | - | chr1.3:55042617-55042636 | None:intergenic | 35.0% | |
| CCACAAAATTAAAGATGCTG+TGG | - | chr1.3:55040358-55040377 | None:intergenic | 35.0% | |
| CCATGAGAAGATTGTTTATG+AGG | - | chr1.3:55041024-55041043 | None:intergenic | 35.0% | |
| CCCCTTAACTTCTATCAATA+AGG | - | chr1.3:55040252-55040271 | None:intergenic | 35.0% | |
| CCTCAAGAAAATATTCTCCA+AGG | - | chr1.3:55040443-55040462 | None:intergenic | 35.0% | |
| CCTCATAAACAATCTTCTCA+TGG | + | chr1.3:55041021-55041040 | MS.gene85590:intron | 35.0% | |
| CTAAAAAGTAAGCCTATGAC+AGG | - | chr1.3:55041359-55041378 | None:intergenic | 35.0% | |
| GAACGCTAATATTTGCTTGA+GGG | - | chr1.3:55039527-55039546 | None:intergenic | 35.0% | |
| GAATCCTGAGGTATATCAAA+GGG | - | chr1.3:55042100-55042119 | None:intergenic | 35.0% | |
| GATCACATTGCTTATTTAGC+AGG | - | chr1.3:55041415-55041434 | None:intergenic | 35.0% | |
| GATCTTTGCTTGCGTAATTT+GGG | + | chr1.3:55042387-55042406 | MS.gene85590:intron | 35.0% | |
| GATTTATGAGCCCAAACATT+TGG | + | chr1.3:55043311-55043330 | MS.gene85590:intron | 35.0% | |
| GATTTATGCTGTAAGCTCAT+TGG | - | chr1.3:55042316-55042335 | None:intergenic | 35.0% | |
| GGAGAGAGAATCTAATTTCA+TGG | - | chr1.3:55041978-55041997 | None:intergenic | 35.0% | |
| GGTACAATATAAGATACCCT+CGG | + | chr1.3:55040925-55040944 | MS.gene85590:intron | 35.0% | |
| GTAATTTGGGTCTTTACACT+CGG | + | chr1.3:55042400-55042419 | MS.gene85590:intron | 35.0% | |
| GTACAATATAAGATACCCTC+GGG | + | chr1.3:55040926-55040945 | MS.gene85590:intron | 35.0% | |
| GTATATCAAAGGGTCTCAAA+GGG | - | chr1.3:55042090-55042109 | None:intergenic | 35.0% | |
| TAATATCATGACCTATCAGG+AGG | - | chr1.3:55042272-55042291 | None:intergenic | 35.0% | |
| TACTTCTCTTGTAAGAAGCT+TGG | + | chr1.3:55043512-55043531 | MS.gene85590:intron | 35.0% | |
| TATTTATACAGAGCTGAAGC+TGG | - | chr1.3:55042491-55042510 | None:intergenic | 35.0% | |
| TCATCTCAAAAGAGACTTGT+TGG | + | chr1.3:55041866-55041885 | MS.gene85590:intron | 35.0% | |
| TCCACAACAATGATGACAAA+GGG | + | chr1.3:55042167-55042186 | MS.gene85590:intron | 35.0% | |
| TGAACGCTAATATTTGCTTG+AGG | - | chr1.3:55039528-55039547 | None:intergenic | 35.0% | |
| TGAATCCTGAGGTATATCAA+AGG | - | chr1.3:55042101-55042120 | None:intergenic | 35.0% | |
| TGATCTTTGCTTGCGTAATT+TGG | + | chr1.3:55042386-55042405 | MS.gene85590:intron | 35.0% | |
| TGGTGAGTGGTAGTAAATAA+AGG | - | chr1.3:55043549-55043568 | None:intergenic | 35.0% | |
| TTAAAAAAATTTGGCAGGCC+AGG | - | chr1.3:55041316-55041335 | None:intergenic | 35.0% | |
| TTCTTAAATAGAGAAGGCCT+AGG | - | chr1.3:55041772-55041791 | None:intergenic | 35.0% | |
| TTGTTGTCGTAGTTAGGTTA+GGG | + | chr1.3:55043200-55043219 | MS.gene85590:intron | 35.0% | |
| TTTATTCCAACGTGGACATA+CGG | - | chr1.3:55041077-55041096 | None:intergenic | 35.0% | |
| ! | ATAGGCTTCTAAAAAAGCCT+AGG | + | chr1.3:55041752-55041771 | MS.gene85590:intron | 35.0% |
| ! | ATGTTTTCACCAAGTCTCTA+AGG | - | chr1.3:55040952-55040971 | None:intergenic | 35.0% |
| ! | ATTTTGTGGAGTTTAAGTCG+TGG | + | chr1.3:55040369-55040388 | MS.gene85590:intron | 35.0% |
| ! | CAATGTTTTCATGATCGAAC+TGG | + | chr1.3:55042615-55042634 | MS.gene85590:intron | 35.0% |
| ! | CAGTCTGACGAAATTTTGTT+AGG | - | chr1.3:55042791-55042810 | None:intergenic | 35.0% |
| ! | CCTTGGAGAATATTTTCTTG+AGG | + | chr1.3:55040440-55040459 | MS.gene85590:intron | 35.0% |
| ! | CTACAAAAACATTCGATTCG+AGG | + | chr1.3:55039358-55039377 | MS.gene85590:CDS | 35.0% |
| ! | CTTTAAGGACTTACATCTAG+AGG | + | chr1.3:55039992-55040011 | MS.gene85590:intron | 35.0% |
| ! | GGGTGTTTCTAAATGAACAT+GGG | + | chr1.3:55043597-55043616 | MS.gene85590:intron | 35.0% |
| ! | GTGTAAGATCTATGGTTTGT+TGG | + | chr1.3:55039778-55039797 | MS.gene85590:intron | 35.0% |
| ! | TGGGTGTTTCTAAATGAACA+TGG | + | chr1.3:55043596-55043615 | MS.gene85590:intron | 35.0% |
| ! | TTGTCATTCATTTCAGGTCT+GGG | + | chr1.3:55044223-55044242 | MS.gene85590:intron | 35.0% |
| ! | TTTGTCATTCATTTCAGGTC+TGG | + | chr1.3:55044222-55044241 | MS.gene85590:intron | 35.0% |
| !! | AATTATTTTTCCCCTTGGAC+AGG | - | chr1.3:55042740-55042759 | None:intergenic | 35.0% |
| !! | AGTGAGTAGAATTTGTTGGA+TGG | + | chr1.3:55043175-55043194 | MS.gene85590:intron | 35.0% |
| !! | ATAGGCTTCTCTATTTCTGA+TGG | - | chr1.3:55040717-55040736 | None:intergenic | 35.0% |
| !! | ATGTGTACATTGCTTTTGAG+AGG | + | chr1.3:55040067-55040086 | MS.gene85590:intron | 35.0% |
| !! | CCACAGCATCTTTAATTTTG+TGG | + | chr1.3:55040355-55040374 | MS.gene85590:intron | 35.0% |
| !! | CTCGGCTATTATTAACTTGT+AGG | - | chr1.3:55041999-55042018 | None:intergenic | 35.0% |
| !! | TAAGCTCATTGGTTCACATA+CGG | - | chr1.3:55042305-55042324 | None:intergenic | 35.0% |
| !! | TTGTGGTTTGTTAACCATCA+GGG | + | chr1.3:55039676-55039695 | MS.gene85590:intron | 35.0% |
| !!! | AAGTCTCTTTTGAGATGACT+AGG | - | chr1.3:55041864-55041883 | None:intergenic | 35.0% |
| !!! | AGTCTCTTTTGAGATGACTA+GGG | - | chr1.3:55041863-55041882 | None:intergenic | 35.0% |
| !!! | ATTTTTTTAAGGCCTAAGCC+TGG | + | chr1.3:55041326-55041345 | MS.gene85590:intron | 35.0% |
| !!! | CTGTCATAGGCTTACTTTTT+AGG | + | chr1.3:55041357-55041376 | MS.gene85590:intron | 35.0% |
| !!! | GTCATACACTTGTTTTGTCT+TGG | - | chr1.3:55040546-55040565 | None:intergenic | 35.0% |
| !!! | GTTGGTTTTACTTTGTTGTC+AGG | + | chr1.3:55039796-55039815 | MS.gene85590:intron | 35.0% |
| !!! | TGGCCTGCCAAATTTTTTTA+AGG | + | chr1.3:55041315-55041334 | MS.gene85590:intron | 35.0% |
| !!! | TTGGTGGTCATTTTTTAGTG+GGG | + | chr1.3:55043330-55043349 | MS.gene85590:intron | 35.0% |
| AAAACGATTGAGAGGGACAT+AGG | - | chr1.3:55042818-55042837 | None:intergenic | 40.0% | |
| AAAAGCCTCTTAGGCCTATT+AGG | - | chr1.3:55041700-55041719 | None:intergenic | 40.0% | |
| AAACGATTGAGAGGGACATA+GGG | - | chr1.3:55042817-55042836 | None:intergenic | 40.0% | |
| AAGATCGAAAGCCAAAATCG+TGG | - | chr1.3:55043569-55043588 | None:intergenic | 40.0% | |
| AAGTGTATGACAGTGTTTCC+AGG | + | chr1.3:55040555-55040574 | MS.gene85590:intron | 40.0% | |
| AATATGTTGCCCATGATGTC+CGG | - | chr1.3:55044271-55044290 | None:intergenic | 40.0% | |
| AATCATGAGCAGTGGCTATA+GGG | + | chr1.3:55039855-55039874 | MS.gene85590:intron | 40.0% | |
| AATGTCACACTCATCAAGCT+TGG | + | chr1.3:55040904-55040923 | MS.gene85590:intron | 40.0% | |
| ACAGCATCAAGGATCATGAT+TGG | + | chr1.3:55044483-55044502 | MS.gene85590:CDS | 40.0% | |
| ACCCTTTGTCATCATTGTTG+TGG | - | chr1.3:55042171-55042190 | None:intergenic | 40.0% | |
| AGATGAATGGCCTATACCTT+GGG | + | chr1.3:55040124-55040143 | MS.gene85590:intron | 40.0% | |
| AGCCAGGATCTCTTTAATGA+AGG | + | chr1.3:55044337-55044356 | MS.gene85590:CDS | 40.0% | |
| ATACCAATTCTTCTCCCTGA+TGG | - | chr1.3:55039693-55039712 | None:intergenic | 40.0% | |
| ATATCATGACCTATCAGGAG+GGG | - | chr1.3:55042270-55042289 | None:intergenic | 40.0% | |
| ATCATGGTGTGAAAACTGTG+TGG | - | chr1.3:55042940-55042959 | None:intergenic | 40.0% | |
| ATGCAATAGCTTGAATCCTG+AGG | - | chr1.3:55042112-55042131 | None:intergenic | 40.0% | |
| ATGGCATTGTTGTCGTAGTT+AGG | + | chr1.3:55043194-55043213 | MS.gene85590:intron | 40.0% | |
| ATTTGTAGCATGGAACAGCA+TGG | - | chr1.3:55042880-55042899 | None:intergenic | 40.0% | |
| CAAAGACAAGGAGGAAACTA+TGG | + | chr1.3:55039739-55039758 | MS.gene85590:intron | 40.0% | |
| CAATTACAGCATGAGTTCCT+CGG | - | chr1.3:55044295-55044314 | None:intergenic | 40.0% | |
| CATACAATAGCGCTGCTTAT+TGG | + | chr1.3:55043981-55044000 | MS.gene85590:intron | 40.0% | |
| CATCTACCATGGTCTGAAAA+GGG | + | chr1.3:55042241-55042260 | MS.gene85590:intron | 40.0% | |
| CTGGTCATTGAAGACCATAT+TGG | + | chr1.3:55041208-55041227 | MS.gene85590:intron | 40.0% | |
| CTGTTCCATGCTACAAATCT+TGG | + | chr1.3:55042882-55042901 | MS.gene85590:intron | 40.0% | |
| GAGGAAGAAAACGATTGAGA+GGG | - | chr1.3:55042825-55042844 | None:intergenic | 40.0% | |
| GGATCAGTCTATGAGAAAAG+AGG | - | chr1.3:55042064-55042083 | None:intergenic | 40.0% | |
| GGTAGTCCAAAACAGTTCAA+TGG | - | chr1.3:55040101-55040120 | None:intergenic | 40.0% | |
| GGTATATCAAAGGGTCTCAA+AGG | - | chr1.3:55042091-55042110 | None:intergenic | 40.0% | |
| GTCCACAACAATGATGACAA+AGG | + | chr1.3:55042166-55042185 | MS.gene85590:intron | 40.0% | |
| GTTACTACTAACCCTACTGT+TGG | + | chr1.3:55039314-55039333 | MS.gene85590:CDS | 40.0% | |
| GTTGATCTTGCTTGCTTCTA+GGG | + | chr1.3:55039429-55039448 | MS.gene85590:intron | 40.0% | |
| TAACCATCAGGGAGAAGAAT+TGG | + | chr1.3:55039687-55039706 | MS.gene85590:intron | 40.0% | |
| TAGTTAGGTTAGGGTTGGAT+TGG | + | chr1.3:55043209-55043228 | MS.gene85590:intron | 40.0% | |
| TCAGGGAGAAGAATTGGTAT+AGG | + | chr1.3:55039693-55039712 | MS.gene85590:intron | 40.0% | |
| TCCATCCAAGACCATCATAA+AGG | - | chr1.3:55044544-55044563 | None:intergenic | 40.0% | |
| TGAGGAAGAAAACGATTGAG+AGG | - | chr1.3:55042826-55042845 | None:intergenic | 40.0% | |
| TGCTATAGTTGCAACCTGAT+TGG | + | chr1.3:55039965-55039984 | MS.gene85590:intron | 40.0% | |
| TGGGATATTATCAGTCACCT+TGG | + | chr1.3:55040423-55040442 | MS.gene85590:intron | 40.0% | |
| TGTTGATCTTGCTTGCTTCT+AGG | + | chr1.3:55039428-55039447 | MS.gene85590:intron | 40.0% | |
| TTATGAGCCCAAACATTTGG+TGG | + | chr1.3:55043314-55043333 | MS.gene85590:intron | 40.0% | |
| TTGCTAGATCTAGTGAAACC+GGG | - | chr1.3:55041934-55041953 | None:intergenic | 40.0% | |
| TTGGACTACCATGAGATGAA+TGG | + | chr1.3:55040111-55040130 | MS.gene85590:intron | 40.0% | |
| TTTAAGAAAAAAGCCTGGCC+TGG | + | chr1.3:55041784-55041803 | MS.gene85590:intron | 40.0% | |
| ! | ATCAGAATTGTTACTTCGGC+GGG | - | chr1.3:55042370-55042389 | None:intergenic | 40.0% |
| ! | ATCGTGCTCCTCAATTTTGT+TGG | - | chr1.3:55043756-55043775 | None:intergenic | 40.0% |
| ! | CCTATTTAGCTTAAAAGGCC+AGG | - | chr1.3:55041737-55041756 | None:intergenic | 40.0% |
| ! | CTGTTAAATTTTGCTACGGC+TGG | + | chr1.3:55043002-55043021 | MS.gene85590:intron | 40.0% |
| ! | GATCAGAATTGTTACTTCGG+CGG | - | chr1.3:55042371-55042390 | None:intergenic | 40.0% |
| !! | AAGCTCATTGGTTCACATAC+GGG | - | chr1.3:55042304-55042323 | None:intergenic | 40.0% |
| !! | CCTGGCCTTTTAAGCTAAAT+AGG | + | chr1.3:55041734-55041753 | MS.gene85590:intron | 40.0% |
| !! | GTTAGGGTTGGATTGGTTTA+GGG | + | chr1.3:55043216-55043235 | MS.gene85590:intron | 40.0% |
| !! | GTTGTGGTTTGTTAACCATC+AGG | + | chr1.3:55039675-55039694 | MS.gene85590:intron | 40.0% |
| !! | TTAGGGTTGGATTGGTTTAG+GGG | + | chr1.3:55043217-55043236 | MS.gene85590:intron | 40.0% |
| !!! | CCTGTACCAGTTTTGGAAAA+CGG | + | chr1.3:55042713-55042732 | MS.gene85590:intron | 40.0% |
| !!! | CTTTTGAGATGACTAGGGAT+GGG | - | chr1.3:55041858-55041877 | None:intergenic | 40.0% |
| !!! | GAGTCCTCTTGTTTTGAAGA+GGG | + | chr1.3:55043681-55043700 | MS.gene85590:intron | 40.0% |
| !!! | GATGAACTTTTCAGGTTGCT+GGG | + | chr1.3:55044359-55044378 | MS.gene85590:CDS | 40.0% |
| !!! | TCTTTTGAGATGACTAGGGA+TGG | - | chr1.3:55041859-55041878 | None:intergenic | 40.0% |
| !!! | TGAGTCCTCTTGTTTTGAAG+AGG | + | chr1.3:55043680-55043699 | MS.gene85590:intron | 40.0% |
| !!! | TTACTTTTTAGGCCTGAGTC+TGG | + | chr1.3:55041368-55041387 | MS.gene85590:intron | 40.0% |
| !!! | TTGGCTGCACTGTGTTTTTT+GGG | - | chr1.3:55043737-55043756 | None:intergenic | 40.0% |
| AAACAGGGCAGCTCAAACAA+AGG | + | chr1.3:55041118-55041137 | MS.gene85590:intron | 45.0% | |
| AAAGCCAAAATCGTGGTGAG+TGG | - | chr1.3:55043562-55043581 | None:intergenic | 45.0% | |
| AAATGCAGATTGGGTCAGCT+CGG | - | chr1.3:55042017-55042036 | None:intergenic | 45.0% | |
| AAGAAAGACTCCGGACATCA+TGG | + | chr1.3:55044258-55044277 | MS.gene85590:CDS | 45.0% | |
| AAGGCTACTGGTCATCTCTA+GGG | + | chr1.3:55041248-55041267 | MS.gene85590:intron | 45.0% | |
| AGAAAGACTCCGGACATCAT+GGG | + | chr1.3:55044259-55044278 | MS.gene85590:CDS | 45.0% | |
| AGATGACTAGGGATGGGAAT+AGG | - | chr1.3:55041852-55041871 | None:intergenic | 45.0% | |
| CAGTGCAGCCAACAAAATTG+AGG | + | chr1.3:55043745-55043764 | MS.gene85590:intron | 45.0% | |
| CCAATCTTCACCATCTACCA+TGG | + | chr1.3:55042230-55042249 | MS.gene85590:intron | 45.0% | |
| CCATCTACCATGGTCTGAAA+AGG | + | chr1.3:55042240-55042259 | MS.gene85590:intron | 45.0% | |
| CCATGGTAGATGGTGAAGAT+TGG | - | chr1.3:55042233-55042252 | None:intergenic | 45.0% | |
| CTTATCATAGTTGCCTTGCG+AGG | + | chr1.3:55041165-55041184 | MS.gene85590:intron | 45.0% | |
| CTTATTTAGCAGGCCGTATC+AGG | - | chr1.3:55041405-55041424 | None:intergenic | 45.0% | |
| CTTGTAAGAAGCTTGGCTAC+AGG | + | chr1.3:55043519-55043538 | MS.gene85590:intron | 45.0% | |
| GAATCATGAGCAGTGGCTAT+AGG | + | chr1.3:55039854-55039873 | MS.gene85590:intron | 45.0% | |
| GACAAACGCGATCCCTAATA+TGG | + | chr1.3:55040290-55040309 | MS.gene85590:intron | 45.0% | |
| GAGACCCTTTGATATACCTC+AGG | + | chr1.3:55042093-55042112 | MS.gene85590:intron | 45.0% | |
| GAGATGAATGGCCTATACCT+TGG | + | chr1.3:55040123-55040142 | MS.gene85590:intron | 45.0% | |
| GATCAAACCACTGAAGCTTC+TGG | - | chr1.3:55043463-55043482 | None:intergenic | 45.0% | |
| GATCTAGTGAAACCGGGATA+TGG | - | chr1.3:55041928-55041947 | None:intergenic | 45.0% | |
| GCTTTCGATCTTGCTTGCTT+GGG | + | chr1.3:55043577-55043596 | MS.gene85590:intron | 45.0% | |
| GGCCATTCAAAAAGCCTCTT+AGG | - | chr1.3:55041709-55041728 | None:intergenic | 45.0% | |
| GGGACGAACATTGCAATTTG+TGG | - | chr1.3:55040337-55040356 | None:intergenic | 45.0% | |
| GGGCAATGATGTCTAGATTC+TGG | + | chr1.3:55039192-55039211 | MS.gene85590:CDS | 45.0% | |
| GGGTATGTCAAGTCTAGTCA+CGG | + | chr1.3:55042187-55042206 | MS.gene85590:intron | 45.0% | |
| GGTAGATGGTGAAGATTGGT+TGG | - | chr1.3:55042229-55042248 | None:intergenic | 45.0% | |
| GGTATAGGCCATTCATCTCA+TGG | - | chr1.3:55040122-55040141 | None:intergenic | 45.0% | |
| GTCCCACTTTCCACAATACA+CGG | + | chr1.3:55043920-55043939 | MS.gene85590:intron | 45.0% | |
| GTGTGACATTTACACCAGCT+TGG | - | chr1.3:55040894-55040913 | None:intergenic | 45.0% | |
| GTTGAAGGTTTGCGATCTGT+TGG | + | chr1.3:55043107-55043126 | MS.gene85590:intron | 45.0% | |
| TAAGGCTACTGGTCATCTCT+AGG | + | chr1.3:55041247-55041266 | MS.gene85590:intron | 45.0% | |
| TATAGGCGGTGACAAAGACA+AGG | + | chr1.3:55039727-55039746 | MS.gene85590:intron | 45.0% | |
| TCAAAGGGTCTCAAAGGGAA+AGG | - | chr1.3:55042085-55042104 | None:intergenic | 45.0% | |
| TCATGATCCAGAAGCTTCAG+TGG | + | chr1.3:55043453-55043472 | MS.gene85590:intron | 45.0% | |
| TCATGGGCAACATATTACCG+AGG | + | chr1.3:55044275-55044294 | MS.gene85590:CDS | 45.0% | |
| TCCCACTTTCCACAATACAC+GGG | + | chr1.3:55043921-55043940 | MS.gene85590:intron | 45.0% | |
| TGACATTTACACCAGCTTGG+AGG | - | chr1.3:55040891-55040910 | None:intergenic | 45.0% | |
| TGGCTATAGGGTTTGATCGT+GGG | + | chr1.3:55039867-55039886 | MS.gene85590:intron | 45.0% | |
| TGTCGTAGTTAGGTTAGGGT+TGG | + | chr1.3:55043204-55043223 | MS.gene85590:intron | 45.0% | |
| TTGCTGGGTAAGAGCTAGTT+TGG | + | chr1.3:55040147-55040166 | MS.gene85590:intron | 45.0% | |
| TTTGTCCCAAATCCTGCTGA+TGG | - | chr1.3:55040276-55040295 | None:intergenic | 45.0% | |
| ! | AACCTGATTGGCCGTCTTTA+AGG | + | chr1.3:55039977-55039996 | MS.gene85590:intron | 45.0% |
| ! | ACAGGACCGTTTTCCAAAAC+TGG | - | chr1.3:55042722-55042741 | None:intergenic | 45.0% |
| ! | ACTACCACTCACCACGATTT+TGG | + | chr1.3:55043555-55043574 | MS.gene85590:intron | 45.0% |
| ! | ACTTTGTTGTCAGGGTGACA+TGG | + | chr1.3:55039805-55039824 | MS.gene85590:intron | 45.0% |
| ! | AGAGCATCAGTGATTTCAGC+AGG | - | chr1.3:55044455-55044474 | None:intergenic | 45.0% |
| ! | CCGTTTTCCAAAACTGGTAC+AGG | - | chr1.3:55042716-55042735 | None:intergenic | 45.0% |
| ! | CCTTTTCAGACCATGGTAGA+TGG | - | chr1.3:55042243-55042262 | None:intergenic | 45.0% |
| ! | GCCTTTATGATGGTCTTGGA+TGG | + | chr1.3:55044540-55044559 | MS.gene85590:CDS | 45.0% |
| ! | GGCCTAAGAGGCTTTTTGAA+TGG | + | chr1.3:55041704-55041723 | MS.gene85590:intron | 45.0% |
| ! | GTTGTTGGATTGGATAACGC+TGG | + | chr1.3:55039251-55039270 | MS.gene85590:CDS | 45.0% |
| ! | GTTTTCATGATCGAACTGGC+TGG | + | chr1.3:55042619-55042638 | MS.gene85590:intron | 45.0% |
| ! | TACTGGTCATCTCTAGGGAT+GGG | + | chr1.3:55041253-55041272 | MS.gene85590:intron | 45.0% |
| ! | TCAGAATTGTTACTTCGGCG+GGG | - | chr1.3:55042369-55042388 | None:intergenic | 45.0% |
| ! | TCATCTCTAGGGATGGGAAT+AGG | + | chr1.3:55041259-55041278 | MS.gene85590:intron | 45.0% |
| ! | TCATTTCAGGTCTGGGATCT+TGG | + | chr1.3:55044230-55044249 | MS.gene85590:intron | 45.0% |
| ! | TCTGTCACTTCACAGCATCA+AGG | + | chr1.3:55044472-55044491 | MS.gene85590:CDS | 45.0% |
| ! | TGTTTGAGCTGCCCTGTTTT+TGG | - | chr1.3:55041117-55041136 | None:intergenic | 45.0% |
| !! | GGTTAGGGTTGGATTGGTTT+AGG | + | chr1.3:55043215-55043234 | MS.gene85590:intron | 45.0% |
| !! | TTGATGGTGCATCAGAAGTC+TGG | - | chr1.3:55040471-55040490 | None:intergenic | 45.0% |
| !!! | GGATGAACTTTTCAGGTTGC+TGG | + | chr1.3:55044358-55044377 | MS.gene85590:CDS | 45.0% |
| !!! | GTTGGCTGCACTGTGTTTTT+TGG | - | chr1.3:55043738-55043757 | None:intergenic | 45.0% |
| !!! | TGGCTGCACTGTGTTTTTTG+GGG | - | chr1.3:55043736-55043755 | None:intergenic | 45.0% |
| AAAGGGATTCCCCTCCTGAT+AGG | + | chr1.3:55042258-55042277 | MS.gene85590:intron | 50.0% | |
| AACTTGGTTCCAAGCCAGTC+AGG | + | chr1.3:55042657-55042676 | MS.gene85590:intron | 50.0% | |
| AAGTTAAGGGGTCCATCAGC+AGG | + | chr1.3:55040261-55040280 | MS.gene85590:intron | 50.0% | |
| ACCAACTACCCCGTGTATTG+TGG | - | chr1.3:55043933-55043952 | None:intergenic | 50.0% | |
| ACCCCGTGTATTGTGGAAAG+TGG | - | chr1.3:55043926-55043945 | None:intergenic | 50.0% | |
| AGCTGTTTAGATGGCCTGAC+TGG | - | chr1.3:55042674-55042693 | None:intergenic | 50.0% | |
| ATAAAGGCCGTCTCCTGAGA+GGG | - | chr1.3:55044528-55044547 | None:intergenic | 50.0% | |
| ATCGAACTGGCTGGTAGAAC+CGG | + | chr1.3:55042628-55042647 | MS.gene85590:intron | 50.0% | |
| ATGGAACAGCATGGAGGAAG+GGG | - | chr1.3:55042871-55042890 | None:intergenic | 50.0% | |
| CATGGAACAGCATGGAGGAA+GGG | - | chr1.3:55042872-55042891 | None:intergenic | 50.0% | |
| CCCACTTTCCACAATACACG+GGG | + | chr1.3:55043922-55043941 | MS.gene85590:intron | 50.0% | |
| CCCCGTGTATTGTGGAAAGT+GGG | - | chr1.3:55043925-55043944 | None:intergenic | 50.0% | |
| CCTGCCCTCTTCAAAACAAG+AGG | - | chr1.3:55043688-55043707 | None:intergenic | 50.0% | |
| CGACGTTGCTACCAACAGTA+GGG | - | chr1.3:55039328-55039347 | None:intergenic | 50.0% | |
| CTTCAATAGGCCGGCCTAAT+AGG | + | chr1.3:55041683-55041702 | MS.gene85590:intron | 50.0% | |
| GACGACAATGACATGCTGAG+GGG | - | chr1.3:55042918-55042937 | None:intergenic | 50.0% | |
| GACGGCCTTTATGATGGTCT+TGG | + | chr1.3:55044536-55044555 | MS.gene85590:CDS | 50.0% | |
| GGACGACAATGACATGCTGA+GGG | - | chr1.3:55042919-55042938 | None:intergenic | 50.0% | |
| GGCTATAGGGTTTGATCGTG+GGG | + | chr1.3:55039868-55039887 | MS.gene85590:intron | 50.0% | |
| GGCTTTCGATCTTGCTTGCT+TGG | + | chr1.3:55043576-55043595 | MS.gene85590:intron | 50.0% | |
| GGTTTGCGATCTGTTGGTGT+TGG | + | chr1.3:55043113-55043132 | MS.gene85590:intron | 50.0% | |
| GTCCTTAAAGACGGCCAATC+AGG | - | chr1.3:55039982-55040001 | None:intergenic | 50.0% | |
| GTGGCTATAGGGTTTGATCG+TGG | + | chr1.3:55039866-55039885 | MS.gene85590:intron | 50.0% | |
| TACCCAGCAACCCAAGGTAT+AGG | - | chr1.3:55040137-55040156 | None:intergenic | 50.0% | |
| TCAGGAGACGGCCTTTATGA+TGG | + | chr1.3:55044530-55044549 | MS.gene85590:CDS | 50.0% | |
| TCCACAATACACGGGGTAGT+TGG | + | chr1.3:55043929-55043948 | MS.gene85590:intron | 50.0% | |
| TCGACGTTGCTACCAACAGT+AGG | - | chr1.3:55039329-55039348 | None:intergenic | 50.0% | |
| TCTAGGGATGGGAATAGGCT+AGG | + | chr1.3:55041264-55041283 | MS.gene85590:intron | 50.0% | |
| TGAAGTCCGTATGTCCACGT+TGG | + | chr1.3:55041068-55041087 | MS.gene85590:intron | 50.0% | |
| TGCTGATCCACTGAGTCATG+AGG | - | chr1.3:55040585-55040604 | None:intergenic | 50.0% | |
| TGGAAAACGGTCCTGTCCAA+GGG | + | chr1.3:55042726-55042745 | MS.gene85590:intron | 50.0% | |
| TGGACGACAATGACATGCTG+AGG | - | chr1.3:55042920-55042939 | None:intergenic | 50.0% | |
| TGTAGCATGGAACAGCATGG+AGG | - | chr1.3:55042877-55042896 | None:intergenic | 50.0% | |
| TGTCCAGGAAAAGTTGCGTC+AGG | - | chr1.3:55042587-55042606 | None:intergenic | 50.0% | |
| TTGGAAAACGGTCCTGTCCA+AGG | + | chr1.3:55042725-55042744 | MS.gene85590:intron | 50.0% | |
| TTTGTTCAACCTGGGCAGAG+TGG | - | chr1.3:55042964-55042983 | None:intergenic | 50.0% | |
| ! | CGCAGAACCTGTACCAGTTT+TGG | + | chr1.3:55042706-55042725 | MS.gene85590:intron | 50.0% |
| ! | CTACTGGTCATCTCTAGGGA+TGG | + | chr1.3:55041252-55041271 | MS.gene85590:intron | 50.0% |
| ! | GAGGCTTTTTGAATGGCCTG+TGG | + | chr1.3:55041711-55041730 | MS.gene85590:intron | 50.0% |
| ! | GGCCTTCTGAAAGCCTGATA+CGG | + | chr1.3:55041389-55041408 | MS.gene85590:intron | 50.0% |
| ! | GGGAATCCCTTTTCAGACCA+TGG | - | chr1.3:55042250-55042269 | None:intergenic | 50.0% |
| ! | TTGGCGGACAAGAAAGACTC+CGG | + | chr1.3:55044249-55044268 | MS.gene85590:CDS | 50.0% |
| ! | TTTAGATGGCCTGACTGGCT+TGG | - | chr1.3:55042669-55042688 | None:intergenic | 50.0% |
| ! | TTTCAGGTCTGGGATCTTGG+CGG | + | chr1.3:55044233-55044252 | MS.gene85590:intron | 50.0% |
| ! | TTTTTGAATGGCCTGTGGCC+TGG | + | chr1.3:55041716-55041735 | MS.gene85590:intron | 50.0% |
| !! | ACTGGCTTGGAACCAAGTTC+GGG | - | chr1.3:55042656-55042675 | None:intergenic | 50.0% |
| !! | ATGGTCTTGGATGGATTGCC+GGG | + | chr1.3:55044549-55044568 | MS.gene85590:CDS | 50.0% |
| !! | GACTGGCTTGGAACCAAGTT+CGG | - | chr1.3:55042657-55042676 | None:intergenic | 50.0% |
| !! | GATGGTCTTGGATGGATTGC+CGG | + | chr1.3:55044548-55044567 | MS.gene85590:CDS | 50.0% |
| !! | GGAGATGTGCATTTTGGCAG+AGG | + | chr1.3:55040311-55040330 | MS.gene85590:intron | 50.0% |
| !!! | CCTCTTGTTTTGAAGAGGGC+AGG | + | chr1.3:55043685-55043704 | MS.gene85590:intron | 50.0% |
| AAATTTGGCAGGCCAGGCTC+AGG | - | chr1.3:55041310-55041329 | None:intergenic | 55.0% | |
| AAGGGGAACGACAGTGAGCA+AGG | - | chr1.3:55042854-55042873 | None:intergenic | 55.0% | |
| ACAGTGAGCAAGGCAGTGTG+AGG | - | chr1.3:55042844-55042863 | None:intergenic | 55.0% | |
| ACTAGGGATGGGAATAGGCC+AGG | - | chr1.3:55041847-55041866 | None:intergenic | 55.0% | |
| ACTGAGTCATGAGGCATGCC+TGG | - | chr1.3:55040576-55040595 | None:intergenic | 55.0% | |
| AGCTCTTACCCAGCAACCCA+AGG | - | chr1.3:55040143-55040162 | None:intergenic | 55.0% | |
| AGCTTAAAAGGCCAGGCCAC+AGG | - | chr1.3:55041730-55041749 | None:intergenic | 55.0% | |
| AGGCATGCCTCATGACTCAG+TGG | + | chr1.3:55040575-55040594 | MS.gene85590:intron | 55.0% | |
| AGGCCTTGCAAAGCCTAGCT+CGG | - | chr1.3:55041290-55041309 | None:intergenic | 55.0% | |
| AGGCGGTGACAAAGACAAGG+AGG | + | chr1.3:55039730-55039749 | MS.gene85590:intron | 55.0% | |
| AGGGGTCCATCAGCAGGATT+TGG | + | chr1.3:55040267-55040286 | MS.gene85590:intron | 55.0% | |
| CAATGACATGCTGAGGGGTG+TGG | - | chr1.3:55042913-55042932 | None:intergenic | 55.0% | |
| CATAAAGGCCGTCTCCTGAG+AGG | - | chr1.3:55044529-55044548 | None:intergenic | 55.0% | |
| CTCAACACTCTCCTCCAAGC+TGG | + | chr1.3:55040877-55040896 | MS.gene85590:intron | 55.0% | |
| GCATGGAACAGCATGGAGGA+AGG | - | chr1.3:55042873-55042892 | None:intergenic | 55.0% | |
| GCCTCTTAGGCCTATTAGGC+CGG | - | chr1.3:55041696-55041715 | None:intergenic | 55.0% | |
| GCTACGGCTGGAATGCATGT+AGG | + | chr1.3:55043014-55043033 | MS.gene85590:intron | 55.0% | |
| GCTTTCAGAAGGCCAGACTC+AGG | - | chr1.3:55041383-55041402 | None:intergenic | 55.0% | |
| GGAAAACGGTCCTGTCCAAG+GGG | + | chr1.3:55042727-55042746 | MS.gene85590:intron | 55.0% | |
| GGCCGTATCAGGCTTTCAGA+AGG | - | chr1.3:55041394-55041413 | None:intergenic | 55.0% | |
| GGGAGCAATGCAAGTAGAGC+TGG | + | chr1.3:55039888-55039907 | MS.gene85590:intron | 55.0% | |
| GGGGTCCATCAGCAGGATTT+GGG | + | chr1.3:55040268-55040287 | MS.gene85590:intron | 55.0% | |
| TCGAACTGGCTGGTAGAACC+GGG | + | chr1.3:55042629-55042648 | MS.gene85590:intron | 55.0% | |
| TCGACAGCAGTGATAGAGCC+AGG | + | chr1.3:55044321-55044340 | MS.gene85590:CDS | 55.0% | |
| TGCTTTGCCAGTTACTCGCC+CGG | - | chr1.3:55044570-55044589 | None:intergenic | 55.0% | |
| TTGGAACCAAGTTCGGGTCC+CGG | - | chr1.3:55042650-55042669 | None:intergenic | 55.0% | |
| ! | GGACCTGACGCAACTTTTCC+TGG | + | chr1.3:55042581-55042600 | MS.gene85590:intron | 55.0% |
| ! | GGCCTATACCTTGGGTTGCT+GGG | + | chr1.3:55040132-55040151 | MS.gene85590:intron | 55.0% |
| ! | TGGCCTATACCTTGGGTTGC+TGG | + | chr1.3:55040131-55040150 | MS.gene85590:intron | 55.0% |
| !! | ACCAAGTCTCTAAGGCCCGA+GGG | - | chr1.3:55040944-55040963 | None:intergenic | 55.0% |
| ACCATGATGCCACTCTGCCC+AGG | + | chr1.3:55042952-55042971 | MS.gene85590:intron | 60.0% | |
| ACCCTCGGGCCTTAGAGACT+TGG | + | chr1.3:55040940-55040959 | MS.gene85590:intron | 60.0% | |
| ACCTGGGCAGAGTGGCATCA+TGG | - | chr1.3:55042956-55042975 | None:intergenic | 60.0% | |
| AGGCCGAGCTAGGCTTTGCA+AGG | + | chr1.3:55041284-55041303 | MS.gene85590:intron | 60.0% | |
| GCCGGCCTAATAGGCCTAAG+AGG | + | chr1.3:55041692-55041711 | MS.gene85590:intron | 60.0% | |
| GGAATAGGCTAGGCCGAGCT+AGG | + | chr1.3:55041274-55041293 | MS.gene85590:intron | 60.0% | |
| GTAAGCCTATGACAGGCCGC+AGG | - | chr1.3:55041352-55041371 | None:intergenic | 60.0% | |
| GTAGAACCGGGACCCGAACT+TGG | + | chr1.3:55042641-55042660 | MS.gene85590:intron | 60.0% | |
| TAAGGCCTAAGCCTGGCCTG+CGG | + | chr1.3:55041333-55041352 | MS.gene85590:intron | 60.0% | |
| TGGATTGCCGGGCGAGTAAC+TGG | + | chr1.3:55044560-55044579 | MS.gene85590:CDS | 60.0% | |
| !! | CACCAAGTCTCTAAGGCCCG+AGG | - | chr1.3:55040945-55040964 | None:intergenic | 60.0% |
| AATAGGCCAGGCCGGCCTAC+AGG | - | chr1.3:55041835-55041854 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGGCCTACA+GGG | - | chr1.3:55041834-55041853 | None:intergenic | 65.0% | |
| CAAGCTTGCAGCGCCCTCTC+AGG | + | chr1.3:55044512-55044531 | MS.gene85590:CDS | 65.0% | |
| CCTACGGCCTAGCCTACGAC+AGG | - | chr1.3:55041810-55041829 | None:intergenic | 65.0% | |
| CCTGTCGTAGGCTAGGCCGT+AGG | + | chr1.3:55041807-55041826 | MS.gene85590:intron | 65.0% | |
| GGCTTTGCAAGGCCTGAGCC+TGG | + | chr1.3:55041295-55041314 | MS.gene85590:intron | 65.0% | |
| GGGATGGGAATAGGCCAGGC+CGG | - | chr1.3:55041843-55041862 | None:intergenic | 65.0% | |
| TGCAGCGCCCTCTCAGGAGA+CGG | + | chr1.3:55044518-55044537 | MS.gene85590:CDS | 65.0% | |
| ACAGGCCGCAGGCCAGGCTT+AGG | - | chr1.3:55041341-55041360 | None:intergenic | 70.0% | |
| AGCCTACGACAGGCCAGGCC+AGG | - | chr1.3:55041800-55041819 | None:intergenic | 70.0% | |
| AGCCTGGCCTGGCCTGTCGT+AGG | + | chr1.3:55041795-55041814 | MS.gene85590:intron | 70.0% | |
| CCTATGACAGGCCGCAGGCC+AGG | - | chr1.3:55041347-55041366 | None:intergenic | 70.0% | |
| CCTGGCCTGCGGCCTGTCAT+AGG | + | chr1.3:55041344-55041363 | MS.gene85590:intron | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+AGG | + | chr1.3:55041817-55041836 | MS.gene85590:intron | 70.0% | |
| GGCCTAGCCTACGACAGGCC+AGG | - | chr1.3:55041805-55041824 | None:intergenic | 70.0% | |
| GGCCTGGCCTGTCGTAGGCT+AGG | + | chr1.3:55041800-55041819 | MS.gene85590:intron | 70.0% | |
| TAGGCCAGGCCGGCCTACAG+GGG | - | chr1.3:55041833-55041852 | None:intergenic | 70.0% | |
| GGCCGGCCTACAGGGGCCTA+CGG | - | chr1.3:55041826-55041845 | None:intergenic | 75.0% | |
| GGCCGTAGGCCCCTGTAGGC+CGG | + | chr1.3:55041821-55041840 | MS.gene85590:intron | 75.0% | |
| TAGGCCCCTGTAGGCCGGCC+TGG | + | chr1.3:55041826-55041845 | MS.gene85590:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 55039188 | 55044592 | 55039188 | ID=MS.gene85590 |
| chr1.3 | mRNA | 55039188 | 55044592 | 55039188 | ID=MS.gene85590.t1;Parent=MS.gene85590 |
| chr1.3 | exon | 55039188 | 55039379 | 55039188 | ID=MS.gene85590.t1.exon1;Parent=MS.gene85590.t1 |
| chr1.3 | CDS | 55039188 | 55039379 | 55039188 | ID=cds.MS.gene85590.t1;Parent=MS.gene85590.t1 |
| chr1.3 | exon | 55044239 | 55044592 | 55044239 | ID=MS.gene85590.t1.exon2;Parent=MS.gene85590.t1 |
| chr1.3 | CDS | 55044239 | 55044592 | 55044239 | ID=cds.MS.gene85590.t1;Parent=MS.gene85590.t1 |
| Gene Sequence |
| Protein sequence |
