Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87452.t1 | XP_003629446.1 | 97.1 | 204 | 6 | 0 | 1 | 204 | 1 | 204 | 8.00E-102 | 379.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87452.t1 | Q54TC5 | 41.8 | 194 | 107 | 3 | 10 | 202 | 6 | 194 | 6.8e-33 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87452.t1 | G7LER9 | 97.1 | 204 | 6 | 0 | 1 | 204 | 1 | 204 | 5.8e-102 | 379.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene87452 | 0.867456 | 1.35E-65 | -1.69E-46 |
| MS.gene049910 | MS.gene87452 | 0.830868 | 2.30E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene87452 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene87452 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene87452 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene87452 | 0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene050464 | MS.gene87452 | 0.812586 | 3.93E-51 | -1.69E-46 |
| MS.gene050529 | MS.gene87452 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene87452 | 0.801333 | 9.46E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene87452 | 0.83419 | 3.46E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene87452 | 0.801781 | 7.66E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene87452 | 0.817983 | 2.48E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene87452 | 0.841482 | 4.63E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene87452 | 0.810948 | 8.94E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene87452 | 0.830948 | 2.20E-55 | -1.69E-46 |
| MS.gene052078 | MS.gene87452 | 0.814412 | 1.56E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene87452 | 0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene87452 | 0.821515 | 3.87E-53 | -1.69E-46 |
| MS.gene052207 | MS.gene87452 | 0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene87452 | 0.809955 | 1.47E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene87452 | 0.805984 | 1.03E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene87452 | 0.883161 | 5.67E-71 | -1.69E-46 |
| MS.gene054011 | MS.gene87452 | 0.802392 | 5.73E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene87452 | 0.838289 | 3.14E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene87452 | 0.833304 | 5.76E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene87452 | 0.837593 | 4.74E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene87452 | 0.832793 | 7.72E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene87452 | 0.823504 | 1.34E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene87452 | 0.840487 | 8.44E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene87452 | 0.83218 | 1.10E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene87452 | 0.813944 | 1.98E-51 | -1.69E-46 |
| MS.gene055712 | MS.gene87452 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene055859 | MS.gene87452 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene87452 | 0.807504 | 4.89E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene87452 | -0.809076 | 2.26E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene87452 | 0.804373 | 2.23E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene87452 | 0.817179 | 3.77E-52 | -1.69E-46 |
| MS.gene057121 | MS.gene87452 | 0.822117 | 2.81E-53 | -1.69E-46 |
| MS.gene057245 | MS.gene87452 | 0.831439 | 1.67E-55 | -1.69E-46 |
| MS.gene057439 | MS.gene87452 | 0.830209 | 3.34E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene87452 | 0.849933 | 2.35E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene87452 | 0.845312 | 4.39E-59 | -1.69E-46 |
| MS.gene058142 | MS.gene87452 | 0.802935 | 4.43E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene87452 | 0.801924 | 7.16E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene87452 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene87452 | 0.826082 | 3.30E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene87452 | 0.832614 | 8.55E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene87452 | 0.827114 | 1.87E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene87452 | 0.812826 | 3.49E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene87452 | 0.842111 | 3.16E-58 | -1.69E-46 |
| MS.gene059285 | MS.gene87452 | 0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene059518 | MS.gene87452 | 0.837447 | 5.17E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene87452 | 0.811055 | 8.48E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene87452 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene87452 | 0.825738 | 3.98E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene87452 | 0.821633 | 3.64E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene87452 | 0.864502 | 1.16E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene87452 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene87452 | 0.821232 | 4.50E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene87452 | 0.86914 | 3.87E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87452.t1 | MTR_8g077570 | 97.059 | 204 | 6 | 0 | 1 | 204 | 1 | 204 | 5.52e-144 | 399 |
| MS.gene87452.t1 | MTR_8g077570 | 95.513 | 156 | 7 | 0 | 1 | 156 | 1 | 156 | 5.29e-107 | 304 |
| MS.gene87452.t1 | MTR_8g077570 | 96.753 | 154 | 5 | 0 | 1 | 154 | 1 | 154 | 4.15e-106 | 302 |
| MS.gene87452.t1 | MTR_8g077570 | 96.026 | 151 | 6 | 0 | 1 | 151 | 1 | 151 | 1.81e-102 | 292 |
| MS.gene87452.t1 | MTR_8g077570 | 96.454 | 141 | 5 | 0 | 1 | 141 | 1 | 141 | 9.38e-96 | 275 |
| MS.gene87452.t1 | MTR_1g022295 | 62.255 | 204 | 76 | 1 | 1 | 204 | 1 | 203 | 7.75e-87 | 254 |
| MS.gene87452.t1 | MTR_1g022295 | 61.864 | 118 | 45 | 0 | 87 | 204 | 35 | 152 | 1.48e-46 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene87452.t1 | AT5G66550 | 68.528 | 197 | 62 | 0 | 8 | 204 | 10 | 206 | 7.49e-96 | 278 |
| MS.gene87452.t1 | AT5G66550 | 68.528 | 197 | 62 | 0 | 8 | 204 | 41 | 237 | 3.00e-95 | 277 |
| MS.gene87452.t1 | AT5G42770 | 59.804 | 204 | 81 | 1 | 1 | 204 | 1 | 203 | 1.41e-83 | 246 |
| MS.gene87452.t1 | AT5G42770 | 54.348 | 230 | 79 | 1 | 1 | 204 | 1 | 230 | 9.27e-82 | 243 |
| MS.gene87452.t1 | AT5G42770 | 60.784 | 204 | 79 | 1 | 1 | 204 | 1 | 203 | 4.49e-79 | 235 |
| MS.gene87452.t1 | AT5G66550 | 68.919 | 148 | 46 | 0 | 8 | 155 | 41 | 188 | 5.86e-70 | 212 |
| MS.gene87452.t1 | AT5G66550 | 68.919 | 148 | 46 | 0 | 8 | 155 | 41 | 188 | 5.86e-70 | 212 |
| MS.gene87452.t1 | AT2G25500 | 70.787 | 89 | 26 | 0 | 8 | 96 | 10 | 98 | 8.88e-39 | 129 |
Find 53 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTGCAACAGATAATTT+TGG | 0.125772 | 8.3:+26697889 | MS.gene87452:intron |
| GAAACAGATTCTTGCTGAAA+TGG | 0.312077 | 8.3:+26697931 | MS.gene87452:CDS |
| GAGGGAAAAGCCTGAAGATT+TGG | 0.328511 | 8.3:+26698093 | MS.gene87452:CDS |
| GGAGTTACGTTCAATGTTGC+TGG | 0.360743 | 8.3:+26701001 | MS.gene87452:CDS |
| AATGTTACAACCAAATCTTC+AGG | 0.362621 | 8.3:-26698103 | None:intergenic |
| GGGATACGAATTCACAATAA+TGG | 0.374060 | 8.3:+26697952 | MS.gene87452:CDS |
| TGGTATATCGAGGAATAATC+AGG | 0.384140 | 8.3:+26700411 | MS.gene87452:CDS |
| GAGTTTCTCTGTAAGAGCTT+TGG | 0.389303 | 8.3:-26701501 | None:intergenic |
| AGACGAGGTCATTGATAATC+TGG | 0.411625 | 8.3:+26700799 | MS.gene87452:CDS |
| CTTGTGACCGGAAAACGTTA+TGG | 0.420227 | 8.3:+26700615 | MS.gene87452:CDS |
| GCAGTGATTAACAATGTTGT+AGG | 0.432301 | 8.3:-26699398 | None:intergenic |
| GCTCCTTACTGATGGTCAAT+TGG | 0.435359 | 8.3:+26699364 | MS.gene87452:CDS |
| TTGTGACCGGAAAACGTTAT+GGG | 0.437051 | 8.3:+26700616 | MS.gene87452:CDS |
| CCGTGCTTCTTTCTCACTAG+TGG | 0.446121 | 8.3:-26700441 | None:intergenic |
| ATATTGATGAGAAAAGTATT+AGG | 0.452245 | 8.3:+26698071 | MS.gene87452:CDS |
| CGTGCTTCTTTCTCACTAGT+GGG | 0.453937 | 8.3:-26700440 | None:intergenic |
| AAACAGATTCTTGCTGAAAT+GGG | 0.455932 | 8.3:+26697932 | MS.gene87452:CDS |
| TGACCTCGTCTGGTATTTCA+AGG | 0.473389 | 8.3:-26700787 | None:intergenic |
| GAGTTACGTTCAATGTTGCT+GGG | 0.474124 | 8.3:+26701002 | MS.gene87452:CDS |
| TCCACAAAAGGCAACGTCAA+TGG | 0.474325 | 8.3:-26701043 | None:intergenic |
| AGATTATCAATGACCTCGTC+TGG | 0.476779 | 8.3:-26700797 | None:intergenic |
| TGGGCTCTTCTTCAAAAGCT+CGG | 0.494317 | 8.3:+26697909 | MS.gene87452:CDS |
| TCTTACAGAGAAACTCATAA+TGG | 0.504312 | 8.3:+26701508 | MS.gene87452:CDS |
| GGAAATGAAGCAAACCTTGA+AGG | 0.510542 | 8.3:-26697778 | None:intergenic |
| CTAACCACTGCATCCACAAA+AGG | 0.511567 | 8.3:-26701055 | None:intergenic |
| GGTAGCCATGCAGCTGTGGT+TGG | 0.514408 | 8.3:+26700573 | MS.gene87452:CDS |
| GGAGCTTCTCAGATTGATGA+TGG | 0.524708 | 8.3:+26700980 | MS.gene87452:intron |
| TTGTAGGTTGTGGTATATCG+AGG | 0.540015 | 8.3:+26700401 | MS.gene87452:intron |
| CCTTACTGATGGTCAATTGG+AGG | 0.540032 | 8.3:+26699367 | MS.gene87452:CDS |
| TTGATGAGAAAAGTATTAGG+AGG | 0.543898 | 8.3:+26698074 | MS.gene87452:CDS |
| TGTAACATTAGCTGAGGCTA+AGG | 0.544202 | 8.3:+26698117 | MS.gene87452:CDS |
| TGAAGCAAACCTTGAAGGAA+GGG | 0.549349 | 8.3:-26697773 | None:intergenic |
| ATGAAGCAAACCTTGAAGGA+AGG | 0.549770 | 8.3:-26697774 | None:intergenic |
| CCTCCAATTGACCATCAGTA+AGG | 0.553474 | 8.3:-26699367 | None:intergenic |
| GAAGCACGGGAGTTTGTCAA+AGG | 0.561412 | 8.3:+26700455 | MS.gene87452:CDS |
| TTCGGGTAGCCATGCAGCTG+TGG | 0.565190 | 8.3:+26700569 | MS.gene87452:CDS |
| TGATGAGAAAAGTATTAGGA+GGG | 0.577922 | 8.3:+26698075 | MS.gene87452:CDS |
| CACTAGTGAGAAAGAAGCAC+GGG | 0.587114 | 8.3:+26700442 | MS.gene87452:CDS |
| AGGCTGATGCTATTGTGCAA+AGG | 0.591564 | 8.3:+26699342 | MS.gene87452:intron |
| TTTGGTTGTAACATTAGCTG+AGG | 0.594742 | 8.3:+26698111 | MS.gene87452:CDS |
| GTGCAAAGGCTCCTTACTGA+TGG | 0.601481 | 8.3:+26699356 | MS.gene87452:CDS |
| AGCTGTGGTTGGATCTGTTG+TGG | 0.605245 | 8.3:+26700584 | MS.gene87452:CDS |
| GTTACGTTCAATGTTGCTGG+GGG | 0.607225 | 8.3:+26701004 | MS.gene87452:CDS |
| GGATCAACAGATACAGTGAT+GGG | 0.614705 | 8.3:+26701473 | MS.gene87452:CDS |
| TGTGACCGGAAAACGTTATG+GGG | 0.614753 | 8.3:+26700617 | MS.gene87452:CDS |
| AGTTACGTTCAATGTTGCTG+GGG | 0.621658 | 8.3:+26701003 | MS.gene87452:CDS |
| GTGGTGACTAACCTTGTGAC+CGG | 0.625151 | 8.3:+26700603 | MS.gene87452:CDS |
| TGGATCAACAGATACAGTGA+TGG | 0.629301 | 8.3:+26701472 | MS.gene87452:CDS |
| TTTCCTTGAAATACCAGACG+AGG | 0.630329 | 8.3:+26700784 | MS.gene87452:CDS |
| CAGATCCAACCACAGCTGCA+TGG | 0.633215 | 8.3:-26700578 | None:intergenic |
| GGTATATCGAGGAATAATCA+GGG | 0.642261 | 8.3:+26700412 | MS.gene87452:CDS |
| CCACTAGTGAGAAAGAAGCA+CGG | 0.683760 | 8.3:+26700441 | MS.gene87452:CDS |
| GTGACCGGAAAACGTTATGG+GGG | 0.688688 | 8.3:+26700618 | MS.gene87452:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGGAAAATATAAAAAT+TGG | - | chr8.3:26701252-26701271 | None:intergenic | 10.0% |
| !! | CATAATATATAAATAAAACT+TGG | + | chr8.3:26700116-26700135 | MS.gene87452:intron | 10.0% |
| !! | AAAATTGAAATTGTTTAGTT+TGG | + | chr8.3:26698028-26698047 | MS.gene87452:intron | 15.0% |
| !! | ATTCAAAAATTTATCTTCAT+TGG | + | chr8.3:26698216-26698235 | MS.gene87452:intron | 15.0% |
| !! | TTATTATTTCCACATTAAAA+AGG | - | chr8.3:26698178-26698197 | None:intergenic | 15.0% |
| !!! | ACTAGATATAGTAAAATTTT+AGG | - | chr8.3:26698993-26699012 | None:intergenic | 15.0% |
| !!! | GATTTCTAATATGTTTATTT+TGG | + | chr8.3:26699120-26699139 | MS.gene87452:intron | 15.0% |
| !!! | GTTTTATTTATATATTATGC+AGG | - | chr8.3:26700115-26700134 | None:intergenic | 15.0% |
| !!! | TCAATTTGAAGTTAAATTTA+GGG | + | chr8.3:26699296-26699315 | MS.gene87452:intron | 15.0% |
| !!! | TGAATCTTTTTTAATTTTGA+TGG | - | chr8.3:26701193-26701212 | None:intergenic | 15.0% |
| !!! | TTCTATCATTTAACTTATTT+AGG | - | chr8.3:26699247-26699266 | None:intergenic | 15.0% |
| !! | AAATTAGAAAAAGGTCATAT+AGG | - | chr8.3:26700324-26700343 | None:intergenic | 20.0% |
| !! | AAGAAAACTCATATAGTATT+TGG | - | chr8.3:26700952-26700971 | None:intergenic | 20.0% |
| !! | AATAACTGCTAAGTTTATAA+AGG | - | chr8.3:26698487-26698506 | None:intergenic | 20.0% |
| !! | ATAATTACCAACAACAAAAA+AGG | - | chr8.3:26700502-26700521 | None:intergenic | 20.0% |
| !! | TAATTACCAACAACAAAAAA+GGG | - | chr8.3:26700501-26700520 | None:intergenic | 20.0% |
| !! | TTTGTCAAAATAAGAATATG+TGG | + | chr8.3:26699665-26699684 | MS.gene87452:intron | 20.0% |
| !!! | ACCTTTTTCTAATTTTCATT+TGG | + | chr8.3:26700329-26700348 | MS.gene87452:intron | 20.0% |
| !!! | AGAATTGATTCTTATATGTT+TGG | + | chr8.3:26698725-26698744 | MS.gene87452:intron | 20.0% |
| !!! | ATATGAGTTTTCTTATTTGA+TGG | + | chr8.3:26700958-26700977 | MS.gene87452:intron | 20.0% |
| !!! | ATATTGATGAGAAAAGTATT+AGG | + | chr8.3:26698071-26698090 | MS.gene87452:CDS | 20.0% |
| !!! | ATATTGCAACAGATAATTTT+GGG | + | chr8.3:26697890-26697909 | MS.gene87452:intron | 20.0% |
| !!! | ATCTTTTGAAATTTTCTTTC+AGG | + | chr8.3:26700912-26700931 | MS.gene87452:intron | 20.0% |
| !!! | CTCAATTTGAAGTTAAATTT+AGG | + | chr8.3:26699295-26699314 | MS.gene87452:intron | 20.0% |
| !!! | TATATTGCAACAGATAATTT+TGG | + | chr8.3:26697889-26697908 | MS.gene87452:intron | 20.0% |
| !!! | TATGAGTTTTCTTATTTGAT+GGG | + | chr8.3:26700959-26700978 | MS.gene87452:intron | 20.0% |
| !!! | TTTTTGTTGTTGGTAATTAT+AGG | + | chr8.3:26700502-26700521 | MS.gene87452:intron | 20.0% |
| ! | AAAAGATGAAAATCAATGTG+AGG | + | chr8.3:26698563-26698582 | MS.gene87452:intron | 25.0% |
| ! | AAAGAAGGGGAAAAATATAT+TGG | - | chr8.3:26701268-26701287 | None:intergenic | 25.0% |
| ! | AAATTGGAGCATAAGAAAAA+AGG | - | chr8.3:26701236-26701255 | None:intergenic | 25.0% |
| ! | AACAAACAAATACTGAAAGT+TGG | - | chr8.3:26699447-26699466 | None:intergenic | 25.0% |
| ! | AAGGTAAAGTGATTTATGTT+TGG | - | chr8.3:26698860-26698879 | None:intergenic | 25.0% |
| ! | AAGTATATCATAAAGTTGAG+AGG | + | chr8.3:26699267-26699286 | MS.gene87452:intron | 25.0% |
| ! | AATGAAATATGTACAGAAGA+GGG | - | chr8.3:26700168-26700187 | None:intergenic | 25.0% |
| ! | AATTACCAACAACAAAAAAG+GGG | - | chr8.3:26700500-26700519 | None:intergenic | 25.0% |
| ! | AATTCAATCACATGAATATG+AGG | - | chr8.3:26697866-26697885 | None:intergenic | 25.0% |
| ! | AGAATATGTGGTCAAAATAA+AGG | + | chr8.3:26699677-26699696 | MS.gene87452:intron | 25.0% |
| ! | CACAGATATTATCTGTATAA+AGG | - | chr8.3:26699558-26699577 | None:intergenic | 25.0% |
| ! | GCAACATAATAAGTTTACAA+AGG | - | chr8.3:26700367-26700386 | None:intergenic | 25.0% |
| ! | GCCAAATGAAAATTAGAAAA+AGG | - | chr8.3:26700333-26700352 | None:intergenic | 25.0% |
| ! | GTTAAGAAAACAGAGTAAAA+GGG | - | chr8.3:26701423-26701442 | None:intergenic | 25.0% |
| ! | TAAAATTGTTCCTATATGAC+AGG | + | chr8.3:26700757-26700776 | MS.gene87452:intron | 25.0% |
| ! | TAACCTTGATATACTTCTTT+AGG | + | chr8.3:26699322-26699341 | MS.gene87452:intron | 25.0% |
| ! | TAATGAAATATGTACAGAAG+AGG | - | chr8.3:26700169-26700188 | None:intergenic | 25.0% |
| ! | TACATTTCGAACAAAAAGTA+TGG | + | chr8.3:26699973-26699992 | MS.gene87452:intron | 25.0% |
| ! | TCTTCTGTACATATTTCATT+AGG | + | chr8.3:26700168-26700187 | MS.gene87452:intron | 25.0% |
| ! | TGTACATATTTCATTAGGTA+CGG | + | chr8.3:26700173-26700192 | MS.gene87452:intron | 25.0% |
| ! | TGTTAAGAAAACAGAGTAAA+AGG | - | chr8.3:26701424-26701443 | None:intergenic | 25.0% |
| ! | TTCTTATTAGAGGAAGTTTA+TGG | - | chr8.3:26699224-26699243 | None:intergenic | 25.0% |
| !! | AATAAATGTTTTGTAGGTTG+TGG | + | chr8.3:26700391-26700410 | MS.gene87452:intron | 25.0% |
| !! | AATATATTTTTCCCCTTCTT+TGG | + | chr8.3:26701267-26701286 | MS.gene87452:intron | 25.0% |
| !! | ATATATTTTTCCCCTTCTTT+GGG | + | chr8.3:26701268-26701287 | MS.gene87452:intron | 25.0% |
| !! | ATTGTGAATCCTTTTTAATG+TGG | + | chr8.3:26698166-26698185 | MS.gene87452:intron | 25.0% |
| !! | CAAAGGTTTGTATGAATTTT+AGG | + | chr8.3:26700472-26700491 | MS.gene87452:intron | 25.0% |
| !! | CTCTAGAAAATTAACTCAAT+TGG | - | chr8.3:26701365-26701384 | None:intergenic | 25.0% |
| !! | CTTATTTAGGTTCTTATTAG+AGG | - | chr8.3:26699234-26699253 | None:intergenic | 25.0% |
| !! | GCTACAAATAAATGTTTTGT+AGG | + | chr8.3:26700385-26700404 | MS.gene87452:intron | 25.0% |
| AAACAGATTCTTGCTGAAAT+GGG | + | chr8.3:26697932-26697951 | MS.gene87452:CDS | 30.0% | |
| AAACTTTCCCAATACCAAAT+TGG | - | chr8.3:26699712-26699731 | None:intergenic | 30.0% | |
| AAATCACACAATTGTGAATG+TGG | - | chr8.3:26700540-26700559 | None:intergenic | 30.0% | |
| AAGAGAACATTAACTAAAGC+AGG | + | chr8.3:26700085-26700104 | MS.gene87452:intron | 30.0% | |
| AATGTTACAACCAAATCTTC+AGG | - | chr8.3:26698106-26698125 | None:intergenic | 30.0% | |
| AGAATGACCAATTTGGTATT+GGG | + | chr8.3:26699702-26699721 | MS.gene87452:intron | 30.0% | |
| AGGAAATAAACCTGTCATAT+AGG | - | chr8.3:26700770-26700789 | None:intergenic | 30.0% | |
| ATGTATATAGAATGAGATGC+TGG | - | chr8.3:26700272-26700291 | None:intergenic | 30.0% | |
| ATTACCAACAACAAAAAAGG+GGG | - | chr8.3:26700499-26700518 | None:intergenic | 30.0% | |
| ATTAGAGACTTGACCTTAAT+AGG | - | chr8.3:26699900-26699919 | None:intergenic | 30.0% | |
| ATTTGTTCCATATAAGAGAG+TGG | - | chr8.3:26700052-26700071 | None:intergenic | 30.0% | |
| TAGTTAATGTTCTCTTTCTC+TGG | - | chr8.3:26700081-26700100 | None:intergenic | 30.0% | |
| TCTTACAGAGAAACTCATAA+TGG | + | chr8.3:26701508-26701527 | MS.gene87452:CDS | 30.0% | |
| TGTATATAGAATGAGATGCT+GGG | - | chr8.3:26700271-26700290 | None:intergenic | 30.0% | |
| ! | AATTGATTCTACTTGAAGCT+AGG | + | chr8.3:26698762-26698781 | MS.gene87452:intron | 30.0% |
| ! | AGATGTTACTTAGGAGTAAA+AGG | - | chr8.3:26697813-26697832 | None:intergenic | 30.0% |
| ! | ATATAACTCAGGTTCTTTTC+CGG | - | chr8.3:26699752-26699771 | None:intergenic | 30.0% |
| ! | ATGTTACTTAGGAGTAAAAG+GGG | - | chr8.3:26697811-26697830 | None:intergenic | 30.0% |
| ! | ATTGAGCGATTGAAGTTTTT+AGG | + | chr8.3:26698958-26698977 | MS.gene87452:intron | 30.0% |
| ! | GATGTTACTTAGGAGTAAAA+GGG | - | chr8.3:26697812-26697831 | None:intergenic | 30.0% |
| ! | TATATTTTTCCCCTTCTTTG+GGG | + | chr8.3:26701269-26701288 | MS.gene87452:intron | 30.0% |
| ! | TTGAGCGATTGAAGTTTTTA+GGG | + | chr8.3:26698959-26698978 | MS.gene87452:intron | 30.0% |
| !! | AATTTCATAGTGGACACAAA+GGG | + | chr8.3:26699849-26699868 | MS.gene87452:intron | 30.0% |
| !! | ATTTTGGAAGAACCAATCTA+AGG | + | chr8.3:26699136-26699155 | MS.gene87452:intron | 30.0% |
| !! | TAATTTCATAGTGGACACAA+AGG | + | chr8.3:26699848-26699867 | MS.gene87452:intron | 30.0% |
| !! | TGATGAGAAAAGTATTAGGA+GGG | + | chr8.3:26698075-26698094 | MS.gene87452:CDS | 30.0% |
| !! | TTGATGAGAAAAGTATTAGG+AGG | + | chr8.3:26698074-26698093 | MS.gene87452:CDS | 30.0% |
| !! | TTTAATTTTGATGGCAACGA+GGG | - | chr8.3:26701184-26701203 | None:intergenic | 30.0% |
| !!! | GATCAAATGTTTTGAGAAAC+CGG | - | chr8.3:26700895-26700914 | None:intergenic | 30.0% |
| !!! | TGATTTTGGTTTTTGCTTGT+TGG | + | chr8.3:26698609-26698628 | MS.gene87452:intron | 30.0% |
| !!! | TTTTAATTTTGATGGCAACG+AGG | - | chr8.3:26701185-26701204 | None:intergenic | 30.0% |
| AAAGGAGAGAATGACCAATT+TGG | + | chr8.3:26699695-26699714 | MS.gene87452:intron | 35.0% | |
| AAGAATGCATATTGCTAACG+TGG | - | chr8.3:26701142-26701161 | None:intergenic | 35.0% | |
| AATAGCATCATAATGTGAGC+TGG | - | chr8.3:26699621-26699640 | None:intergenic | 35.0% | |
| ACATGAATATGAGGTTGCAA+TGG | - | chr8.3:26697857-26697876 | None:intergenic | 35.0% | |
| ACTTAGTTGTGAACACTTGA+GGG | + | chr8.3:26698514-26698533 | MS.gene87452:intron | 35.0% | |
| AGAATAAATCGCAGTGTTTG+AGG | - | chr8.3:26700221-26700240 | None:intergenic | 35.0% | |
| AGACTCTAGGTATATAACTC+AGG | - | chr8.3:26699763-26699782 | None:intergenic | 35.0% | |
| AGATGAAAATCAATGTGAGG+AGG | + | chr8.3:26698566-26698585 | MS.gene87452:intron | 35.0% | |
| ATAAAGGAAAACCGAAGTCA+CGG | - | chr8.3:26699542-26699561 | None:intergenic | 35.0% | |
| ATACCAGTTCACTGTATGTT+TGG | + | chr8.3:26698663-26698682 | MS.gene87452:intron | 35.0% | |
| ATAGCATCATAATGTGAGCT+GGG | - | chr8.3:26699620-26699639 | None:intergenic | 35.0% | |
| ATGTTCGACTTAATTCACAC+AGG | - | chr8.3:26699808-26699827 | None:intergenic | 35.0% | |
| CACAACAATTTACCAGTCAT+TGG | - | chr8.3:26698456-26698475 | None:intergenic | 35.0% | |
| CATCTAGTAAACTTCTGCTT+TGG | - | chr8.3:26700005-26700024 | None:intergenic | 35.0% | |
| CTTATTAGCTATCCAATGAC+TGG | + | chr8.3:26698441-26698460 | MS.gene87452:intron | 35.0% | |
| CTTCAATCGCTCAATATGTT+TGG | - | chr8.3:26698953-26698972 | None:intergenic | 35.0% | |
| CTTGGGGATTAATTTCATAG+TGG | + | chr8.3:26699839-26699858 | MS.gene87452:intron | 35.0% | |
| GAAACAGATTCTTGCTGAAA+TGG | + | chr8.3:26697931-26697950 | MS.gene87452:CDS | 35.0% | |
| GAGAATGACCAATTTGGTAT+TGG | + | chr8.3:26699701-26699720 | MS.gene87452:intron | 35.0% | |
| GATGAAAATCAATGTGAGGA+GGG | + | chr8.3:26698567-26698586 | MS.gene87452:intron | 35.0% | |
| GCAGTGATTAACAATGTTGT+AGG | - | chr8.3:26699401-26699420 | None:intergenic | 35.0% | |
| GGGATACGAATTCACAATAA+TGG | + | chr8.3:26697952-26697971 | MS.gene87452:CDS | 35.0% | |
| GGTATATCGAGGAATAATCA+GGG | + | chr8.3:26700412-26700431 | MS.gene87452:CDS | 35.0% | |
| GTATATAGAATGAGATGCTG+GGG | - | chr8.3:26700270-26700289 | None:intergenic | 35.0% | |
| GTCAAGTCTCTAATTACAGT+AGG | + | chr8.3:26699906-26699925 | MS.gene87452:intron | 35.0% | |
| TACTTAGTTGTGAACACTTG+AGG | + | chr8.3:26698513-26698532 | MS.gene87452:intron | 35.0% | |
| TATGAAATTAATCCCCAAGC+AGG | - | chr8.3:26699838-26699857 | None:intergenic | 35.0% | |
| TCATACTTTGCTCAGTTCAA+GGG | - | chr8.3:26700852-26700871 | None:intergenic | 35.0% | |
| TCATTAGGTACGGTGTAAAT+CGG | + | chr8.3:26700183-26700202 | MS.gene87452:intron | 35.0% | |
| TCTAGAGAACGTTTGTTTCA+GGG | + | chr8.3:26701378-26701397 | MS.gene87452:intron | 35.0% | |
| TCTGCAGCATCTAATATACA+AGG | - | chr8.3:26700677-26700696 | None:intergenic | 35.0% | |
| TGAAAGGCTAAGAAAGACAA+TGG | + | chr8.3:26699072-26699091 | MS.gene87452:intron | 35.0% | |
| TGGTATATCGAGGAATAATC+AGG | + | chr8.3:26700411-26700430 | MS.gene87452:CDS | 35.0% | |
| TTACCAACAACAAAAAAGGG+GGG | - | chr8.3:26700498-26700517 | None:intergenic | 35.0% | |
| TTCATACTTTGCTCAGTTCA+AGG | - | chr8.3:26700853-26700872 | None:intergenic | 35.0% | |
| TTCTCACTGTTGAACTTGAA+AGG | + | chr8.3:26699056-26699075 | MS.gene87452:intron | 35.0% | |
| TTGAACTGAGCAAAGTATGA+AGG | + | chr8.3:26700852-26700871 | MS.gene87452:intron | 35.0% | |
| TTTGGTTGTAACATTAGCTG+AGG | + | chr8.3:26698111-26698130 | MS.gene87452:CDS | 35.0% | |
| ! | AATTACGACCTCTCTAAAAG+TGG | - | chr8.3:26698691-26698710 | None:intergenic | 35.0% |
| ! | ATATTTTTCCCCTTCTTTGG+GGG | + | chr8.3:26701270-26701289 | MS.gene87452:intron | 35.0% |
| ! | CAGCCTAAAGAAGTATATCA+AGG | - | chr8.3:26699328-26699347 | None:intergenic | 35.0% |
| ! | CAGTGTTTGAGGCAAATATT+TGG | - | chr8.3:26700210-26700229 | None:intergenic | 35.0% |
| ! | GGAGTGAGATGAAATGATTT+TGG | + | chr8.3:26698595-26698614 | MS.gene87452:intron | 35.0% |
| ! | GTGTGATTTTGCAGGATATT+CGG | + | chr8.3:26700551-26700570 | MS.gene87452:intron | 35.0% |
| ! | TAGGAGTAAAAGGGGTATAA+CGG | - | chr8.3:26697803-26697822 | None:intergenic | 35.0% |
| ! | TATAACTCAGGTTCTTTTCC+GGG | - | chr8.3:26699751-26699770 | None:intergenic | 35.0% |
| ! | TCACAATTGTGTGATTTTGC+AGG | + | chr8.3:26700543-26700562 | MS.gene87452:intron | 35.0% |
| ! | TGCATTGGAAGATGTTACTT+AGG | - | chr8.3:26697822-26697841 | None:intergenic | 35.0% |
| ! | TGTGATTTTGCAGGATATTC+GGG | + | chr8.3:26700552-26700571 | MS.gene87452:intron | 35.0% |
| ! | TTCTAGAGAACGTTTGTTTC+AGG | + | chr8.3:26701377-26701396 | MS.gene87452:intron | 35.0% |
| !! | ACCTTCAACTCACTTTTAGT+CGG | + | chr8.3:26698875-26698894 | MS.gene87452:intron | 35.0% |
| !! | GGTGAAAAGAGTACTTTAAC+CGG | + | chr8.3:26700873-26700892 | MS.gene87452:intron | 35.0% |
| !! | TGGTTGAAGGTTTTATGCAT+TGG | - | chr8.3:26697837-26697856 | None:intergenic | 35.0% |
| AAAAGAAAGCCCCCAAAGAA+GGG | - | chr8.3:26701282-26701301 | None:intergenic | 40.0% | |
| AATGATCTGTGTGATCCTTG+TGG | + | chr8.3:26701444-26701463 | MS.gene87452:intron | 40.0% | |
| ACAACATTCTCAATGCTGAC+AGG | - | chr8.3:26699593-26699612 | None:intergenic | 40.0% | |
| AGATTATCAATGACCTCGTC+TGG | - | chr8.3:26700800-26700819 | None:intergenic | 40.0% | |
| AGTTACGTTCAATGTTGCTG+GGG | + | chr8.3:26701003-26701022 | MS.gene87452:CDS | 40.0% | |
| ATCAATGTGAGGAGGGAAAA+TGG | + | chr8.3:26698574-26698593 | MS.gene87452:intron | 40.0% | |
| ATGAAGCAAACCTTGAAGGA+AGG | - | chr8.3:26697777-26697796 | None:intergenic | 40.0% | |
| ATTGACACTTCTCATCCAAG+GGG | + | chr8.3:26698258-26698277 | MS.gene87452:intron | 40.0% | |
| CAGATGCAAAGACCTTAGAT+TGG | - | chr8.3:26699151-26699170 | None:intergenic | 40.0% | |
| CATTAGGTACGGTGTAAATC+GGG | + | chr8.3:26700184-26700203 | MS.gene87452:intron | 40.0% | |
| CATTGACACTTCTCATCCAA+GGG | + | chr8.3:26698257-26698276 | MS.gene87452:intron | 40.0% | |
| CGACTTAATTCACACAGGAT+TGG | - | chr8.3:26699803-26699822 | None:intergenic | 40.0% | |
| CTAGTAAACTTCTGCTTTGG+AGG | - | chr8.3:26700002-26700021 | None:intergenic | 40.0% | |
| GAACCAAACATACAGTGAAC+TGG | - | chr8.3:26698669-26698688 | None:intergenic | 40.0% | |
| GAGTTACGTTCAATGTTGCT+GGG | + | chr8.3:26701002-26701021 | MS.gene87452:CDS | 40.0% | |
| GAGTTTCTCTGTAAGAGCTT+TGG | - | chr8.3:26701504-26701523 | None:intergenic | 40.0% | |
| GATAACCTGGGTACCTATTA+AGG | + | chr8.3:26699884-26699903 | MS.gene87452:intron | 40.0% | |
| GATGTCTGAGAAATGAGTGA+AGG | - | chr8.3:26701338-26701357 | None:intergenic | 40.0% | |
| GGAAATGAAGCAAACCTTGA+AGG | - | chr8.3:26697781-26697800 | None:intergenic | 40.0% | |
| GGATCAACAGATACAGTGAT+GGG | + | chr8.3:26701473-26701492 | MS.gene87452:CDS | 40.0% | |
| TAAAAGAAAGCCCCCAAAGA+AGG | - | chr8.3:26701283-26701302 | None:intergenic | 40.0% | |
| TAGCATCATAATGTGAGCTG+GGG | - | chr8.3:26699619-26699638 | None:intergenic | 40.0% | |
| TATGAGGTTGCAATGGTTGA+AGG | - | chr8.3:26697850-26697869 | None:intergenic | 40.0% | |
| TCGTTCTCCACTCTCTTATA+TGG | + | chr8.3:26700042-26700061 | MS.gene87452:intron | 40.0% | |
| TGAAGCAAACCTTGAAGGAA+GGG | - | chr8.3:26697776-26697795 | None:intergenic | 40.0% | |
| TGGATCAACAGATACAGTGA+TGG | + | chr8.3:26701472-26701491 | MS.gene87452:CDS | 40.0% | |
| TGTAACATTAGCTGAGGCTA+AGG | + | chr8.3:26698117-26698136 | MS.gene87452:CDS | 40.0% | |
| TTCGAAAAACCCTTCCTTCA+AGG | + | chr8.3:26697764-26697783 | MS.gene87452:CDS | 40.0% | |
| TTGTAGGTTGTGGTATATCG+AGG | + | chr8.3:26700401-26700420 | MS.gene87452:intron | 40.0% | |
| TTGTGACCGGAAAACGTTAT+GGG | + | chr8.3:26700616-26700635 | MS.gene87452:CDS | 40.0% | |
| TTTCCTTGAAATACCAGACG+AGG | + | chr8.3:26700784-26700803 | MS.gene87452:CDS | 40.0% | |
| ! | AGACGAGGTCATTGATAATC+TGG | + | chr8.3:26700799-26700818 | MS.gene87452:CDS | 40.0% |
| ! | AGAGAGGTCGTAATTGATTC+TGG | + | chr8.3:26698696-26698715 | MS.gene87452:intron | 40.0% |
| ! | AGAGGAAGTTTATGGTCTTG+TGG | - | chr8.3:26699216-26699235 | None:intergenic | 40.0% |
| ! | AGGAGTAAAAGGGGTATAAC+GGG | - | chr8.3:26697802-26697821 | None:intergenic | 40.0% |
| ! | TCCGACTAAAAGTGAGTTGA+AGG | - | chr8.3:26698879-26698898 | None:intergenic | 40.0% |
| !! | AGGAAGTTTATGGTCTTGTG+GGG | - | chr8.3:26699214-26699233 | None:intergenic | 40.0% |
| !! | GAGGAAGTTTATGGTCTTGT+GGG | - | chr8.3:26699215-26699234 | None:intergenic | 40.0% |
| !! | GTTTGGTTCCACTTTTAGAG+AGG | + | chr8.3:26698680-26698699 | MS.gene87452:intron | 40.0% |
| AAAGAAAGCCCCCAAAGAAG+GGG | - | chr8.3:26701281-26701300 | None:intergenic | 45.0% | |
| ACTAGATGTTCCCTAGCCAT+GGG | + | chr8.3:26700017-26700036 | MS.gene87452:intron | 45.0% | |
| AGCATCATAATGTGAGCTGG+GGG | - | chr8.3:26699618-26699637 | None:intergenic | 45.0% | |
| AGGCTGATGCTATTGTGCAA+AGG | + | chr8.3:26699342-26699361 | MS.gene87452:intron | 45.0% | |
| ATACCTAGAGTCTCCCAGTT+GGG | + | chr8.3:26699770-26699789 | MS.gene87452:intron | 45.0% | |
| ATCTGTGTGATCCTTGTGGT+AGG | + | chr8.3:26701448-26701467 | MS.gene87452:intron | 45.0% | |
| CCACTAGTGAGAAAGAAGCA+CGG | + | chr8.3:26700441-26700460 | MS.gene87452:CDS | 45.0% | |
| CCTCCAATTGACCATCAGTA+AGG | - | chr8.3:26699370-26699389 | None:intergenic | 45.0% | |
| CCTTACTGATGGTCAATTGG+AGG | + | chr8.3:26699367-26699386 | MS.gene87452:CDS | 45.0% | |
| CGTGCTTCTTTCTCACTAGT+GGG | - | chr8.3:26700443-26700462 | None:intergenic | 45.0% | |
| CTAACCACTGCATCCACAAA+AGG | - | chr8.3:26701058-26701077 | None:intergenic | 45.0% | |
| CTTGACCTTAATAGGTACCC+AGG | - | chr8.3:26699892-26699911 | None:intergenic | 45.0% | |
| CTTGTGACCGGAAAACGTTA+TGG | + | chr8.3:26700615-26700634 | MS.gene87452:CDS | 45.0% | |
| GAAGAAGAAAGCCGTGACTT+CGG | + | chr8.3:26699528-26699547 | MS.gene87452:intron | 45.0% | |
| GAGGGAAAAGCCTGAAGATT+TGG | + | chr8.3:26698093-26698112 | MS.gene87452:CDS | 45.0% | |
| GCTCCTTACTGATGGTCAAT+TGG | + | chr8.3:26699364-26699383 | MS.gene87452:CDS | 45.0% | |
| GGAGCTTCTCAGATTGATGA+TGG | + | chr8.3:26700980-26700999 | MS.gene87452:intron | 45.0% | |
| GGAGTTACGTTCAATGTTGC+TGG | + | chr8.3:26701001-26701020 | MS.gene87452:CDS | 45.0% | |
| GTCAGTCAAGTTATCTGCGA+AGG | - | chr8.3:26700732-26700751 | None:intergenic | 45.0% | |
| GTGTCAACACTGACACGATA+CGG | + | chr8.3:26698291-26698310 | MS.gene87452:intron | 45.0% | |
| GTTACGTTCAATGTTGCTGG+GGG | + | chr8.3:26701004-26701023 | MS.gene87452:CDS | 45.0% | |
| TACTAGATGTTCCCTAGCCA+TGG | + | chr8.3:26700016-26700035 | MS.gene87452:intron | 45.0% | |
| TATACCTAGAGTCTCCCAGT+TGG | + | chr8.3:26699769-26699788 | MS.gene87452:intron | 45.0% | |
| TCCACAAAAGGCAACGTCAA+TGG | - | chr8.3:26701046-26701065 | None:intergenic | 45.0% | |
| TGACCTCGTCTGGTATTTCA+AGG | - | chr8.3:26700790-26700809 | None:intergenic | 45.0% | |
| TGGGCTCTTCTTCAAAAGCT+CGG | + | chr8.3:26697909-26697928 | MS.gene87452:CDS | 45.0% | |
| TGTGACCGGAAAACGTTATG+GGG | + | chr8.3:26700617-26700636 | MS.gene87452:CDS | 45.0% | |
| TGTTGATCCAACCTACCACA+AGG | - | chr8.3:26701462-26701481 | None:intergenic | 45.0% | |
| TGTTTCAGGGTGATGTACTG+TGG | + | chr8.3:26701391-26701410 | MS.gene87452:intron | 45.0% | |
| TTGTGATATGACTCTCCTCC+CGG | + | chr8.3:26699730-26699749 | MS.gene87452:intron | 45.0% | |
| ! | CACTAGTGAGAAAGAAGCAC+GGG | + | chr8.3:26700442-26700461 | MS.gene87452:CDS | 45.0% |
| ! | CATAACGTTTTCCGGTCACA+AGG | - | chr8.3:26700617-26700636 | None:intergenic | 45.0% |
| ! | GAGGTCGTAATTGATTCTGG+AGG | + | chr8.3:26698699-26698718 | MS.gene87452:intron | 45.0% |
| ! | GCATTGACACTTCTCATCCA+AGG | + | chr8.3:26698256-26698275 | MS.gene87452:intron | 45.0% |
| ! | TCCATTGACGTTGCCTTTTG+TGG | + | chr8.3:26701042-26701061 | MS.gene87452:CDS | 45.0% |
| !! | AAAATTAAAAAAAAAAAAAG+TGG | + | chr8.3:26699942-26699961 | MS.gene87452:intron | 5.0% |
| AACATCCTGCTTCCTGCTTG+GGG | + | chr8.3:26699823-26699842 | MS.gene87452:intron | 50.0% | |
| ACACAAAGGGCCTAGTTGTG+GGG | + | chr8.3:26699862-26699881 | MS.gene87452:intron | 50.0% | |
| AGACACTAACACGTCGTCAC+TGG | - | chr8.3:26698361-26698380 | None:intergenic | 50.0% | |
| AGCTGTGGTTGGATCTGTTG+TGG | + | chr8.3:26700584-26700603 | MS.gene87452:CDS | 50.0% | |
| CATCATAATGTGAGCTGGGG+GGG | - | chr8.3:26699616-26699635 | None:intergenic | 50.0% | |
| CCGTGCTTCTTTCTCACTAG+TGG | - | chr8.3:26700444-26700463 | None:intergenic | 50.0% | |
| CCTAGTTGTGGGGATAACCT+GGG | + | chr8.3:26699872-26699891 | MS.gene87452:intron | 50.0% | |
| CGGAAAACGTTATGGGGGAT+GGG | + | chr8.3:26700623-26700642 | MS.gene87452:CDS | 50.0% | |
| GAACATCCTGCTTCCTGCTT+GGG | + | chr8.3:26699822-26699841 | MS.gene87452:intron | 50.0% | |
| GAAGCACGGGAGTTTGTCAA+AGG | + | chr8.3:26700455-26700474 | MS.gene87452:CDS | 50.0% | |
| GACACAAAGGGCCTAGTTGT+GGG | + | chr8.3:26699861-26699880 | MS.gene87452:intron | 50.0% | |
| GACACATGTTAGACACCCCT+TGG | - | chr8.3:26698276-26698295 | None:intergenic | 50.0% | |
| GCATCATAATGTGAGCTGGG+GGG | - | chr8.3:26699617-26699636 | None:intergenic | 50.0% | |
| GTGACCGGAAAACGTTATGG+GGG | + | chr8.3:26700618-26700637 | MS.gene87452:CDS | 50.0% | |
| GTGCAAAGGCTCCTTACTGA+TGG | + | chr8.3:26699356-26699375 | MS.gene87452:CDS | 50.0% | |
| GTGGTGACTAACCTTGTGAC+CGG | + | chr8.3:26700603-26700622 | MS.gene87452:CDS | 50.0% | |
| GTGTGATCCTTGTGGTAGGT+TGG | + | chr8.3:26701452-26701471 | MS.gene87452:intron | 50.0% | |
| TTAATCCCCAAGCAGGAAGC+AGG | - | chr8.3:26699831-26699850 | None:intergenic | 50.0% | |
| ! | AACTCAGGTTCTTTTCCGGG+AGG | - | chr8.3:26699748-26699767 | None:intergenic | 50.0% |
| ! | CCATCCCCCATAACGTTTTC+CGG | - | chr8.3:26700625-26700644 | None:intergenic | 50.0% |
| ! | GTTGCCTTTTGTGGATGCAG+TGG | + | chr8.3:26701051-26701070 | MS.gene87452:CDS | 50.0% |
| !!! | AGGCCCCCCTTTTTTGTTGT+TGG | + | chr8.3:26700492-26700511 | MS.gene87452:intron | 50.0% |
| AGAGTGGAGAACGAAGCCCA+TGG | - | chr8.3:26700036-26700055 | None:intergenic | 55.0% | |
| CAGATCCAACCACAGCTGCA+TGG | - | chr8.3:26700581-26700600 | None:intergenic | 55.0% | |
| CCCAGGTTATCCCCACAACT+AGG | - | chr8.3:26699875-26699894 | None:intergenic | 55.0% | |
| CCGGAAAACGTTATGGGGGA+TGG | + | chr8.3:26700622-26700641 | MS.gene87452:CDS | 55.0% | |
| CGAACATCCTGCTTCCTGCT+TGG | + | chr8.3:26699821-26699840 | MS.gene87452:intron | 55.0% | |
| GAGAACGAAGCCCATGGCTA+GGG | - | chr8.3:26700030-26700049 | None:intergenic | 55.0% | |
| GATTGGACTGCCTCCCAACT+GGG | - | chr8.3:26699786-26699805 | None:intergenic | 55.0% | |
| GCCTAGTTGTGGGGATAACC+TGG | + | chr8.3:26699871-26699890 | MS.gene87452:intron | 55.0% | |
| GGACACAAAGGGCCTAGTTG+TGG | + | chr8.3:26699860-26699879 | MS.gene87452:intron | 55.0% | |
| TGTTGCTGGGGGTTTGATGC+TGG | + | chr8.3:26701015-26701034 | MS.gene87452:CDS | 55.0% | |
| CCTAGAGTCTCCCAGTTGGG+AGG | + | chr8.3:26699773-26699792 | MS.gene87452:intron | 60.0% | |
| CCTCCCAACTGGGAGACTCT+AGG | - | chr8.3:26699776-26699795 | None:intergenic | 60.0% | |
| GGAGAACGAAGCCCATGGCT+AGG | - | chr8.3:26700031-26700050 | None:intergenic | 60.0% | |
| GGATTGGACTGCCTCCCAAC+TGG | - | chr8.3:26699787-26699806 | None:intergenic | 60.0% | |
| GGTAGCCATGCAGCTGTGGT+TGG | + | chr8.3:26700573-26700592 | MS.gene87452:CDS | 60.0% | |
| TTCGGGTAGCCATGCAGCTG+TGG | + | chr8.3:26700569-26700588 | MS.gene87452:CDS | 60.0% | |
| ! | TGGGGGATGGGAGAGTGCAG+AGG | + | chr8.3:26700635-26700654 | MS.gene87452:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 26697759 | 26701541 | 26697759 | ID=MS.gene87452 |
| chr8.3 | mRNA | 26697759 | 26701541 | 26697759 | ID=MS.gene87452.t1;Parent=MS.gene87452 |
| chr8.3 | exon | 26697759 | 26697785 | 26697759 | ID=MS.gene87452.t1.exon1;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26697759 | 26697785 | 26697759 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26697902 | 26697973 | 26697902 | ID=MS.gene87452.t1.exon2;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26697902 | 26697973 | 26697902 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26698064 | 26698138 | 26698064 | ID=MS.gene87452.t1.exon3;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26698064 | 26698138 | 26698064 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26699344 | 26699427 | 26699344 | ID=MS.gene87452.t1.exon4;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26699344 | 26699427 | 26699344 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26700407 | 26700476 | 26700407 | ID=MS.gene87452.t1.exon5;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26700407 | 26700476 | 26700407 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26700565 | 26700656 | 26700565 | ID=MS.gene87452.t1.exon6;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26700565 | 26700656 | 26700565 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26700779 | 26700820 | 26700779 | ID=MS.gene87452.t1.exon7;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26700779 | 26700820 | 26700779 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26700992 | 26701072 | 26700992 | ID=MS.gene87452.t1.exon8;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26700992 | 26701072 | 26700992 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| chr8.3 | exon | 26701470 | 26701541 | 26701470 | ID=MS.gene87452.t1.exon9;Parent=MS.gene87452.t1 |
| chr8.3 | CDS | 26701470 | 26701541 | 26701470 | ID=cds.MS.gene87452.t1;Parent=MS.gene87452.t1 |
| Gene Sequence |
| Protein sequence |
