Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88831.t1 | XP_013469537.1 | 89.8 | 423 | 43 | 0 | 1 | 423 | 19 | 441 | 3.30E-174 | 621.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88831.t1 | Q8VZ14 | 56.6 | 433 | 177 | 2 | 1 | 423 | 17 | 448 | 2.0e-124 | 447.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88831.t1 | A0A072VZT8 | 89.8 | 423 | 43 | 0 | 1 | 423 | 19 | 441 | 2.4e-174 | 621.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene88831 | -0.839019 | 2.04E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene88831 | -0.844691 | 6.46E-59 | -1.69E-46 |
| MS.gene049669 | MS.gene88831 | -0.816231 | 6.15E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene88831 | -0.808219 | 3.45E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene88831 | -0.848046 | 7.87E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene88831 | -0.875079 | 4.09E-68 | -1.69E-46 |
| MS.gene050228 | MS.gene88831 | -0.878825 | 2.05E-69 | -1.69E-46 |
| MS.gene050303 | MS.gene88831 | -0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene88831 | 0.831512 | 1.60E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene88831 | -0.819864 | 9.29E-53 | -1.69E-46 |
| MS.gene050623 | MS.gene88831 | 0.881749 | 1.85E-70 | -1.69E-46 |
| MS.gene050642 | MS.gene88831 | -0.829982 | 3.80E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene88831 | -0.831369 | 1.74E-55 | -1.69E-46 |
| MS.gene050721 | MS.gene88831 | -0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene88831 | -0.809098 | 2.24E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene88831 | -0.843508 | 1.34E-58 | -1.69E-46 |
| MS.gene051983 | MS.gene88831 | -0.817013 | 4.11E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene88831 | -0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene052048 | MS.gene88831 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene88831 | -0.868645 | 5.60E-66 | -1.69E-46 |
| MS.gene052302 | MS.gene88831 | -0.829661 | 4.54E-55 | -1.69E-46 |
| MS.gene052309 | MS.gene88831 | 0.821301 | 4.34E-53 | -1.69E-46 |
| MS.gene052358 | MS.gene88831 | 0.84545 | 4.03E-59 | -1.69E-46 |
| MS.gene052376 | MS.gene88831 | -0.842966 | 1.87E-58 | -1.69E-46 |
| MS.gene052389 | MS.gene88831 | -0.803709 | 3.06E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene88831 | -0.816612 | 5.06E-52 | -1.69E-46 |
| MS.gene053054 | MS.gene88831 | 0.830548 | 2.76E-55 | -1.69E-46 |
| MS.gene053340 | MS.gene88831 | -0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene053641 | MS.gene88831 | -0.800855 | 1.19E-48 | -1.69E-46 |
| MS.gene053811 | MS.gene88831 | -0.802054 | 6.73E-49 | -1.69E-46 |
| MS.gene05414 | MS.gene88831 | -0.803671 | 3.12E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene88831 | -0.80448 | 2.12E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene88831 | 0.81104 | 8.54E-51 | -1.69E-46 |
| MS.gene054468 | MS.gene88831 | -0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene05468 | MS.gene88831 | -0.827119 | 1.87E-54 | -1.69E-46 |
| MS.gene054942 | MS.gene88831 | -0.854495 | 1.19E-61 | -1.69E-46 |
| MS.gene055603 | MS.gene88831 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene055816 | MS.gene88831 | 0.803093 | 4.11E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene88831 | 0.850043 | 2.19E-60 | -1.69E-46 |
| MS.gene056091 | MS.gene88831 | -0.812878 | 3.40E-51 | -1.69E-46 |
| MS.gene056403 | MS.gene88831 | -0.807528 | 4.84E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene88831 | -0.831394 | 1.71E-55 | -1.69E-46 |
| MS.gene056552 | MS.gene88831 | -0.817457 | 3.27E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene88831 | -0.813134 | 2.99E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene88831 | -0.82907 | 6.32E-55 | -1.69E-46 |
| MS.gene057967 | MS.gene88831 | -0.81637 | 5.73E-52 | -1.69E-46 |
| MS.gene058911 | MS.gene88831 | -0.808856 | 2.52E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene88831 | -0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene88831 | -0.811338 | 7.36E-51 | -1.69E-46 |
| MS.gene06001 | MS.gene88831 | -0.804104 | 2.54E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene88831 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene88831 | -0.828751 | 7.55E-55 | -1.69E-46 |
| MS.gene060998 | MS.gene88831 | -0.803968 | 2.71E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene88831 | 0.876102 | 1.82E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88831.t1 | MTR_1g096780 | 98.345 | 423 | 7 | 0 | 1 | 423 | 19 | 441 | 0.0 | 845 |
| MS.gene88831.t1 | MTR_8g073120 | 31.783 | 129 | 69 | 7 | 152 | 269 | 36 | 156 | 2.47e-12 | 66.2 |
| MS.gene88831.t1 | MTR_2g035800 | 30.233 | 129 | 78 | 5 | 143 | 265 | 28 | 150 | 2.63e-12 | 65.1 |
| MS.gene88831.t1 | MTR_1g047180 | 37.179 | 78 | 44 | 2 | 182 | 259 | 652 | 724 | 4.56e-12 | 68.6 |
| MS.gene88831.t1 | MTR_5g026260 | 33.750 | 80 | 51 | 1 | 195 | 274 | 483 | 560 | 6.77e-12 | 67.8 |
| MS.gene88831.t1 | MTR_3g067995 | 52.830 | 53 | 24 | 1 | 216 | 268 | 212 | 263 | 1.60e-11 | 65.1 |
| MS.gene88831.t1 | MTR_4g064550 | 56.000 | 50 | 21 | 1 | 210 | 259 | 208 | 256 | 1.80e-11 | 64.7 |
| MS.gene88831.t1 | MTR_3g099650 | 31.148 | 122 | 71 | 6 | 149 | 259 | 59 | 178 | 1.90e-11 | 65.9 |
| MS.gene88831.t1 | MTR_4g064560 | 56.000 | 50 | 21 | 1 | 210 | 259 | 202 | 250 | 3.90e-11 | 63.9 |
| MS.gene88831.t1 | MTR_7g116180 | 32.374 | 139 | 71 | 6 | 142 | 259 | 2 | 138 | 7.07e-11 | 61.2 |
| MS.gene88831.t1 | MTR_7g116220 | 31.111 | 135 | 64 | 5 | 153 | 259 | 8 | 141 | 7.84e-11 | 61.2 |
| MS.gene88831.t1 | MTR_6g007680 | 35.345 | 116 | 62 | 6 | 147 | 259 | 3 | 108 | 9.77e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88831.t1 | AT1G71980 | 66.513 | 433 | 134 | 3 | 1 | 423 | 17 | 448 | 0.0 | 526 |
| MS.gene88831.t1 | AT4G09560 | 51.474 | 441 | 181 | 11 | 2 | 421 | 18 | 446 | 1.82e-126 | 373 |
| MS.gene88831.t1 | AT1G35630 | 56.794 | 287 | 124 | 0 | 1 | 287 | 17 | 303 | 4.82e-117 | 344 |
| MS.gene88831.t1 | AT1G22670 | 47.917 | 432 | 182 | 11 | 3 | 422 | 22 | 422 | 2.87e-114 | 341 |
| MS.gene88831.t1 | AT1G35625 | 56.463 | 294 | 114 | 2 | 1 | 287 | 17 | 303 | 5.75e-114 | 337 |
| MS.gene88831.t1 | AT5G66160 | 44.361 | 266 | 138 | 5 | 1 | 264 | 22 | 279 | 2.71e-66 | 214 |
| MS.gene88831.t1 | AT5G66160 | 44.361 | 266 | 138 | 5 | 1 | 264 | 22 | 279 | 6.55e-66 | 213 |
| MS.gene88831.t1 | AT4G09120 | 29.545 | 220 | 139 | 7 | 144 | 356 | 47 | 257 | 9.37e-14 | 72.4 |
| MS.gene88831.t1 | AT5G07225 | 38.356 | 73 | 40 | 2 | 190 | 262 | 165 | 232 | 2.64e-12 | 66.6 |
| MS.gene88831.t1 | AT1G33480 | 32.432 | 148 | 86 | 7 | 190 | 326 | 75 | 219 | 1.16e-11 | 65.1 |
| MS.gene88831.t1 | AT3G18773 | 27.742 | 155 | 98 | 4 | 115 | 259 | 22 | 172 | 1.41e-11 | 64.3 |
| MS.gene88831.t1 | AT3G55530 | 54.000 | 50 | 22 | 1 | 216 | 265 | 210 | 258 | 1.42e-11 | 65.1 |
| MS.gene88831.t1 | AT1G20823 | 38.889 | 72 | 42 | 2 | 190 | 260 | 84 | 154 | 4.42e-11 | 62.4 |
| MS.gene88831.t1 | AT4G09100 | 37.662 | 77 | 44 | 3 | 186 | 259 | 52 | 127 | 5.29e-11 | 60.5 |
| MS.gene88831.t1 | AT3G10910 | 40.278 | 72 | 40 | 3 | 190 | 260 | 88 | 157 | 5.39e-11 | 61.6 |
Find 101 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTGCCTGTGTGGATTCT+TGG | 0.196122 | 1.1:-69596930 | MS.gene88831:CDS |
| TCATCTTCAGCAATACAAAT+TGG | 0.282025 | 1.1:-69596754 | MS.gene88831:CDS |
| CTTGCATCACGCTTGCAAAC+TGG | 0.302893 | 1.1:+69596883 | None:intergenic |
| TGTGTGAAGCTAGAGATCTT+TGG | 0.332608 | 1.1:+69596599 | None:intergenic |
| GATGATATTGAAGCTAATTT+CGG | 0.338035 | 1.1:-69599728 | MS.gene88831:intron |
| CAGAGCTACGGCTGAAGCTT+AGG | 0.338278 | 1.1:+69596641 | None:intergenic |
| GCTCCATCGGTCAAAGGTTC+TGG | 0.338386 | 1.1:-69598951 | MS.gene88831:CDS |
| TCTCATGTTCGTGAATTTCA+TGG | 0.340632 | 1.1:-69597882 | MS.gene88831:CDS |
| AAGAGGCTCTGCCAAGAATA+AGG | 0.342445 | 1.1:+69598917 | None:intergenic |
| TGCGTCTGCCAACTCCCTTC+CGG | 0.343050 | 1.1:-69596407 | MS.gene88831:CDS |
| TGGATTCTTGGCTTACTTCA+TGG | 0.348035 | 1.1:-69596918 | MS.gene88831:CDS |
| GCTGCTAAGGTTGTGTTGAT+TGG | 0.367855 | 1.1:-69599773 | MS.gene88831:CDS |
| GTATTTGTTTCAAAAGCTTC+GGG | 0.371506 | 1.1:-69598089 | MS.gene88831:CDS |
| GGGGTGTAGCTTTGAGGAAA+AGG | 0.371973 | 1.1:-69598817 | MS.gene88831:CDS |
| GGTATTTGTTTCAAAAGCTT+CGG | 0.372526 | 1.1:-69598090 | MS.gene88831:CDS |
| CTTAGAGAAGGCTGATTGTA+AGG | 0.389822 | 1.1:+69596685 | None:intergenic |
| GTTAGCTATGTCTGCAGTGC+TGG | 0.390348 | 1.1:-69597961 | MS.gene88831:CDS |
| CTCCAGCGCAATAATCTTCA+AGG | 0.399738 | 1.1:+69597769 | None:intergenic |
| CCACTTGTTTCTTCGTCCGC+AGG | 0.412166 | 1.1:-69597938 | MS.gene88831:CDS |
| GCACTGCAGACATAGCTAAC+AGG | 0.412818 | 1.1:+69597964 | None:intergenic |
| GAGTGGATGCTGCTGATGAC+TGG | 0.415213 | 1.1:+69596465 | None:intergenic |
| AGAATACGGAGCCTTATTCT+TGG | 0.417360 | 1.1:-69598928 | MS.gene88831:CDS |
| CTGCTAAGGTTGTGTTGATT+GGG | 0.421036 | 1.1:-69599772 | MS.gene88831:CDS |
| TTGCATCACGCTTGCAAACT+GGG | 0.424562 | 1.1:+69596884 | None:intergenic |
| GCGTGATGCAAGAACGGGTC+TGG | 0.427986 | 1.1:-69596872 | MS.gene88831:CDS |
| GCCGTAGCTCTGTGGATCTT+AGG | 0.428506 | 1.1:-69596630 | MS.gene88831:CDS |
| GTGTGCTATGGCGGCTGCTA+AGG | 0.439742 | 1.1:-69599786 | None:intergenic |
| GTGTGAAGCTAGAGATCTTT+GGG | 0.442142 | 1.1:+69596600 | None:intergenic |
| AAGAGGATGCCGCAGATGAC+GGG | 0.460435 | 1.1:+69596806 | None:intergenic |
| CTTACAATCAGCCTTCTCTA+AGG | 0.462445 | 1.1:-69596684 | MS.gene88831:CDS |
| TGCCTTGAAGATTATTGCGC+TGG | 0.467679 | 1.1:-69597771 | MS.gene88831:CDS |
| AGAGCTACGGCTGAAGCTTA+GGG | 0.468094 | 1.1:+69596642 | None:intergenic |
| AATTGAACAATTCAACATTC+CGG | 0.470205 | 1.1:+69596388 | None:intergenic |
| ACGCTTGCAAACTGGGCAAA+AGG | 0.471145 | 1.1:+69596891 | None:intergenic |
| AAACTTACTGAAGCATTGCT+TGG | 0.472660 | 1.1:+69596499 | None:intergenic |
| TGCAAGCGTGATGCAAGAAC+GGG | 0.474555 | 1.1:-69596877 | MS.gene88831:CDS |
| TTGAGGCTGACTCACTATAT+CGG | 0.477494 | 1.1:+69596443 | None:intergenic |
| GTCAAAGGTTCTGGAGAATA+CGG | 0.481854 | 1.1:-69598942 | MS.gene88831:CDS |
| ACTGAAGCATTGCTTGGACT+TGG | 0.496274 | 1.1:+69596505 | None:intergenic |
| CGAACATGAGAAGAAGTTTG+AGG | 0.503157 | 1.1:+69597894 | None:intergenic |
| GTAGCTTTGAGGAAAAGGTT+AGG | 0.503932 | 1.1:-69598812 | MS.gene88831:CDS |
| ACGGCTGAAGCTTAGGGAGG+GGG | 0.504414 | 1.1:+69596648 | None:intergenic |
| TCAACATTCCGGAAGGGAGT+TGG | 0.506625 | 1.1:+69596399 | None:intergenic |
| CCTCTAACCATCAAAACAAA+AGG | 0.508806 | 1.1:+69598840 | None:intergenic |
| GTTAGGATTGCACAAAGTGC+TGG | 0.514958 | 1.1:-69598795 | MS.gene88831:CDS |
| ATGAATTCACCGCGTTCCAT+CGG | 0.515963 | 1.1:-69596577 | MS.gene88831:CDS |
| AATGCTTCAGTAAGTTTCCT+CGG | 0.522483 | 1.1:-69596493 | MS.gene88831:CDS |
| AGGGAGTTGGCAGACGCAAA+TGG | 0.523123 | 1.1:+69596412 | None:intergenic |
| CAATGAAGATGGTGGCATCC+TGG | 0.526957 | 1.1:-69598748 | MS.gene88831:CDS |
| CCTCTTTCGTGTCTTCTATG+AGG | 0.529305 | 1.1:-69596789 | MS.gene88831:CDS |
| AAAGAGGATGCCGCAGATGA+CGG | 0.530793 | 1.1:+69596805 | None:intergenic |
| GGAAGACTTACTGTGACAGC+AGG | 0.533020 | 1.1:+69597728 | None:intergenic |
| TTGCAAGCGTGATGCAAGAA+CGG | 0.539276 | 1.1:-69596878 | MS.gene88831:CDS |
| TACGGCTGAAGCTTAGGGAG+GGG | 0.539291 | 1.1:+69596647 | None:intergenic |
| ATACACTGGTTTAACTAATG+TGG | 0.540905 | 1.1:-69598051 | MS.gene88831:CDS |
| TCCTAAGATCCACAGAGCTA+CGG | 0.545254 | 1.1:+69596629 | None:intergenic |
| AAACTCAGCATGGTCTATCA+TGG | 0.545970 | 1.1:-69598003 | MS.gene88831:CDS |
| ATTGCGCTGGAGAGAAACTC+AGG | 0.554269 | 1.1:-69597758 | MS.gene88831:CDS |
| TTAGAGAAGGCTGATTGTAA+GGG | 0.554606 | 1.1:+69596686 | None:intergenic |
| TCAGTGGCAGGAAATTCTGC+TGG | 0.554718 | 1.1:-69598128 | MS.gene88831:intron |
| ATTTCAGCTCCATCGGTCAA+AGG | 0.556014 | 1.1:-69598957 | MS.gene88831:intron |
| GTCATCAACCCCGTCATCTG+CGG | 0.562171 | 1.1:-69596815 | MS.gene88831:CDS |
| GAGTTAAGAGATGATAAAGA+TGG | 0.565530 | 1.1:+69596550 | None:intergenic |
| GAACAATTCAACATTCCGGA+AGG | 0.572328 | 1.1:+69596392 | None:intergenic |
| CACTGCAGACATAGCTAACA+GGG | 0.573295 | 1.1:+69597965 | None:intergenic |
| TCTCCAGAACCTTTGACCGA+TGG | 0.573751 | 1.1:+69598948 | None:intergenic |
| GCAATAATCTTCAAGGCAGA+TGG | 0.580122 | 1.1:+69597776 | None:intergenic |
| TGATAAAGATGGATAACCGA+TGG | 0.589393 | 1.1:+69596561 | None:intergenic |
| CCTCATAGAAGACACGAAAG+AGG | 0.590401 | 1.1:+69596789 | None:intergenic |
| ATTGTCTATGACAATGAAGA+TGG | 0.598093 | 1.1:-69598759 | MS.gene88831:CDS |
| AAGCTTCAGCCGTAGCTCTG+TGG | 0.606819 | 1.1:-69596638 | MS.gene88831:CDS |
| GGTTGATGACAGCAGAGGTG+TGG | 0.607896 | 1.1:+69596828 | None:intergenic |
| GGCATCGCATACGAAGAGAA+AGG | 0.608323 | 1.1:-69597917 | MS.gene88831:CDS |
| GTTTAACTAATGTGGAAACA+TGG | 0.611755 | 1.1:-69598043 | MS.gene88831:CDS |
| AACAATTCAACATTCCGGAA+GGG | 0.612915 | 1.1:+69596393 | None:intergenic |
| AAGGGGTACTTGCTAAAGAG+TGG | 0.614377 | 1.1:+69596704 | None:intergenic |
| AGAGGATGCCGCAGATGACG+GGG | 0.616002 | 1.1:+69596807 | None:intergenic |
| GCTACGGCTGAAGCTTAGGG+AGG | 0.617291 | 1.1:+69596645 | None:intergenic |
| AGAGTTTCATGCTGCCTGTG+TGG | 0.623183 | 1.1:-69596938 | MS.gene88831:CDS |
| AGTTCTGTACATGCATCAAG+AGG | 0.627860 | 1.1:+69598900 | None:intergenic |
| CTACGGCTGAAGCTTAGGGA+GGG | 0.629238 | 1.1:+69596646 | None:intergenic |
| TGACGGTAGGACCTTAGAGA+AGG | 0.630058 | 1.1:+69596673 | None:intergenic |
| CTTGGACTTGGAATGTGTGA+AGG | 0.631090 | 1.1:+69596517 | None:intergenic |
| GAAATACTAAAGAAATACAC+TGG | 0.632691 | 1.1:-69598065 | MS.gene88831:CDS |
| TGCTGGTATAAGAATACATG+CGG | 0.638072 | 1.1:-69598111 | MS.gene88831:CDS |
| TAGAGAAGGCTGATTGTAAG+GGG | 0.638407 | 1.1:+69596687 | None:intergenic |
| GGTGTGGATTCTGAAGGTGG+TGG | 0.642431 | 1.1:+69596844 | None:intergenic |
| CTCTTCGTATGCGATGCCTG+CGG | 0.646212 | 1.1:+69597922 | None:intergenic |
| ATTGGTCATTACTTGCAACC+AGG | 0.654527 | 1.1:+69598730 | None:intergenic |
| GATGGATAACCGATGGAACG+CGG | 0.656285 | 1.1:+69596568 | None:intergenic |
| CGCAAATGGTGAGAAGCTTG+AGG | 0.656667 | 1.1:+69596426 | None:intergenic |
| AGAGGTGTGGATTCTGAAGG+TGG | 0.668803 | 1.1:+69596841 | None:intergenic |
| GAAGACTTACTGTGACAGCA+GGG | 0.683669 | 1.1:+69597729 | None:intergenic |
| GACGGGGTTGATGACAGCAG+AGG | 0.693540 | 1.1:+69596823 | None:intergenic |
| AGCAGAGGTGTGGATTCTGA+AGG | 0.694144 | 1.1:+69596838 | None:intergenic |
| CCTGCGGACGAAGAAACAAG+TGG | 0.703165 | 1.1:+69597938 | None:intergenic |
| GTCTATGACAATGAAGATGG+TGG | 0.704480 | 1.1:-69598756 | MS.gene88831:CDS |
| GCTGACTCACTATATCGGAG+TGG | 0.710724 | 1.1:+69596448 | None:intergenic |
| GCTGATGACTGGATGAACCG+AGG | 0.715695 | 1.1:+69596476 | None:intergenic |
| TTACGAGAAACAGATTGCGA+CGG | 0.739626 | 1.1:+69596727 | None:intergenic |
| AGTAAGCCAAGAATCCACAC+AGG | 0.748693 | 1.1:+69596924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATAATCAAATGATTT+TGG | + | chr1.1:69598864-69598883 | None:intergenic | 10.0% |
| !! | GATAAATTATAATTTCTGAT+TGG | - | chr1.1:69598014-69598033 | MS.gene88831:CDS | 15.0% |
| !! | TTTAATCACAAAAATAAATC+CGG | + | chr1.1:69597055-69597074 | None:intergenic | 15.0% |
| !!! | TTGTTATGTCTTTTTTTTTA+TGG | + | chr1.1:69597696-69597715 | None:intergenic | 15.0% |
| !!! | TTTTTATCCTATATTGTATT+TGG | + | chr1.1:69597872-69597891 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTCTTTATTAGAT+AGG | + | chr1.1:69596617-69596636 | None:intergenic | 15.0% |
| !! | AAATTATAATTTCTGATTGG+TGG | - | chr1.1:69598017-69598036 | MS.gene88831:CDS | 20.0% |
| !! | AATACACTGAATTTGAAAAA+GGG | + | chr1.1:69598491-69598510 | None:intergenic | 20.0% |
| !! | ACTTATATTAGGTAACATTA+TGG | - | chr1.1:69596801-69596820 | MS.gene88831:CDS | 20.0% |
| !! | GCAATAATGTAAAATCTATA+AGG | - | chr1.1:69597903-69597922 | MS.gene88831:CDS | 20.0% |
| !! | TAGGATAAAAAATTGAAACT+TGG | - | chr1.1:69597881-69597900 | MS.gene88831:CDS | 20.0% |
| !! | TGATAATCCAAATACAATAT+AGG | - | chr1.1:69597862-69597881 | MS.gene88831:CDS | 20.0% |
| !! | TTCATTATTACAATATCTCT+TGG | - | chr1.1:69597770-69597789 | MS.gene88831:CDS | 20.0% |
| !! | TTTGAAAAAGGGAAAAAAAT+TGG | + | chr1.1:69598480-69598499 | None:intergenic | 20.0% |
| !!! | AAATAATTTCTATTCTGAGA+CGG | - | chr1.1:69598765-69598784 | MS.gene88831:CDS | 20.0% |
| !!! | ATTAAATTTGTGCTTTGTTT+GGG | - | chr1.1:69597069-69597088 | MS.gene88831:intron | 20.0% |
| !!! | TGAAATTATTTTACAGAAGT+TGG | - | chr1.1:69597739-69597758 | MS.gene88831:CDS | 20.0% |
| !!! | TGAATAGGATTTTGATTTTA+TGG | - | chr1.1:69596530-69596549 | MS.gene88831:CDS | 20.0% |
| !!! | TTCTAATTCAATTTTTTTCC+TGG | - | chr1.1:69599205-69599224 | MS.gene88831:intron | 20.0% |
| ! | AAAAAAGAAAGAGAGAGAAA+AGG | - | chr1.1:69596632-69596651 | MS.gene88831:CDS | 25.0% |
| ! | AAAAGGGAAAAAAATTGGAA+TGG | + | chr1.1:69598475-69598494 | None:intergenic | 25.0% |
| ! | AAAGGGAAAAAAATTGGAAT+GGG | + | chr1.1:69598474-69598493 | None:intergenic | 25.0% |
| ! | AATTTATCAGAATATGACTC+AGG | + | chr1.1:69598002-69598021 | None:intergenic | 25.0% |
| ! | ACAAAGAAAAACAAGAAACT+AGG | + | chr1.1:69599061-69599080 | None:intergenic | 25.0% |
| ! | ATAAATCCGGAATTTATCTT+AGG | + | chr1.1:69597042-69597061 | None:intergenic | 25.0% |
| ! | ATGTACTAGTAACTTCAAAA+CGG | + | chr1.1:69599151-69599170 | None:intergenic | 25.0% |
| ! | ATGTTGCTACATAAAACAAT+TGG | + | chr1.1:69597469-69597488 | None:intergenic | 25.0% |
| ! | CAATACACTGAATTTGAAAA+AGG | + | chr1.1:69598492-69598511 | None:intergenic | 25.0% |
| ! | CACAGTTCAAACAAATTAAA+TGG | + | chr1.1:69598941-69598960 | None:intergenic | 25.0% |
| ! | GAAATACTAAAGAAATACAC+TGG | - | chr1.1:69598113-69598132 | MS.gene88831:CDS | 25.0% |
| ! | GATGATATTGAAGCTAATTT+CGG | - | chr1.1:69596450-69596469 | MS.gene88831:CDS | 25.0% |
| ! | TACTGTGTGCAATTTATTAT+TGG | - | chr1.1:69598544-69598563 | MS.gene88831:intron | 25.0% |
| ! | TATAAATGCCAGTTATTATC+TGG | - | chr1.1:69598636-69598655 | MS.gene88831:intron | 25.0% |
| ! | TATAGTATTGCATTTGATTG+TGG | - | chr1.1:69597148-69597167 | MS.gene88831:intron | 25.0% |
| ! | TATATTCCGGAATTTATCTT+AGG | + | chr1.1:69597010-69597029 | None:intergenic | 25.0% |
| ! | TGTGCAATTTATTATTGGAT+TGG | - | chr1.1:69598549-69598568 | MS.gene88831:intron | 25.0% |
| ! | TTATTACAATATCTCTTGGA+AGG | - | chr1.1:69597774-69597793 | MS.gene88831:CDS | 25.0% |
| ! | TTGGTTGTTGTACTTATATT+AGG | - | chr1.1:69596790-69596809 | MS.gene88831:CDS | 25.0% |
| ! | TTTATGGAATTTGTGACTAT+TGG | - | chr1.1:69596546-69596565 | MS.gene88831:CDS | 25.0% |
| ! | TTTCAAATTCAGTGTATTGT+TGG | - | chr1.1:69598493-69598512 | MS.gene88831:intron | 25.0% |
| !! | AAGTATATGCTTTAAGTCTA+TGG | + | chr1.1:69596981-69597000 | None:intergenic | 25.0% |
| !! | GATTAAATTTGTGCTTTGTT+TGG | - | chr1.1:69597068-69597087 | MS.gene88831:intron | 25.0% |
| !! | TCTAGAATATAACTATAGAG+AGG | + | chr1.1:69596915-69596934 | None:intergenic | 25.0% |
| !! | TCTCTTTTTGTTAACATGAA+TGG | - | chr1.1:69597192-69597211 | MS.gene88831:intron | 25.0% |
| !!! | CATTTAATTTGTTTGAACTG+TGG | - | chr1.1:69598939-69598958 | MS.gene88831:CDS | 25.0% |
| !!! | TTAAATTTGTGCTTTGTTTG+GGG | - | chr1.1:69597070-69597089 | MS.gene88831:intron | 25.0% |
| !!! | TTTGATTTTTACTTCTGCTT+TGG | - | chr1.1:69598352-69598371 | MS.gene88831:intron | 25.0% |
| AAAAAATGCTGACCAAAAAC+AGG | - | chr1.1:69598886-69598905 | MS.gene88831:CDS | 30.0% | |
| AAAAGGATTTGAATTGATGC+TGG | - | chr1.1:69596649-69596668 | MS.gene88831:CDS | 30.0% | |
| AAAGTTAACACCAATGTGTA+AGG | + | chr1.1:69598605-69598624 | None:intergenic | 30.0% | |
| AATATGTCAACAAACAGTTG+AGG | - | chr1.1:69596672-69596691 | MS.gene88831:CDS | 30.0% | |
| AATTTGTGTTTCCTTTGTGA+TGG | - | chr1.1:69596934-69596953 | MS.gene88831:CDS | 30.0% | |
| ACAATAAAACCAAAGAGACA+TGG | + | chr1.1:69598719-69598738 | None:intergenic | 30.0% | |
| ACTATTGGAAATTCTTACAC+TGG | - | chr1.1:69596561-69596580 | MS.gene88831:CDS | 30.0% | |
| AGAAAAACAAGAAACTAGGA+AGG | + | chr1.1:69599057-69599076 | None:intergenic | 30.0% | |
| ATTGTCTATGACAATGAAGA+TGG | - | chr1.1:69597419-69597438 | MS.gene88831:intron | 30.0% | |
| GAAATCAATCCAACAAGAAA+TGG | + | chr1.1:69597939-69597958 | None:intergenic | 30.0% | |
| GACTAAACTGATGATATACT+GGG | + | chr1.1:69599006-69599025 | None:intergenic | 30.0% | |
| GAGTTAAGAGATGATAAAGA+TGG | + | chr1.1:69599631-69599650 | None:intergenic | 30.0% | |
| GCAGAAGTAAAAATCAAACT+TGG | + | chr1.1:69598350-69598369 | None:intergenic | 30.0% | |
| GGTATTTGTTTCAAAAGCTT+CGG | - | chr1.1:69598088-69598107 | MS.gene88831:CDS | 30.0% | |
| GTATTTGTTTCAAAAGCTTC+GGG | - | chr1.1:69598089-69598108 | MS.gene88831:CDS | 30.0% | |
| GTTTAACTAATGTGGAAACA+TGG | - | chr1.1:69598135-69598154 | MS.gene88831:intron | 30.0% | |
| TCATCTTCAGCAATACAAAT+TGG | - | chr1.1:69599424-69599443 | MS.gene88831:intron | 30.0% | |
| TCATGTTAACAAAAAGAGAC+AGG | + | chr1.1:69597191-69597210 | None:intergenic | 30.0% | |
| TGTACTAGTAACTTCAAAAC+GGG | + | chr1.1:69599150-69599169 | None:intergenic | 30.0% | |
| ! | GCAAAAACGTTTCTAGATAA+TGG | + | chr1.1:69597622-69597641 | None:intergenic | 30.0% |
| ! | TGATTTCAGCTAGTTTGAAT+AGG | - | chr1.1:69596515-69596534 | MS.gene88831:CDS | 30.0% |
| !! | ATACACTGGTTTAACTAATG+TGG | - | chr1.1:69598127-69598146 | MS.gene88831:CDS | 30.0% |
| !!! | CTTTTGTTTTGATGGTTAGA+GGG | - | chr1.1:69597339-69597358 | MS.gene88831:intron | 30.0% |
| !!! | TAGTTCACCTTTTGTTTTGA+TGG | - | chr1.1:69597331-69597350 | MS.gene88831:intron | 30.0% |
| !!! | TGGTGGTTTTTTAATTTCAG+TGG | - | chr1.1:69598034-69598053 | MS.gene88831:CDS | 30.0% |
| !!! | TTGTTTTTTGCCTTCGAATT+TGG | - | chr1.1:69596479-69596498 | MS.gene88831:CDS | 30.0% |
| !!! | TTTTGTTTTGATGGTTAGAG+GGG | - | chr1.1:69597340-69597359 | MS.gene88831:intron | 30.0% |
| AAATGCTAATGTGAGTTGTC+TGG | - | chr1.1:69597550-69597569 | MS.gene88831:intron | 35.0% | |
| AACACAGAATCCAAATTCGA+AGG | + | chr1.1:69596492-69596511 | None:intergenic | 35.0% | |
| AATGCTTCAGTAAGTTTCCT+CGG | - | chr1.1:69599685-69599704 | MS.gene88831:intron | 35.0% | |
| ATGAGAATGTCTTTGTCATG+AGG | - | chr1.1:69598662-69598681 | MS.gene88831:intron | 35.0% | |
| CAACAAGAAATGGTCATCAA+TGG | + | chr1.1:69597929-69597948 | None:intergenic | 35.0% | |
| CATATGAAAGCCTTACACAT+TGG | - | chr1.1:69598592-69598611 | MS.gene88831:intron | 35.0% | |
| CCTCTAACCATCAAAACAAA+AGG | + | chr1.1:69597341-69597360 | None:intergenic | 35.0% | |
| CTCATTTGCCAGATAATAAC+TGG | + | chr1.1:69598647-69598666 | None:intergenic | 35.0% | |
| CTCTCGTATTGTTAAAGACA+AGG | + | chr1.1:69598976-69598995 | None:intergenic | 35.0% | |
| CTCTTGGAAGGAAAATATCA+GGG | - | chr1.1:69597786-69597805 | MS.gene88831:CDS | 35.0% | |
| GAAACAACATATCAATAGCC+AGG | + | chr1.1:69599105-69599124 | None:intergenic | 35.0% | |
| GCCATTCCTAAGATAAATTC+CGG | - | chr1.1:69597001-69597020 | MS.gene88831:intron | 35.0% | |
| GCTTTCATATGTCTCAACAA+AGG | + | chr1.1:69598583-69598602 | None:intergenic | 35.0% | |
| GGACTAAACTGATGATATAC+TGG | + | chr1.1:69599007-69599026 | None:intergenic | 35.0% | |
| GTGCATATTGAACAACATTC+TGG | - | chr1.1:69597826-69597845 | MS.gene88831:CDS | 35.0% | |
| TAGGAATGGCAAGTATATTC+CGG | + | chr1.1:69597023-69597042 | None:intergenic | 35.0% | |
| TCCGGAATTTATCTTAGGAA+TGG | + | chr1.1:69597005-69597024 | None:intergenic | 35.0% | |
| TCTCATGTTCGTGAATTTCA+TGG | - | chr1.1:69598296-69598315 | MS.gene88831:intron | 35.0% | |
| TCTCTTGGAAGGAAAATATC+AGG | - | chr1.1:69597785-69597804 | MS.gene88831:CDS | 35.0% | |
| TGATAAAGATGGATAACCGA+TGG | + | chr1.1:69599620-69599639 | None:intergenic | 35.0% | |
| TGCTGGTATAAGAATACATG+CGG | - | chr1.1:69598067-69598086 | MS.gene88831:CDS | 35.0% | |
| TTAGAGAAGGCTGATTGTAA+GGG | + | chr1.1:69599495-69599514 | None:intergenic | 35.0% | |
| TTCATCAGGGATAAAGGTAA+TGG | + | chr1.1:69599028-69599047 | None:intergenic | 35.0% | |
| ! | CATGCTGAGTTTTCAAAAGT+TGG | + | chr1.1:69598167-69598186 | None:intergenic | 35.0% |
| ! | CATTGATGACCATTTCTTGT+TGG | - | chr1.1:69597927-69597946 | MS.gene88831:CDS | 35.0% |
| !! | AAACTTACTGAAGCATTGCT+TGG | + | chr1.1:69599682-69599701 | None:intergenic | 35.0% |
| !! | AAAGTTTTATCCCGGTAAGT+GGG | + | chr1.1:69596772-69596791 | None:intergenic | 35.0% |
| !! | CAACAACCAAAGTTTTATCC+CGG | + | chr1.1:69596780-69596799 | None:intergenic | 35.0% |
| !! | CAACTTTTGAAAACTCAGCA+TGG | - | chr1.1:69598165-69598184 | MS.gene88831:intron | 35.0% |
| !! | TCTTACACTGGTAGTGTTTT+TGG | - | chr1.1:69596573-69596592 | MS.gene88831:CDS | 35.0% |
| !!! | CCTTTTGTTTTGATGGTTAG+AGG | - | chr1.1:69597338-69597357 | MS.gene88831:intron | 35.0% |
| !!! | GGTTTTTTAATTTCAGTGGC+AGG | - | chr1.1:69598038-69598057 | MS.gene88831:CDS | 35.0% |
| !!! | TTTGTTTTGATGGTTAGAGG+GGG | - | chr1.1:69597341-69597360 | MS.gene88831:intron | 35.0% |
| AAACTCAGCATGGTCTATCA+TGG | - | chr1.1:69598175-69598194 | MS.gene88831:intron | 40.0% | |
| AAATGGAACACGAGTGTACT+AGG | + | chr1.1:69598924-69598943 | None:intergenic | 40.0% | |
| AACAACATTCTGGACAAGCT+TGG | - | chr1.1:69597836-69597855 | MS.gene88831:CDS | 40.0% | |
| AGTTCTGTACATGCATCAAG+AGG | + | chr1.1:69597281-69597300 | None:intergenic | 40.0% | |
| ATTGGTCATTACTTGCAACC+AGG | + | chr1.1:69597451-69597470 | None:intergenic | 40.0% | |
| CACTTACCGGGATAAAACTT+TGG | - | chr1.1:69596771-69596790 | MS.gene88831:CDS | 40.0% | |
| CCTCATTTCATCAGGGATAA+AGG | + | chr1.1:69599034-69599053 | None:intergenic | 40.0% | |
| CCTTTATCCCTGATGAAATG+AGG | - | chr1.1:69599031-69599050 | MS.gene88831:intron | 40.0% | |
| CGAACATGAGAAGAAGTTTG+AGG | + | chr1.1:69598287-69598306 | None:intergenic | 40.0% | |
| CTTACAATCAGCCTTCTCTA+AGG | - | chr1.1:69599494-69599513 | MS.gene88831:intron | 40.0% | |
| CTTAGAGAAGGCTGATTGTA+AGG | + | chr1.1:69599496-69599515 | None:intergenic | 40.0% | |
| GCAATAATCTTCAAGGCAGA+TGG | + | chr1.1:69598405-69598424 | None:intergenic | 40.0% | |
| GTCTATGACAATGAAGATGG+TGG | - | chr1.1:69597422-69597441 | MS.gene88831:intron | 40.0% | |
| GTGTGAAGCTAGAGATCTTT+GGG | + | chr1.1:69599581-69599600 | None:intergenic | 40.0% | |
| TAAAACCAAAGAGACATGGC+CGG | + | chr1.1:69598715-69598734 | None:intergenic | 40.0% | |
| TACTTACCGGGATAAGACTT+TGG | - | chr1.1:69596850-69596869 | MS.gene88831:CDS | 40.0% | |
| TAGAGAAGGCTGATTGTAAG+GGG | + | chr1.1:69599494-69599513 | None:intergenic | 40.0% | |
| TGGATTCTTGGCTTACTTCA+TGG | - | chr1.1:69599260-69599279 | MS.gene88831:intron | 40.0% | |
| TGTGTGAAGCTAGAGATCTT+TGG | + | chr1.1:69599582-69599601 | None:intergenic | 40.0% | |
| TGTTTCCTTTGTGATGGTTG+TGG | - | chr1.1:69596940-69596959 | MS.gene88831:intron | 40.0% | |
| TTACGAGAAACAGATTGCGA+CGG | + | chr1.1:69599454-69599473 | None:intergenic | 40.0% | |
| ! | AAAGTCTTATCCCGGTAAGT+AGG | + | chr1.1:69596851-69596870 | None:intergenic | 40.0% |
| ! | AAGTCTTATCCCGGTAAGTA+GGG | + | chr1.1:69596850-69596869 | None:intergenic | 40.0% |
| ! | ACCAAAAACAGGTTTGCTTG+AGG | - | chr1.1:69598897-69598916 | MS.gene88831:CDS | 40.0% |
| ! | CAACAACCAAAGTCTTATCC+CGG | + | chr1.1:69596859-69596878 | None:intergenic | 40.0% |
| ! | CGATTTTACTATACGCTTCC+TGG | - | chr1.1:69599084-69599103 | MS.gene88831:intron | 40.0% |
| ! | TCCTCAAGCAAACCTGTTTT+TGG | + | chr1.1:69598901-69598920 | None:intergenic | 40.0% |
| ! | TTGAGGCTGACTCACTATAT+CGG | + | chr1.1:69599738-69599757 | None:intergenic | 40.0% |
| !! | AAGTTTTATCCCGGTAAGTG+GGG | + | chr1.1:69596771-69596790 | None:intergenic | 40.0% |
| !! | AGAATACGGAGCCTTATTCT+TGG | - | chr1.1:69597250-69597269 | MS.gene88831:intron | 40.0% |
| !! | CAAAGTTTTATCCCGGTAAG+TGG | + | chr1.1:69596773-69596792 | None:intergenic | 40.0% |
| !! | CTGCTAAGGTTGTGTTGATT+GGG | - | chr1.1:69596406-69596425 | MS.gene88831:CDS | 40.0% |
| !! | GTAGCTTTGAGGAAAAGGTT+AGG | - | chr1.1:69597366-69597385 | MS.gene88831:intron | 40.0% |
| !! | GTCAAAGGTTCTGGAGAATA+CGG | - | chr1.1:69597236-69597255 | MS.gene88831:intron | 40.0% |
| !! | TGCTTTGTTTGGGGAAAAGA+TGG | - | chr1.1:69597079-69597098 | MS.gene88831:intron | 40.0% |
| !!! | GCTTTTGATTTCAGCTCCAT+CGG | - | chr1.1:69597214-69597233 | MS.gene88831:intron | 40.0% |
| !!! | TTGTTTTGATGGTTAGAGGG+GGG | - | chr1.1:69597342-69597361 | MS.gene88831:intron | 40.0% |
| AACTCTGTCAATAAGTCGCC+AGG | + | chr1.1:69599226-69599245 | None:intergenic | 45.0% | |
| AAGAGGCTCTGCCAAGAATA+AGG | + | chr1.1:69597264-69597283 | None:intergenic | 45.0% | |
| AGGAAGGCCTCATTTCATCA+GGG | + | chr1.1:69599041-69599060 | None:intergenic | 45.0% | |
| AGTAAGCCAAGAATCCACAC+AGG | + | chr1.1:69599257-69599276 | None:intergenic | 45.0% | |
| ATGAATTCACCGCGTTCCAT+CGG | - | chr1.1:69599601-69599620 | MS.gene88831:intron | 45.0% | |
| ATTTCAGCTCCATCGGTCAA+AGG | - | chr1.1:69597221-69597240 | MS.gene88831:intron | 45.0% | |
| CACTGCAGACATAGCTAACA+GGG | + | chr1.1:69598216-69598235 | None:intergenic | 45.0% | |
| CCTCATAGAAGACACGAAAG+AGG | + | chr1.1:69599392-69599411 | None:intergenic | 45.0% | |
| CCTCTTTCGTGTCTTCTATG+AGG | - | chr1.1:69599389-69599408 | MS.gene88831:intron | 45.0% | |
| CTCCAGCGCAATAATCTTCA+AGG | + | chr1.1:69598412-69598431 | None:intergenic | 45.0% | |
| CTTGGACTTGGAATGTGTGA+AGG | + | chr1.1:69599664-69599683 | None:intergenic | 45.0% | |
| CTTTGTCATGAGGCAGGTTA+TGG | - | chr1.1:69598672-69598691 | MS.gene88831:intron | 45.0% | |
| GAAGACTTACTGTGACAGCA+GGG | + | chr1.1:69598452-69598471 | None:intergenic | 45.0% | |
| GAATGTCTTTGTCATGAGGC+AGG | - | chr1.1:69598666-69598685 | MS.gene88831:intron | 45.0% | |
| GAGTTGTCTGGTACACTAAC+TGG | - | chr1.1:69597562-69597581 | MS.gene88831:intron | 45.0% | |
| GTTAGGATTGCACAAAGTGC+TGG | - | chr1.1:69597383-69597402 | MS.gene88831:intron | 45.0% | |
| TAGGAAGGCCTCATTTCATC+AGG | + | chr1.1:69599042-69599061 | None:intergenic | 45.0% | |
| TCCTAAGATCCACAGAGCTA+CGG | + | chr1.1:69599552-69599571 | None:intergenic | 45.0% | |
| TCTGGTACACTAACTGGTTG+TGG | - | chr1.1:69597568-69597587 | MS.gene88831:intron | 45.0% | |
| TGCCTTGAAGATTATTGCGC+TGG | - | chr1.1:69598407-69598426 | MS.gene88831:intron | 45.0% | |
| TTCCTTTGTGATGGTTGTGG+TGG | - | chr1.1:69596943-69596962 | MS.gene88831:intron | 45.0% | |
| TTGCAAGCGTGATGCAAGAA+CGG | - | chr1.1:69599300-69599319 | MS.gene88831:intron | 45.0% | |
| TTGCATCACGCTTGCAAACT+GGG | + | chr1.1:69599297-69599316 | None:intergenic | 45.0% | |
| ! | GCTGCTAAGGTTGTGTTGAT+TGG | - | chr1.1:69596405-69596424 | MS.gene88831:CDS | 45.0% |
| !! | AAGGGGTACTTGCTAAAGAG+TGG | + | chr1.1:69599477-69599496 | None:intergenic | 45.0% |
| !! | ACTGAAGCATTGCTTGGACT+TGG | + | chr1.1:69599676-69599695 | None:intergenic | 45.0% |
| !! | CAGGGTTCTAGCTTAGTATG+TGG | - | chr1.1:69597804-69597823 | MS.gene88831:CDS | 45.0% |
| !! | CAGGTTATGGCTATTTTCCC+AGG | - | chr1.1:69598685-69598704 | MS.gene88831:intron | 45.0% |
| !! | GGCTATTTTCCCAGGATTTC+CGG | - | chr1.1:69598693-69598712 | MS.gene88831:intron | 45.0% |
| !!! | TGGTAGTGTTTTTGGCACAC+TGG | - | chr1.1:69596581-69596600 | MS.gene88831:CDS | 45.0% |
| !! | AATTATTTAAAAAAAATTCA+TGG | + | chr1.1:69598753-69598772 | None:intergenic | 5.0% |
| AAAGAGGATGCCGCAGATGA+CGG | + | chr1.1:69599376-69599395 | None:intergenic | 50.0% | |
| ACGCTTGCAAACTGGGCAAA+AGG | + | chr1.1:69599290-69599309 | None:intergenic | 50.0% | |
| AGAGCTACGGCTGAAGCTTA+GGG | + | chr1.1:69599539-69599558 | None:intergenic | 50.0% | |
| AGAGTTTCATGCTGCCTGTG+TGG | - | chr1.1:69599240-69599259 | MS.gene88831:intron | 50.0% | |
| ATGCTGCCTGTGTGGATTCT+TGG | - | chr1.1:69599248-69599267 | MS.gene88831:intron | 50.0% | |
| ATGTAGCCGACCCTACTTAC+CGG | - | chr1.1:69596837-69596856 | MS.gene88831:CDS | 50.0% | |
| ATTGCGCTGGAGAGAAACTC+AGG | - | chr1.1:69598420-69598439 | MS.gene88831:intron | 50.0% | |
| CACCACCACAACCATCACAA+AGG | + | chr1.1:69596948-69596967 | None:intergenic | 50.0% | |
| CAGTTGAGGCATGCAAAGCA+TGG | - | chr1.1:69596686-69596705 | MS.gene88831:CDS | 50.0% | |
| CGCAAATGGTGAGAAGCTTG+AGG | + | chr1.1:69599755-69599774 | None:intergenic | 50.0% | |
| CTTATCCCGGTAAGTAGGGT+CGG | + | chr1.1:69596846-69596865 | None:intergenic | 50.0% | |
| CTTGCATCACGCTTGCAAAC+TGG | + | chr1.1:69599298-69599317 | None:intergenic | 50.0% | |
| GATGGATAACCGATGGAACG+CGG | + | chr1.1:69599613-69599632 | None:intergenic | 50.0% | |
| GATTTCCGGCCATGTCTCTT+TGG | - | chr1.1:69598707-69598726 | MS.gene88831:intron | 50.0% | |
| GCACTGCAGACATAGCTAAC+AGG | + | chr1.1:69598217-69598236 | None:intergenic | 50.0% | |
| GGAAGACTTACTGTGACAGC+AGG | + | chr1.1:69598453-69598472 | None:intergenic | 50.0% | |
| GGCATCGCATACGAAGAGAA+AGG | - | chr1.1:69598261-69598280 | MS.gene88831:intron | 50.0% | |
| GTTAGCTATGTCTGCAGTGC+TGG | - | chr1.1:69598217-69598236 | MS.gene88831:intron | 50.0% | |
| TCAACATTCCGGAAGGGAGT+TGG | + | chr1.1:69599782-69599801 | None:intergenic | 50.0% | |
| TCAGTGGCAGGAAATTCTGC+TGG | - | chr1.1:69598050-69598069 | MS.gene88831:CDS | 50.0% | |
| TCTCCAGAACCTTTGACCGA+TGG | + | chr1.1:69597233-69597252 | None:intergenic | 50.0% | |
| TGACGGTAGGACCTTAGAGA+AGG | + | chr1.1:69599508-69599527 | None:intergenic | 50.0% | |
| TGCAAGCGTGATGCAAGAAC+GGG | - | chr1.1:69599301-69599320 | MS.gene88831:intron | 50.0% | |
| TTTATCCCGGTAAGTGGGGT+CGG | + | chr1.1:69596767-69596786 | None:intergenic | 50.0% | |
| ! | AGAGGTGTGGATTCTGAAGG+TGG | + | chr1.1:69599340-69599359 | None:intergenic | 50.0% |
| ! | AGCAGAGGTGTGGATTCTGA+AGG | + | chr1.1:69599343-69599362 | None:intergenic | 50.0% |
| ! | CAATGAAGATGGTGGCATCC+TGG | - | chr1.1:69597430-69597449 | MS.gene88831:intron | 50.0% |
| ! | GCTGACTCACTATATCGGAG+TGG | + | chr1.1:69599733-69599752 | None:intergenic | 50.0% |
| !! | GGGGTGTAGCTTTGAGGAAA+AGG | - | chr1.1:69597361-69597380 | MS.gene88831:intron | 50.0% |
| AAGAGGATGCCGCAGATGAC+GGG | + | chr1.1:69599375-69599394 | None:intergenic | 55.0% | |
| AGAGACATGGCCGGAAATCC+TGG | + | chr1.1:69598706-69598725 | None:intergenic | 55.0% | |
| AGCTTAGGGAGGGGGATTGA+CGG | + | chr1.1:69599525-69599544 | None:intergenic | 55.0% | |
| AGGGAGTTGGCAGACGCAAA+TGG | + | chr1.1:69599769-69599788 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAC+CGG | - | chr1.1:69596758-69596777 | MS.gene88831:CDS | 55.0% | |
| CAGAGCTACGGCTGAAGCTT+AGG | + | chr1.1:69599540-69599559 | None:intergenic | 55.0% | |
| CCTGCGGACGAAGAAACAAG+TGG | + | chr1.1:69598243-69598262 | None:intergenic | 55.0% | |
| CTACGGCTGAAGCTTAGGGA+GGG | + | chr1.1:69599535-69599554 | None:intergenic | 55.0% | |
| CTCTTCGTATGCGATGCCTG+CGG | + | chr1.1:69598259-69598278 | None:intergenic | 55.0% | |
| GAGACATGGCCGGAAATCCT+GGG | + | chr1.1:69598705-69598724 | None:intergenic | 55.0% | |
| GAGTGGATGCTGCTGATGAC+TGG | + | chr1.1:69599716-69599735 | None:intergenic | 55.0% | |
| GCTCCATCGGTCAAAGGTTC+TGG | - | chr1.1:69597227-69597246 | MS.gene88831:intron | 55.0% | |
| GCTGATGACTGGATGAACCG+AGG | + | chr1.1:69599705-69599724 | None:intergenic | 55.0% | |
| GGTAAGTAGGGTCGGCTACA+TGG | + | chr1.1:69596838-69596857 | None:intergenic | 55.0% | |
| GTCATCAACCCCGTCATCTG+CGG | - | chr1.1:69599363-69599382 | MS.gene88831:intron | 55.0% | |
| TACGGCTGAAGCTTAGGGAG+GGG | + | chr1.1:69599534-69599553 | None:intergenic | 55.0% | |
| TGTAGCCGACCCTACTTACC+GGG | - | chr1.1:69596838-69596857 | MS.gene88831:CDS | 55.0% | |
| ! | AAGCTTCAGCCGTAGCTCTG+TGG | - | chr1.1:69599540-69599559 | MS.gene88831:intron | 55.0% |
| ! | CCACTTGTTTCTTCGTCCGC+AGG | - | chr1.1:69598240-69598259 | MS.gene88831:intron | 55.0% |
| ! | GCCGTAGCTCTGTGGATCTT+AGG | - | chr1.1:69599548-69599567 | MS.gene88831:intron | 55.0% |
| ! | GGTGTGGATTCTGAAGGTGG+TGG | + | chr1.1:69599337-69599356 | None:intergenic | 55.0% |
| ! | TAGAGGGGGGTGTAGCTTTG+AGG | - | chr1.1:69597355-69597374 | MS.gene88831:intron | 55.0% |
| !! | GGTTGATGACAGCAGAGGTG+TGG | + | chr1.1:69599353-69599372 | None:intergenic | 55.0% |
| ACGGCTGAAGCTTAGGGAGG+GGG | + | chr1.1:69599533-69599552 | None:intergenic | 60.0% | |
| AGAGGATGCCGCAGATGACG+GGG | + | chr1.1:69599374-69599393 | None:intergenic | 60.0% | |
| GCGTGATGCAAGAACGGGTC+TGG | - | chr1.1:69599306-69599325 | MS.gene88831:intron | 60.0% | |
| GCTACGGCTGAAGCTTAGGG+AGG | + | chr1.1:69599536-69599555 | None:intergenic | 60.0% | |
| GGTAAGTGGGGTCGGCTACA+TGG | + | chr1.1:69596759-69596778 | None:intergenic | 60.0% | |
| TAGGGAGGGGGATTGACGGT+AGG | + | chr1.1:69599521-69599540 | None:intergenic | 60.0% | |
| TGCGTCTGCCAACTCCCTTC+CGG | - | chr1.1:69599771-69599790 | MS.gene88831:CDS | 60.0% | |
| TGTAGCCGACCCCACTTACC+GGG | - | chr1.1:69596759-69596778 | MS.gene88831:CDS | 60.0% | |
| !! | GACGGGGTTGATGACAGCAG+AGG | + | chr1.1:69599358-69599377 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 69596399 | 69599801 | 69596399 | ID=MS.gene88831 |
| chr1.1 | mRNA | 69596399 | 69599801 | 69596399 | ID=MS.gene88831.t1;Parent=MS.gene88831 |
| chr1.1 | exon | 69599729 | 69599801 | 69599729 | ID=MS.gene88831.t1.exon1;Parent=MS.gene88831.t1 |
| chr1.1 | CDS | 69599729 | 69599801 | 69599729 | ID=cds.MS.gene88831.t1;Parent=MS.gene88831.t1 |
| chr1.1 | exon | 69598742 | 69598972 | 69598742 | ID=MS.gene88831.t1.exon2;Parent=MS.gene88831.t1 |
| chr1.1 | CDS | 69598742 | 69598972 | 69598742 | ID=cds.MS.gene88831.t1;Parent=MS.gene88831.t1 |
| chr1.1 | exon | 69597739 | 69598146 | 69597739 | ID=MS.gene88831.t1.exon3;Parent=MS.gene88831.t1 |
| chr1.1 | CDS | 69597739 | 69598146 | 69597739 | ID=cds.MS.gene88831.t1;Parent=MS.gene88831.t1 |
| chr1.1 | exon | 69596399 | 69596958 | 69596399 | ID=MS.gene88831.t1.exon4;Parent=MS.gene88831.t1 |
| chr1.1 | CDS | 69596399 | 69596958 | 69596399 | ID=cds.MS.gene88831.t1;Parent=MS.gene88831.t1 |
| Gene Sequence |
| Protein sequence |
