Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90730.t1 | XP_003589343.2 | 97 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 3.70E-198 | 700.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90730.t1 | Q851Q6 | 66.9 | 366 | 115 | 2 | 1 | 360 | 137 | 502 | 1.5e-136 | 487.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90730.t1 | G7I5V4 | 97.0 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 2.7e-198 | 700.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene90730 | 0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene90730 | 0.813445 | 2.55E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene90730 | 0.829934 | 3.90E-55 | -1.69E-46 |
| MS.gene050301 | MS.gene90730 | 0.849001 | 4.28E-60 | -1.69E-46 |
| MS.gene050404 | MS.gene90730 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene050406 | MS.gene90730 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene050464 | MS.gene90730 | 0.800582 | 1.35E-48 | -1.69E-46 |
| MS.gene050529 | MS.gene90730 | 0.824686 | 7.06E-54 | -1.69E-46 |
| MS.gene050642 | MS.gene90730 | 0.831973 | 1.23E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene90730 | 0.838734 | 2.41E-57 | -1.69E-46 |
| MS.gene05101 | MS.gene90730 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene051171 | MS.gene90730 | 0.820823 | 5.60E-53 | -1.69E-46 |
| MS.gene051240 | MS.gene90730 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene051242 | MS.gene90730 | 0.84591 | 3.02E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene90730 | 0.836101 | 1.14E-56 | -1.69E-46 |
| MS.gene051582 | MS.gene90730 | 0.823361 | 1.44E-53 | -1.69E-46 |
| MS.gene051662 | MS.gene90730 | 0.807281 | 5.46E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene90730 | 0.841922 | 3.54E-58 | -1.69E-46 |
| MS.gene052178 | MS.gene90730 | 0.809086 | 2.25E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene90730 | 0.822854 | 1.90E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene90730 | 0.805588 | 1.24E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene90730 | 0.831819 | 1.34E-55 | -1.69E-46 |
| MS.gene052600 | MS.gene90730 | 0.838899 | 2.19E-57 | -1.69E-46 |
| MS.gene053330 | MS.gene90730 | 0.834319 | 3.21E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene90730 | 0.826815 | 2.21E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene90730 | 0.836332 | 9.96E-57 | -1.69E-46 |
| MS.gene053907 | MS.gene90730 | 0.851011 | 1.17E-60 | -1.69E-46 |
| MS.gene053928 | MS.gene90730 | 0.804486 | 2.11E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene90730 | 0.813165 | 2.94E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene90730 | 0.814415 | 1.56E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene90730 | 0.812831 | 3.48E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene90730 | 0.803298 | 3.73E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene90730 | 0.835569 | 1.55E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene90730 | 0.839218 | 1.81E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene90730 | 0.847371 | 1.21E-59 | -1.69E-46 |
| MS.gene055971 | MS.gene90730 | 0.815853 | 7.47E-52 | -1.69E-46 |
| MS.gene056451 | MS.gene90730 | 0.812122 | 4.97E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene90730 | 0.842957 | 1.88E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene90730 | 0.808696 | 2.73E-50 | -1.69E-46 |
| MS.gene056664 | MS.gene90730 | 0.819188 | 1.32E-52 | -1.69E-46 |
| MS.gene056796 | MS.gene90730 | 0.819433 | 1.16E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene90730 | 0.8468 | 1.73E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene90730 | 0.825361 | 4.89E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene90730 | 0.865318 | 6.44E-65 | -1.69E-46 |
| MS.gene057439 | MS.gene90730 | 0.805082 | 1.58E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene90730 | 0.843836 | 1.10E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene90730 | 0.839318 | 1.70E-57 | -1.69E-46 |
| MS.gene058142 | MS.gene90730 | 0.886652 | 2.84E-72 | -1.69E-46 |
| MS.gene058233 | MS.gene90730 | 0.837196 | 5.99E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene90730 | 0.906345 | 1.64E-80 | -1.69E-46 |
| MS.gene058743 | MS.gene90730 | 0.82105 | 4.96E-53 | -1.69E-46 |
| MS.gene058746 | MS.gene90730 | 0.807707 | 4.43E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene90730 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene90730 | 0.802665 | 5.04E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene90730 | 0.822311 | 2.54E-53 | -1.69E-46 |
| MS.gene059247 | MS.gene90730 | 0.811402 | 7.13E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene90730 | 0.801948 | 7.08E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene90730 | 0.834655 | 2.64E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene90730 | 0.860003 | 2.79E-63 | -1.69E-46 |
| MS.gene060083 | MS.gene90730 | 0.828624 | 8.11E-55 | -1.69E-46 |
| MS.gene060407 | MS.gene90730 | 0.863025 | 3.34E-64 | -1.69E-46 |
| MS.gene06090 | MS.gene90730 | 0.807903 | 4.03E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene90730 | 0.82829 | 9.76E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene90730 | 0.838654 | 2.53E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90730.t1 | MTR_1g023160 | 97.003 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 0.0 | 718 |
| MS.gene90730.t1 | MTR_2g019790 | 36.491 | 285 | 154 | 5 | 7 | 290 | 203 | 461 | 1.10e-52 | 184 |
| MS.gene90730.t1 | MTR_1g073010 | 40.376 | 213 | 105 | 5 | 73 | 271 | 250 | 454 | 7.56e-39 | 145 |
| MS.gene90730.t1 | MTR_2g030370 | 31.387 | 137 | 75 | 3 | 143 | 260 | 27 | 163 | 9.91e-16 | 78.2 |
| MS.gene90730.t1 | MTR_2g030335 | 34.653 | 101 | 57 | 2 | 143 | 234 | 27 | 127 | 2.94e-12 | 65.9 |
| MS.gene90730.t1 | MTR_3g094880 | 37.069 | 116 | 59 | 3 | 141 | 254 | 65 | 168 | 1.33e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90730.t1 | AT5G18570 | 50.296 | 169 | 76 | 2 | 120 | 288 | 358 | 518 | 8.63e-48 | 172 |
| MS.gene90730.t1 | AT1G07615 | 38.793 | 232 | 116 | 4 | 73 | 286 | 225 | 448 | 5.82e-38 | 142 |
| MS.gene90730.t1 | AT1G30580 | 33.088 | 136 | 72 | 3 | 143 | 259 | 27 | 162 | 6.84e-16 | 79.0 |
| MS.gene90730.t1 | AT1G56050 | 36.111 | 108 | 59 | 3 | 144 | 241 | 57 | 164 | 1.19e-12 | 69.3 |
| MS.gene90730.t1 | AT4G39520 | 36.842 | 114 | 58 | 3 | 143 | 254 | 68 | 169 | 2.75e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCATTAATGTTGTAAA+TGG | 0.168245 | 1.4:+1524155 | None:intergenic |
| CCACGACCTCACTCTGTTAT+TGG | 0.196696 | 1.4:-1522537 | MS.gene90730:CDS |
| GTTCGTATTTCTGTTCCTTT+AGG | 0.246041 | 1.4:-1527214 | MS.gene90730:intron |
| ACAGTTCTGTAGTCATTTAC+AGG | 0.252618 | 1.4:+1523854 | None:intergenic |
| AGGAGATAAGGGCCGCTTTA+AGG | 0.264646 | 1.4:-1522313 | MS.gene90730:CDS |
| TAGAAATGCCACGGCATAAT+AGG | 0.302506 | 1.4:-1525332 | MS.gene90730:CDS |
| AAATGGATAATCAGCAATAT+CGG | 0.307095 | 1.4:+1524172 | None:intergenic |
| ACTCAAGAAATTATGAGAAT+TGG | 0.328796 | 1.4:-1522660 | MS.gene90730:CDS |
| CCATCAAGGCGTCCAAGATT+TGG | 0.342473 | 1.4:+1524137 | None:intergenic |
| GAAACTTCAGAGCTTGGTTT+TGG | 0.342930 | 1.4:+1522615 | None:intergenic |
| AGCGTTGATTTCCCAGCATT+TGG | 0.349531 | 1.4:+1524221 | None:intergenic |
| ACAACATTAATGCCAAATCT+TGG | 0.357348 | 1.4:-1524149 | MS.gene90730:CDS |
| TGCTGGGAAATCAACGCTTC+TGG | 0.366085 | 1.4:-1524216 | MS.gene90730:CDS |
| TGAAGGAAAAGATACGTTAT+TGG | 0.376575 | 1.4:-1527338 | MS.gene90730:CDS |
| AAAACCAAGCTCTGAAGTTT+CGG | 0.377456 | 1.4:-1522613 | MS.gene90730:CDS |
| CATGGTTAGCGAGATGTTAA+AGG | 0.379680 | 1.4:-1522333 | MS.gene90730:CDS |
| CCAAATCTTGGACGCCTTGA+TGG | 0.397530 | 1.4:-1524137 | MS.gene90730:CDS |
| GATTTGCCTGGTCTTATAGA+AGG | 0.401210 | 1.4:-1524065 | MS.gene90730:CDS |
| TGGAGTTTCATAGTAAGAAT+AGG | 0.401600 | 1.4:-1527318 | MS.gene90730:CDS |
| CACAGTTGTGAAAAGCAAAC+GGG | 0.420716 | 1.4:-1525769 | MS.gene90730:CDS |
| TACATCCCTGCTCCCAAGTT+GGG | 0.426129 | 1.4:+1524110 | None:intergenic |
| ACTAGAAACCAACGGTTCCT+TGG | 0.430294 | 1.4:+1522277 | None:intergenic |
| TATGGTCGTTCAAGGTAATC+AGG | 0.432822 | 1.4:+1523035 | None:intergenic |
| TTGTAGGGACTTCCAAATGC+TGG | 0.444567 | 1.4:-1524233 | MS.gene90730:intron |
| GGTGATCCCAACTTGGGAGC+AGG | 0.459574 | 1.4:-1524116 | MS.gene90730:CDS |
| CGAGATGTTAAAGGAGATAA+GGG | 0.460007 | 1.4:-1522324 | MS.gene90730:CDS |
| TCTTATAGAAGGTGCTCACT+TGG | 0.464858 | 1.4:-1524054 | MS.gene90730:CDS |
| CCTTGATGGTGATCCCAACT+TGG | 0.465028 | 1.4:-1524123 | MS.gene90730:CDS |
| CAACAATGTATGGTCGTTCA+AGG | 0.466565 | 1.4:+1523027 | None:intergenic |
| TGAGCCGAAACTTCAGAGCT+TGG | 0.472376 | 1.4:+1522609 | None:intergenic |
| GCTACATTGGCAGATTTGCC+TGG | 0.472873 | 1.4:-1524077 | MS.gene90730:CDS |
| TCTAAGAAGGACCCGGCTAC+TGG | 0.473999 | 1.4:-1523906 | MS.gene90730:CDS |
| ATCGGGTTTCGCAAGCGTAA+TGG | 0.482247 | 1.4:+1524190 | None:intergenic |
| GCACAGTTGTGAAAAGCAAA+CGG | 0.484997 | 1.4:-1525770 | MS.gene90730:CDS |
| GATGAGAGATGACTCGGATA+AGG | 0.486698 | 1.4:-1525280 | MS.gene90730:intron |
| AACAACATGGACCAGTAGCC+GGG | 0.486773 | 1.4:+1523895 | None:intergenic |
| TTATTCAAAACAACAATGTA+TGG | 0.487346 | 1.4:+1523017 | None:intergenic |
| GCGAGATGTTAAAGGAGATA+AGG | 0.492991 | 1.4:-1522325 | MS.gene90730:CDS |
| ATAATTTCTTGAGTCAATGT+TGG | 0.494238 | 1.4:+1522669 | None:intergenic |
| CGCAACAAGAACTTCATCAC+CGG | 0.498936 | 1.4:+1525719 | None:intergenic |
| ACCTGGGGAGGAAGTTAAGT+TGG | 0.499431 | 1.4:-1524691 | MS.gene90730:CDS |
| TTTACTTCTTACTTGAGGAA+TGG | 0.500469 | 1.4:-1527253 | MS.gene90730:CDS |
| AAGGCAGTGCGTTGATTCCA+AGG | 0.513530 | 1.4:-1522294 | MS.gene90730:CDS |
| CGTTGATTCCAAGGAACCGT+TGG | 0.514117 | 1.4:-1522285 | MS.gene90730:CDS |
| GTGATTATTTATGCTGATGA+AGG | 0.516366 | 1.4:-1527355 | MS.gene90730:CDS |
| GTTGCGAGGGGTGGACAAGG+AGG | 0.518059 | 1.4:-1525702 | MS.gene90730:CDS |
| TTGCGAGGGGTGGACAAGGA+GGG | 0.520295 | 1.4:-1525701 | MS.gene90730:CDS |
| AATGGATAATCAGCAATATC+GGG | 0.521649 | 1.4:+1524173 | None:intergenic |
| ATACTTCCAATGGGTGGTCA+TGG | 0.522317 | 1.4:-1527385 | None:intergenic |
| GTGATGAAGTTCTTGTTGCG+AGG | 0.528670 | 1.4:-1525716 | MS.gene90730:CDS |
| CAGTTCTGTAGTCATTTACA+GGG | 0.534642 | 1.4:+1523855 | None:intergenic |
| TTTGGTTCATGGTCAACCTG+GGG | 0.544159 | 1.4:-1524706 | MS.gene90730:CDS |
| ATACATCCCTGCTCCCAAGT+TGG | 0.545507 | 1.4:+1524109 | None:intergenic |
| TGTAGGGACTTCCAAATGCT+GGG | 0.545787 | 1.4:-1524232 | MS.gene90730:intron |
| TTATTGCAGAAAGCGTATCA+TGG | 0.546103 | 1.4:-1522351 | MS.gene90730:intron |
| CAACAACATGGACCAGTAGC+CGG | 0.547834 | 1.4:+1523894 | None:intergenic |
| TGCGAGGGGTGGACAAGGAG+GGG | 0.550722 | 1.4:-1525700 | MS.gene90730:intron |
| CCAATAACAGAGTGAGGTCG+TGG | 0.551059 | 1.4:+1522537 | None:intergenic |
| GTGATCCCAACTTGGGAGCA+GGG | 0.553268 | 1.4:-1524115 | MS.gene90730:CDS |
| TCCAACTTAACTTCCTCCCC+AGG | 0.554908 | 1.4:+1524690 | None:intergenic |
| CTTGTTGCGAGGGGTGGACA+AGG | 0.554974 | 1.4:-1525705 | MS.gene90730:CDS |
| TGATGAAGTTCTTGTTGCGA+GGG | 0.555435 | 1.4:-1525715 | MS.gene90730:CDS |
| CTTATAGAAGGTGCTCACTT+GGG | 0.556651 | 1.4:-1524053 | MS.gene90730:CDS |
| CAGTAGATGCGTCAACAACA+TGG | 0.566647 | 1.4:+1523882 | None:intergenic |
| TCACCACCATGACCACCCAT+TGG | 0.575301 | 1.4:+1527379 | None:intergenic |
| GGAACAGAAATACGAACAGT+AGG | 0.577522 | 1.4:+1527220 | None:intergenic |
| CTACGAGTTGTAGCCGACGT+TGG | 0.577677 | 1.4:-1524660 | MS.gene90730:CDS |
| GTATTCGTCTGAAGCTACAT+TGG | 0.579587 | 1.4:-1524090 | MS.gene90730:CDS |
| CCAAGTTGGGATCACCATCA+AGG | 0.581733 | 1.4:+1524123 | None:intergenic |
| ATTATGAGAATTGGCAGCGA+TGG | 0.582383 | 1.4:-1522651 | MS.gene90730:CDS |
| GGTTCATGGTCAACCTGGGG+AGG | 0.582643 | 1.4:-1524703 | MS.gene90730:CDS |
| GACTGAAGAAAGTGACCCAA+AGG | 0.583497 | 1.4:-1522580 | MS.gene90730:CDS |
| TGAGGCATCTAAGAAGGACC+CGG | 0.584490 | 1.4:-1523913 | MS.gene90730:CDS |
| GGTGGTAATGTTGATGCTGT+TGG | 0.588083 | 1.4:-1527280 | MS.gene90730:CDS |
| GAAGTTCTTGTTGCGAGGGG+TGG | 0.596690 | 1.4:-1525711 | MS.gene90730:CDS |
| CTTGATGGTGATCCCAACTT+GGG | 0.597546 | 1.4:-1524122 | MS.gene90730:CDS |
| GGAAACTACATACCTCTGGC+AGG | 0.603249 | 1.4:+1522988 | None:intergenic |
| AGAAGGTGCTCACTTGGGAA+AGG | 0.609931 | 1.4:-1524048 | MS.gene90730:intron |
| TCTTTGATACTTCCAATGGG+TGG | 0.614114 | 1.4:-1527391 | None:intergenic |
| TTAGCTGATTTAGCACGACC+CGG | 0.616899 | 1.4:-1525738 | MS.gene90730:CDS |
| TTAGCTTGTTAGAAATGCCA+CGG | 0.620564 | 1.4:-1525341 | MS.gene90730:CDS |
| CTTCCAATGGGTGGTCATGG+TGG | 0.633367 | 1.4:-1527382 | None:intergenic |
| TGAGCACCTTCTATAAGACC+AGG | 0.641306 | 1.4:+1524059 | None:intergenic |
| ATCAACGCACTGCCTTAAAG+CGG | 0.642286 | 1.4:+1522301 | None:intergenic |
| TAACGTGATGAGAGATGACT+CGG | 0.642615 | 1.4:-1525286 | MS.gene90730:CDS |
| GCAACAAGAACTTCATCACC+GGG | 0.643404 | 1.4:+1525720 | None:intergenic |
| GAATAAGATTGACCTGCCAG+AGG | 0.647898 | 1.4:-1523000 | MS.gene90730:intron |
| AGGTTTAATGCGAAACGTGG+TGG | 0.659737 | 1.4:-1527298 | MS.gene90730:CDS |
| CAACGTCGGCTACAACTCGT+AGG | 0.664807 | 1.4:+1524661 | None:intergenic |
| CTAACTCCAATAACAGAGTG+AGG | 0.666857 | 1.4:+1522531 | None:intergenic |
| AATAGGTTTAATGCGAAACG+TGG | 0.677121 | 1.4:-1527301 | MS.gene90730:CDS |
| ACTTACAATTAAACCAACGT+CGG | 0.682305 | 1.4:+1524647 | None:intergenic |
| TGTGGCACACTAGAAACCAA+CGG | 0.704503 | 1.4:+1522269 | None:intergenic |
| GATGAAGTTCTTGTTGCGAG+GGG | 0.705915 | 1.4:-1525714 | MS.gene90730:CDS |
| ACAGTTGTGAAAAGCAAACG+GGG | 0.706082 | 1.4:-1525768 | MS.gene90730:CDS |
| CCCAAAGGAAAAGAAACTTG+AGG | 0.715840 | 1.4:-1522565 | MS.gene90730:CDS |
| ATAGGATGCAAATCTCACTG+TGG | 0.804712 | 1.4:+1522251 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTAATCTTTCA+GGG | - | chr1.4:1525688-1525707 | MS.gene90730:intron | 10.0% |
| !! | AAACTTGATTAAAAATTCAA+CGG | + | chr1.4:1526282-1526301 | None:intergenic | 15.0% |
| !! | AATAATATCATATAAGATGT+TGG | + | chr1.4:1523004-1523023 | None:intergenic | 15.0% |
| !! | ATAAATAAATTCATACTCAT+TGG | - | chr1.4:1524124-1524143 | MS.gene90730:CDS | 15.0% |
| !! | ATTATGTTTGATTAATTGAT+TGG | - | chr1.4:1522766-1522785 | MS.gene90730:intron | 15.0% |
| !! | TTGCTTCTTAAAAAAAATAA+TGG | + | chr1.4:1525917-1525936 | None:intergenic | 15.0% |
| !!! | AAATCAAGTTTAGTTTTTTA+TGG | + | chr1.4:1523820-1523839 | None:intergenic | 15.0% |
| !!! | AATCAAGTTTAGTTTTTTAT+GGG | + | chr1.4:1523819-1523838 | None:intergenic | 15.0% |
| !!! | AATGTTGTTATGTTTTTATT+AGG | - | chr1.4:1522732-1522751 | MS.gene90730:intron | 15.0% |
| !!! | AATTTCATTTTTTGATGTTA+TGG | - | chr1.4:1522460-1522479 | MS.gene90730:intron | 15.0% |
| !!! | AATTTCCTATTATTTTGTTA+AGG | - | chr1.4:1526713-1526732 | MS.gene90730:intron | 15.0% |
| !!! | ATTTCCTATTATTTTGTTAA+GGG | - | chr1.4:1526714-1526733 | MS.gene90730:intron | 15.0% |
| !!! | ATTTTTTAACTTCATATCAA+TGG | + | chr1.4:1526209-1526228 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTTAATCTTTC+AGG | - | chr1.4:1525687-1525706 | MS.gene90730:intron | 15.0% |
| !!! | GTCTAAATCTTTTTTTAATA+TGG | - | chr1.4:1525259-1525278 | MS.gene90730:intron | 15.0% |
| !!! | TGTTCATTAATTTTAATTTC+AGG | - | chr1.4:1526935-1526954 | MS.gene90730:intron | 15.0% |
| !!! | TTATATTAGTTGACTTTTTT+TGG | + | chr1.4:1523278-1523297 | None:intergenic | 15.0% |
| !! | AATCTCAAAATTATCATCAT+TGG | + | chr1.4:1525131-1525150 | None:intergenic | 20.0% |
| !! | AGTTTATTATTGTGAATTAC+AGG | - | chr1.4:1523849-1523868 | MS.gene90730:CDS | 20.0% |
| !! | ATATTTAATAAGCAGCTATA+TGG | + | chr1.4:1525667-1525686 | None:intergenic | 20.0% |
| !! | ATGCAATCTATAAGATTATT+CGG | + | chr1.4:1526108-1526127 | None:intergenic | 20.0% |
| !! | CATATTACAAGATAGTAATA+CGG | + | chr1.4:1526890-1526909 | None:intergenic | 20.0% |
| !! | GTAAGATAAAATTTAACTGA+TGG | + | chr1.4:1523624-1523643 | None:intergenic | 20.0% |
| !! | TAAATTATCAGAGCTAATAA+AGG | + | chr1.4:1526344-1526363 | None:intergenic | 20.0% |
| !! | TTAATATGGTGAACTAAAAT+TGG | - | chr1.4:1525273-1525292 | MS.gene90730:intron | 20.0% |
| !! | TTATTCAAAACAACAATGTA+TGG | + | chr1.4:1526627-1526646 | None:intergenic | 20.0% |
| !! | TTTATTCGTAAGTACAAAAA+TGG | + | chr1.4:1523110-1523129 | None:intergenic | 20.0% |
| !!! | AAAAAATAATGGAGTCTATA+AGG | + | chr1.4:1525906-1525925 | None:intergenic | 20.0% |
| !!! | AAAAATAATGGAGTCTATAA+GGG | + | chr1.4:1525905-1525924 | None:intergenic | 20.0% |
| !!! | AAGATACATTTTAAAATGAC+AGG | + | chr1.4:1524787-1524806 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTGAGATTTCT+GGG | - | chr1.4:1525134-1525153 | MS.gene90730:intron | 20.0% |
| !!! | ATGTCTTTTCATATTTTAAC+TGG | - | chr1.4:1523422-1523441 | MS.gene90730:intron | 20.0% |
| !!! | ATTTCATATTCAGTTTTATC+AGG | - | chr1.4:1524641-1524660 | MS.gene90730:intron | 20.0% |
| !!! | CTGTAACAATTTTAAAATAC+AGG | + | chr1.4:1524913-1524932 | None:intergenic | 20.0% |
| !!! | CTGTATTTTAAAATTGTTAC+AGG | - | chr1.4:1524911-1524930 | MS.gene90730:intron | 20.0% |
| !!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1.4:1524763-1524782 | None:intergenic | 20.0% |
| !!! | TAAATTTTATCTTACCACTT+TGG | - | chr1.4:1523629-1523648 | MS.gene90730:intron | 20.0% |
| !!! | TTAATTTTAATTTCAGGTTG+AGG | - | chr1.4:1526941-1526960 | MS.gene90730:intron | 20.0% |
| !!! | TTTAAAATTGTTACAGGTTT+TGG | - | chr1.4:1524917-1524936 | MS.gene90730:intron | 20.0% |
| !!! | TTTAGATTCAAGTTTTTTCT+TGG | - | chr1.4:1525839-1525858 | MS.gene90730:intron | 20.0% |
| ! | AAAGTGAAATATCCCTTTAA+AGG | + | chr1.4:1526162-1526181 | None:intergenic | 25.0% |
| ! | AAATGGATAATCAGCAATAT+CGG | + | chr1.4:1525472-1525491 | None:intergenic | 25.0% |
| ! | AAATTTGCAAACAAACCTAA+AGG | + | chr1.4:1522445-1522464 | None:intergenic | 25.0% |
| ! | AACAAACAGAGAACTAAATA+AGG | + | chr1.4:1525039-1525058 | None:intergenic | 25.0% |
| ! | AATTTCACTTGGACAAAAAA+AGG | + | chr1.4:1525306-1525325 | None:intergenic | 25.0% |
| ! | ACAAAATTACTAACCATACA+TGG | + | chr1.4:1523655-1523674 | None:intergenic | 25.0% |
| ! | ACAACAATAATAACCAAGAT+AGG | + | chr1.4:1524241-1524260 | None:intergenic | 25.0% |
| ! | ACTCAAGAAATTATGAGAAT+TGG | - | chr1.4:1526981-1527000 | MS.gene90730:intron | 25.0% |
| ! | ATAATTTCTTGAGTCAATGT+TGG | + | chr1.4:1526975-1526994 | None:intergenic | 25.0% |
| ! | ATCTTCATAATAAATAACCG+TGG | - | chr1.4:1525069-1525088 | MS.gene90730:intron | 25.0% |
| ! | ATGTGGATAAGATTAGAATA+AGG | - | chr1.4:1523082-1523101 | MS.gene90730:intron | 25.0% |
| ! | ATTAAAAACTCCAAAACATG+AGG | + | chr1.4:1526534-1526553 | None:intergenic | 25.0% |
| ! | ATTGTGCATAAAGTAATTTG+TGG | - | chr1.4:1526488-1526507 | MS.gene90730:intron | 25.0% |
| ! | ATTTCACTTGGACAAAAAAA+GGG | + | chr1.4:1525305-1525324 | None:intergenic | 25.0% |
| ! | CACAATAATAAACTCAATGA+GGG | + | chr1.4:1523843-1523862 | None:intergenic | 25.0% |
| ! | CAGAAAATGAAATGAAAACA+AGG | + | chr1.4:1523745-1523764 | None:intergenic | 25.0% |
| ! | GAAATTTGGTTGATCAATTA+TGG | + | chr1.4:1524550-1524569 | None:intergenic | 25.0% |
| ! | GATATATAGACTGTCTAAAT+CGG | + | chr1.4:1522673-1522692 | None:intergenic | 25.0% |
| ! | GATTTACATTGTAATGTTAG+AGG | - | chr1.4:1522820-1522839 | MS.gene90730:intron | 25.0% |
| ! | TCACAATAATAAACTCAATG+AGG | + | chr1.4:1523844-1523863 | None:intergenic | 25.0% |
| ! | TGTTCAAAAACTATTGTTTC+TGG | + | chr1.4:1524688-1524707 | None:intergenic | 25.0% |
| ! | TTAAAAACTCCAAAACATGA+GGG | + | chr1.4:1526533-1526552 | None:intergenic | 25.0% |
| ! | TTACATTAAGATAGGAACAA+AGG | + | chr1.4:1524755-1524774 | None:intergenic | 25.0% |
| ! | TTATAAGTTCTTCCAATTAG+TGG | - | chr1.4:1522608-1522627 | MS.gene90730:CDS | 25.0% |
| ! | TTTGGCATTAATGTTGTAAA+TGG | + | chr1.4:1525489-1525508 | None:intergenic | 25.0% |
| !! | ATGAAGTTAATCTTGTTGTA+GGG | - | chr1.4:1525393-1525412 | MS.gene90730:intron | 25.0% |
| !! | TGACAAATTAGCAAGTATTT+TGG | + | chr1.4:1524576-1524595 | None:intergenic | 25.0% |
| !!! | AAGCTATTTTTGATAACTTG+TGG | - | chr1.4:1522537-1522556 | MS.gene90730:CDS | 25.0% |
| !!! | AAGTATTTTGGACAGAAATT+TGG | + | chr1.4:1524564-1524583 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTCTTGGTTTAAC+AGG | - | chr1.4:1525848-1525867 | MS.gene90730:intron | 25.0% |
| !!! | ACATAATAAGTACTGAAAAG+TGG | + | chr1.4:1523227-1523246 | None:intergenic | 25.0% |
| !!! | AGTTTTAAAAACATTGGTCA+TGG | - | chr1.4:1523461-1523480 | MS.gene90730:intron | 25.0% |
| !!! | ATAATAAGTACTGAAAAGTG+GGG | + | chr1.4:1523225-1523244 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAAACTGAAC+TGG | - | chr1.4:1523307-1523326 | MS.gene90730:intron | 25.0% |
| !!! | CATAATAAGTACTGAAAAGT+GGG | + | chr1.4:1523226-1523245 | None:intergenic | 25.0% |
| !!! | GATGATAATTTTGAGATTTC+TGG | - | chr1.4:1525133-1525152 | MS.gene90730:intron | 25.0% |
| !!! | TTTTTGATAACTTGTGGTTT+TGG | - | chr1.4:1522543-1522562 | MS.gene90730:CDS | 25.0% |
| AAAAGACATTGTTCACGATT+CGG | + | chr1.4:1523411-1523430 | None:intergenic | 30.0% | |
| AAGAACAAACAGGAAATTTG+TGG | + | chr1.4:1526390-1526409 | None:intergenic | 30.0% | |
| AATCCAAAAGCAAAAGAAAG+AGG | + | chr1.4:1526421-1526440 | None:intergenic | 30.0% | |
| AATGGATAATCAGCAATATC+GGG | + | chr1.4:1525471-1525490 | None:intergenic | 30.0% | |
| AATTTGTGGCTATCAATAGA+TGG | + | chr1.4:1526376-1526395 | None:intergenic | 30.0% | |
| ACAACATTAATGCCAAATCT+TGG | - | chr1.4:1525492-1525511 | MS.gene90730:intron | 30.0% | |
| ACTTACAATTAAACCAACGT+CGG | + | chr1.4:1524997-1525016 | None:intergenic | 30.0% | |
| AGTATAGCTTAGATGGTAAA+AGG | - | chr1.4:1523152-1523171 | MS.gene90730:intron | 30.0% | |
| ATATACTCAAACTCAGATTG+AGG | + | chr1.4:1526688-1526707 | None:intergenic | 30.0% | |
| ATCAACATTATCTTCTTTCC+TGG | - | chr1.4:1524193-1524212 | MS.gene90730:CDS | 30.0% | |
| ATTCTTCAACAATCAGAGAA+GGG | - | chr1.4:1526126-1526145 | MS.gene90730:intron | 30.0% | |
| ATTGAAGGATTGAATCAACA+AGG | - | chr1.4:1524474-1524493 | MS.gene90730:intron | 30.0% | |
| CACAATCTTCACTAAAATCA+TGG | + | chr1.4:1525180-1525199 | None:intergenic | 30.0% | |
| CAGCTATATGGTTTAAAAGA+TGG | + | chr1.4:1525655-1525674 | None:intergenic | 30.0% | |
| CATTGTAATGTTAGAGGATT+TGG | - | chr1.4:1522826-1522845 | MS.gene90730:intron | 30.0% | |
| GAAGCAATTTATTCACGAAA+TGG | + | chr1.4:1523686-1523705 | None:intergenic | 30.0% | |
| GGAAAGAATAAAGAACAAAC+AGG | + | chr1.4:1526400-1526419 | None:intergenic | 30.0% | |
| GTGATTATTTATGCTGATGA+AGG | - | chr1.4:1522286-1522305 | MS.gene90730:CDS | 30.0% | |
| TAAGTTGTACAGATTCACAT+TGG | - | chr1.4:1524068-1524087 | MS.gene90730:CDS | 30.0% | |
| TACAAGATAGTAATACGGAA+GGG | + | chr1.4:1526885-1526904 | None:intergenic | 30.0% | |
| TACCATCTAAGCTATACTTA+CGG | + | chr1.4:1523150-1523169 | None:intergenic | 30.0% | |
| TATACTCAAACTCAGATTGA+GGG | + | chr1.4:1526687-1526706 | None:intergenic | 30.0% | |
| TCTCTCAGTTCAATTAATGT+TGG | - | chr1.4:1524509-1524528 | MS.gene90730:intron | 30.0% | |
| TGAAGGAAAAGATACGTTAT+TGG | - | chr1.4:1522303-1522322 | MS.gene90730:CDS | 30.0% | |
| TGGAGTTTCATAGTAAGAAT+AGG | - | chr1.4:1522323-1522342 | MS.gene90730:CDS | 30.0% | |
| TGTGAAATGAAATGCTATGA+AGG | + | chr1.4:1527191-1527210 | None:intergenic | 30.0% | |
| TTACAAGATAGTAATACGGA+AGG | + | chr1.4:1526886-1526905 | None:intergenic | 30.0% | |
| TTTACTTCTTACTTGAGGAA+TGG | - | chr1.4:1522388-1522407 | MS.gene90730:intron | 30.0% | |
| TTTGAAAAGCAGTATAAGCA+TGG | + | chr1.4:1523346-1523365 | None:intergenic | 30.0% | |
| ! | GATGAAGTTAATCTTGTTGT+AGG | - | chr1.4:1525392-1525411 | MS.gene90730:intron | 30.0% |
| ! | TCATTCTAATTCTGTTTTGC+AGG | - | chr1.4:1526566-1526585 | MS.gene90730:intron | 30.0% |
| ! | TTATCATTTCCCTCATGTTT+TGG | - | chr1.4:1526521-1526540 | MS.gene90730:intron | 30.0% |
| ! | TTTCCTCTTTCTTTTGCTTT+TGG | - | chr1.4:1526415-1526434 | MS.gene90730:intron | 30.0% |
| ! | TTTTAGTCAAATGCTTGGAA+GGG | - | chr1.4:1526300-1526319 | MS.gene90730:intron | 30.0% |
| ! | TTTTTAATCTTTCAGGGTCT+TGG | - | chr1.4:1525694-1525713 | MS.gene90730:intron | 30.0% |
| !! | AAAGGGATATTTCACTTTTG+AGG | - | chr1.4:1526164-1526183 | MS.gene90730:intron | 30.0% |
| !! | GATTTTAGTGAAGATTGTGA+AGG | - | chr1.4:1525181-1525200 | MS.gene90730:intron | 30.0% |
| !! | GTGTTTTTACTTCTTACTTG+AGG | - | chr1.4:1522383-1522402 | MS.gene90730:intron | 30.0% |
| !! | TAATAAGTACTGAAAAGTGG+GGG | + | chr1.4:1523224-1523243 | None:intergenic | 30.0% |
| !! | TCAAGTGTGTCACTTAATAT+GGG | + | chr1.4:1522872-1522891 | None:intergenic | 30.0% |
| !! | TCCTATTATTTTGTTAAGGG+AGG | - | chr1.4:1526717-1526736 | MS.gene90730:intron | 30.0% |
| !! | TTTTTAGTCAAATGCTTGGA+AGG | - | chr1.4:1526299-1526318 | MS.gene90730:intron | 30.0% |
| !!! | ATTTTTTGAGGCATCTAAGA+AGG | - | chr1.4:1525722-1525741 | MS.gene90730:CDS | 30.0% |
| !!! | CAAGTTTTTAGTCAAATGCT+TGG | - | chr1.4:1526295-1526314 | MS.gene90730:intron | 30.0% |
| !!! | GACCAATGTTTTTAAAACTG+AGG | + | chr1.4:1523460-1523479 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGTTCATCATAGT+TGG | - | chr1.4:1522791-1522810 | MS.gene90730:intron | 30.0% |
| !!! | TGCCTCAGTTTTAAAAACAT+TGG | - | chr1.4:1523455-1523474 | MS.gene90730:intron | 30.0% |
| AACAGGTTTACTTGAAGTTG+TGG | - | chr1.4:1525865-1525884 | MS.gene90730:intron | 35.0% | |
| AACCACAACTAATACTTTCC+AGG | + | chr1.4:1524214-1524233 | None:intergenic | 35.0% | |
| AATAGGTTTAATGCGAAACG+TGG | - | chr1.4:1522340-1522359 | MS.gene90730:CDS | 35.0% | |
| ACAGGTTTACTTGAAGTTGT+GGG | - | chr1.4:1525866-1525885 | MS.gene90730:intron | 35.0% | |
| ACAGTTCTGTAGTCATTTAC+AGG | + | chr1.4:1525790-1525809 | None:intergenic | 35.0% | |
| ACATGAGGGAAATGATAAGT+TGG | + | chr1.4:1526519-1526538 | None:intergenic | 35.0% | |
| ACCATCTAAGCTATACTTAC+GGG | + | chr1.4:1523149-1523168 | None:intergenic | 35.0% | |
| ACTTCATATCAATGGTTGAG+AGG | + | chr1.4:1526201-1526220 | None:intergenic | 35.0% | |
| ATACATTTAGCCCCTGAAAT+GGG | - | chr1.4:1526784-1526803 | MS.gene90730:intron | 35.0% | |
| ATCATAGTTCCAGAGAGATT+TGG | + | chr1.4:1524609-1524628 | None:intergenic | 35.0% | |
| ATTAATTGAACTGAGAGAGC+AGG | + | chr1.4:1524507-1524526 | None:intergenic | 35.0% | |
| CAGTTCTGTAGTCATTTACA+GGG | + | chr1.4:1525789-1525808 | None:intergenic | 35.0% | |
| CATTCTTCAACAATCAGAGA+AGG | - | chr1.4:1526125-1526144 | MS.gene90730:intron | 35.0% | |
| CATTGTACTCCATTCTATGT+TGG | - | chr1.4:1523057-1523076 | MS.gene90730:intron | 35.0% | |
| CCATCATTAGAGACTTCATT+AGG | - | chr1.4:1524446-1524465 | MS.gene90730:intron | 35.0% | |
| CCTAATGAAGTCTCTAATGA+TGG | + | chr1.4:1524449-1524468 | None:intergenic | 35.0% | |
| CGAGATGTTAAAGGAGATAA+GGG | - | chr1.4:1527317-1527336 | MS.gene90730:CDS | 35.0% | |
| CGGCAAACATTATGTATACA+TGG | + | chr1.4:1526262-1526281 | None:intergenic | 35.0% | |
| CTAGTGTAAAGTAGATGTCA+CGG | - | chr1.4:1524719-1524738 | MS.gene90730:intron | 35.0% | |
| CTTCATTAGGCATGTATTGA+AGG | - | chr1.4:1524459-1524478 | MS.gene90730:intron | 35.0% | |
| GAATCTGTACAACTTACCTA+CGG | + | chr1.4:1524064-1524083 | None:intergenic | 35.0% | |
| GCATTTCTAACAAGCTAATC+TGG | + | chr1.4:1524298-1524317 | None:intergenic | 35.0% | |
| GCCTCCCTTAACAAAATAAT+AGG | + | chr1.4:1526721-1526740 | None:intergenic | 35.0% | |
| GGTAATGTACTCTGTAACTA+AGG | - | chr1.4:1524145-1524164 | MS.gene90730:CDS | 35.0% | |
| TCCACATTTCCAACATAGAA+TGG | + | chr1.4:1523069-1523088 | None:intergenic | 35.0% | |
| TCCATTCTATGTTGGAAATG+TGG | - | chr1.4:1523065-1523084 | MS.gene90730:intron | 35.0% | |
| TTCTTCAACAATCAGAGAAG+GGG | - | chr1.4:1526127-1526146 | MS.gene90730:intron | 35.0% | |
| TTTGTCCAAGTGAAATTCGT+TGG | - | chr1.4:1525309-1525328 | MS.gene90730:CDS | 35.0% | |
| ! | ATGGCTCTGTTTGGATAAAT+AGG | - | chr1.4:1522479-1522498 | MS.gene90730:intron | 35.0% |
| ! | CCTCAAGTTTCTTTTCCTTT+GGG | + | chr1.4:1527079-1527098 | None:intergenic | 35.0% |
| ! | GCTTTTCAAATGCTAGAATC+CGG | - | chr1.4:1523356-1523375 | MS.gene90730:intron | 35.0% |
| ! | GGGAATTTGGTTCCTTTAAA+GGG | - | chr1.4:1526147-1526166 | MS.gene90730:intron | 35.0% |
| ! | GTTCGTATTTCTGTTCCTTT+AGG | - | chr1.4:1522427-1522446 | MS.gene90730:intron | 35.0% |
| ! | TACTTTTCATAGTACCCAGT+CGG | - | chr1.4:1527243-1527262 | MS.gene90730:CDS | 35.0% |
| ! | TATTTCTGTCCAAATCTCTC+TGG | - | chr1.4:1524597-1524616 | MS.gene90730:intron | 35.0% |
| ! | TCCTCAAGTTTCTTTTCCTT+TGG | + | chr1.4:1527080-1527099 | None:intergenic | 35.0% |
| ! | TGGCTCTGTTTGGATAAATA+GGG | - | chr1.4:1522480-1522499 | MS.gene90730:intron | 35.0% |
| ! | TTATTGCAGAAAGCGTATCA+TGG | - | chr1.4:1527290-1527309 | MS.gene90730:CDS | 35.0% |
| ! | TTTAAGACTAATCTAGCCGT+AGG | - | chr1.4:1524045-1524064 | MS.gene90730:intron | 35.0% |
| ! | TTTGATGTTATGGCTCTGTT+TGG | - | chr1.4:1522470-1522489 | MS.gene90730:intron | 35.0% |
| !! | AAAACCAAGCTCTGAAGTTT+CGG | - | chr1.4:1527028-1527047 | MS.gene90730:intron | 35.0% |
| !! | ACGGCTAGATTAGTCTTAAA+TGG | + | chr1.4:1524045-1524064 | None:intergenic | 35.0% |
| !! | GAATTGATGACAGTTTTGTC+CGG | + | chr1.4:1523378-1523397 | None:intergenic | 35.0% |
| !! | GGTACTCGTTTGATTAGTTT+GGG | + | chr1.4:1526087-1526106 | None:intergenic | 35.0% |
| !! | GTCAAGTGTGTCACTTAATA+TGG | + | chr1.4:1522873-1522892 | None:intergenic | 35.0% |
| !! | TGTTGATACAGTAGTTCTGA+AGG | + | chr1.4:1524180-1524199 | None:intergenic | 35.0% |
| !! | TTAGCTTGTTAGAAATGCCA+CGG | - | chr1.4:1524300-1524319 | MS.gene90730:intron | 35.0% |
| !! | TTCCTGGAAAGTATTAGTTG+TGG | - | chr1.4:1524209-1524228 | MS.gene90730:CDS | 35.0% |
| !! | TTGGATTTTGAGTCAAAAGC+AGG | - | chr1.4:1526434-1526453 | MS.gene90730:intron | 35.0% |
| !!! | GTGTTGGTTTTTCTAGTCAT+GGG | + | chr1.4:1526045-1526064 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCCTATTATGCCG+TGG | + | chr1.4:1524320-1524339 | None:intergenic | 35.0% |
| !!! | TACCTTTTGCTGTTCACTAT+TGG | + | chr1.4:1525957-1525976 | None:intergenic | 35.0% |
| !!! | TGTGTTGGTTTTTCTAGTCA+TGG | + | chr1.4:1526046-1526065 | None:intergenic | 35.0% |
| !!! | TGTTGGTTTTTCTAGTCATG+GGG | + | chr1.4:1526044-1526063 | None:intergenic | 35.0% |
| !!! | TTGTTACAGGTTTTGGTTCA+TGG | - | chr1.4:1524924-1524943 | MS.gene90730:intron | 35.0% |
| AACCACTCATCAACATTCCA+CGG | + | chr1.4:1525089-1525108 | None:intergenic | 40.0% | |
| ACAATCAGAGAAGGGGAATT+TGG | - | chr1.4:1526134-1526153 | MS.gene90730:intron | 40.0% | |
| ACAGTTGTGAAAAGCAAACG+GGG | - | chr1.4:1523873-1523892 | MS.gene90730:CDS | 40.0% | |
| ACTGAACTGGTGTGAACATT+AGG | - | chr1.4:1523320-1523339 | MS.gene90730:intron | 40.0% | |
| AGTAGGAAACTACATACCTC+TGG | + | chr1.4:1526660-1526679 | None:intergenic | 40.0% | |
| ATTATGAGAATTGGCAGCGA+TGG | - | chr1.4:1526990-1527009 | MS.gene90730:intron | 40.0% | |
| CAACAATGTATGGTCGTTCA+AGG | + | chr1.4:1526617-1526636 | None:intergenic | 40.0% | |
| CACAGTTGTGAAAAGCAAAC+GGG | - | chr1.4:1523872-1523891 | MS.gene90730:CDS | 40.0% | |
| CACCAATAGTGAACAGCAAA+AGG | - | chr1.4:1525952-1525971 | MS.gene90730:intron | 40.0% | |
| CATACATTTAGCCCCTGAAA+TGG | - | chr1.4:1526783-1526802 | MS.gene90730:intron | 40.0% | |
| CATGGTTAGCGAGATGTTAA+AGG | - | chr1.4:1527308-1527327 | MS.gene90730:CDS | 40.0% | |
| CCCAAAGGAAAAGAAACTTG+AGG | - | chr1.4:1527076-1527095 | MS.gene90730:intron | 40.0% | |
| CTAACTCCAATAACAGAGTG+AGG | + | chr1.4:1527113-1527132 | None:intergenic | 40.0% | |
| CTTACTTGATTGCATCTCTC+TGG | - | chr1.4:1524420-1524439 | MS.gene90730:intron | 40.0% | |
| GAAGATTGTGAAGGATAGTG+TGG | - | chr1.4:1525190-1525209 | MS.gene90730:intron | 40.0% | |
| GCACAGTTGTGAAAAGCAAA+CGG | - | chr1.4:1523871-1523890 | MS.gene90730:CDS | 40.0% | |
| GCGAGATGTTAAAGGAGATA+AGG | - | chr1.4:1527316-1527335 | MS.gene90730:CDS | 40.0% | |
| GGAACAGAAATACGAACAGT+AGG | + | chr1.4:1522424-1522443 | None:intergenic | 40.0% | |
| GTGAAAGACTGCTTTGTAGA+AGG | - | chr1.4:1525343-1525362 | MS.gene90730:CDS | 40.0% | |
| GTTGTACAGATTCACATTGG+TGG | - | chr1.4:1524071-1524090 | MS.gene90730:CDS | 40.0% | |
| GTTGTGGTTTACACCTATCT+TGG | - | chr1.4:1524225-1524244 | MS.gene90730:CDS | 40.0% | |
| TAACGTGATGAGAGATGACT+CGG | - | chr1.4:1524355-1524374 | MS.gene90730:intron | 40.0% | |
| TACAGCCAACGAATTTCACT+TGG | + | chr1.4:1525317-1525336 | None:intergenic | 40.0% | |
| TACTTGAAGTTGTGGGTGTT+TGG | - | chr1.4:1525873-1525892 | MS.gene90730:intron | 40.0% | |
| TAGAAATGCCACGGCATAAT+AGG | - | chr1.4:1524309-1524328 | MS.gene90730:intron | 40.0% | |
| TAGCTTAGATGGTAAAAGGC+TGG | - | chr1.4:1523156-1523175 | MS.gene90730:intron | 40.0% | |
| TATGGTCGTTCAAGGTAATC+AGG | + | chr1.4:1526609-1526628 | None:intergenic | 40.0% | |
| TCCCGTAAGTATAGCTTAGA+TGG | - | chr1.4:1523145-1523164 | MS.gene90730:intron | 40.0% | |
| TGATGAAGTTCTTGTTGCGA+GGG | - | chr1.4:1523926-1523945 | MS.gene90730:CDS | 40.0% | |
| TGCTTGGAAGGGAGTTTAAT+TGG | - | chr1.4:1526311-1526330 | MS.gene90730:intron | 40.0% | |
| TGGAGGGACATTTGATATGT+TGG | - | chr1.4:1523176-1523195 | MS.gene90730:intron | 40.0% | |
| TTAGATGGTAAAAGGCTGGA+GGG | - | chr1.4:1523160-1523179 | MS.gene90730:intron | 40.0% | |
| ! | CGGTACTCGTTTGATTAGTT+TGG | + | chr1.4:1526088-1526107 | None:intergenic | 40.0% |
| ! | GAAACTTCAGAGCTTGGTTT+TGG | + | chr1.4:1527029-1527048 | None:intergenic | 40.0% |
| ! | GGGGAATTTGGTTCCTTTAA+AGG | - | chr1.4:1526146-1526165 | MS.gene90730:intron | 40.0% |
| ! | GTATTCGTCTGAAGCTACAT+TGG | - | chr1.4:1525551-1525570 | MS.gene90730:intron | 40.0% |
| ! | GTTTCTACATCTAGAACCCA+AGG | - | chr1.4:1526814-1526833 | MS.gene90730:intron | 40.0% |
| ! | TGAACAGCAAAAGGTATGCT+AGG | - | chr1.4:1525961-1525980 | MS.gene90730:intron | 40.0% |
| !! | AAATTTTGACCTAAGCCGAC+TGG | + | chr1.4:1527261-1527280 | None:intergenic | 40.0% |
| !! | AATTTTGACCTAAGCCGACT+GGG | + | chr1.4:1527260-1527279 | None:intergenic | 40.0% |
| !! | CTTATAGAAGGTGCTCACTT+GGG | - | chr1.4:1525588-1525607 | MS.gene90730:intron | 40.0% |
| !! | CTTCCAATTAGTGGTGTTAC+AGG | - | chr1.4:1522617-1522636 | MS.gene90730:CDS | 40.0% |
| !! | GATGTGTTCTAAAGCATGAG+TGG | - | chr1.4:1525214-1525233 | MS.gene90730:intron | 40.0% |
| !! | GATTTGCCTGGTCTTATAGA+AGG | - | chr1.4:1525576-1525595 | MS.gene90730:intron | 40.0% |
| !! | GTGTGTCACTTAATATGGGA+CGG | + | chr1.4:1522868-1522887 | None:intergenic | 40.0% |
| !! | TCTTATAGAAGGTGCTCACT+TGG | - | chr1.4:1525587-1525606 | MS.gene90730:intron | 40.0% |
| !!! | GTCTTGGTCGCAATTTTTTG+AGG | - | chr1.4:1525710-1525729 | MS.gene90730:CDS | 40.0% |
| !!! | GTTGGTTTTTCTAGTCATGG+GGG | + | chr1.4:1526043-1526062 | None:intergenic | 40.0% |
| !!! | TTGGGATTTTTTGTGCGTTG+AGG | + | chr1.4:1526069-1526088 | None:intergenic | 40.0% |
| !!! | TTTTGGTTCATGGTCAACCT+GGG | - | chr1.4:1524934-1524953 | MS.gene90730:intron | 40.0% |
| AAACAGAGCCTCCCATTTCA+GGG | + | chr1.4:1526798-1526817 | None:intergenic | 45.0% | |
| ACTAGAAACCAACGGTTCCT+TGG | + | chr1.4:1527367-1527386 | None:intergenic | 45.0% | |
| AGGTTTAATGCGAAACGTGG+TGG | - | chr1.4:1522343-1522362 | MS.gene90730:CDS | 45.0% | |
| ATCAACGCACTGCCTTAAAG+CGG | + | chr1.4:1527343-1527362 | None:intergenic | 45.0% | |
| ATCATTGCGGAGTCTAGTGA+GGG | - | chr1.4:1526759-1526778 | MS.gene90730:intron | 45.0% | |
| ATGGTAAAGTAGACGCCATG+TGG | + | chr1.4:1526848-1526867 | None:intergenic | 45.0% | |
| CAGTAGATGCGTCAACAACA+TGG | + | chr1.4:1525762-1525781 | None:intergenic | 45.0% | |
| CGCAACAAGAACTTCATCAC+CGG | + | chr1.4:1523925-1523944 | None:intergenic | 45.0% | |
| CTAACCATACATGGCCAAAG+TGG | + | chr1.4:1523646-1523665 | None:intergenic | 45.0% | |
| CTCAGATTGAGGGTAGTAGT+AGG | + | chr1.4:1526677-1526696 | None:intergenic | 45.0% | |
| CTTACCACTTTGGCCATGTA+TGG | - | chr1.4:1523639-1523658 | MS.gene90730:intron | 45.0% | |
| CTTAGATGGTAAAAGGCTGG+AGG | - | chr1.4:1523159-1523178 | MS.gene90730:intron | 45.0% | |
| GAATAAGATTGACCTGCCAG+AGG | - | chr1.4:1526641-1526660 | MS.gene90730:intron | 45.0% | |
| GACTGAAGAAAGTGACCCAA+AGG | - | chr1.4:1527061-1527080 | MS.gene90730:intron | 45.0% | |
| GATGAAGTTCTTGTTGCGAG+GGG | - | chr1.4:1523927-1523946 | MS.gene90730:CDS | 45.0% | |
| GCAACAAGAACTTCATCACC+GGG | + | chr1.4:1523924-1523943 | None:intergenic | 45.0% | |
| GCACCTGTAACACCACTAAT+TGG | + | chr1.4:1522623-1522642 | None:intergenic | 45.0% | |
| GTCACTTAATATGGGACGGA+GGG | + | chr1.4:1522864-1522883 | None:intergenic | 45.0% | |
| GTGATGAAGTTCTTGTTGCG+AGG | - | chr1.4:1523925-1523944 | MS.gene90730:CDS | 45.0% | |
| TAATACGGAAGGGTGAGCTT+TGG | + | chr1.4:1526875-1526894 | None:intergenic | 45.0% | |
| TCACTAGACTCCGCAATGAT+GGG | + | chr1.4:1526759-1526778 | None:intergenic | 45.0% | |
| TGAGCACCTTCTATAAGACC+AGG | + | chr1.4:1525585-1525604 | None:intergenic | 45.0% | |
| TGTAGGGACTTCCAAATGCT+GGG | - | chr1.4:1525409-1525428 | MS.gene90730:intron | 45.0% | |
| TGTGGCACACTAGAAACCAA+CGG | + | chr1.4:1527375-1527394 | None:intergenic | 45.0% | |
| TTGTAGGGACTTCCAAATGC+TGG | - | chr1.4:1525408-1525427 | MS.gene90730:intron | 45.0% | |
| ! | AACCGTGGAATGTTGATGAG+TGG | - | chr1.4:1525084-1525103 | MS.gene90730:intron | 45.0% |
| ! | GATGAGAGATGACTCGGATA+AGG | - | chr1.4:1524361-1524380 | MS.gene90730:intron | 45.0% |
| ! | GGTGGTAATGTTGATGCTGT+TGG | - | chr1.4:1522361-1522380 | MS.gene90730:intron | 45.0% |
| ! | TGTCACTTAATATGGGACGG+AGG | + | chr1.4:1522865-1522884 | None:intergenic | 45.0% |
| ! | TTAGCTGATTTAGCACGACC+CGG | - | chr1.4:1523903-1523922 | MS.gene90730:CDS | 45.0% |
| ! | TTTGGTTCATGGTCAACCTG+GGG | - | chr1.4:1524935-1524954 | MS.gene90730:intron | 45.0% |
| ! | TTTTGTGCGTTGAGGTGTGT+TGG | + | chr1.4:1526061-1526080 | None:intergenic | 45.0% |
| !! | AGCGTTGATTTCCCAGCATT+TGG | + | chr1.4:1525423-1525442 | None:intergenic | 45.0% |
| !! | CTAGTGTTGCTTCTACGTGA+AGG | - | chr1.4:1522707-1522726 | MS.gene90730:intron | 45.0% |
| !! | CTTGATGGTGATCCCAACTT+GGG | - | chr1.4:1525519-1525538 | MS.gene90730:intron | 45.0% |
| !! | GTCTGCATCGTTTTTGCAGT+GGG | + | chr1.4:1526003-1526022 | None:intergenic | 45.0% |
| !! | TCTGCATCGTTTTTGCAGTG+GGG | + | chr1.4:1526002-1526021 | None:intergenic | 45.0% |
| !! | TGTCTGCATCGTTTTTGCAG+TGG | + | chr1.4:1526004-1526023 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTCATGGTCAACC+TGG | - | chr1.4:1524933-1524952 | MS.gene90730:intron | 45.0% |
| AACAACATGGACCAGTAGCC+GGG | + | chr1.4:1525749-1525768 | None:intergenic | 50.0% | |
| AACAGAGCCTCCCATTTCAG+GGG | + | chr1.4:1526797-1526816 | None:intergenic | 50.0% | |
| ACCTGGGGAGGAAGTTAAGT+TGG | - | chr1.4:1524950-1524969 | MS.gene90730:intron | 50.0% | |
| ATACATCCCTGCTCCCAAGT+TGG | + | chr1.4:1525535-1525554 | None:intergenic | 50.0% | |
| ATCGGGTTTCGCAAGCGTAA+TGG | + | chr1.4:1525454-1525473 | None:intergenic | 50.0% | |
| CAACAACATGGACCAGTAGC+CGG | + | chr1.4:1525750-1525769 | None:intergenic | 50.0% | |
| CATCATTGCGGAGTCTAGTG+AGG | - | chr1.4:1526758-1526777 | MS.gene90730:intron | 50.0% | |
| CATTTAGCCCCTGAAATGGG+AGG | - | chr1.4:1526787-1526806 | MS.gene90730:intron | 50.0% | |
| CCAAATCTTGGACGCCTTGA+TGG | - | chr1.4:1525504-1525523 | MS.gene90730:intron | 50.0% | |
| CCAATAACAGAGTGAGGTCG+TGG | + | chr1.4:1527107-1527126 | None:intergenic | 50.0% | |
| CCACGACCTCACTCTGTTAT+TGG | - | chr1.4:1527104-1527123 | MS.gene90730:intron | 50.0% | |
| CTCACTAGACTCCGCAATGA+TGG | + | chr1.4:1526760-1526779 | None:intergenic | 50.0% | |
| GAAACAGAGCCTCCCATTTC+AGG | + | chr1.4:1526799-1526818 | None:intergenic | 50.0% | |
| GCTACATTGGCAGATTTGCC+TGG | - | chr1.4:1525564-1525583 | MS.gene90730:intron | 50.0% | |
| GGAAACTACATACCTCTGGC+AGG | + | chr1.4:1526656-1526675 | None:intergenic | 50.0% | |
| TACATCCCTGCTCCCAAGTT+GGG | + | chr1.4:1525534-1525553 | None:intergenic | 50.0% | |
| TCCAACTTAACTTCCTCCCC+AGG | + | chr1.4:1524954-1524973 | None:intergenic | 50.0% | |
| TGAGCCGAAACTTCAGAGCT+TGG | + | chr1.4:1527035-1527054 | None:intergenic | 50.0% | |
| TGCTGGGAAATCAACGCTTC+TGG | - | chr1.4:1525425-1525444 | MS.gene90730:intron | 50.0% | |
| ! | AGGAGATAAGGGCCGCTTTA+AGG | - | chr1.4:1527328-1527347 | MS.gene90730:CDS | 50.0% |
| ! | CCAAGTTGGGATCACCATCA+AGG | + | chr1.4:1525521-1525540 | None:intergenic | 50.0% |
| ! | CCATCAAGGCGTCCAAGATT+TGG | + | chr1.4:1525507-1525526 | None:intergenic | 50.0% |
| ! | TCATAGTACCCAGTCGGCTT+AGG | - | chr1.4:1527249-1527268 | MS.gene90730:CDS | 50.0% |
| ! | TGAGGCATCTAAGAAGGACC+CGG | - | chr1.4:1525728-1525747 | MS.gene90730:CDS | 50.0% |
| !! | AAGGCAGTGCGTTGATTCCA+AGG | - | chr1.4:1527347-1527366 | MS.gene90730:CDS | 50.0% |
| !! | AGAAGGTGCTCACTTGGGAA+AGG | - | chr1.4:1525593-1525612 | MS.gene90730:intron | 50.0% |
| !! | CCTTGATGGTGATCCCAACT+TGG | - | chr1.4:1525518-1525537 | MS.gene90730:intron | 50.0% |
| !! | CGTTGATTCCAAGGAACCGT+TGG | - | chr1.4:1527356-1527375 | MS.gene90730:CDS | 50.0% |
| AAAGTAGACGCCATGTGGCG+AGG | + | chr1.4:1526843-1526862 | None:intergenic | 55.0% | |
| CTACGAGTTGTAGCCGACGT+TGG | - | chr1.4:1524981-1525000 | MS.gene90730:intron | 55.0% | |
| GAAGTTCTTGTTGCGAGGGG+TGG | - | chr1.4:1523930-1523949 | MS.gene90730:CDS | 55.0% | |
| GCATGAGGCTCCCATCATTG+CGG | - | chr1.4:1526746-1526765 | MS.gene90730:intron | 55.0% | |
| GTGATCCCAACTTGGGAGCA+GGG | - | chr1.4:1525526-1525545 | MS.gene90730:intron | 55.0% | |
| TAAGGGAGGCTCAGTGCATG+AGG | - | chr1.4:1526731-1526750 | MS.gene90730:intron | 55.0% | |
| TCTAAGAAGGACCCGGCTAC+TGG | - | chr1.4:1525735-1525754 | MS.gene90730:CDS | 55.0% | |
| ! | AAGGGTGAGCTTTGGCGCAA+TGG | + | chr1.4:1526867-1526886 | None:intergenic | 55.0% |
| ! | CAACGTCGGCTACAACTCGT+AGG | + | chr1.4:1524983-1525002 | None:intergenic | 55.0% |
| CTTGTTGCGAGGGGTGGACA+AGG | - | chr1.4:1523936-1523955 | MS.gene90730:intron | 60.0% | |
| GGTGATCCCAACTTGGGAGC+AGG | - | chr1.4:1525525-1525544 | MS.gene90730:intron | 60.0% | |
| GGTTCATGGTCAACCTGGGG+AGG | - | chr1.4:1524938-1524957 | MS.gene90730:intron | 60.0% | |
| TTGCGAGGGGTGGACAAGGA+GGG | - | chr1.4:1523940-1523959 | MS.gene90730:intron | 60.0% | |
| CCATGTGGCGAGGTGGCCTT+GGG | + | chr1.4:1526833-1526852 | None:intergenic | 65.0% | |
| GTAGACGCCATGTGGCGAGG+TGG | + | chr1.4:1526840-1526859 | None:intergenic | 65.0% | |
| GTTGCGAGGGGTGGACAAGG+AGG | - | chr1.4:1523939-1523958 | MS.gene90730:intron | 65.0% | |
| TGCGAGGGGTGGACAAGGAG+GGG | - | chr1.4:1523941-1523960 | MS.gene90730:intron | 65.0% | |
| CCCAAGGCCACCTCGCCACA+TGG | - | chr1.4:1526830-1526849 | MS.gene90730:intron | 70.0% | |
| GCCATGTGGCGAGGTGGCCT+TGG | + | chr1.4:1526834-1526853 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 1522265 | 1527398 | 1522265 | ID=MS.gene90730 |
| chr1.4 | mRNA | 1522265 | 1527398 | 1522265 | ID=MS.gene90730.t1;Parent=MS.gene90730 |
| chr1.4 | exon | 1527215 | 1527398 | 1527215 | ID=MS.gene90730.t1.exon1;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1527215 | 1527398 | 1527215 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1525701 | 1525792 | 1525701 | ID=MS.gene90730.t1.exon2;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1525701 | 1525792 | 1525701 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1525281 | 1525364 | 1525281 | ID=MS.gene90730.t1.exon3;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1525281 | 1525364 | 1525281 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1524653 | 1524730 | 1524653 | ID=MS.gene90730.t1.exon4;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1524653 | 1524730 | 1524653 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1524049 | 1524249 | 1524049 | ID=MS.gene90730.t1.exon5;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1524049 | 1524249 | 1524049 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1523847 | 1523954 | 1523847 | ID=MS.gene90730.t1.exon6;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1523847 | 1523954 | 1523847 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1523001 | 1523075 | 1523001 | ID=MS.gene90730.t1.exon7;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1523001 | 1523075 | 1523001 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1522525 | 1522706 | 1522525 | ID=MS.gene90730.t1.exon8;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1522525 | 1522706 | 1522525 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| chr1.4 | exon | 1522265 | 1522364 | 1522265 | ID=MS.gene90730.t1.exon9;Parent=MS.gene90730.t1 |
| chr1.4 | CDS | 1522265 | 1522364 | 1522265 | ID=cds.MS.gene90730.t1;Parent=MS.gene90730.t1 |
| Gene Sequence |
| Protein sequence |
