Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91157.t1 | XP_013447155.1 | 96.4 | 639 | 23 | 0 | 14 | 652 | 1 | 639 | 5.60E-290 | 1006.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91157.t1 | Q9SUQ3 | 65.7 | 642 | 196 | 9 | 16 | 646 | 7 | 635 | 1.4e-177 | 624.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91157.t1 | A0A072TUR7 | 96.4 | 639 | 23 | 0 | 14 | 652 | 1 | 639 | 4.0e-290 | 1006.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene91157 | 0.826297 | 2.93E-54 | -1.69E-46 |
| MS.gene049614 | MS.gene91157 | 0.807219 | 5.62E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene91157 | -0.806121 | 9.60E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene91157 | 0.811201 | 7.88E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene91157 | 0.815056 | 1.12E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene91157 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene91157 | 0.838813 | 2.30E-57 | -1.69E-46 |
| MS.gene051566 | MS.gene91157 | 0.809057 | 2.28E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene91157 | 0.808871 | 2.50E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene91157 | 0.834976 | 2.20E-56 | -1.69E-46 |
| MS.gene051810 | MS.gene91157 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene91157 | 0.845425 | 4.09E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene91157 | 0.823694 | 1.21E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene91157 | 0.836691 | 8.07E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene91157 | 0.823625 | 1.25E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene91157 | 0.827392 | 1.60E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene91157 | 0.825232 | 5.24E-54 | -1.69E-46 |
| MS.gene053018 | MS.gene91157 | 0.805385 | 1.37E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene91157 | 0.811368 | 7.25E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene91157 | 0.82787 | 1.23E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene91157 | -0.834451 | 2.98E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene91157 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene91157 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene91157 | 0.820529 | 6.54E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene91157 | 0.818301 | 2.10E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene91157 | 0.819526 | 1.11E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene91157 | 0.80339 | 3.57E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene91157 | -0.805969 | 1.03E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene91157 | 0.801904 | 7.22E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene91157 | 0.821234 | 4.50E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene91157 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene91157 | 0.833748 | 4.46E-56 | -1.69E-46 |
| MS.gene05592 | MS.gene91157 | 0.8149 | 1.22E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene91157 | 0.806249 | 9.02E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene91157 | 0.8051 | 1.57E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene91157 | 0.815361 | 9.62E-52 | -1.69E-46 |
| MS.gene056452 | MS.gene91157 | 0.825384 | 4.83E-54 | -1.69E-46 |
| MS.gene056942 | MS.gene91157 | 0.839228 | 1.80E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene91157 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene91157 | 0.806688 | 7.28E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene91157 | 0.802141 | 6.46E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene91157 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene058588 | MS.gene91157 | 0.805661 | 1.20E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene91157 | -0.843186 | 1.64E-58 | -1.69E-46 |
| MS.gene059029 | MS.gene91157 | 0.814046 | 1.88E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene91157 | 0.842164 | 3.06E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene91157 | 0.846888 | 1.64E-59 | -1.69E-46 |
| MS.gene06046 | MS.gene91157 | 0.884947 | 1.24E-71 | -1.69E-46 |
| MS.gene060482 | MS.gene91157 | 0.818475 | 1.92E-52 | -1.69E-46 |
| MS.gene06074 | MS.gene91157 | -0.808383 | 3.18E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene91157 | 0.811497 | 6.80E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene91157 | 0.817066 | 4.00E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene91157 | 0.838905 | 2.18E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 145 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAAATAATTCTCTTTC+TGG | 0.064689 | 4.2:-4869481 | MS.gene91157:CDS |
| GTTCTTCTGTTTGTGATAAT+TGG | 0.130995 | 4.2:-4869840 | MS.gene91157:CDS |
| CTTCAGTTCAATAATTTATC+TGG | 0.152351 | 4.2:-4869622 | MS.gene91157:CDS |
| TACCATAAGTTTCTCATCTT+TGG | 0.158004 | 4.2:+4868811 | None:intergenic |
| CTTAGATCCAATTTAATATC+TGG | 0.184428 | 4.2:-4869694 | MS.gene91157:CDS |
| TTACCTGGTGTTGGATTTAA+TGG | 0.202015 | 4.2:-4869769 | MS.gene91157:CDS |
| AACATTTGGTACTGCTTATA+AGG | 0.261175 | 4.2:-4868975 | MS.gene91157:CDS |
| TATGCGTATTGTTGTGTATA+TGG | 0.266539 | 4.2:-4869954 | MS.gene91157:CDS |
| TATTCATTTCTCAAGGTTAC+AGG | 0.271554 | 4.2:-4869446 | MS.gene91157:CDS |
| GAAAGGTTACTAATAGTATT+TGG | 0.276690 | 4.2:+4869736 | None:intergenic |
| ATTTGTTGGAAAGTCGAATA+AGG | 0.279483 | 4.2:-4869131 | MS.gene91157:CDS |
| ACCATCTCTTCTTCTATGTT+TGG | 0.287391 | 4.2:+4867470 | None:intergenic |
| CACCTTCAAGGACTTTGAAT+TGG | 0.296460 | 4.2:-4869870 | MS.gene91157:CDS |
| TCTAATTTGACTCAGCTTGC+TGG | 0.297299 | 4.2:-4869511 | MS.gene91157:CDS |
| TTTCTCAATTCTAAACAATA+TGG | 0.300824 | 4.2:-4867773 | MS.gene91157:CDS |
| AAAACCTCTTTATCTTCAAC+AGG | 0.313257 | 4.2:+4869916 | None:intergenic |
| GAGAGCTTCTGCTGAGGTGC+TGG | 0.322314 | 4.2:-4869005 | MS.gene91157:CDS |
| AAACTACTTGAAGTGGAAAA+AGG | 0.323072 | 4.2:-4869997 | MS.gene91157:CDS |
| GGAAATCTCAGTAATGATTT+AGG | 0.329452 | 4.2:+4869385 | None:intergenic |
| TTCCTTGTGTCTGTAACTTC+AGG | 0.340687 | 4.2:+4867671 | None:intergenic |
| CTTTGCCTGATTTCTCAGTT+TGG | 0.353461 | 4.2:-4869597 | MS.gene91157:CDS |
| TGTGTGGATGGGCGATTTCC+CGG | 0.355236 | 4.2:+4867592 | None:intergenic |
| TATGATGATGATGCATTTGT+TGG | 0.358905 | 4.2:-4869145 | MS.gene91157:CDS |
| AACCTTGAGAAATGAATATC+AGG | 0.362363 | 4.2:+4869451 | None:intergenic |
| TAGGGCAAGTGAGGTTGATA+TGG | 0.363969 | 4.2:+4867724 | None:intergenic |
| TTGTCTAACAATGATTTAGA+AGG | 0.367467 | 4.2:-4869415 | MS.gene91157:CDS |
| GTGTAATTATGCATTTGATT+TGG | 0.370580 | 4.2:-4869038 | MS.gene91157:CDS |
| CCTTCCGATGTTTACAGCTT+TGG | 0.376086 | 4.2:-4867638 | MS.gene91157:CDS |
| TGAACAAGTTTCCACCTTCA+AGG | 0.381417 | 4.2:-4869882 | MS.gene91157:CDS |
| TTACTTGGGATTGTAGCATT+TGG | 0.382493 | 4.2:-4869211 | MS.gene91157:CDS |
| TTCCCAACAAATGCCGAATC+AGG | 0.382846 | 4.2:+4869364 | None:intergenic |
| AGTATTGTTGGTAGTTTACT+TGG | 0.383806 | 4.2:-4869226 | MS.gene91157:CDS |
| CTCAAAATCCTTCTTTCCTA+AGG | 0.390823 | 4.2:+4868901 | None:intergenic |
| TAATAAACTGACTTTCTTTG+AGG | 0.409485 | 4.2:-4869062 | MS.gene91157:CDS |
| GTGCTGGGAAAGGGAACATT+TGG | 0.411675 | 4.2:-4868989 | MS.gene91157:CDS |
| TTCCAAAGATGAGAAACTTA+TGG | 0.419459 | 4.2:-4868813 | MS.gene91157:CDS |
| TTCTTCCAAACTGAGAAATC+AGG | 0.420006 | 4.2:+4869592 | None:intergenic |
| AGGACAAGGTGCCATTAGAT+TGG | 0.420460 | 4.2:-4867901 | MS.gene91157:CDS |
| TTAGATCCAATTTAATATCT+GGG | 0.426208 | 4.2:-4869693 | MS.gene91157:CDS |
| ACTCGGTTGAGAATAGCTTT+AGG | 0.427720 | 4.2:-4867875 | MS.gene91157:CDS |
| AATAAACTGACTTTCTTTGA+GGG | 0.432127 | 4.2:-4869061 | MS.gene91157:CDS |
| ATCACCACCGGTTGTGTGGA+TGG | 0.433475 | 4.2:+4867580 | None:intergenic |
| GCTAAGTGAAACAGCACTGC+TGG | 0.434019 | 4.2:-4869254 | MS.gene91157:CDS |
| CTGCTGGGAATTAGTATTGT+TGG | 0.434540 | 4.2:-4869238 | MS.gene91157:CDS |
| TTCACAACTTCTGACATCTT+AGG | 0.437254 | 4.2:+4867395 | None:intergenic |
| TTGTCTAACAACAAATTCAA+TGG | 0.437684 | 4.2:-4869553 | MS.gene91157:CDS |
| ATTACTGAGATTTCCTGATT+CGG | 0.441976 | 4.2:-4869377 | MS.gene91157:CDS |
| AACTTCAGGTGCTCGGTAAC+CGG | 0.444642 | 4.2:+4867685 | None:intergenic |
| GAGCAATATATGGAGATTGT+TGG | 0.445329 | 4.2:-4868881 | MS.gene91157:CDS |
| TTCCTGATTCGGCATTTGTT+GGG | 0.448825 | 4.2:-4869366 | MS.gene91157:CDS |
| TTCCAATTCAAAGTCCTTGA+AGG | 0.451341 | 4.2:+4869868 | None:intergenic |
| GTAACCGGCCGCGCGTGAGA+TGG | 0.454374 | 4.2:+4867700 | None:intergenic |
| GCTATTCGTTTACCTGGTGT+TGG | 0.454969 | 4.2:-4869778 | MS.gene91157:CDS |
| CTCGAAGAAGGCTCATAAAC+CGG | 0.458928 | 4.2:+4869295 | None:intergenic |
| TAATTATGCATTTGATTTGG+AGG | 0.460683 | 4.2:-4869035 | MS.gene91157:CDS |
| TTCAGTTCAATAATTTATCT+GGG | 0.461857 | 4.2:-4869621 | MS.gene91157:CDS |
| TTTGTTGGAAAGTCGAATAA+GGG | 0.464394 | 4.2:-4869130 | MS.gene91157:CDS |
| TATGGCTGTGTATCTGATCT+TGG | 0.465318 | 4.2:-4867755 | MS.gene91157:CDS |
| AGAATTGAGAAAGATATTTG+AGG | 0.465869 | 4.2:+4867784 | None:intergenic |
| GTTGGGAATAACATTACTCT+AGG | 0.465986 | 4.2:-4869349 | MS.gene91157:CDS |
| ATGAGAATTTCAGGGAAAAG+AGG | 0.471282 | 4.2:-4867926 | MS.gene91157:intron |
| AACCGAGTATCCCAATCTAA+TGG | 0.472741 | 4.2:+4867890 | None:intergenic |
| AGATCATTCACTTGGTGAGA+TGG | 0.473981 | 4.2:-4867556 | MS.gene91157:CDS |
| GGAAGTAGCCTTAGGAAAGA+AGG | 0.474361 | 4.2:-4868909 | MS.gene91157:CDS |
| CCTCCTTGATTCTCAGATGA+TGG | 0.474874 | 4.2:+4867329 | None:intergenic |
| TGACCCTGTTGAAGATAAAG+AGG | 0.476973 | 4.2:-4869920 | MS.gene91157:CDS |
| TCTGTTTGTGATAATTGGAC+TGG | 0.477768 | 4.2:-4869835 | MS.gene91157:CDS |
| AGTGTCTCTTCTTTGTTGCA+TGG | 0.483641 | 4.2:-4868767 | MS.gene91157:intron |
| TTCTGCTGAGGTGCTGGGAA+AGG | 0.484409 | 4.2:-4868999 | MS.gene91157:CDS |
| TAACCGGCCGCGCGTGAGAT+GGG | 0.485648 | 4.2:+4867701 | None:intergenic |
| TCTGCTGAGGTGCTGGGAAA+GGG | 0.487632 | 4.2:-4868998 | MS.gene91157:CDS |
| GACATCTTAGGCCTCTGATC+AGG | 0.488318 | 4.2:+4867407 | None:intergenic |
| AAATCGCCCATCCACACAAC+CGG | 0.488844 | 4.2:-4867587 | MS.gene91157:CDS |
| AGATTGAAGGAAGTAGCCTT+AGG | 0.490595 | 4.2:-4868917 | MS.gene91157:CDS |
| GTGTTACTTGCAATGAAGAT+AGG | 0.491269 | 4.2:-4869813 | MS.gene91157:CDS |
| GATCATTCACTTGGTGAGAT+GGG | 0.493328 | 4.2:-4867555 | MS.gene91157:CDS |
| TTTCCTGATTCGGCATTTGT+TGG | 0.495372 | 4.2:-4869367 | MS.gene91157:CDS |
| GGACAAGGTGCCATTAGATT+GGG | 0.508875 | 4.2:-4867900 | MS.gene91157:CDS |
| ATTGCAGAAACTACTTGAAG+TGG | 0.509572 | 4.2:-4870004 | MS.gene91157:CDS |
| TCACCACCGGTTGTGTGGAT+GGG | 0.511038 | 4.2:+4867581 | None:intergenic |
| GTATTACTAGAGCTTCTGAC+CGG | 0.511963 | 4.2:-4867611 | MS.gene91157:CDS |
| GTTATAGCTATTCGTTTACC+TGG | 0.517517 | 4.2:-4869784 | MS.gene91157:CDS |
| CGGCCGCGCGTGAGATGGGT+AGG | 0.519525 | 4.2:+4867705 | None:intergenic |
| TGTTTCGCCTGTGCTTTCGC+CGG | 0.521688 | 4.2:-4869314 | MS.gene91157:CDS |
| GCTCAAATCCATGTCGAGAA+TGG | 0.523276 | 4.2:-4867836 | MS.gene91157:CDS |
| TCATAAACCGGCGAAAGCAC+AGG | 0.524017 | 4.2:+4869307 | None:intergenic |
| TTCCTGATATTCATTTCTCA+AGG | 0.526883 | 4.2:-4869453 | MS.gene91157:CDS |
| CAGCCATCATCTGAGAATCA+AGG | 0.528028 | 4.2:-4867332 | MS.gene91157:CDS |
| CTTCGGCCGTCCACTCCTCT+CGG | 0.529755 | 4.2:+4867519 | None:intergenic |
| CTACCCATCTCACGCGCGGC+CGG | 0.530610 | 4.2:-4867704 | MS.gene91157:CDS |
| CGGTTTATGAGCCTTCTTCG+AGG | 0.531583 | 4.2:-4869294 | MS.gene91157:CDS |
| AGAGCTTCTGCTGAGGTGCT+GGG | 0.540710 | 4.2:-4869004 | MS.gene91157:CDS |
| CGTTTCTCAGACCTCGAAGA+AGG | 0.542660 | 4.2:+4869283 | None:intergenic |
| TGCCATTAGATTGGGATACT+CGG | 0.545730 | 4.2:-4867892 | MS.gene91157:CDS |
| CAGAAAGAGAATTATTTGCA+AGG | 0.553080 | 4.2:+4869482 | None:intergenic |
| GTATTGTTGGTAGTTTACTT+GGG | 0.554199 | 4.2:-4869225 | MS.gene91157:CDS |
| TGCTTATAAGGCGATTCTTG+AGG | 0.555190 | 4.2:-4868963 | MS.gene91157:CDS |
| AGGGAAAAGAGGAGAGGACA+AGG | 0.555244 | 4.2:-4867915 | MS.gene91157:CDS |
| AAAAGCAGTTTCGAGGAACA+TGG | 0.557721 | 4.2:-4869092 | MS.gene91157:CDS |
| CTAAGTGAAACAGCACTGCT+GGG | 0.570553 | 4.2:-4869253 | MS.gene91157:CDS |
| TGAGAATGTAGTTGAGCTCA+AGG | 0.573073 | 4.2:-4868846 | MS.gene91157:CDS |
| CAATTCAAAGTCCTTGAAGG+TGG | 0.577153 | 4.2:+4869871 | None:intergenic |
| TTGAGGACTTGATGTTGCCA+TGG | 0.579701 | 4.2:+4867801 | None:intergenic |
| AGGTTACTAATAGTATTTGG+TGG | 0.582558 | 4.2:+4869739 | None:intergenic |
| ATTCAGTTGTCCGAGAGGAG+TGG | 0.583733 | 4.2:-4867529 | MS.gene91157:CDS |
| ATAAACTGACTTTCTTTGAG+GGG | 0.591015 | 4.2:-4869060 | MS.gene91157:CDS |
| TGTCTGTAACTTCAGGTGCT+CGG | 0.591977 | 4.2:+4867678 | None:intergenic |
| TCCAAACATAGAAGAAGAGA+TGG | 0.594545 | 4.2:-4867471 | MS.gene91157:CDS |
| GTCAAATTAGAGAGCGAAAG+CGG | 0.597009 | 4.2:+4869523 | None:intergenic |
| TCAGAATTTCAAGAGCTGAA+AGG | 0.597819 | 4.2:+4869719 | None:intergenic |
| TATTACTAGAGCTTCTGACC+GGG | 0.597983 | 4.2:-4867610 | MS.gene91157:CDS |
| TTTGTTGAGAGCTTCTGCTG+AGG | 0.599980 | 4.2:-4869011 | MS.gene91157:CDS |
| GTTTACCGCCATTCTCGACA+TGG | 0.600016 | 4.2:+4867828 | None:intergenic |
| GGCCGCGCGTGAGATGGGTA+GGG | 0.601953 | 4.2:+4867706 | None:intergenic |
| CACCTGAAGTTACAGACACA+AGG | 0.602591 | 4.2:-4867673 | MS.gene91157:CDS |
| GTGAATGATCTCATCACCAC+CGG | 0.603856 | 4.2:+4867568 | None:intergenic |
| CCAAAGCTGTAAACATCGGA+AGG | 0.604118 | 4.2:+4867638 | None:intergenic |
| GGTTGTTGTGAAGAGATTGA+AGG | 0.615357 | 4.2:-4868930 | MS.gene91157:CDS |
| TGAGATGGGTAGGGCAAGTG+AGG | 0.623595 | 4.2:+4867715 | None:intergenic |
| TCTCATCACCACCGGTTGTG+TGG | 0.624590 | 4.2:+4867576 | None:intergenic |
| GTATATGATTACTACAGCCG+AGG | 0.625000 | 4.2:-4868791 | MS.gene91157:CDS |
| TCTTCGAGGTCTGAGAAACG+TGG | 0.625116 | 4.2:-4869280 | MS.gene91157:CDS |
| AATGGCGGTAAACTTGTCCA+TGG | 0.625338 | 4.2:-4867818 | MS.gene91157:CDS |
| CTTCGAGGTCTGAGAAACGT+GGG | 0.643381 | 4.2:-4869279 | MS.gene91157:CDS |
| GTAAACATCGGAAGGTTGTG+CGG | 0.644794 | 4.2:+4867646 | None:intergenic |
| CAACTCTAAGTCAAACACTT+CGG | 0.645648 | 4.2:+4867502 | None:intergenic |
| ACAAAGAAGAGACACTCCCT+CGG | 0.646888 | 4.2:+4868774 | None:intergenic |
| AGTTGTCCGAGAGGAGTGGA+CGG | 0.652835 | 4.2:-4867525 | MS.gene91157:CDS |
| CAAATCCATGTCGAGAATGG+CGG | 0.657401 | 4.2:-4867833 | MS.gene91157:CDS |
| GGTTCATTCAGTTGTCCGAG+AGG | 0.661987 | 4.2:-4867534 | MS.gene91157:CDS |
| TCGCCCATCCACACAACCGG+TGG | 0.663361 | 4.2:-4867584 | MS.gene91157:CDS |
| TTGCCATTAAATCCAACACC+AGG | 0.664373 | 4.2:+4869766 | None:intergenic |
| GATTCTTGAGGACGCGACTG+CGG | 0.668930 | 4.2:-4868951 | MS.gene91157:CDS |
| ATAGCTTTAGGTGCAGCAAG+AGG | 0.671199 | 4.2:-4867863 | MS.gene91157:CDS |
| AACGCCAAAGCTGTAAACAT+CGG | 0.671248 | 4.2:+4867634 | None:intergenic |
| CGAGGTCTGAGAAACGTGGG+AGG | 0.675795 | 4.2:-4869276 | MS.gene91157:CDS |
| TGCCCTACCCATCTCACGCG+CGG | 0.677597 | 4.2:-4867708 | MS.gene91157:CDS |
| AATTTCAGGGAAAAGAGGAG+AGG | 0.677730 | 4.2:-4867921 | MS.gene91157:intron |
| TATATGATTACTACAGCCGA+GGG | 0.681402 | 4.2:-4868790 | MS.gene91157:CDS |
| AAACCTCTTTATCTTCAACA+GGG | 0.686853 | 4.2:+4869917 | None:intergenic |
| TGGTGATGAGATCATTCACT+TGG | 0.690340 | 4.2:-4867564 | MS.gene91157:CDS |
| TGGTAAGAATGCCTGATCAG+AGG | 0.693311 | 4.2:-4867418 | MS.gene91157:CDS |
| GCAGATAGCTATGTCATGTG+TGG | 0.721419 | 4.2:-4867438 | MS.gene91157:CDS |
| GTATTGTTGTGTATATGGCA+AGG | 0.722730 | 4.2:-4869949 | MS.gene91157:CDS |
| CCATCATCTGAGAATCAAGG+AGG | 0.749831 | 4.2:-4867329 | MS.gene91157:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCCATTTTAATGATATTA+TGG | + | chr4.2:4868909-4868928 | None:intergenic | 15.0% |
| !!! | TGTTTTTCATGAAAAAAAAA+AGG | - | chr4.2:4868614-4868633 | MS.gene91157:intron | 15.0% |
| !! | AAAAAACCCAGATATTAAAT+TGG | + | chr4.2:4867574-4867593 | None:intergenic | 20.0% |
| !! | GCAATTTCATATATTTACTA+CGG | - | chr4.2:4868538-4868557 | MS.gene91157:intron | 20.0% |
| !! | TAAATATATGAAATTGCAAC+TGG | + | chr4.2:4868535-4868554 | None:intergenic | 20.0% |
| !! | TTAGATCCAATTTAATATCT+GGG | - | chr4.2:4867565-4867584 | MS.gene91157:CDS | 20.0% |
| !! | TTCAGTTCAATAATTTATCT+GGG | - | chr4.2:4867637-4867656 | MS.gene91157:CDS | 20.0% |
| !! | TTGAAGTTTGAAAATATAGT+TGG | - | chr4.2:4868747-4868766 | MS.gene91157:intron | 20.0% |
| !! | TTTCTCAATTCTAAACAATA+TGG | - | chr4.2:4869485-4869504 | MS.gene91157:CDS | 20.0% |
| !!! | AAAAGACAAGTTTTTTAGAT+TGG | + | chr4.2:4867610-4867629 | None:intergenic | 20.0% |
| !!! | AAGATAAGTTTTTCCATAAA+TGG | - | chr4.2:4869230-4869249 | MS.gene91157:CDS | 20.0% |
| !!! | ATTAGGAATATCTACATTTT+AGG | - | chr4.2:4868883-4868902 | MS.gene91157:CDS | 20.0% |
| ! | AGAATTGAGAAAGATATTTG+AGG | + | chr4.2:4869477-4869496 | None:intergenic | 25.0% |
| ! | AGGCCATAATATCATTAAAA+TGG | - | chr4.2:4868903-4868922 | MS.gene91157:CDS | 25.0% |
| ! | ATTGCAACTGGTTAAAATAA+AGG | + | chr4.2:4868523-4868542 | None:intergenic | 25.0% |
| ! | CTTAGATCCAATTTAATATC+TGG | - | chr4.2:4867564-4867583 | MS.gene91157:CDS | 25.0% |
| ! | CTTCAGTTCAATAATTTATC+TGG | - | chr4.2:4867636-4867655 | MS.gene91157:CDS | 25.0% |
| ! | GAAAGGTTACTAATAGTATT+TGG | + | chr4.2:4867525-4867544 | None:intergenic | 25.0% |
| ! | GTAGCTACTAACAATTAAAT+GGG | - | chr4.2:4868705-4868724 | MS.gene91157:intron | 25.0% |
| ! | GTGTAATTATGCATTTGATT+TGG | - | chr4.2:4868220-4868239 | MS.gene91157:intron | 25.0% |
| ! | TGTAGCTACTAACAATTAAA+TGG | - | chr4.2:4868704-4868723 | MS.gene91157:intron | 25.0% |
| ! | TTATGACAAGTTTCCATTTA+TGG | + | chr4.2:4869246-4869265 | None:intergenic | 25.0% |
| ! | TTCCATGATGTTTATTATCA+TGG | + | chr4.2:4869149-4869168 | None:intergenic | 25.0% |
| ! | TTGTCTAACAACAAATTCAA+TGG | - | chr4.2:4867705-4867724 | MS.gene91157:CDS | 25.0% |
| ! | TTGTCTAACAATGATTTAGA+AGG | - | chr4.2:4867843-4867862 | MS.gene91157:CDS | 25.0% |
| ! | TTTAGATTGGAAAAATCAGA+AGG | + | chr4.2:4867597-4867616 | None:intergenic | 25.0% |
| ! | TTTGCTTTATGAGAATTTCA+GGG | - | chr4.2:4869324-4869343 | MS.gene91157:CDS | 25.0% |
| !! | AATAAACTGACTTTCTTTGA+GGG | - | chr4.2:4868197-4868216 | MS.gene91157:intron | 25.0% |
| !! | TAATAAACTGACTTTCTTTG+AGG | - | chr4.2:4868196-4868215 | MS.gene91157:intron | 25.0% |
| !! | TACATGTTTTCAGAAACATT+AGG | - | chr4.2:4868866-4868885 | MS.gene91157:CDS | 25.0% |
| !! | TCATTAAAATGGATTTGATG+TGG | - | chr4.2:4868914-4868933 | MS.gene91157:CDS | 25.0% |
| !! | TTTTGCTTTATGAGAATTTC+AGG | - | chr4.2:4869323-4869342 | MS.gene91157:CDS | 25.0% |
| !!! | TAATTATGCATTTGATTTGG+AGG | - | chr4.2:4868223-4868242 | MS.gene91157:intron | 25.0% |
| AAAACCTCTTTATCTTCAAC+AGG | + | chr4.2:4867345-4867364 | None:intergenic | 30.0% | |
| AAACCTCTTTATCTTCAACA+GGG | + | chr4.2:4867344-4867363 | None:intergenic | 30.0% | |
| AAACTACTTGAAGTGGAAAA+AGG | - | chr4.2:4867261-4867280 | MS.gene91157:CDS | 30.0% | |
| AACATTTGGTACTGCTTATA+AGG | - | chr4.2:4868283-4868302 | MS.gene91157:intron | 30.0% | |
| AACCTTGAGAAATGAATATC+AGG | + | chr4.2:4867810-4867829 | None:intergenic | 30.0% | |
| AGGTTACTAATAGTATTTGG+TGG | + | chr4.2:4867522-4867541 | None:intergenic | 30.0% | |
| ATTACTGAGATTTCCTGATT+CGG | - | chr4.2:4867881-4867900 | MS.gene91157:CDS | 30.0% | |
| CAGAAAGAGAATTATTTGCA+AGG | + | chr4.2:4867779-4867798 | None:intergenic | 30.0% | |
| CATGATGTTTATTATCATGG+AGG | + | chr4.2:4869146-4869165 | None:intergenic | 30.0% | |
| CTCCATGATAATAAACATCA+TGG | - | chr4.2:4869144-4869163 | MS.gene91157:CDS | 30.0% | |
| CTTGCAAATAATTCTCTTTC+TGG | - | chr4.2:4867777-4867796 | MS.gene91157:CDS | 30.0% | |
| GAAGTTCACAATCTTACATA+GGG | - | chr4.2:4869166-4869185 | MS.gene91157:CDS | 30.0% | |
| GGAAATCTCAGTAATGATTT+AGG | + | chr4.2:4867876-4867895 | None:intergenic | 30.0% | |
| GTGCTTATTTCATATGTCTA+TGG | - | chr4.2:4868588-4868607 | MS.gene91157:intron | 30.0% | |
| GTTCTTCTGTTTGTGATAAT+TGG | - | chr4.2:4867418-4867437 | MS.gene91157:CDS | 30.0% | |
| TACCATAAGTTTCTCATCTT+TGG | + | chr4.2:4868450-4868469 | None:intergenic | 30.0% | |
| TATGCGTATTGTTGTGTATA+TGG | - | chr4.2:4867304-4867323 | MS.gene91157:CDS | 30.0% | |
| TATTCATTTCTCAAGGTTAC+AGG | - | chr4.2:4867812-4867831 | MS.gene91157:CDS | 30.0% | |
| TTCCAAAGATGAGAAACTTA+TGG | - | chr4.2:4868445-4868464 | MS.gene91157:intron | 30.0% | |
| TTCCTGATATTCATTTCTCA+AGG | - | chr4.2:4867805-4867824 | MS.gene91157:CDS | 30.0% | |
| TTTGTTGGAAAGTCGAATAA+GGG | - | chr4.2:4868128-4868147 | MS.gene91157:intron | 30.0% | |
| ! | ATAAACTGACTTTCTTTGAG+GGG | - | chr4.2:4868198-4868217 | MS.gene91157:intron | 30.0% |
| ! | ATTTGTTGGAAAGTCGAATA+AGG | - | chr4.2:4868127-4868146 | MS.gene91157:intron | 30.0% |
| ! | GAAGGATTTTGAGCAATATA+TGG | - | chr4.2:4868367-4868386 | MS.gene91157:intron | 30.0% |
| ! | TATGATGATGATGCATTTGT+TGG | - | chr4.2:4868113-4868132 | MS.gene91157:intron | 30.0% |
| !! | AGTATTGTTGGTAGTTTACT+TGG | - | chr4.2:4868032-4868051 | MS.gene91157:intron | 30.0% |
| !! | GTATTGTTGGTAGTTTACTT+GGG | - | chr4.2:4868033-4868052 | MS.gene91157:intron | 30.0% |
| ACCATCTCTTCTTCTATGTT+TGG | + | chr4.2:4869791-4869810 | None:intergenic | 35.0% | |
| ACTTCGACAAATTGAGTACT+CGG | + | chr4.2:4869001-4869020 | None:intergenic | 35.0% | |
| ATGAGAATTTCAGGGAAAAG+AGG | - | chr4.2:4869332-4869351 | MS.gene91157:CDS | 35.0% | |
| ATTGCAGAAACTACTTGAAG+TGG | - | chr4.2:4867254-4867273 | MS.gene91157:CDS | 35.0% | |
| CAACTCTAAGTCAAACACTT+CGG | + | chr4.2:4869759-4869778 | None:intergenic | 35.0% | |
| CTCAAAATCCTTCTTTCCTA+AGG | + | chr4.2:4868360-4868379 | None:intergenic | 35.0% | |
| GAATAAGGGAAAAATGTCTC+CGG | - | chr4.2:4868142-4868161 | MS.gene91157:intron | 35.0% | |
| GAGCAATATATGGAGATTGT+TGG | - | chr4.2:4868377-4868396 | MS.gene91157:intron | 35.0% | |
| GGAAGTTCACAATCTTACAT+AGG | - | chr4.2:4869165-4869184 | MS.gene91157:CDS | 35.0% | |
| GTATTGTTGTGTATATGGCA+AGG | - | chr4.2:4867309-4867328 | MS.gene91157:CDS | 35.0% | |
| GTTATAGCTATTCGTTTACC+TGG | - | chr4.2:4867474-4867493 | MS.gene91157:CDS | 35.0% | |
| GTTGGGAATAACATTACTCT+AGG | - | chr4.2:4867909-4867928 | MS.gene91157:CDS | 35.0% | |
| TATATGATTACTACAGCCGA+GGG | - | chr4.2:4868468-4868487 | MS.gene91157:intron | 35.0% | |
| TCAGAATTTCAAGAGCTGAA+AGG | + | chr4.2:4867542-4867561 | None:intergenic | 35.0% | |
| TCCAAACATAGAAGAAGAGA+TGG | - | chr4.2:4869787-4869806 | MS.gene91157:CDS | 35.0% | |
| TCTGTTTGTGATAATTGGAC+TGG | - | chr4.2:4867423-4867442 | MS.gene91157:CDS | 35.0% | |
| TTACTTGGGATTGTAGCATT+TGG | - | chr4.2:4868047-4868066 | MS.gene91157:intron | 35.0% | |
| TTCACAACTTCTGACATCTT+AGG | + | chr4.2:4869866-4869885 | None:intergenic | 35.0% | |
| TTCCAATTCAAAGTCCTTGA+AGG | + | chr4.2:4867393-4867412 | None:intergenic | 35.0% | |
| TTCTTCCAAACTGAGAAATC+AGG | + | chr4.2:4867669-4867688 | None:intergenic | 35.0% | |
| ! | AACAATCTCTGTAGTTGATG+AGG | - | chr4.2:4868959-4868978 | MS.gene91157:CDS | 35.0% |
| ! | ATTCACTTCCTTTTGGTAAG+GGG | + | chr4.2:4870015-4870034 | None:intergenic | 35.0% |
| ! | CATTCACTTCCTTTTGGTAA+GGG | + | chr4.2:4870016-4870035 | None:intergenic | 35.0% |
| ! | TCATTCACTTCCTTTTGGTA+AGG | + | chr4.2:4870017-4870036 | None:intergenic | 35.0% |
| ! | TTACCTGGTGTTGGATTTAA+TGG | - | chr4.2:4867489-4867508 | MS.gene91157:CDS | 35.0% |
| !! | GTGTTACTTGCAATGAAGAT+AGG | - | chr4.2:4867445-4867464 | MS.gene91157:CDS | 35.0% |
| AAAAGCAGTTTCGAGGAACA+TGG | - | chr4.2:4868166-4868185 | MS.gene91157:intron | 40.0% | |
| AACCGAGTATCCCAATCTAA+TGG | + | chr4.2:4869371-4869390 | None:intergenic | 40.0% | |
| AACGCCAAAGCTGTAAACAT+CGG | + | chr4.2:4869627-4869646 | None:intergenic | 40.0% | |
| AATTTCAGGGAAAAGAGGAG+AGG | - | chr4.2:4869337-4869356 | MS.gene91157:CDS | 40.0% | |
| ACTCGGTTGAGAATAGCTTT+AGG | - | chr4.2:4869383-4869402 | MS.gene91157:CDS | 40.0% | |
| AGATTGAAGGAAGTAGCCTT+AGG | - | chr4.2:4868341-4868360 | MS.gene91157:intron | 40.0% | |
| AGTGTCTCTTCTTTGTTGCA+TGG | - | chr4.2:4868491-4868510 | MS.gene91157:intron | 40.0% | |
| CAATTCAAAGTCCTTGAAGG+TGG | + | chr4.2:4867390-4867409 | None:intergenic | 40.0% | |
| CACCTTCAAGGACTTTGAAT+TGG | - | chr4.2:4867388-4867407 | MS.gene91157:CDS | 40.0% | |
| CTGCTGGGAATTAGTATTGT+TGG | - | chr4.2:4868020-4868039 | MS.gene91157:intron | 40.0% | |
| CTTTGCCTGATTTCTCAGTT+TGG | - | chr4.2:4867661-4867680 | MS.gene91157:CDS | 40.0% | |
| GAGTACTCAATTTGTCGAAG+TGG | - | chr4.2:4869000-4869019 | MS.gene91157:CDS | 40.0% | |
| GGTTGTTGTGAAGAGATTGA+AGG | - | chr4.2:4868328-4868347 | MS.gene91157:intron | 40.0% | |
| GTATATGATTACTACAGCCG+AGG | - | chr4.2:4868467-4868486 | MS.gene91157:intron | 40.0% | |
| GTATTACTAGAGCTTCTGAC+CGG | - | chr4.2:4869647-4869666 | MS.gene91157:CDS | 40.0% | |
| GTCAAATTAGAGAGCGAAAG+CGG | + | chr4.2:4867738-4867757 | None:intergenic | 40.0% | |
| TATGGCTGTGTATCTGATCT+TGG | - | chr4.2:4869503-4869522 | MS.gene91157:CDS | 40.0% | |
| TATTACTAGAGCTTCTGACC+GGG | - | chr4.2:4869648-4869667 | MS.gene91157:CDS | 40.0% | |
| TCTAATTTGACTCAGCTTGC+TGG | - | chr4.2:4867747-4867766 | MS.gene91157:CDS | 40.0% | |
| TGAACAAGTTTCCACCTTCA+AGG | - | chr4.2:4867376-4867395 | MS.gene91157:CDS | 40.0% | |
| TGACCCTGTTGAAGATAAAG+AGG | - | chr4.2:4867338-4867357 | MS.gene91157:CDS | 40.0% | |
| TGAGAATGTAGTTGAGCTCA+AGG | - | chr4.2:4868412-4868431 | MS.gene91157:intron | 40.0% | |
| TGCCATTAGATTGGGATACT+CGG | - | chr4.2:4869366-4869385 | MS.gene91157:CDS | 40.0% | |
| TGCTTATAAGGCGATTCTTG+AGG | - | chr4.2:4868295-4868314 | MS.gene91157:intron | 40.0% | |
| TTCCTTGTGTCTGTAACTTC+AGG | + | chr4.2:4869590-4869609 | None:intergenic | 40.0% | |
| TTGCCATTAAATCCAACACC+AGG | + | chr4.2:4867495-4867514 | None:intergenic | 40.0% | |
| ! | AGATCATTCACTTGGTGAGA+TGG | - | chr4.2:4869702-4869721 | MS.gene91157:CDS | 40.0% |
| ! | GATCATTCACTTGGTGAGAT+GGG | - | chr4.2:4869703-4869722 | MS.gene91157:CDS | 40.0% |
| ! | TGGTGATGAGATCATTCACT+TGG | - | chr4.2:4869694-4869713 | MS.gene91157:CDS | 40.0% |
| ! | TTCACTTCCTTTTGGTAAGG+GGG | + | chr4.2:4870014-4870033 | None:intergenic | 40.0% |
| !! | GTGTTGCTGCTCTAGAAAAA+AGG | - | chr4.2:4868085-4868104 | MS.gene91157:intron | 40.0% |
| !! | TCTCTGTAGTTGATGAGGAT+AGG | - | chr4.2:4868964-4868983 | MS.gene91157:CDS | 40.0% |
| !! | TTCCTGATTCGGCATTTGTT+GGG | - | chr4.2:4867892-4867911 | MS.gene91157:CDS | 40.0% |
| !! | TTTCCTGATTCGGCATTTGT+TGG | - | chr4.2:4867891-4867910 | MS.gene91157:CDS | 40.0% |
| !!! | TTCCTCGAAACTGCTTTTTC+CGG | + | chr4.2:4868164-4868183 | None:intergenic | 40.0% |
| AATGGCGGTAAACTTGTCCA+TGG | - | chr4.2:4869440-4869459 | MS.gene91157:CDS | 45.0% | |
| ACAAAGAAGAGACACTCCCT+CGG | + | chr4.2:4868487-4868506 | None:intergenic | 45.0% | |
| ACTTCATCCCCCTTACCAAA+AGG | - | chr4.2:4870004-4870023 | MS.gene91157:CDS | 45.0% | |
| CAAATCCATGTCGAGAATGG+CGG | - | chr4.2:4869425-4869444 | MS.gene91157:CDS | 45.0% | |
| CACCTGAAGTTACAGACACA+AGG | - | chr4.2:4869585-4869604 | MS.gene91157:CDS | 45.0% | |
| CAGCCATCATCTGAGAATCA+AGG | - | chr4.2:4869926-4869945 | MS.gene91157:CDS | 45.0% | |
| CCAAAGCTGTAAACATCGGA+AGG | + | chr4.2:4869623-4869642 | None:intergenic | 45.0% | |
| CCATCATCTGAGAATCAAGG+AGG | - | chr4.2:4869929-4869948 | MS.gene91157:CDS | 45.0% | |
| CCTCCTTGATTCTCAGATGA+TGG | + | chr4.2:4869932-4869951 | None:intergenic | 45.0% | |
| CCTTCCGATGTTTACAGCTT+TGG | - | chr4.2:4869620-4869639 | MS.gene91157:CDS | 45.0% | |
| CTAAGTGAAACAGCACTGCT+GGG | - | chr4.2:4868005-4868024 | MS.gene91157:intron | 45.0% | |
| CTCGAAGAAGGCTCATAAAC+CGG | + | chr4.2:4867966-4867985 | None:intergenic | 45.0% | |
| GCAGATAGCTATGTCATGTG+TGG | - | chr4.2:4869820-4869839 | MS.gene91157:CDS | 45.0% | |
| GCTATTCGTTTACCTGGTGT+TGG | - | chr4.2:4867480-4867499 | MS.gene91157:CDS | 45.0% | |
| GCTCAAATCCATGTCGAGAA+TGG | - | chr4.2:4869422-4869441 | MS.gene91157:CDS | 45.0% | |
| GTAAACATCGGAAGGTTGTG+CGG | + | chr4.2:4869615-4869634 | None:intergenic | 45.0% | |
| GTGAATGATCTCATCACCAC+CGG | + | chr4.2:4869693-4869712 | None:intergenic | 45.0% | |
| TGGTAAGAATGCCTGATCAG+AGG | - | chr4.2:4869840-4869859 | MS.gene91157:CDS | 45.0% | |
| TGTCTGTAACTTCAGGTGCT+CGG | + | chr4.2:4869583-4869602 | None:intergenic | 45.0% | |
| TTCCCAACAAATGCCGAATC+AGG | + | chr4.2:4867897-4867916 | None:intergenic | 45.0% | |
| TTGAGGACTTGATGTTGCCA+TGG | + | chr4.2:4869460-4869479 | None:intergenic | 45.0% | |
| TTTGTTGAGAGCTTCTGCTG+AGG | - | chr4.2:4868247-4868266 | MS.gene91157:intron | 45.0% | |
| ! | GGAAGTAGCCTTAGGAAAGA+AGG | - | chr4.2:4868349-4868368 | MS.gene91157:intron | 45.0% |
| ! | TTTTGGTAAGGGGGATGAAG+TGG | + | chr4.2:4870005-4870024 | None:intergenic | 45.0% |
| !! | AGGACAAGGTGCCATTAGAT+TGG | - | chr4.2:4869357-4869376 | MS.gene91157:CDS | 45.0% |
| !! | ATAGCTTTAGGTGCAGCAAG+AGG | - | chr4.2:4869395-4869414 | MS.gene91157:CDS | 45.0% |
| !! | GGACAAGGTGCCATTAGATT+GGG | - | chr4.2:4869358-4869377 | MS.gene91157:CDS | 45.0% |
| !! | TAGGGCAAGTGAGGTTGATA+TGG | + | chr4.2:4869537-4869556 | None:intergenic | 45.0% |
| AAATCGCCCATCCACACAAC+CGG | - | chr4.2:4869671-4869690 | MS.gene91157:CDS | 50.0% | |
| AACTTCAGGTGCTCGGTAAC+CGG | + | chr4.2:4869576-4869595 | None:intergenic | 50.0% | |
| AAGGGGGATGAAGTGGAAGA+AGG | + | chr4.2:4869998-4870017 | None:intergenic | 50.0% | |
| AGGGAAAAGAGGAGAGGACA+AGG | - | chr4.2:4869343-4869362 | MS.gene91157:CDS | 50.0% | |
| AGGGGGATGAAGTGGAAGAA+GGG | + | chr4.2:4869997-4870016 | None:intergenic | 50.0% | |
| ATTCAGTTGTCCGAGAGGAG+TGG | - | chr4.2:4869729-4869748 | MS.gene91157:CDS | 50.0% | |
| CGGTTTATGAGCCTTCTTCG+AGG | - | chr4.2:4867964-4867983 | MS.gene91157:intron | 50.0% | |
| CGTTTCTCAGACCTCGAAGA+AGG | + | chr4.2:4867978-4867997 | None:intergenic | 50.0% | |
| CTCCGGAAAAAGCAGTTTCG+AGG | - | chr4.2:4868159-4868178 | MS.gene91157:intron | 50.0% | |
| CTTCGAGGTCTGAGAAACGT+GGG | - | chr4.2:4867979-4867998 | MS.gene91157:intron | 50.0% | |
| GACATCTTAGGCCTCTGATC+AGG | + | chr4.2:4869854-4869873 | None:intergenic | 50.0% | |
| GCTAAGTGAAACAGCACTGC+TGG | - | chr4.2:4868004-4868023 | MS.gene91157:intron | 50.0% | |
| GGTTCATTCAGTTGTCCGAG+AGG | - | chr4.2:4869724-4869743 | MS.gene91157:CDS | 50.0% | |
| GTGCTGGGAAAGGGAACATT+TGG | - | chr4.2:4868269-4868288 | MS.gene91157:intron | 50.0% | |
| GTTTACCGCCATTCTCGACA+TGG | + | chr4.2:4869433-4869452 | None:intergenic | 50.0% | |
| TCTTCGAGGTCTGAGAAACG+TGG | - | chr4.2:4867978-4867997 | MS.gene91157:intron | 50.0% | |
| TGACTGACTGCAGTGACTGT+GGG | - | chr4.2:4869061-4869080 | MS.gene91157:CDS | 50.0% | |
| TTGACTGACTGCAGTGACTG+TGG | - | chr4.2:4869060-4869079 | MS.gene91157:CDS | 50.0% | |
| ! | TCATAAACCGGCGAAAGCAC+AGG | + | chr4.2:4867954-4867973 | None:intergenic | 50.0% |
| AGTTGTCCGAGAGGAGTGGA+CGG | - | chr4.2:4869733-4869752 | MS.gene91157:CDS | 55.0% | |
| GATTCTTGAGGACGCGACTG+CGG | - | chr4.2:4868307-4868326 | MS.gene91157:intron | 55.0% | |
| GGGGGATGAAGTGGAAGAAG+GGG | + | chr4.2:4869996-4870015 | None:intergenic | 55.0% | |
| TGAGATGGGTAGGGCAAGTG+AGG | + | chr4.2:4869546-4869565 | None:intergenic | 55.0% | |
| TGTGTGGATGGGCGATTTCC+CGG | + | chr4.2:4869669-4869688 | None:intergenic | 55.0% | |
| TGTTTCGCCTGTGCTTTCGC+CGG | - | chr4.2:4867944-4867963 | MS.gene91157:intron | 55.0% | |
| ! | AGAGCTTCTGCTGAGGTGCT+GGG | - | chr4.2:4868254-4868273 | MS.gene91157:intron | 55.0% |
| ! | ATCACCACCGGTTGTGTGGA+TGG | + | chr4.2:4869681-4869700 | None:intergenic | 55.0% |
| ! | TCACCACCGGTTGTGTGGAT+GGG | + | chr4.2:4869680-4869699 | None:intergenic | 55.0% |
| ! | TCTCATCACCACCGGTTGTG+TGG | + | chr4.2:4869685-4869704 | None:intergenic | 55.0% |
| !! | TCTGCTGAGGTGCTGGGAAA+GGG | - | chr4.2:4868260-4868279 | MS.gene91157:intron | 55.0% |
| !! | TTCTGCTGAGGTGCTGGGAA+AGG | - | chr4.2:4868259-4868278 | MS.gene91157:intron | 55.0% |
| CGAGGTCTGAGAAACGTGGG+AGG | - | chr4.2:4867982-4868001 | MS.gene91157:intron | 60.0% | |
| GAGAGCTTCTGCTGAGGTGC+TGG | - | chr4.2:4868253-4868272 | MS.gene91157:intron | 60.0% | |
| CTTCGGCCGTCCACTCCTCT+CGG | + | chr4.2:4869742-4869761 | None:intergenic | 65.0% | |
| TAACCGGCCGCGCGTGAGAT+GGG | + | chr4.2:4869560-4869579 | None:intergenic | 65.0% | |
| TCGCCCATCCACACAACCGG+TGG | - | chr4.2:4869674-4869693 | MS.gene91157:CDS | 65.0% | |
| TGCCCTACCCATCTCACGCG+CGG | - | chr4.2:4869550-4869569 | MS.gene91157:CDS | 65.0% | |
| CTACCCATCTCACGCGCGGC+CGG | - | chr4.2:4869554-4869573 | MS.gene91157:CDS | 70.0% | |
| GGCCGCGCGTGAGATGGGTA+GGG | + | chr4.2:4869555-4869574 | None:intergenic | 70.0% | |
| GTAACCGGCCGCGCGTGAGA+TGG | + | chr4.2:4869561-4869580 | None:intergenic | 70.0% | |
| CGGCCGCGCGTGAGATGGGT+AGG | + | chr4.2:4869556-4869575 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 4867244 | 4870036 | 4867244 | ID=MS.gene91157 |
| chr4.2 | mRNA | 4867244 | 4870036 | 4867244 | ID=MS.gene91157.t1;Parent=MS.gene91157 |
| chr4.2 | exon | 4868768 | 4870036 | 4868768 | ID=MS.gene91157.t1.exon1;Parent=MS.gene91157.t1 |
| chr4.2 | CDS | 4868768 | 4870036 | 4868768 | ID=cds.MS.gene91157.t1;Parent=MS.gene91157.t1 |
| chr4.2 | exon | 4867244 | 4867935 | 4867244 | ID=MS.gene91157.t1.exon2;Parent=MS.gene91157.t1 |
| chr4.2 | CDS | 4867244 | 4867935 | 4867244 | ID=cds.MS.gene91157.t1;Parent=MS.gene91157.t1 |
| Gene Sequence |
| Protein sequence |
